BLASTP 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Reference for composition-based statistics starting in round 2:
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,
Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005.
Query= O14732
(288 letters)
Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta
36,641 sequences; 10,336,785 total letters
Searching..................................................done
Results from round 1
Score E
Sequences producing significant alignments: (bits) Value
2CZH-A nrPDB 591 e-169
2BJI-A nrPDB 344 2e-95
4AS5-A nrPDB 341 3e-94
1IMD-A nrPDB 340 4e-94
6IB8-A nrPDB 149 1e-36
5ZHH-A nrPDB 130 6e-31
2P3V-A nrPDB 127 8e-30
2PCR-A nrPDB 123 7e-29
3LV0-A nrPDB 123 1e-28
5J16-A nrPDB 117 4e-27
1G0H-A nrPDB 93 2e-19
2Q74-A nrPDB 92 3e-19
1XI6-A nrPDB 87 1e-17
1VDW-A nrPDB 86 3e-17
3QMF-A nrPDB 78 5e-15
5YHT-A nrPDB 76 2e-14
5EQA-A nrPDB 75 3e-14
1JP4-A nrPDB 60 1e-09
1LBZ-A nrPDB 56 2e-08
4O7I-A nrPDB 55 4e-08
3B8B-A nrPDB 54 7e-08
2WEF-A nrPDB 54 8e-08
4N81-A nrPDB 49 2e-06
4QXD-A nrPDB 48 6e-06
5ESY-A nrPDB 45 4e-05
1KA0-A nrPDB 42 2e-04
5DJK-A nrPDB 32 0.30
6AAE-A nrPDB 31 0.60
3KRZ-A nrPDB 28 5.5
4MH4-A nrPDB 27 8.1
>2CZH-A nrPDB
Length = 299
Score = 591 bits (1523), Expect = e-169, Method: Compositional matrix adjust.
Identities = 288/288 (100%), Positives = 288/288 (100%)
Query: 1 MKPSGEDQAALAAGPWEECFQAAVQLALRAGQIIRKALTEEKRVSTKTSAADLVTETDHL 60
MKPSGEDQAALAAGPWEECFQAAVQLALRAGQIIRKALTEEKRVSTKTSAADLVTETDHL
Sbjct: 12 MKPSGEDQAALAAGPWEECFQAAVQLALRAGQIIRKALTEEKRVSTKTSAADLVTETDHL 71
Query: 61 VEDLIISELRERFPSHRFIAEEAAASGAKCVLTHSPTWIIDPIDGTCNFVHRFPTVAVSI 120
VEDLIISELRERFPSHRFIAEEAAASGAKCVLTHSPTWIIDPIDGTCNFVHRFPTVAVSI
Sbjct: 72 VEDLIISELRERFPSHRFIAEEAAASGAKCVLTHSPTWIIDPIDGTCNFVHRFPTVAVSI 131
Query: 121 GFAVRQELEFGVIYHCTEERLYTGRRGRGAFCNGQRLRVSGETDLSKALVLTEIGPKRDP 180
GFAVRQELEFGVIYHCTEERLYTGRRGRGAFCNGQRLRVSGETDLSKALVLTEIGPKRDP
Sbjct: 132 GFAVRQELEFGVIYHCTEERLYTGRRGRGAFCNGQRLRVSGETDLSKALVLTEIGPKRDP 191
Query: 181 ATLKLFLSNMERLLHAKAHGVRVIGSSTLALCHLASGAADAYYQFGLHCWDLAAATVIIR 240
ATLKLFLSNMERLLHAKAHGVRVIGSSTLALCHLASGAADAYYQFGLHCWDLAAATVIIR
Sbjct: 192 ATLKLFLSNMERLLHAKAHGVRVIGSSTLALCHLASGAADAYYQFGLHCWDLAAATVIIR 251
Query: 241 EAGGIVIDTSGGPLDLMACRVVAASTREMAMLIAQALQTINYGRDDEK 288
EAGGIVIDTSGGPLDLMACRVVAASTREMAMLIAQALQTINYGRDDEK
Sbjct: 252 EAGGIVIDTSGGPLDLMACRVVAASTREMAMLIAQALQTINYGRDDEK 299
>2BJI-A nrPDB
Length = 277
Score = 344 bits (883), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 148/275 (53%), Positives = 213/275 (77%)
Query: 13 AGPWEECFQAAVQLALRAGQIIRKALTEEKRVSTKTSAADLVTETDHLVEDLIISELRER 72
A PW+EC AV LA +AG+++R+AL E + K+S ADLVT TD VE ++I+ ++E+
Sbjct: 2 ADPWQECMDYAVTLAGQAGEVVREALKNEMNIMVKSSPADLVTATDQKVEKMLITSIKEK 61
Query: 73 FPSHRFIAEEAAASGAKCVLTHSPTWIIDPIDGTCNFVHRFPTVAVSIGFAVRQELEFGV 132
+PSH FI EE+ A+G K +LT +PTWIIDPIDGT NFVH FP VAVSIGF V +++EFG+
Sbjct: 62 YPSHSFIGEESVAAGEKSILTDNPTWIIDPIDGTTNFVHGFPFVAVSIGFVVNKKMEFGI 121
Query: 133 IYHCTEERLYTGRRGRGAFCNGQRLRVSGETDLSKALVLTEIGPKRDPATLKLFLSNMER 192
+Y C E+++YTGR+G+GAFCNGQ+L+VS + D++K+L++TE+G R P T+++ LSN+ER
Sbjct: 122 VYSCLEDKMYTGRKGKGAFCNGQKLQVSHQEDITKSLLVTELGSSRTPETVRIILSNIER 181
Query: 193 LLHAKAHGVRVIGSSTLALCHLASGAADAYYQFGLHCWDLAAATVIIREAGGIVIDTSGG 252
LL HG+R +G++ L +C +A+GAADAYY+ G+HCWD+A A +I+ EAGG+++D +GG
Sbjct: 182 LLCLPIHGIRGVGTAALNMCLVAAGAADAYYEMGIHCWDVAGAGIIVTEAGGVLLDVTGG 241
Query: 253 PLDLMACRVVAASTREMAMLIAQALQTINYGRDDE 287
P DLM+ RV+A+S + +A IA+ +Q I RDDE
Sbjct: 242 PFDLMSRRVIASSNKTLAERIAKEIQIIPLQRDDE 276
>4AS5-A nrPDB
Length = 277
Score = 341 bits (874), Expect = 3e-94, Method: Compositional matrix adjust.
Identities = 146/275 (53%), Positives = 209/275 (76%)
Query: 13 AGPWEECFQAAVQLALRAGQIIRKALTEEKRVSTKTSAADLVTETDHLVEDLIISELRER 72
A PW+EC AV LA +AG++IR+AL E V K+S ADLVT TD VE +++S ++E+
Sbjct: 2 ADPWQECMDYAVILARQAGEMIREALKNEMDVMIKSSPADLVTVTDQKVEKMLMSSIKEK 61
Query: 73 FPSHRFIAEEAAASGAKCVLTHSPTWIIDPIDGTCNFVHRFPTVAVSIGFAVRQELEFGV 132
+P H FI EE+ A+G K V T PTW+IDPIDGT NFVHRFP VAVSIGF V +E+EFG+
Sbjct: 62 YPCHSFIGEESVAAGEKTVFTEQPTWVIDPIDGTTNFVHRFPFVAVSIGFLVNKEMEFGI 121
Query: 133 IYHCTEERLYTGRRGRGAFCNGQRLRVSGETDLSKALVLTEIGPKRDPATLKLFLSNMER 192
+Y C E+++YTGR+G+GAFCNGQ+L+VS + D++K+L++TE+G R P TL++ LSNME+
Sbjct: 122 VYSCVEDKMYTGRKGKGAFCNGQKLQVSQQEDITKSLLVTELGSSRKPETLRIVLSNMEK 181
Query: 193 LLHAKAHGVRVIGSSTLALCHLASGAADAYYQFGLHCWDLAAATVIIREAGGIVIDTSGG 252
L HG+R +G++ + +C +A+G ADAYY+ G+HCWD+A A +I+ EAGG+++D +GG
Sbjct: 182 LCSIPIHGIRSVGTAAVNMCLVATGGADAYYEMGIHCWDMAGAGIIVTEAGGVLMDVTGG 241
Query: 253 PLDLMACRVVAASTREMAMLIAQALQTINYGRDDE 287
P DLM+ R++AA++ +A IA+ ++ I RDDE
Sbjct: 242 PFDLMSRRIIAANSITLAKRIAKEIEIIPLQRDDE 276
>1IMD-A nrPDB
Length = 277
Score = 340 bits (873), Expect = 4e-94, Method: Compositional matrix adjust.
Identities = 147/275 (53%), Positives = 209/275 (76%)
Query: 13 AGPWEECFQAAVQLALRAGQIIRKALTEEKRVSTKTSAADLVTETDHLVEDLIISELRER 72
A PW+EC AV LA +AG+++ +A+ E V K+S DLVT TD VE ++IS ++E+
Sbjct: 2 ADPWQECMDYAVTLARQAGEVVCEAIKNEMNVMLKSSPVDLVTATDQKVEKMLISSIKEK 61
Query: 73 FPSHRFIAEEAAASGAKCVLTHSPTWIIDPIDGTCNFVHRFPTVAVSIGFAVRQELEFGV 132
+PSH FI EE+ A+G K +LT +PTWIIDPIDGT NFVHRFP VAVSIGFAV +++EFGV
Sbjct: 62 YPSHSFIGEESVAAGEKSILTDNPTWIIDPIDGTTNFVHRFPFVAVSIGFAVNKKIEFGV 121
Query: 133 IYHCTEERLYTGRRGRGAFCNGQRLRVSGETDLSKALVLTEIGPKRDPATLKLFLSNMER 192
+Y C E ++YT R+G+GAFCNGQ+L+VS + D++K+L++TE+G R P T+++ LSNME+
Sbjct: 122 VYSCVEGKMYTARKGKGAFCNGQKLQVSQQEDITKSLLVTELGSSRTPETVRMVLSNMEK 181
Query: 193 LLHAKAHGVRVIGSSTLALCHLASGAADAYYQFGLHCWDLAAATVIIREAGGIVIDTSGG 252
L HG+R +G++ + +C +A+G ADAYY+ G+HCWD+A A +I+ EAGG+++D +GG
Sbjct: 182 LFCIPVHGIRSVGTAAVNMCLVATGGADAYYEMGIHCWDVAGAGIIVTEAGGVLMDVTGG 241
Query: 253 PLDLMACRVVAASTREMAMLIAQALQTINYGRDDE 287
P DLM+ RV+AA+ R +A IA+ +Q I RDDE
Sbjct: 242 PFDLMSRRVIAANNRILAERIAKEIQVIPLQRDDE 276
>6IB8-A nrPDB
Length = 271
Score = 149 bits (376), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 87/254 (34%), Positives = 134/254 (52%), Gaps = 6/254 (2%)
Query: 23 AVQLALRAGQIIRKAL-TEEKRVSTKTSAADLVTETDHLVEDLIISELRERFPSHRFIAE 81
AV+ A +AG +I K T + +++ + D VT D E +II +R+ +P H I E
Sbjct: 12 AVRAARKAGNLIAKNYETPDAVEASQKGSNDFVTNVDKAAEAVIIDTIRKSYPQHTIITE 71
Query: 82 EAAASGAKCVLTHSPTWIIDPIDGTCNFVHRFPTVAVSIGFAVRQELEFGVIYHCTEERL 141
E SG W+IDP+DGT NF+ R P AVSI ++ E V+Y L
Sbjct: 72 E---SGELEGTDQDVQWVIDPLDGTTNFIKRLPHFAVSIAVRIKGRTEVAVVYDPMRNEL 128
Query: 142 YTGRRGRGAFCNGQRLRVSGETDLSKALVLTEIGPKRDPATLKLFLSNMERLLHAKAHGV 201
+T RG+GA NG RLR S DL ++ T P + +++ + +L + A
Sbjct: 129 FTATRGQGAQLNGYRLRGSTARDLDGTILATGF-PFKAKQYATTYINIVGKLFNECAD-F 186
Query: 202 RVIGSSTLALCHLASGAADAYYQFGLHCWDLAAATVIIREAGGIVIDTSGGPLDLMACRV 261
R GS+ L L ++A+G D +++ GL WD AA +++REAGGIV D +GG ++ +
Sbjct: 187 RRTGSAALDLAYVAAGRVDGFFEIGLRPWDFAAGELLVREAGGIVSDFTGGHNYMLTGNI 246
Query: 262 VAASTREMAMLIAQ 275
VA + R + ++A
Sbjct: 247 VAGNPRVVKAMLAN 260
>5ZHH-A nrPDB
Length = 270
Score = 130 bits (327), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 75/225 (33%), Positives = 116/225 (51%), Gaps = 5/225 (2%)
Query: 41 EKRVSTKTSAADLVTETDHLVEDLIISELRERFPSHRFIAEEAAASGAKCVLTHSPTWII 100
E ++ K DLVT D E +++ +R FP H +AEE+ G + + W I
Sbjct: 30 EDAITEKGRPGDLVTAADKASEAVVLEIIRRHFPQHSILAEESGKLGNQ---DNEYLWAI 86
Query: 101 DPIDGTCNFVHRFPTVAVSIGFAVRQELEFGVIYHCTEERLYTGRRGRGAFCNGQRLRVS 160
DP+DGT N+ H++P VSIG + + GVIY + L+ G G GA N + ++VS
Sbjct: 87 DPLDGTTNYAHQYPAFCVSIGLLINGVPQVGVIYDPFHDELFRGAAGLGATRNRRPIKVS 146
Query: 161 GETDLSKALVLTEIGPKRDPATLKLFLSNMERLLHAKAHGVRVIGSSTLALCHLASGAAD 220
++LSK+L++T R + + L H GVR GS+ L L H+A G D
Sbjct: 147 DTSELSKSLLVTGFAYDRRETPDNNY-AEFCHLTHL-TQGVRRSGSAALDLAHVACGRVD 204
Query: 221 AYYQFGLHCWDLAAATVIIREAGGIVIDTSGGPLDLMACRVVAAS 265
Y++ G+ WD+ A +++ EAGG V PL + R++A +
Sbjct: 205 GYWERGISPWDVVAGVILLEEAGGKVTAYDSTPLKIATGRILATN 249
>2P3V-A nrPDB
Length = 256
Score = 127 bits (318), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 77/230 (33%), Positives = 122/230 (53%), Gaps = 16/230 (6%)
Query: 23 AVQLALRAGQIIRKALTEEKRVSTKTSAADLVTETDHLVEDLIISELRERFPSHRFIAEE 82
+++L + G ++ V KT D+VTE D + +I+ E+R+ FP +AEE
Sbjct: 7 SIKLLRKVGHLLMIHWGRVDNVEKKTGFKDIVTEIDREAQRMIVDEIRKFFPDENIMAEE 66
Query: 83 AAASGAKCVLTHSPTWIIDPIDGTCNFVHRFPTVAVSIGFAVRQELEFGVIYH-CTEERL 141
+ WIIDPIDGT NFVH P ++S+ + E++ GV++ E L
Sbjct: 67 GIFEKGDRL------WIIDPIDGTINFVHGLPNFSISLAYVENGEVKLGVVHAPALNETL 120
Query: 142 YTGRRGRGAFCNGQRLRVSGETDLSKALVLTEIGPKRDPATLKLFLSNMERLLHAKAHGV 201
Y G GAF NG+R+RVS L + + T G D T K F+ ME+ + +
Sbjct: 121 YA-EEGSGAFFNGERIRVSENASLEECVGST--GSYVD-FTGK-FIERMEK----RTRRI 171
Query: 202 RVIGSSTLALCHLASGAADAYYQFGLHCWDLAAATVIIREAGGIVIDTSG 251
R++GS+ L ++ +G D + + ++ WD+AA +I++EAGG+V D SG
Sbjct: 172 RILGSAALNAAYVGAGRVDFFVTWRINPWDIAAGLIIVKEAGGMVTDFSG 221
>2PCR-A nrPDB
Length = 264
Score = 123 bits (309), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 68/220 (30%), Positives = 115/220 (52%), Gaps = 7/220 (3%)
Query: 27 ALRAGQIIRKALTEEKRVSTKTSA-ADLVTETDHLVEDLIISELRERFPSHRFIAEEAAA 85
AL GQ++++ + K+ + + D V+ D E+ I + + FP H + EE A
Sbjct: 15 ALAGGQVLKENFGKVKKENIEEKGEKDFVSYVDKTSEERIKEVILKFFPDHEVVGEEMGA 74
Query: 86 SGAKCVLTHSPTWIIDPIDGTCNFVHRFPTVAVSIGFAVRQELEFGVIYHCTEERLYTGR 145
G+ W IDP+DGT N+++ FP AVS+G +E G +Y ++LY G
Sbjct: 75 EGSGS----EYRWFIDPLDGTKNYINGFPIFAVSVGLVKGEEPIVGAVYLPYFDKLYWGA 130
Query: 146 RGRGAFCNGQRLRVSGETDLSKALVLTEIGPKRDPATLKLFLSNMERLLHAKAHGVRVIG 205
+G GA+ NG+R++V L A V+ P R + ++L N+ + + + +R G
Sbjct: 131 KGLGAYVNGKRIKVKDNESLKHAGVVYGF-PSRSRRDISIYL-NIFKDVFYEVGSMRRPG 188
Query: 206 SSTLALCHLASGAADAYYQFGLHCWDLAAATVIIREAGGI 245
++ + LC +A G D +F + WD+ A VI++EAGG+
Sbjct: 189 AAAVDLCMVAEGIFDGMMEFEMKPWDITAGLVILKEAGGV 228
>3LV0-A nrPDB
Length = 267
Score = 123 bits (308), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 81/266 (30%), Positives = 137/266 (51%), Gaps = 9/266 (3%)
Query: 15 PWEECFQAAVQLALRAGQIIRKALTEEKRVSTKTSA-ADLVTETDHLVEDLIISELRERF 73
P VQ A++AG+ + + E + + AD V++ D E +I +EL +
Sbjct: 6 PQSAVMNVMVQAAMKAGRSLVRDYGEVQNLQVSLKGPADYVSQADRKAEKIIFNELSKAR 65
Query: 74 PSHRFIAEEAAASGAKCVLTHSP-TWIIDPIDGTCNFVHRFPTVAVSIGFAVRQELEFGV 132
P F+ EE+ + + S +I+DP+DGT NF+H P AVSI + ++ GV
Sbjct: 66 PKFGFLMEESE----EIIGEDSQHRFIVDPLDGTTNFLHGIPFFAVSIALESQGKIVAGV 121
Query: 133 IYHCTEERLYTGRRGRGAFCNGQRLRVSGETDLSKALVLTEIGPKRDPATLKLFLSNMER 192
IY+ + L+T RG GAF N +R RVS L ++ T + P +L +
Sbjct: 122 IYNPINDELFTAERGSGAFFNDRRCRVSARRRLEDCVIATGM-PHLGRPGHGTYLIELRN 180
Query: 193 LLHAKAHGVRVIGSSTLALCHLASGAADAYYQFGLHCWDLAAATVIIREAGGIVIDTSGG 252
++ A+ G+R G++ L L ++A+G D +++ L WD+AA +++REAGG V D GG
Sbjct: 181 VM-AEVSGIRRFGTAALDLAYVAAGRTDGFWEDNLQIWDMAAGILMVREAGGFVTDKEGG 239
Query: 253 PLDLMACRVVAASTREMAMLIAQALQ 278
D+ + + A + + + +AL+
Sbjct: 240 N-DIFRKKNIIAGNEHIRIKLERALK 264
>5J16-A nrPDB
Length = 283
Score = 117 bits (294), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 70/250 (28%), Positives = 116/250 (46%), Gaps = 7/250 (2%)
Query: 26 LALRAGQIIRKALTEEKRVSTKTSAADLVTETDHLVEDLIISELRERFPSHRFIAEEAAA 85
L AG I++ + + + TK++ DLVT D ED I + E +P+H+ + EE
Sbjct: 18 LIQEAGIRIKQLMEQNLTIETKSNPNDLVTNVDKATEDFIFDTILETYPNHQVLGEEG-- 75
Query: 86 SGAKCVLTHSPTWIIDPIDGTCNFVHRFPTVAVSIGFAVRQELEFGVIYHCTEERLYTGR 145
G + W++DPIDGT NFVH+ A+SIG + + G +Y + LY +
Sbjct: 76 HGHDIDTSKGTVWVVDPIDGTLNFVHQQENFAISIGIYIDGKPYAGFVYDVMADVLYHAK 135
Query: 146 RGRGAFCNGQRLRVSGETDLSKALVLTEIGPKRDPATLKLFLSNMERLLHAKAHGVRVIG 205
G GA+ Q L+ +++L ++++ I P K L + + + + R G
Sbjct: 136 VGEGAYRGSQPLKPLNDSNLRQSII--GINPN---WLTKPILGEIFKEIVNDSRSARAYG 190
Query: 206 SSTLALCHLASGAADAYYQFGLHCWDLAAATVIIREAGGIVIDTSGGPLDLMACRVVAAS 265
S+ L + +A+G +AY L WD A VI+ E G + G PL + +
Sbjct: 191 SAALEIVSVATGNLEAYMTPRLQPWDFAGGLVILYEVNGQASNLLGEPLTISGPNSILVG 250
Query: 266 TREMAMLIAQ 275
R + I+
Sbjct: 251 NRGLHQEISN 260
>1G0H-A nrPDB
Length = 252
Score = 92.8 bits (229), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 61/229 (26%), Positives = 112/229 (48%), Gaps = 29/229 (12%)
Query: 58 DHLVEDLIISELRERFPSHRFIAEEAAASGAKCVLTHSPTW--IIDPIDGTCNFVHRFPT 115
D + ED+ + L+ + ++EE V+ +S W +IDPIDG+ NF++ P
Sbjct: 44 DKISEDIALKYLKSL--NVNIVSEELG------VIDNSSEWTVVIDPIDGSFNFINGIPF 95
Query: 116 VAVSIGFAVRQELEFGVIYHCTEERLYTGRRGRGAFCNGQRLRVSGETDLSKALVLTEIG 175
A G E +G+ Y + Y +G+GA+ NG++++V D + ++
Sbjct: 96 FAFCFGVFKNNEPYYGLTYEFLTKSFYEAYKGKGAYLNGRKIKVK---DFNPNNIVISYY 152
Query: 176 PKRDPATLKLFLSNMERLLHAKAHGVRVIGSSTLALCHLASGAADAYYQF--GLHCWDLA 233
P + ++E+ L K VR+ G+ L +C++A G DA + + D+A
Sbjct: 153 PSKK--------IDLEK-LRNKVKRVRIFGAFGLEMCYVAKGTLDAVFDVRPKVRAVDIA 203
Query: 234 AATVIIREAGGIVIDTSGGPL--DLMAC---RVVAASTREMAMLIAQAL 277
++ +I +EAG ++ D +G L DL A ++ A+++EM +I L
Sbjct: 204 SSYIICKEAGALITDENGDELKFDLNATDRLNIIVANSKEMLDIILDLL 252
>2Q74-A nrPDB
Length = 299
Score = 92.0 bits (227), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 71/208 (34%), Positives = 97/208 (46%), Gaps = 18/208 (8%)
Query: 34 IRKALTEEKRVSTKTSAADLVTETDHLVEDLIISELRERFPSHRFIAEEAAASGAKCVLT 93
I +A + V K+S D VT D E L+ L + P + EE G +T
Sbjct: 36 ISRAGDGDGAVRAKSSPTDPVTVVDTDTERLLRDRLAQLRPGDPILGEEG---GGPADVT 92
Query: 94 HSP----TWIIDPIDGTCNFVHRFPTVAVSIGFAVRQELEFGVIYHCTEERLYTGRRGRG 149
+P TW++DPIDGT NFV+ P AVSIG V G + +Y+ G G
Sbjct: 93 ATPSDRVTWVLDPIDGTVNFVYGIPAYAVSIGAQVGGITVAGAVADVAARTVYSAATGLG 152
Query: 150 AFCNGQR----LRVSGETDLSKALVLTEIGPKRDPATLKLFLSNMERLLHAK--AHGVRV 203
A +R LR +G +LS AL+ T G +++ E L H VR
Sbjct: 153 AHLTDERGRHVLRCTGVDELSMALLGTGFG-----YSVRCREKQAELLAHVVPLVRDVRR 207
Query: 204 IGSSTLALCHLASGAADAYYQFGLHCWD 231
IGS+ L LC +A+G DAYY+ G+ WD
Sbjct: 208 IGSAALDLCMVAAGRLDAYYEHGVQVWD 235
>1XI6-A nrPDB
Length = 262
Score = 86.7 bits (213), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 65/238 (27%), Positives = 107/238 (44%), Gaps = 27/238 (11%)
Query: 48 TSAADLVTETDHLVEDLIISELRERFPSHRFIAEEAAASGAKCVLTHSPTWIIDPIDGTC 107
+ + D D L EDLI+S + E ++EE + T I+DP+DG+
Sbjct: 45 SPSGDETKLVDKLAEDLILSRITEL--GVNVVSEEVGVIDNES----EYTVIVDPLDGSY 98
Query: 108 NFVHRFPTVAVSIGFAVRQELEFGVIYHCTEERLYTGRRGRGAFCNGQRLRVSGETDLSK 167
NF+ P A+S+ + + + +IY ER + G G GAF NG+R++V D
Sbjct: 99 NFIAGIPFFALSLAVFKKDKPIYAIIYEPMTERFFEGIPGEGAFLNGKRIKVRKTPDEKP 158
Query: 168 ALVLTEIGPKRDPATLKLFLSNMERLLHAKAHGVRVIGSSTLALCHLASGAADAYYQFGL 227
++ G E + H K R +G+ L L +LA GA D
Sbjct: 159 SISFYSRG------------KGHEIVKHVKR--TRTLGAIALELAYLAMGALDGVVDVRK 204
Query: 228 HC--WDLAAATVIIREAGGIVIDTSGGPLDLMA-----CRVVAASTREMAMLIAQALQ 278
+ D+AA T+I +EAG ++ D++G +D+ V+A ++ E+ I L+
Sbjct: 205 YVRPTDIAAGTIIAKEAGALIKDSAGKDIDISFNATDRLDVIAVNSEELLKTILSLLE 262
>1VDW-A nrPDB
Length = 254
Score = 85.5 bits (210), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 62/238 (26%), Positives = 110/238 (46%), Gaps = 28/238 (11%)
Query: 48 TSAADLVTETDHLVEDLIISELRERFPSHRFIAEEAAASGAKCVLTHSPTWIIDPIDGTC 107
+ + D D + E++IIS+ ++ ++EE + T ++DP+DG+
Sbjct: 37 SPSGDETKVVDKVAENIIISKFKDL--GVNVVSEEIG----RIDQGSDYTVVVDPLDGSY 90
Query: 108 NFVHRFPTVAVSIGFAVRQELEFGVIYHCTEERLYTGRRGRGAFCNGQRLRVSGETDLSK 167
NF++ P AVS+ ++ + IY ERLY G G+G++ NG++++V
Sbjct: 91 NFINGIPFFAVSVAIFHEKDPIYAFIYEPIVERLYEGIPGKGSYLNGEKIKVR------- 143
Query: 168 ALVLTEIGPKRDPATLKLFLSNMERLLHAKAHGVRVIGSSTLALCHLASGAADAYYQF-- 225
E+ K ++ + + K R +G+ L L +LA GA DA
Sbjct: 144 -----ELAEK---PSISFYTKGKGTKIIDKVKRTRTLGAIALELAYLARGALDAVVDIRN 195
Query: 226 GLHCWDLAAATVIIREAGGIVIDTSGGPLDLM-----ACRVVAASTREMAMLIAQALQ 278
L D+AA VI REAG IV D G +++ ++AA+ E+ I ++++
Sbjct: 196 YLRPTDIAAGVVIAREAGAIVKDLDGKDVEITFSATEKVNIIAANNEELLETILRSIE 253
>3QMF-A nrPDB
Length = 273
Score = 77.8 bits (190), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 88/205 (42%), Gaps = 20/205 (9%)
Query: 32 QIIRKALTEEKRVSTKTSAADLVTETDHLVEDLIISELRERFPSHRFIAEEAAASGAKCV 91
Q+I + TE KR DLVT D ++ L FP H+ +AEE + +
Sbjct: 34 QLIMEMTTETKR-----HRFDLVTNVDKQIQQQFQQFLATYFPEHQLLAEEKSNAMITNE 88
Query: 92 LTHSPTWIIDPIDGTCNFVHRFPTVAVSIGFAVRQELEFGVIYHCTEERLYTGRRGRGAF 151
+ H WI+DPIDGT N V + + + + + +Y ++LY RG GAF
Sbjct: 89 INH--LWIMDPIDGTANLVKQQEDYCIILAYFYEGKPMLSYVYDYPHKKLYKAIRGEGAF 146
Query: 152 CNGQRLRVSGETDLSKALVLTEIGPKRDPATLKLFLSNMERL--LHAKAHGVRVIGSSTL 209
CNG ++ L A++ + + N++ + L + R++G+ L
Sbjct: 147 CNGIKMEEPPSLKLEDAII-----------SFNAQVMNLDTVQDLFDASFSYRLVGACGL 195
Query: 210 ALCHLASGAADAYYQFGLHCWDLAA 234
+A G A+ WD+AA
Sbjct: 196 DSMRVAKGQFGAHINTNPKPWDIAA 220
>5YHT-A nrPDB
Length = 267
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 73/241 (30%), Positives = 103/241 (42%), Gaps = 22/241 (9%)
Query: 23 AVQLALRAGQIIRKALTE-EKRVSTKTSAADLVTETDHLVEDLIISELRERFPSHRFIAE 81
A+ LA RA ++ R + R+ TK VT+ D VE + L P + E
Sbjct: 16 ALALADRADELTRVRFGALDLRIDTKPDLTP-VTDADRAVESDVRQTLGRDRPGDGVLGE 74
Query: 82 EAAASGAKCVLTHSPTWIIDPIDGTCNFVHRFPTVAVSIGFAVRQELEFGVIYHCTEERL 141
E G T WI+DPIDGT NFV P A I GV+ +R
Sbjct: 75 E---FGGSTTFTGR-QWIVDPIDGTKNFVRGVPVWASLIALLEDGVPSVGVVSAPALQRR 130
Query: 142 YTGRRGRGAFCN-----GQRLRVS--GETDLSKALVLTEIGPKRDPATLKLFLSNMERLL 194
+ RGRGAF + RL VS E + + G R P + F+ + +
Sbjct: 131 WWAARGRGAFASVDGARPHRLSVSSVAELHSASLSFSSLSGWAR-PGLRERFIGLTDTVW 189
Query: 195 HAKAHGVRVIGSSTLALCHLASGAADAYYQFGLHCWDLAAATVIIREAGGIV--IDTSGG 252
+A+G L+ C +A GA D + + WDLAA +++REAGG + +D G
Sbjct: 190 RVRAYG------DFLSYCLVAEGAVDIAAEPQVSVWDLAALDIVVREAGGRLTSLDGVAG 243
Query: 253 P 253
P
Sbjct: 244 P 244
>5EQA-A nrPDB
Length = 277
Score = 75.1 bits (183), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 68/264 (25%), Positives = 108/264 (40%), Gaps = 25/264 (9%)
Query: 30 AGQIIRKALTEEKRVSTKTSAADLVTETDHLVEDLIISELRERFPSHRFIAEEAAASGAK 89
AG +IRK + + VT D E+ ++S + + FPSH EE G +
Sbjct: 28 AGDVIRKYFRKNNFDIIHKNDLSPVTIADQSAEEAMVSVILDNFPSHAVYGEE---KGWR 84
Query: 90 CVLTHSP-TWIIDPIDGTCNFVHRFPTVAVSIGFAVRQELEFGVIYHCTEERLYTGRRGR 148
C + W++DPIDGT +F+ P I G+I + + G G+
Sbjct: 85 CKQDSADYVWVLDPIDGTKSFITGKPLFGTLIALLQNGTPILGIIDQPVLKERWIGITGK 144
Query: 149 GAFCNGQRLRVSGETDLSKALVLTEIGPKRDPATLKLFLSNMERLLHAKAHGVRV--IGS 206
NGQ + DLS+A + T + LF + E V++ G
Sbjct: 145 RTTLNGQEVSTRTCADLSQAYLYT--------TSPHLFSGDAEEAFIRVRDKVKIPLYGC 196
Query: 207 STLALCHLASGAADAYYQFGLHCWDLAAATVIIREAGGIVIDTSG-------GPLDL-MA 258
A L+SG D + GL +D A +I +GG++ D G PL + +
Sbjct: 197 DCYAYALLSSGFVDLVVESGLKPYDFLALIPVIEGSGGVITDWKGHQLRWEASPLSIATS 256
Query: 259 CRVVAASTREMAMLIAQALQTINY 282
VVAA +++ QAL ++ +
Sbjct: 257 FNVVAAGDKQIHQ---QALDSLQW 277
>1JP4-A nrPDB
Length = 308
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 74/271 (27%), Positives = 104/271 (38%), Gaps = 52/271 (19%)
Query: 22 AAVQLALRAGQIIRKALTE-EKRVSTKTSAADLVTETDHLVEDLIISELRERFPSHRFIA 80
+A +A +AG I+R + E + + KTSA DL T+ D +V+ I S L +FP I
Sbjct: 14 SAYSIAQKAGTIVRCVIAEGDLGIVQKTSATDLQTKADRMVQMSICSSLSRKFPKLTIIG 73
Query: 81 EEAAASG-----------------AKCVLTHSP-------TWIIDPIDGTCNFVH-RFPT 115
EE G C +S W+ DP+DGT +
Sbjct: 74 EEDLPPGEVDQELIEDGQSEEILKQPCPSQYSAIKEEDLVVWV-DPVDGTKEYTEGLLDN 132
Query: 116 VAVSIGFAVRQELEFGVI---YHCTEE-------RLYTGRRGRGAFCNGQRLRVSGETDL 165
V V IG A + G+I Y+ + R G G GAF G +L+ E
Sbjct: 133 VTVLIGIAYEGKAIAGIINQPYYNYQAGPDAVLGRTIWGVLGLGAF--GFQLK---EAPA 187
Query: 166 SKALVLTEIGPKRDPATLKLFLSNMERLLHAKAHGVRVIGSSTLALCHLASGAADAYYQF 225
K ++ T T + N + +L G ++I L G A AY
Sbjct: 188 GKHIITTTRSHSNKLVTDCIAAMNPDNVLRVGGAGNKII--------QLIEGKASAYVFA 239
Query: 226 GLHC--WDLAAATVIIREAGGIVIDTSGGPL 254
C WD A VI+ GG + D G PL
Sbjct: 240 SPGCKKWDTCAPEVILHAVGGKLTDIHGNPL 270
>1LBZ-A nrPDB
Length = 252
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 85/205 (41%), Gaps = 35/205 (17%)
Query: 58 DHLVEDLIISELRERFPSHRFIAEEAAASGAKCVLTHSPTWIIDPIDGTCNFVHRFPTVA 117
D + ED + LR+ + + EE+ G V +DP+DGT N P +
Sbjct: 46 DRVAEDAALEILRKERVT--VVTEESGVLGEGDVFVA-----LDPLDGTFNATRGIPVYS 98
Query: 118 VSIGFAVRQELE---FGVIYH-CTEERLYTGRRGRGAFCNGQRLRVSGETDLSKALVLTE 173
VS+ F+ +L+ FG +Y+ T + Y GA+ NG+R+ VS +L ++
Sbjct: 99 VSLCFSYSDKLKDAFFGYVYNLATGDEYYAD--SSGAYRNGERIEVSDAEELYCNAIIYY 156
Query: 174 IGPKRDPATLKLFLSNMERLLHAKAHGVRVIGSSTLALCHLASGAADAYYQFG----LHC 229
P R K M R+ GS+ LC A G+ D + L
Sbjct: 157 --PDR-----KFPFKRM-----------RIFGSAATELCFFADGSFDCFLDIRPGKMLRI 198
Query: 230 WDLAAATVIIREAGGIVIDTSGGPL 254
+D AA I +AGG V + G L
Sbjct: 199 YDAAAGVFIAEKAGGKVTELDGESL 223
>4O7I-A nrPDB
Length = 325
Score = 54.7 bits (130), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 74/295 (25%), Positives = 114/295 (38%), Gaps = 61/295 (20%)
Query: 20 FQAAVQLALRAGQIIRK--------ALTEEKRVSTKTSAADLVTETDHLVEDLIISELRE 71
F + LAL Q+ K LT++ ++ S VT D+ V+ + ++ E
Sbjct: 3 FDKELALALEIVQVSCKITTSVAEHTLTDQTQIKNDKSP---VTVGDYSVQAYVNKKIHE 59
Query: 72 RFPSHRFIAEEAA--------ASGAKCVLTHSPT---------------------WIIDP 102
FP + +AEE A K V +S W++DP
Sbjct: 60 TFPEDQIVAEEDTKTIPEDIFAKVCKHVQIYSDMKDDEIRKSIDLGNSTGGKGRHWVLDP 119
Query: 103 IDGTCNFVHRFPTVAVSIGFAVRQELEFGVIYHCTEE--RLYTGRRGRGA-------FCN 153
IDGT F+ R AV + F + +++ GV+ E + ++G GA N
Sbjct: 120 IDGTLGFLRR-EQYAVCLAFMIDGDIKVGVLGCPNFEGGLIVAAQKGCGAKMFSVNDIKN 178
Query: 154 GQRLRVSGETDLSKALVLTEIGPKRDPATLKLFLSNMERLLHAKAHGVRVIGSSTLALCH 213
G+ + VS S + + ++ ERL K VR+ S
Sbjct: 179 GKDIHVSTTPKTSDMCFCESVEVSHTDQSRSKTIT--ERLQVTKP-PVRM--DSQCKYMA 233
Query: 214 LASGAADAYYQ------FGLHCWDLAAATVIIREAGGIVIDTSGGPLDLMACRVV 262
+ASG AD Y + + WD AA +I++EAGG V D G LD R +
Sbjct: 234 IASGRADVYLRLPRNLSYQEKIWDHAAGYLIVKEAGGKVTDIYGNDLDFSLGRTL 288
>3B8B-A nrPDB
Length = 292
Score = 54.3 bits (129), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 64/227 (28%), Positives = 95/227 (41%), Gaps = 21/227 (9%)
Query: 22 AAVQLALRAGQIIRKALTEEKRVSTKTSAAD--LVTETDHLVEDLIISELRER-FPSHRF 78
AA+ AL+AG+ I + K AD +T D + I++ L E FP
Sbjct: 26 AAIDAALKAGEKILSIYEDPKSDFEIERKADNSPLTIADRKAHEAIVAILNETPFP---V 82
Query: 79 IAEEAAASGAKCVLTHSPTWIIDPIDGTCNFVHRFPTVAVSIGFAVRQELEFGVIYHCTE 138
++EE WI+DP+DGT F+ R V+I GVIY +
Sbjct: 83 LSEEGKHMDYAVRRGWDTLWIVDPLDGTKEFIKRNGEFTVNIALVQNAVPVMGVIYVPVK 142
Query: 139 ERLYTGRRGRGAF-CNG-QRLRVSGETDLSKALVLTEIGPKRDPATLKLFLSNMERL--- 193
+ LY G GA+ C+G L G T L + + +E P D + +++ L
Sbjct: 143 KELYFAVEGTGAYKCSGIVGLEDEGVT-LQQMIEKSERMPLADARDHFIAVASRSHLTPE 201
Query: 194 -------LHAKAHGVRVIGS-STLALCHLASGAADAYYQFGLHC-WD 231
L K V +I S S++ +C +A G AD Y +F WD
Sbjct: 202 TETYIADLKKKHGNVELISSGSSIKICLVAEGKADVYPRFAPTMEWD 248
>2WEF-A nrPDB
Length = 311
Score = 53.9 bits (128), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 74/271 (27%), Positives = 102/271 (37%), Gaps = 52/271 (19%)
Query: 22 AAVQLALRAGQIIRKALTE-EKRVSTKTSAADLVTETDHLVEDLIISELRERFPSHRFIA 80
+A +A +AG I+R+ + E + + KT A DL T+ D L + I S L +FP I
Sbjct: 10 SAYSIAQKAGMIVRRVIAEGDLGIVEKTCATDLQTKADRLAQMSICSSLARKFPKLTIIG 69
Query: 81 EEAAAS-----------------GAKCVLTHSP-------TWIIDPIDGTCNFVH-RFPT 115
EE S C +S W+ DP+DGT +
Sbjct: 70 EEDLPSEEVDQELIEDSQWEEILKQPCPSQYSAIKEEDLVVWV-DPLDGTKEYTEGLLDN 128
Query: 116 VAVSIGFAVRQELEFGVI---YHCTEE-------RLYTGRRGRGAFCNGQRLRVSGETDL 165
V V IG A + GVI Y+ E R G G GAF G +L+ E
Sbjct: 129 VTVLIGIAYEGKAIAGVINQPYYNYEAGPDAVLGRTIWGVLGLGAF--GFQLK---EVPA 183
Query: 166 SKALVLTEIGPKRDPATLKLFLSNMERLLHAKAHGVRVIGSSTLALCHLASGAADAYYQF 225
K ++ T T + N + +L G ++I L G A AY
Sbjct: 184 GKHIITTTRSHSNKLVTDCVAAMNPDAVLRVGGAGNKII--------QLIEGKASAYVFA 235
Query: 226 GLHC--WDLAAATVIIREAGGIVIDTSGGPL 254
C WD A VI+ GG + D G L
Sbjct: 236 SPGCKKWDTCAPEVILHAVGGKLTDIHGNVL 266
>4N81-A nrPDB
Length = 259
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 60/259 (23%), Positives = 96/259 (37%), Gaps = 20/259 (7%)
Query: 16 WEECFQAAVQLALRAGQIIRKALTEEKRVSTKTSAADLVTETDHLVEDLIISELRERFPS 75
+E+ + A +LA A IIR + K + VT+ D E + + L + P
Sbjct: 6 YEDDIRLAHRLADVAADIIRPFFRAPLTIDLKADHSP-VTKADRGAEQAMRAILEQERPE 64
Query: 76 HRFIAEEAAASGAKCVLTHSPTWIIDPIDGTCNFVHRFPTVAVSIGFAVRQELEFGVIYH 135
EE S W++DPIDGT F+ + I G+I
Sbjct: 65 DGIFGEEMGVSRPDA----RRLWVLDPIDGTRAFIGGRASFGTLIALVEDGRPVLGIINQ 120
Query: 136 CTEERLYTGRRGRGAFCNGQRLRVSGETDLSKALVLTEIGPKRDPATLKLFLSNMERLLH 195
+ + G + NG+ + L AL+ AT +L E +H
Sbjct: 121 PIHQERWVGVKDLPTSFNGEVIHTRSCPALDHALL----------ATTSPWLFEKEGEVH 170
Query: 196 AKAHGVR----VIGSSTLALCHLASGAADAYYQFGLHCWDLAAATVIIREAGGIVIDTSG 251
++ ++G L+ G D + GL +D AA I+ AGGI+ D
Sbjct: 171 FDKIRLKCRDTLLGGDCYNYGLLSLGHCDLVVEQGLKFYDFAALVPIVEGAGGIMRDWQN 230
Query: 252 GPLDLMAC-RVVAASTREM 269
PL+ + V+AA +
Sbjct: 231 RPLNKNSVGEVIAAGDHHL 249
>4QXD-A nrPDB
Length = 293
Score = 47.8 bits (112), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 53/241 (21%), Positives = 94/241 (39%), Gaps = 44/241 (18%)
Query: 38 LTEEKRVSTKTSAADLVTETDHLVEDLIISELRERFPSHRFIAEEAAASGAKCVLTHSPT 97
EE + K+ ++ VT+ D + +I S ++ ++P+ I EE +G + T
Sbjct: 26 FKEEVEIKYKSDGSE-VTQVDTQSQQIIFSIIKNKYPTINIIGEEDVENGIPDNQLPTIT 84
Query: 98 WI------------------IDPIDGTCNFVHR-FPTVAVSIGFAVRQELEFGVIYHCTE 138
+ +DP+DGT + H+ + +V V +G + + G++
Sbjct: 85 QLSFGSLENKIININDIIIYVDPLDGTDCYTHKQYDSVCVLVGVTYKGKPMIGIV----- 139
Query: 139 ERLYTGRRGRGAFCNGQRLRVSGETDLSKALVLTEIGPKRDPATLKLFLSN-MERLLHA- 196
F N + + + E +S + P D N ++ L+ +
Sbjct: 140 ---------SKPFYNNE-ITFAIENYISS----ISLQPLNDKIIFVCSKKNDIQHLIKSF 185
Query: 197 -KAHGVRVIGSSTLALCHLASGAADAYYQFGLHC--WDLAAATVIIREAGGIVIDTSGGP 253
+ V+ G S + + AD YY + WD AA VI+ GGIV D G P
Sbjct: 186 PDPYEVKYKGGSGAKMMAIIHQEADIYYHPLIQSCTWDTLAAQVILEAQGGIVCDIYGNP 245
Query: 254 L 254
L
Sbjct: 246 L 246
>5ESY-A nrPDB
Length = 346
Score = 44.7 bits (104), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 53/225 (23%), Positives = 86/225 (38%), Gaps = 53/225 (23%)
Query: 98 WIIDPIDGTCNFVHRFPTVAVSIGFAVRQELEFGVI----------------YHCTEER- 140
W++DPIDGT F+ R AV++G ++ GV+ ++E
Sbjct: 131 WVLDPIDGTKGFL-RGDQYAVALGLLEEGKVVLGVLACPNLPLASIAGNNKNKSSSDEIG 189
Query: 141 -LYTGRRGRGAFCNGQRLRVSGETDLSKALVLTEIGPKRDPATLKLF------------L 187
L+ G G + Q L D + V ++ +P F
Sbjct: 190 CLFFATIGSGTYM--QLL------DSKSSPVKVQVSSVENPEEASFFESFEGAHSLHDLS 241
Query: 188 SNMERLLHAKAHGVRVIGSSTLALCHLASGAADAYYQFG-----LHCWDLAAATVIIREA 242
S++ L KA VR+ S L+ G Y +F WD A +++ EA
Sbjct: 242 SSIANKLGVKAPPVRI--DSQAKYGALSRGDGAIYLRFPHKGYREKIWDHVAGAIVVTEA 299
Query: 243 GGIVIDTSGGPLDLMACR-------VVAASTREMAMLIAQALQTI 280
GGIV D +G PLD + ++ A+ + M +L+ +I
Sbjct: 300 GGIVTDAAGKPLDFSKGKYLDLDTGIIVANEKLMPLLLKAVRDSI 344
>1KA0-A nrPDB
Length = 357
Score = 42.4 bits (98), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 55/199 (27%), Positives = 73/199 (36%), Gaps = 43/199 (21%)
Query: 98 WIIDPIDGTCNFVHRFPTVAVSIGFAVRQELEFGVIY----------------HCTEERL 141
W +DPIDGT F+ R AV + V ++ G I H + +
Sbjct: 139 WCLDPIDGTKGFL-RGEQFAVCLALIVDGVVQLGCIGCPNLVLSSYGAQDLKGHESFGYI 197
Query: 142 YTGRRGRGAFCNGQ-------RLRVSGETDLSKALVL--TEIG-PKRDPATLKLFLSNME 191
+ RG GAF + ++ V D + L E G D T N+
Sbjct: 198 FRAVRGLGAFYSPSSDAESWTKIHVRHLKDTKDMITLEGVEKGHSSHDEQTAIKNKLNIS 257
Query: 192 RLLHAKAHGVRVIGSSTLALCHLASGAADAYYQFGLH------CWDLAAATVIIREAGGI 245
+ LH S C LA G AD Y + + WD AA VI+ EAGGI
Sbjct: 258 KSLHL---------DSQAKYCLLALGLADVYLRLPIKLSYQEKIWDHAAGNVIVHEAGGI 308
Query: 246 VIDT-SGGPLDLMACRVVA 263
D PLD R +A
Sbjct: 309 HTDAMEDVPLDFGNGRTLA 327
Score = 29.6 bits (65), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 20/69 (28%), Positives = 34/69 (49%), Gaps = 11/69 (15%)
Query: 28 LRAGQIIRKALTEEKRV---------STKTSAADL--VTETDHLVEDLIISELRERFPSH 76
L A Q +RKA KR+ ST + D VT D+ + +II+ ++ FP
Sbjct: 8 LVATQAVRKASLLTKRIQSEVISHKDSTTITKNDNSPVTTGDYAAQTIIINAIKSNFPDD 67
Query: 77 RFIAEEAAA 85
+ + EE+++
Sbjct: 68 KVVGEESSS 76
>5DJK-A nrPDB
Length = 288
Score = 32.0 bits (71), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 57/228 (25%), Positives = 77/228 (33%), Gaps = 51/228 (22%)
Query: 58 DHLVEDLIISELRERFPSHRFIAEEAAASGAKCVLTHSPTWIIDPIDGTCNFVHRFPTVA 117
D L++ L+ P ++EEA A+ L WIIDP+DGT F +
Sbjct: 71 DRQANSLLLRRLQAERPGDAVLSEEAHDDLAR--LKSDRVWIIDPLDGTREF-----STP 123
Query: 118 VSIGFAVRQELEFGVIYHCTEERLYTGRRGRGAFCNGQR--------LRVSGETDLSKAL 169
+AV L RR NGQ L G
Sbjct: 124 GRDDWAVHIALW---------------RRS----SNGQPEITDAAVALPARGNVVYRTDT 164
Query: 170 VLTEIGPKRDPATLKLFLSN------MERLLHAKAHGVRVIGSSTLALCHLASGAADAYY 223
V + P P TL++ +S + R+ A IGS+ + G DAY
Sbjct: 165 VTSGAAPAGVPGTLRIAVSATRPPAVLHRIRQTLAIQPVSIGSAGAKAMAVIDGYVDAYL 224
Query: 224 QFGLHC-WDLAAATVIIREAGGIVIDTSGGPL----------DLMACR 260
G WD AA ++ AG G PL DL+ CR
Sbjct: 225 HAGGQWEWDSAAPAGVMLAAGMHASRLDGSPLRYNQLDPYLPDLLMCR 272
>6AAE-A nrPDB
Length = 317
Score = 31.2 bits (69), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 27/108 (25%), Positives = 46/108 (42%), Gaps = 5/108 (4%)
Query: 61 VEDLIISELRERFPSHRFIAEEAAASGAKCVLTHSPTWII---DPIDGTCNFVHRFPTVA 117
VE++ IS + ++ E+A A V H W+I D DGTC + + A
Sbjct: 46 VENIAISLDGRDLDARLYVPEDADERPALMVYYHGGGWVIGTLDTHDGTCRALAQKSGCA 105
Query: 118 V-SIGFAVRQELEFGVIYH-CTEERLYTGRRGRGAFCNGQRLRVSGET 163
V SI + + E + C + ++ + +G RL V G++
Sbjct: 106 VLSIAYRLAPEYRYPAPAEDCYDALVWAKQNAATLGVDGDRLAVGGDS 153
>3KRZ-A nrPDB
Length = 337
Score = 27.7 bits (60), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 27/45 (60%), Gaps = 1/45 (2%)
Query: 24 VQLALRAGQIIRKALTEEKRVSTKTSAADLVTETDHLVEDLIISE 68
V + L G ++ A T +KR + KTSA L+T T L E+++ +E
Sbjct: 256 VDINLYPGYQVKYAETIKKRCNIKTSAVGLIT-TQELAEEILSNE 299
>4MH4-A nrPDB
Length = 147
Score = 27.3 bits (59), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 12/30 (40%), Positives = 17/30 (56%)
Query: 4 SGEDQAALAAGPWEECFQAAVQLALRAGQI 33
+G + L A W CF A+QLA RA ++
Sbjct: 51 TGTNPEQLFAAGWSACFIGAMQLAARAAKV 80
Searching..................................................done
Results from round 2
Score E
Sequences producing significant alignments: (bits) Value
Sequences used in model and found again:
2CZH-A nrPDB 393 e-110
1IMD-A nrPDB 365 e-101
4AS5-A nrPDB 362 e-101
2BJI-A nrPDB 362 e-100
6IB8-A nrPDB 264 3e-71
5ZHH-A nrPDB 259 9e-70
5J16-A nrPDB 257 3e-69
3LV0-A nrPDB 248 3e-66
2PCR-A nrPDB 243 9e-65
2P3V-A nrPDB 236 9e-63
4N81-A nrPDB 233 7e-62
5EQA-A nrPDB 232 2e-61
1VDW-A nrPDB 204 2e-53
1XI6-A nrPDB 199 1e-51
4O7I-A nrPDB 195 2e-50
1G0H-A nrPDB 189 8e-49
1JP4-A nrPDB 187 4e-48
5YHT-A nrPDB 187 5e-48
3QMF-A nrPDB 186 9e-48
2WEF-A nrPDB 182 2e-46
4QXD-A nrPDB 172 1e-43
2Q74-A nrPDB 168 2e-42
3B8B-A nrPDB 167 6e-42
1KA0-A nrPDB 162 1e-40
1LBZ-A nrPDB 157 5e-39
5ESY-A nrPDB 141 3e-34
Sequences not found previously or not previously below threshold:
5DJK-A nrPDB 81 5e-16
1INP-A nrPDB 64 6e-11
2F3D-A nrPDB 39 0.002
2FHY-A nrPDB 39 0.002
1BK4-A nrPDB 38 0.005
5Q0C-A nrPDB 36 0.022
2QVR-A nrPDB 34 0.054
5FGU-A nrPDB 34 0.11
1SPI-A nrPDB 33 0.19
1DCU-A nrPDB 32 0.21
5IZ1-A nrPDB 32 0.28
6N9G-C nrPDB 32 0.33
4JG5-A nrPDB 30 1.7
3CMG-A nrPDB 29 2.2
6HHQ-h nrPDB 29 2.4
4ZSG-A nrPDB 29 3.5
4IC8-A nrPDB 29 3.5
5EUA-A nrPDB 29 3.6
4MKS-A nrPDB 28 4.1
5OQL-J nrPDB 28 4.3
3FN9-A nrPDB 28 4.3
4LJ8-A nrPDB 28 5.1
3BRN-A nrPDB 28 5.1
1QVR-A nrPDB 28 6.2
>2CZH-A nrPDB
Length = 299
Score = 393 bits (1010), Expect = e-110, Method: Composition-based stats.
Identities = 288/288 (100%), Positives = 288/288 (100%)
Query: 1 MKPSGEDQAALAAGPWEECFQAAVQLALRAGQIIRKALTEEKRVSTKTSAADLVTETDHL 60
MKPSGEDQAALAAGPWEECFQAAVQLALRAGQIIRKALTEEKRVSTKTSAADLVTETDHL
Sbjct: 12 MKPSGEDQAALAAGPWEECFQAAVQLALRAGQIIRKALTEEKRVSTKTSAADLVTETDHL 71
Query: 61 VEDLIISELRERFPSHRFIAEEAAASGAKCVLTHSPTWIIDPIDGTCNFVHRFPTVAVSI 120
VEDLIISELRERFPSHRFIAEEAAASGAKCVLTHSPTWIIDPIDGTCNFVHRFPTVAVSI
Sbjct: 72 VEDLIISELRERFPSHRFIAEEAAASGAKCVLTHSPTWIIDPIDGTCNFVHRFPTVAVSI 131
Query: 121 GFAVRQELEFGVIYHCTEERLYTGRRGRGAFCNGQRLRVSGETDLSKALVLTEIGPKRDP 180
GFAVRQELEFGVIYHCTEERLYTGRRGRGAFCNGQRLRVSGETDLSKALVLTEIGPKRDP
Sbjct: 132 GFAVRQELEFGVIYHCTEERLYTGRRGRGAFCNGQRLRVSGETDLSKALVLTEIGPKRDP 191
Query: 181 ATLKLFLSNMERLLHAKAHGVRVIGSSTLALCHLASGAADAYYQFGLHCWDLAAATVIIR 240
ATLKLFLSNMERLLHAKAHGVRVIGSSTLALCHLASGAADAYYQFGLHCWDLAAATVIIR
Sbjct: 192 ATLKLFLSNMERLLHAKAHGVRVIGSSTLALCHLASGAADAYYQFGLHCWDLAAATVIIR 251
Query: 241 EAGGIVIDTSGGPLDLMACRVVAASTREMAMLIAQALQTINYGRDDEK 288
EAGGIVIDTSGGPLDLMACRVVAASTREMAMLIAQALQTINYGRDDEK
Sbjct: 252 EAGGIVIDTSGGPLDLMACRVVAASTREMAMLIAQALQTINYGRDDEK 299
>1IMD-A nrPDB
Length = 277
Score = 365 bits (936), Expect = e-101, Method: Composition-based stats.
Identities = 147/275 (53%), Positives = 209/275 (76%)
Query: 13 AGPWEECFQAAVQLALRAGQIIRKALTEEKRVSTKTSAADLVTETDHLVEDLIISELRER 72
A PW+EC AV LA +AG+++ +A+ E V K+S DLVT TD VE ++IS ++E+
Sbjct: 2 ADPWQECMDYAVTLARQAGEVVCEAIKNEMNVMLKSSPVDLVTATDQKVEKMLISSIKEK 61
Query: 73 FPSHRFIAEEAAASGAKCVLTHSPTWIIDPIDGTCNFVHRFPTVAVSIGFAVRQELEFGV 132
+PSH FI EE+ A+G K +LT +PTWIIDPIDGT NFVHRFP VAVSIGFAV +++EFGV
Sbjct: 62 YPSHSFIGEESVAAGEKSILTDNPTWIIDPIDGTTNFVHRFPFVAVSIGFAVNKKIEFGV 121
Query: 133 IYHCTEERLYTGRRGRGAFCNGQRLRVSGETDLSKALVLTEIGPKRDPATLKLFLSNMER 192
+Y C E ++YT R+G+GAFCNGQ+L+VS + D++K+L++TE+G R P T+++ LSNME+
Sbjct: 122 VYSCVEGKMYTARKGKGAFCNGQKLQVSQQEDITKSLLVTELGSSRTPETVRMVLSNMEK 181
Query: 193 LLHAKAHGVRVIGSSTLALCHLASGAADAYYQFGLHCWDLAAATVIIREAGGIVIDTSGG 252
L HG+R +G++ + +C +A+G ADAYY+ G+HCWD+A A +I+ EAGG+++D +GG
Sbjct: 182 LFCIPVHGIRSVGTAAVNMCLVATGGADAYYEMGIHCWDVAGAGIIVTEAGGVLMDVTGG 241
Query: 253 PLDLMACRVVAASTREMAMLIAQALQTINYGRDDE 287
P DLM+ RV+AA+ R +A IA+ +Q I RDDE
Sbjct: 242 PFDLMSRRVIAANNRILAERIAKEIQVIPLQRDDE 276
>4AS5-A nrPDB
Length = 277
Score = 362 bits (930), Expect = e-101, Method: Composition-based stats.
Identities = 146/275 (53%), Positives = 209/275 (76%)
Query: 13 AGPWEECFQAAVQLALRAGQIIRKALTEEKRVSTKTSAADLVTETDHLVEDLIISELRER 72
A PW+EC AV LA +AG++IR+AL E V K+S ADLVT TD VE +++S ++E+
Sbjct: 2 ADPWQECMDYAVILARQAGEMIREALKNEMDVMIKSSPADLVTVTDQKVEKMLMSSIKEK 61
Query: 73 FPSHRFIAEEAAASGAKCVLTHSPTWIIDPIDGTCNFVHRFPTVAVSIGFAVRQELEFGV 132
+P H FI EE+ A+G K V T PTW+IDPIDGT NFVHRFP VAVSIGF V +E+EFG+
Sbjct: 62 YPCHSFIGEESVAAGEKTVFTEQPTWVIDPIDGTTNFVHRFPFVAVSIGFLVNKEMEFGI 121
Query: 133 IYHCTEERLYTGRRGRGAFCNGQRLRVSGETDLSKALVLTEIGPKRDPATLKLFLSNMER 192
+Y C E+++YTGR+G+GAFCNGQ+L+VS + D++K+L++TE+G R P TL++ LSNME+
Sbjct: 122 VYSCVEDKMYTGRKGKGAFCNGQKLQVSQQEDITKSLLVTELGSSRKPETLRIVLSNMEK 181
Query: 193 LLHAKAHGVRVIGSSTLALCHLASGAADAYYQFGLHCWDLAAATVIIREAGGIVIDTSGG 252
L HG+R +G++ + +C +A+G ADAYY+ G+HCWD+A A +I+ EAGG+++D +GG
Sbjct: 182 LCSIPIHGIRSVGTAAVNMCLVATGGADAYYEMGIHCWDMAGAGIIVTEAGGVLMDVTGG 241
Query: 253 PLDLMACRVVAASTREMAMLIAQALQTINYGRDDE 287
P DLM+ R++AA++ +A IA+ ++ I RDDE
Sbjct: 242 PFDLMSRRIIAANSITLAKRIAKEIEIIPLQRDDE 276
>2BJI-A nrPDB
Length = 277
Score = 362 bits (929), Expect = e-100, Method: Composition-based stats.
Identities = 148/275 (53%), Positives = 213/275 (77%)
Query: 13 AGPWEECFQAAVQLALRAGQIIRKALTEEKRVSTKTSAADLVTETDHLVEDLIISELRER 72
A PW+EC AV LA +AG+++R+AL E + K+S ADLVT TD VE ++I+ ++E+
Sbjct: 2 ADPWQECMDYAVTLAGQAGEVVREALKNEMNIMVKSSPADLVTATDQKVEKMLITSIKEK 61
Query: 73 FPSHRFIAEEAAASGAKCVLTHSPTWIIDPIDGTCNFVHRFPTVAVSIGFAVRQELEFGV 132
+PSH FI EE+ A+G K +LT +PTWIIDPIDGT NFVH FP VAVSIGF V +++EFG+
Sbjct: 62 YPSHSFIGEESVAAGEKSILTDNPTWIIDPIDGTTNFVHGFPFVAVSIGFVVNKKMEFGI 121
Query: 133 IYHCTEERLYTGRRGRGAFCNGQRLRVSGETDLSKALVLTEIGPKRDPATLKLFLSNMER 192
+Y C E+++YTGR+G+GAFCNGQ+L+VS + D++K+L++TE+G R P T+++ LSN+ER
Sbjct: 122 VYSCLEDKMYTGRKGKGAFCNGQKLQVSHQEDITKSLLVTELGSSRTPETVRIILSNIER 181
Query: 193 LLHAKAHGVRVIGSSTLALCHLASGAADAYYQFGLHCWDLAAATVIIREAGGIVIDTSGG 252
LL HG+R +G++ L +C +A+GAADAYY+ G+HCWD+A A +I+ EAGG+++D +GG
Sbjct: 182 LLCLPIHGIRGVGTAALNMCLVAAGAADAYYEMGIHCWDVAGAGIIVTEAGGVLLDVTGG 241
Query: 253 PLDLMACRVVAASTREMAMLIAQALQTINYGRDDE 287
P DLM+ RV+A+S + +A IA+ +Q I RDDE
Sbjct: 242 PFDLMSRRVIASSNKTLAERIAKEIQIIPLQRDDE 276
>6IB8-A nrPDB
Length = 271
Score = 264 bits (674), Expect = 3e-71, Method: Composition-based stats.
Identities = 89/273 (32%), Positives = 137/273 (50%), Gaps = 9/273 (3%)
Query: 9 AALAAGPWEECFQAAVQLALRAGQIIRKALTEEKRVS-TKTSAADLVTETDHLVEDLIIS 67
A+A P AV+ A +AG +I K V ++ + D VT D E +II
Sbjct: 1 GAMAMHP---MLNIAVRAARKAGNLIAKNYETPDAVEASQKGSNDFVTNVDKAAEAVIID 57
Query: 68 ELRERFPSHRFIAEEAAASGAKCVLTHSPTWIIDPIDGTCNFVHRFPTVAVSIGFAVRQE 127
+R+ +P H I EE+ G W+IDP+DGT NF+ R P AVSI ++
Sbjct: 58 TIRKSYPQHTIITEES---GELEGTDQDVQWVIDPLDGTTNFIKRLPHFAVSIAVRIKGR 114
Query: 128 LEFGVIYHCTEERLYTGRRGRGAFCNGQRLRVSGETDLSKALVLTEIGPKRDPATLKLFL 187
E V+Y L+T RG+GA NG RLR S DL ++ T P + ++
Sbjct: 115 TEVAVVYDPMRNELFTATRGQGAQLNGYRLRGSTARDLDGTILATGF-PFKAKQYATTYI 173
Query: 188 SNMERLLHAKAHGVRVIGSSTLALCHLASGAADAYYQFGLHCWDLAAATVIIREAGGIVI 247
+ + +L + A R GS+ L L ++A+G D +++ GL WD AA +++REAGGIV
Sbjct: 174 NIVGKLFNECAD-FRRTGSAALDLAYVAAGRVDGFFEIGLRPWDFAAGELLVREAGGIVS 232
Query: 248 DTSGGPLDLMACRVVAASTREMAMLIAQALQTI 280
D +GG ++ +VA + R + ++A +
Sbjct: 233 DFTGGHNYMLTGNIVAGNPRVVKAMLANMRDEL 265
>5ZHH-A nrPDB
Length = 270
Score = 259 bits (662), Expect = 9e-70, Method: Composition-based stats.
Identities = 77/241 (31%), Positives = 122/241 (50%), Gaps = 6/241 (2%)
Query: 41 EKRVSTKTSAADLVTETDHLVEDLIISELRERFPSHRFIAEEAAASGAKCVLTHSPTWII 100
E ++ K DLVT D E +++ +R FP H +AEE+ G + W I
Sbjct: 30 EDAITEKGRPGDLVTAADKASEAVVLEIIRRHFPQHSILAEESGKLGN---QDNEYLWAI 86
Query: 101 DPIDGTCNFVHRFPTVAVSIGFAVRQELEFGVIYHCTEERLYTGRRGRGAFCNGQRLRVS 160
DP+DGT N+ H++P VSIG + + GVIY + L+ G G GA N + ++VS
Sbjct: 87 DPLDGTTNYAHQYPAFCVSIGLLINGVPQVGVIYDPFHDELFRGAAGLGATRNRRPIKVS 146
Query: 161 GETDLSKALVLTEIGPKRDPATLKLFLSNMERLLHAKAHGVRVIGSSTLALCHLASGAAD 220
++LSK+L++T R + + L H GVR GS+ L L H+A G D
Sbjct: 147 DTSELSKSLLVTGFAYDRRETPDNNY-AEFCHLTHL-TQGVRRSGSAALDLAHVACGRVD 204
Query: 221 AYYQFGLHCWDLAAATVIIREAGGIVIDTSGGPLDLMACRVVAASTREMAMLIAQALQTI 280
Y++ G+ WD+ A +++ EAGG V PL + R++A + + +++AL +
Sbjct: 205 GYWERGISPWDVVAGVILLEEAGGKVTAYDSTPLKIATGRILATNG-SIHDNLSRALMQV 263
Query: 281 N 281
Sbjct: 264 P 264
>5J16-A nrPDB
Length = 283
Score = 257 bits (657), Expect = 3e-69, Method: Composition-based stats.
Identities = 69/253 (27%), Positives = 115/253 (45%), Gaps = 7/253 (2%)
Query: 23 AVQLALRAGQIIRKALTEEKRVSTKTSAADLVTETDHLVEDLIISELRERFPSHRFIAEE 82
A L AG I++ + + + TK++ DLVT D ED I + E +P+H+ + EE
Sbjct: 15 AQGLIQEAGIRIKQLMEQNLTIETKSNPNDLVTNVDKATEDFIFDTILETYPNHQVLGEE 74
Query: 83 AAASGAKCVLTHSPTWIIDPIDGTCNFVHRFPTVAVSIGFAVRQELEFGVIYHCTEERLY 142
G + W++DPIDGT NFVH+ A+SIG + + G +Y + LY
Sbjct: 75 G--HGHDIDTSKGTVWVVDPIDGTLNFVHQQENFAISIGIYIDGKPYAGFVYDVMADVLY 132
Query: 143 TGRRGRGAFCNGQRLRVSGETDLSKALVLTEIGPKRDPATLKLFLSNMERLLHAKAHGVR 202
+ G GA+ Q L+ +++L ++++ K L + + + + R
Sbjct: 133 HAKVGEGAYRGSQPLKPLNDSNLRQSIIGI-----NPNWLTKPILGEIFKEIVNDSRSAR 187
Query: 203 VIGSSTLALCHLASGAADAYYQFGLHCWDLAAATVIIREAGGIVIDTSGGPLDLMACRVV 262
GS+ L + +A+G +AY L WD A VI+ E G + G PL + +
Sbjct: 188 AYGSAALEIVSVATGNLEAYMTPRLQPWDFAGGLVILYEVNGQASNLLGEPLTISGPNSI 247
Query: 263 AASTREMAMLIAQ 275
R + I+
Sbjct: 248 LVGNRGLHQEISN 260
>3LV0-A nrPDB
Length = 267
Score = 248 bits (632), Expect = 3e-66, Method: Composition-based stats.
Identities = 80/265 (30%), Positives = 135/265 (50%), Gaps = 7/265 (2%)
Query: 15 PWEECFQAAVQLALRAGQIIRKALTEEKRVSTK-TSAADLVTETDHLVEDLIISELRERF 73
P VQ A++AG+ + + E + + AD V++ D E +I +EL +
Sbjct: 6 PQSAVMNVMVQAAMKAGRSLVRDYGEVQNLQVSLKGPADYVSQADRKAEKIIFNELSKAR 65
Query: 74 PSHRFIAEEAAASGAKCVLTHSPTWIIDPIDGTCNFVHRFPTVAVSIGFAVRQELEFGVI 133
P F+ EE+ + +I+DP+DGT NF+H P AVSI + ++ GVI
Sbjct: 66 PKFGFLMEESEEIIGEDSQ---HRFIVDPLDGTTNFLHGIPFFAVSIALESQGKIVAGVI 122
Query: 134 YHCTEERLYTGRRGRGAFCNGQRLRVSGETDLSKALVLTEIGPKRDPATLKLFLSNMERL 193
Y+ + L+T RG GAF N +R RVS L ++ T + P +L + +
Sbjct: 123 YNPINDELFTAERGSGAFFNDRRCRVSARRRLEDCVIATGM-PHLGRPGHGTYLIELRNV 181
Query: 194 LHAKAHGVRVIGSSTLALCHLASGAADAYYQFGLHCWDLAAATVIIREAGGIVIDTSGGP 253
+ A+ G+R G++ L L ++A+G D +++ L WD+AA +++REAGG V D GG
Sbjct: 182 M-AEVSGIRRFGTAALDLAYVAAGRTDGFWEDNLQIWDMAAGILMVREAGGFVTDKEGGN 240
Query: 254 LDLMACRVVAASTREMAMLIAQALQ 278
D+ + + A + + + +AL+
Sbjct: 241 -DIFRKKNIIAGNEHIRIKLERALK 264
>2PCR-A nrPDB
Length = 264
Score = 243 bits (619), Expect = 9e-65, Method: Composition-based stats.
Identities = 74/258 (28%), Positives = 125/258 (48%), Gaps = 11/258 (4%)
Query: 20 FQAAVQLALRAGQIIRKALTEEKRVSTKTSA-ADLVTETDHLVEDLIISELRERFPSHRF 78
+ A AL GQ++++ + K+ + + D V+ D E+ I + + FP H
Sbjct: 8 LEVAKIAALAGGQVLKENFGKVKKENIEEKGEKDFVSYVDKTSEERIKEVILKFFPDHEV 67
Query: 79 IAEEAAASGAKCVLTHSPTWIIDPIDGTCNFVHRFPTVAVSIGFAVRQELEFGVIYHCTE 138
+ EE A G W IDP+DGT N+++ FP AVS+G +E G +Y
Sbjct: 68 VGEEMGAEG----SGSEYRWFIDPLDGTKNYINGFPIFAVSVGLVKGEEPIVGAVYLPYF 123
Query: 139 ERLYTGRRGRGAFCNGQRLRVSGETDLSKALVLTEIGPKRDPATLKLFLSNMERLLHAKA 198
++LY G +G GA+ NG+R++V L A V+ P R + ++L N+ + + +
Sbjct: 124 DKLYWGAKGLGAYVNGKRIKVKDNESLKHAGVVYGF-PSRSRRDISIYL-NIFKDVFYEV 181
Query: 199 HGVRVIGSSTLALCHLASGAADAYYQFGLHCWDLAAATVIIREAGGIVIDTSGGPLDLMA 258
+R G++ + LC +A G D +F + WD+ A VI++EAGG+ G P +
Sbjct: 182 GSMRRPGAAAVDLCMVAEGIFDGMMEFEMKPWDITAGLVILKEAGGVYT-LVGEPFGVSD 240
Query: 259 CRVVAASTREMAMLIAQA 276
+ A + + I Q
Sbjct: 241 ---IIAGNKALHDFILQV 255
>2P3V-A nrPDB
Length = 256
Score = 236 bits (602), Expect = 9e-63, Method: Composition-based stats.
Identities = 70/248 (28%), Positives = 120/248 (48%), Gaps = 14/248 (5%)
Query: 18 ECFQAAVQLALRAGQIIRKALTEEKRVSTKTSAADLVTETDHLVEDLIISELRERFPSHR 77
+ +++L + G ++ V KT D+VTE D + +I+ E+R+ FP
Sbjct: 2 DRLDFSIKLLRKVGHLLMIHWGRVDNVEKKTGFKDIVTEIDREAQRMIVDEIRKFFPDEN 61
Query: 78 FIAEEAAASGAKCVLTHSPTWIIDPIDGTCNFVHRFPTVAVSIGFAVRQELEFGVIYHCT 137
+AEE WIIDPIDGT NFVH P ++S+ + E++ GV++
Sbjct: 62 IMAEEGIFEKG------DRLWIIDPIDGTINFVHGLPNFSISLAYVENGEVKLGVVHAPA 115
Query: 138 EERLYTGRRGRGAFCNGQRLRVSGETDLSKALVLTEIGPKRDPATLKLFLSNMERLLHAK 197
G GAF NG+R+RVS L + + T F+ ME+ +
Sbjct: 116 LNETLYAEEGSGAFFNGERIRVSENASLEECVGSTGSYVDFT----GKFIERMEK----R 167
Query: 198 AHGVRVIGSSTLALCHLASGAADAYYQFGLHCWDLAAATVIIREAGGIVIDTSGGPLDLM 257
+R++GS+ L ++ +G D + + ++ WD+AA +I++EAGG+V D SG +
Sbjct: 168 TRRIRILGSAALNAAYVGAGRVDFFVTWRINPWDIAAGLIIVKEAGGMVTDFSGKEANAF 227
Query: 258 ACRVVAAS 265
+ + ++
Sbjct: 228 SKNFIFSN 235
>4N81-A nrPDB
Length = 259
Score = 233 bits (594), Expect = 7e-62, Method: Composition-based stats.
Identities = 60/273 (21%), Positives = 100/273 (36%), Gaps = 20/273 (7%)
Query: 11 LAAGPWEECFQAAVQLALRAGQIIRKALTEEKRVSTKTSAADLVTETDHLVEDLIISELR 70
++ +E+ + A +LA A IIR + K + VT+ D E + + L
Sbjct: 1 MSRSAYEDDIRLAHRLADVAADIIRPFFRAPLTIDLKADHS-PVTKADRGAEQAMRAILE 59
Query: 71 ERFPSHRFIAEEAAASGAKCVLTHSPTWIIDPIDGTCNFVHRFPTVAVSIGFAVRQELEF 130
+ P EE S W++DPIDGT F+ + I
Sbjct: 60 QERPEDGIFGEEMGVSRP----DARRLWVLDPIDGTRAFIGGRASFGTLIALVEDGRPVL 115
Query: 131 GVIYHCTEERLYTGRRGRGAFCNGQRLRVSGETDLSKALVLTEIGPKRDPATLKLFLSNM 190
G+I + + G + NG+ + L AL+ T +L
Sbjct: 116 GIINQPIHQERWVGVKDLPTSFNGEVIHTRSCPALDHALLATT----------SPWLFEK 165
Query: 191 ERLLHAKAHGVR----VIGSSTLALCHLASGAADAYYQFGLHCWDLAAATVIIREAGGIV 246
E +H ++ ++G L+ G D + GL +D AA I+ AGGI+
Sbjct: 166 EGEVHFDKIRLKCRDTLLGGDCYNYGLLSLGHCDLVVEQGLKFYDFAALVPIVEGAGGIM 225
Query: 247 IDTSGGPLDLMA-CRVVAASTREMAMLIAQALQ 278
D PL+ + V+AA + A++
Sbjct: 226 RDWQNRPLNKNSVGEVIAAGDHHLIEPALSAME 258
>5EQA-A nrPDB
Length = 277
Score = 232 bits (591), Expect = 2e-61, Method: Composition-based stats.
Identities = 70/273 (25%), Positives = 110/273 (40%), Gaps = 25/273 (9%)
Query: 21 QAAVQLALRAGQIIRKALTEEKRVSTKTSAADLVTETDHLVEDLIISELRERFPSHRFIA 80
A + A AG +IRK + + VT D E+ ++S + + FPSH
Sbjct: 19 DVANKAANAAGDVIRKYFRKNNFDIIHKNDLSPVTIADQSAEEAMVSVILDNFPSHAVYG 78
Query: 81 EEAAASGAKCVLTH-SPTWIIDPIDGTCNFVHRFPTVAVSIGFAVRQELEFGVIYHCTEE 139
EE G +C W++DPIDGT +F+ P I G+I +
Sbjct: 79 EE---KGWRCKQDSADYVWVLDPIDGTKSFITGKPLFGTLIALLQNGTPILGIIDQPVLK 135
Query: 140 RLYTGRRGRGAFCNGQRLRVSGETDLSKALVLTEIGPKRDPATLKLFLSNMERLLHAKAH 199
+ G G+ NGQ + DLS+A + T + LF + E
Sbjct: 136 ERWIGITGKRTTLNGQEVSTRTCADLSQAYLYTT--------SPHLFSGDAEEAFIRVRD 187
Query: 200 GVRV--IGSSTLALCHLASGAADAYYQFGLHCWDLAAATVIIREAGGIVIDTSG------ 251
V++ G A L+SG D + GL +D A +I +GG++ D G
Sbjct: 188 KVKIPLYGCDCYAYALLSSGFVDLVVESGLKPYDFLALIPVIEGSGGVITDWKGHQLRWE 247
Query: 252 -GPLDL-MACRVVAASTREMAMLIAQALQTINY 282
PL + + VVAA +++ QAL ++ +
Sbjct: 248 ASPLSIATSFNVVAAGDKQIHQ---QALDSLQW 277
>1VDW-A nrPDB
Length = 254
Score = 204 bits (520), Expect = 2e-53, Method: Composition-based stats.
Identities = 64/267 (23%), Positives = 115/267 (43%), Gaps = 30/267 (11%)
Query: 21 QAAVQLALRAGQIIRKALTEEKRVSTKT--SAADLVTETDHLVEDLIISELRERFPSHRF 78
+ A+ + I K T + + D D + E++IIS+ ++
Sbjct: 8 KIAIDIIRDFDHNIMPLFGNPKASETISISPSGDETKVVDKVAENIIISKFKDL--GVNV 65
Query: 79 IAEEAAASGAKCVLTHSPTWIIDPIDGTCNFVHRFPTVAVSIGFAVRQELEFGVIYHCTE 138
++EE + T ++DP+DG+ NF++ P AVS+ ++ + IY
Sbjct: 66 VSEEIG----RIDQGSDYTVVVDPLDGSYNFINGIPFFAVSVAIFHEKDPIYAFIYEPIV 121
Query: 139 ERLYTGRRGRGAFCNGQRLRVSGETDLSKALVLTEIGPKRDPATLKLFLSNMERLLHAKA 198
ERLY G G+G++ NG++++V + ++ + + K
Sbjct: 122 ERLYEGIPGKGSYLNGEKIKVRELAE---------------KPSISFYTKGKGTKIIDKV 166
Query: 199 HGVRVIGSSTLALCHLASGAADAYYQFG--LHCWDLAAATVIIREAGGIVIDTSGGPLDL 256
R +G+ L L +LA GA DA L D+AA VI REAG IV D G +++
Sbjct: 167 KRTRTLGAIALELAYLARGALDAVVDIRNYLRPTDIAAGVVIAREAGAIVKDLDGKDVEI 226
Query: 257 M-----ACRVVAASTREMAMLIAQALQ 278
++AA+ E+ I ++++
Sbjct: 227 TFSATEKVNIIAANNEELLETILRSIE 253
>1XI6-A nrPDB
Length = 262
Score = 199 bits (506), Expect = 1e-51, Method: Composition-based stats.
Identities = 64/267 (23%), Positives = 111/267 (41%), Gaps = 29/267 (10%)
Query: 21 QAAVQLALRAGQIIRKALTEEK--RVSTKTSAADLVTETDHLVEDLIISELRERFPSHRF 78
+ A+ + I ++ + + D D L EDLI+S + E
Sbjct: 16 EVAIDIISDFETTIMPFFGNPDGGKLVKISPSGDETKLVDKLAEDLILSRITEL--GVNV 73
Query: 79 IAEEAAASGAKCVLTHSPTWIIDPIDGTCNFVHRFPTVAVSIGFAVRQELEFGVIYHCTE 138
++EE + T I+DP+DG+ NF+ P A+S+ + + + +IY
Sbjct: 74 VSEEVGVIDNES----EYTVIVDPLDGSYNFIAGIPFFALSLAVFKKDKPIYAIIYEPMT 129
Query: 139 ERLYTGRRGRGAFCNGQRLRVSGETDLSKALVLTEIGPKRDPATLKLFLSNMERLLHAKA 198
ER + G G GAF NG+R++V D ++ G +
Sbjct: 130 ERFFEGIPGEGAFLNGKRIKVRKTPDEKPSISFYSRG--------------KGHEIVKHV 175
Query: 199 HGVRVIGSSTLALCHLASGAADAYYQFG--LHCWDLAAATVIIREAGGIVIDTSGGPLDL 256
R +G+ L L +LA GA D + D+AA T+I +EAG ++ D++G +D+
Sbjct: 176 KRTRTLGAIALELAYLAMGALDGVVDVRKYVRPTDIAAGTIIAKEAGALIKDSAGKDIDI 235
Query: 257 M-----ACRVVAASTREMAMLIAQALQ 278
V+A ++ E+ I L+
Sbjct: 236 SFNATDRLDVIAVNSEELLKTILSLLE 262
>4O7I-A nrPDB
Length = 325
Score = 195 bits (495), Expect = 2e-50, Method: Composition-based stats.
Identities = 73/319 (22%), Positives = 117/319 (36%), Gaps = 67/319 (21%)
Query: 20 FQAAVQLALRAGQIIRKA--------LTEEKRVSTKTSAADLVTETDHLVEDLIISELRE 71
F + LAL Q+ K LT++ ++ S VT D+ V+ + ++ E
Sbjct: 3 FDKELALALEIVQVSCKITTSVAEHTLTDQTQIKNDKSP---VTVGDYSVQAYVNKKIHE 59
Query: 72 RFPSHRFIAEEAA--------ASGAKCVLTHSPT---------------------WIIDP 102
FP + +AEE A K V +S W++DP
Sbjct: 60 TFPEDQIVAEEDTKTIPEDIFAKVCKHVQIYSDMKDDEIRKSIDLGNSTGGKGRHWVLDP 119
Query: 103 IDGTCNFVHRFPTVAVSIGFAVRQELEFGVIYHCTEE--RLYTGRRGRGA-------FCN 153
IDGT F+ R AV + F + +++ GV+ E + ++G GA N
Sbjct: 120 IDGTLGFLRR-EQYAVCLAFMIDGDIKVGVLGCPNFEGGLIVAAQKGCGAKMFSVNDIKN 178
Query: 154 GQRLRVSGETDLSKALVLTEIGPKRDPATLKLFLSNMERLLHAKAHGVRVIGSSTLALCH 213
G+ + VS S + + ++ L VR+ S
Sbjct: 179 GKDIHVSTTPKTSDMCFCESVEVSHTDQSRSKTITER---LQVTKPPVRM--DSQCKYMA 233
Query: 214 LASGAADAYYQ------FGLHCWDLAAATVIIREAGGIVIDTSGGPLDLMACRV------ 261
+ASG AD Y + + WD AA +I++EAGG V D G LD R
Sbjct: 234 IASGRADVYLRLPRNLSYQEKIWDHAAGYLIVKEAGGKVTDIYGNDLDFSLGRTLCNNHG 293
Query: 262 VAASTREMAMLIAQALQTI 280
+ AS + ++ +
Sbjct: 294 IVASNGILHEETVNVVKDV 312
>1G0H-A nrPDB
Length = 252
Score = 189 bits (481), Expect = 8e-49, Method: Composition-based stats.
Identities = 60/261 (22%), Positives = 114/261 (43%), Gaps = 27/261 (10%)
Query: 26 LALRAGQIIRKALTEEKR--VSTKTSAADLVTETDHLVEDLIISELRERFPSHRFIAEEA 83
+A + I + + V + + D D + ED+ + L+ + ++EE
Sbjct: 10 IAKEIEKEILPYFGRKDKSYVVGTSPSGDETEIFDKISEDIALKYLKSL--NVNIVSEEL 67
Query: 84 AASGAKCVLTHSPTWIIDPIDGTCNFVHRFPTVAVSIGFAVRQELEFGVIYHCTEERLYT 143
T +IDPIDG+ NF++ P A G E +G+ Y + Y
Sbjct: 68 GVIDNSS----EWTVVIDPIDGSFNFINGIPFFAFCFGVFKNNEPYYGLTYEFLTKSFYE 123
Query: 144 GRRGRGAFCNGQRLRVSGETDLSKALVLTEIGPKRDPATLKLFLSNMERLLHAKAHGVRV 203
+G+GA+ NG++++V D + ++ P + ++E+ L K VR+
Sbjct: 124 AYKGKGAYLNGRKIKVK---DFNPNNIVISYYPSKK--------IDLEK-LRNKVKRVRI 171
Query: 204 IGSSTLALCHLASGAADAYYQFGLHC--WDLAAATVIIREAGGIVIDTSGGPLDL----- 256
G+ L +C++A G DA + D+A++ +I +EAG ++ D +G L
Sbjct: 172 FGAFGLEMCYVAKGTLDAVFDVRPKVRAVDIASSYIICKEAGALITDENGDELKFDLNAT 231
Query: 257 MACRVVAASTREMAMLIAQAL 277
++ A+++EM +I L
Sbjct: 232 DRLNIIVANSKEMLDIILDLL 252
>1JP4-A nrPDB
Length = 308
Score = 187 bits (475), Expect = 4e-48, Method: Composition-based stats.
Identities = 73/271 (26%), Positives = 101/271 (37%), Gaps = 52/271 (19%)
Query: 22 AAVQLALRAGQIIRKALTE-EKRVSTKTSAADLVTETDHLVEDLIISELRERFPSHRFIA 80
+A +A +AG I+R + E + + KTSA DL T+ D +V+ I S L +FP I
Sbjct: 14 SAYSIAQKAGTIVRCVIAEGDLGIVQKTSATDLQTKADRMVQMSICSSLSRKFPKLTIIG 73
Query: 81 EEAAASGA-----------------KCVLTHSP-------TWIIDPIDGTCNFVHR-FPT 115
EE G C +S W+ DP+DGT +
Sbjct: 74 EEDLPPGEVDQELIEDGQSEEILKQPCPSQYSAIKEEDLVVWV-DPVDGTKEYTEGLLDN 132
Query: 116 VAVSIGFAVRQELEFGVIYHCTEE----------RLYTGRRGRGAFCNGQRLRVSGETDL 165
V V IG A + G+I R G G GAF G +L+ E
Sbjct: 133 VTVLIGIAYEGKAIAGIINQPYYNYQAGPDAVLGRTIWGVLGLGAF--GFQLK---EAPA 187
Query: 166 SKALVLTEIGPKRDPATLKLFLSNMERLLHAKAHGVRVIGSSTLALCHLASGAADAYYQF 225
K ++ T T + N + +L G ++I L G A AY
Sbjct: 188 GKHIITTTRSHSNKLVTDCIAAMNPDNVLRVGGAGNKII--------QLIEGKASAYVFA 239
Query: 226 GLHC--WDLAAATVIIREAGGIVIDTSGGPL 254
C WD A VI+ GG + D G PL
Sbjct: 240 SPGCKKWDTCAPEVILHAVGGKLTDIHGNPL 270
>5YHT-A nrPDB
Length = 267
Score = 187 bits (474), Expect = 5e-48, Method: Composition-based stats.
Identities = 70/241 (29%), Positives = 100/241 (41%), Gaps = 18/241 (7%)
Query: 18 ECFQAAVQLALRAGQIIRKALTE-EKRVSTKTSAADLVTETDHLVEDLIISELRERFPSH 76
+ A+ LA RA ++ R + R+ TK VT+ D VE + L P
Sbjct: 11 DDLMLALALADRADELTRVRFGALDLRIDTKPDLT-PVTDADRAVESDVRQTLGRDRPGD 69
Query: 77 RFIAEEAAASGAKCVLTHSPTWIIDPIDGTCNFVHRFPTVAVSIGFAVRQELEFGVIYHC 136
+ EE G T WI+DPIDGT NFV P A I GV+
Sbjct: 70 GVLGEE---FGGSTTFTGR-QWIVDPIDGTKNFVRGVPVWASLIALLEDGVPSVGVVSAP 125
Query: 137 TEERLYTGRRGRGAFCN-----GQRLRVSGETDLSKALVLTEIGPK-RDPATLKLFLSNM 190
+R + RGRGAF + RL VS +L A + P + F+
Sbjct: 126 ALQRRWWAARGRGAFASVDGARPHRLSVSSVAELHSASLSFSSLSGWARPGLRERFIGLT 185
Query: 191 ERLLHAKAHGVRVIGSSTLALCHLASGAADAYYQFGLHCWDLAAATVIIREAGGIVIDTS 250
+ + +A+G L+ C +A GA D + + WDLAA +++REAGG +
Sbjct: 186 DTVWRVRAYG------DFLSYCLVAEGAVDIAAEPQVSVWDLAALDIVVREAGGRLTSLD 239
Query: 251 G 251
G
Sbjct: 240 G 240
>3QMF-A nrPDB
Length = 273
Score = 186 bits (472), Expect = 9e-48, Method: Composition-based stats.
Identities = 58/250 (23%), Positives = 99/250 (39%), Gaps = 20/250 (8%)
Query: 32 QIIRKALTEEKRVSTKTSAADLVTETDHLVEDLIISELRERFPSHRFIAEEAAASGAKCV 91
Q+I + TE TK DLVT D ++ L FP H+ +AEE + +
Sbjct: 34 QLIMEMTTE-----TKRHRFDLVTNVDKQIQQQFQQFLATYFPEHQLLAEEKSNAMITNE 88
Query: 92 LTHSPTWIIDPIDGTCNFVHRFPTVAVSIGFAVRQELEFGVIYHCTEERLYTGRRGRGAF 151
+ H WI+DPIDGT N V + + + + + +Y ++LY RG GAF
Sbjct: 89 INH--LWIMDPIDGTANLVKQQEDYCIILAYFYEGKPMLSYVYDYPHKKLYKAIRGEGAF 146
Query: 152 CNGQRLRVSGETDLSKALVLTEIGPKRDPATLKLFLSNMERL--LHAKAHGVRVIGSSTL 209
CNG ++ L A++ + + N++ + L + R++G+ L
Sbjct: 147 CNGIKMEEPPSLKLEDAII-----------SFNAQVMNLDTVQDLFDASFSYRLVGACGL 195
Query: 210 ALCHLASGAADAYYQFGLHCWDLAAATVIIREAGGIVIDTSGGPLDLMACRVVAASTREM 269
+A G A+ WD+AA + + G +D + S +
Sbjct: 196 DSMRVAKGQFGAHINTNPKPWDIAAQFLFAELLNLKMTTLDGKAIDHLKGAPFIISNKAC 255
Query: 270 AMLIAQALQT 279
+ + L
Sbjct: 256 HETVLKILNA 265
>2WEF-A nrPDB
Length = 311
Score = 182 bits (461), Expect = 2e-46, Method: Composition-based stats.
Identities = 72/271 (26%), Positives = 99/271 (36%), Gaps = 52/271 (19%)
Query: 22 AAVQLALRAGQIIRKALTE-EKRVSTKTSAADLVTETDHLVEDLIISELRERFPSHRFIA 80
+A +A +AG I+R+ + E + + KT A DL T+ D L + I S L +FP I
Sbjct: 10 SAYSIAQKAGMIVRRVIAEGDLGIVEKTCATDLQTKADRLAQMSICSSLARKFPKLTIIG 69
Query: 81 EEAAAS-----------------GAKCVLTHSP-------TWIIDPIDGTCNFVHR-FPT 115
EE S C +S W+ DP+DGT +
Sbjct: 70 EEDLPSEEVDQELIEDSQWEEILKQPCPSQYSAIKEEDLVVWV-DPLDGTKEYTEGLLDN 128
Query: 116 VAVSIGFAVRQELEFGVIYHCTEE----------RLYTGRRGRGAFCNGQRLRVSGETDL 165
V V IG A + GVI R G G GAF G +L+ E
Sbjct: 129 VTVLIGIAYEGKAIAGVINQPYYNYEAGPDAVLGRTIWGVLGLGAF--GFQLK---EVPA 183
Query: 166 SKALVLTEIGPKRDPATLKLFLSNMERLLHAKAHGVRVIGSSTLALCHLASGAADAYYQF 225
K ++ T T + N + +L G ++I L G A AY
Sbjct: 184 GKHIITTTRSHSNKLVTDCVAAMNPDAVLRVGGAGNKII--------QLIEGKASAYVFA 235
Query: 226 GLHC--WDLAAATVIIREAGGIVIDTSGGPL 254
C WD A VI+ GG + D G L
Sbjct: 236 SPGCKKWDTCAPEVILHAVGGKLTDIHGNVL 266
>4QXD-A nrPDB
Length = 293
Score = 172 bits (437), Expect = 1e-43, Method: Composition-based stats.
Identities = 56/258 (21%), Positives = 98/258 (37%), Gaps = 45/258 (17%)
Query: 21 QAAVQLALRAGQIIRKALTEEKRVSTKTSAADLVTETDHLVEDLIISELRERFPSHRFIA 80
+ A I K EE + K+ ++ VT+ D + +I S ++ ++P+ I
Sbjct: 10 NVLITAVKEASYSISK-FKEEVEIKYKSDGSE-VTQVDTQSQQIIFSIIKNKYPTINIIG 67
Query: 81 EEAAASGAKCVLTHSPTWI------------------IDPIDGTCNFVH-RFPTVAVSIG 121
EE +G + T + +DP+DGT + H ++ +V V +G
Sbjct: 68 EEDVENGIPDNQLPTITQLSFGSLENKIININDIIIYVDPLDGTDCYTHKQYDSVCVLVG 127
Query: 122 FAVRQELEFGVIYHCTEERLYTGRRGRGAFCNGQRLRVSGETDLSKALVLTEIGPKRDPA 181
+ + G++ F N + + + E +S + P D
Sbjct: 128 VTYKGKPMIGIVSKP--------------FYNNE-ITFAIENYISS----ISLQPLNDKI 168
Query: 182 TLKLFLSN-MERLLHA--KAHGVRVIGSSTLALCHLASGAADAYYQFGLHC--WDLAAAT 236
N ++ L+ + + V+ G S + + AD YY + WD AA
Sbjct: 169 IFVCSKKNDIQHLIKSFPDPYEVKYKGGSGAKMMAIIHQEADIYYHPLIQSCTWDTLAAQ 228
Query: 237 VIIREAGGIVIDTSGGPL 254
VI+ GGIV D G PL
Sbjct: 229 VILEAQGGIVCDIYGNPL 246
>2Q74-A nrPDB
Length = 299
Score = 168 bits (426), Expect = 2e-42, Method: Composition-based stats.
Identities = 85/255 (33%), Positives = 114/255 (44%), Gaps = 14/255 (5%)
Query: 34 IRKALTEEKRVSTKTSAADLVTETDHLVEDLIISELRERFPSHRFIAEEAA-ASGAKCVL 92
I +A + V K+S D VT D E L+ L + P + EE +
Sbjct: 36 ISRAGDGDGAVRAKSSPTDPVTVVDTDTERLLRDRLAQLRPGDPILGEEGGGPADVTATP 95
Query: 93 THSPTWIIDPIDGTCNFVHRFPTVAVSIGFAVRQELEFGVIYHCTEERLYTGRRGRGAFC 152
+ TW++DPIDGT NFV+ P AVSIG V G + +Y+ G GA
Sbjct: 96 SDRVTWVLDPIDGTVNFVYGIPAYAVSIGAQVGGITVAGAVADVAARTVYSAATGLGAHL 155
Query: 153 NGQR----LRVSGETDLSKALVLTEIGPKRDPATLKLFLSNMERLLHAKA--HGVRVIGS 206
+R LR +G +LS AL+ T G ++ E L H VR IGS
Sbjct: 156 TDERGRHVLRCTGVDELSMALLGTGFGYS-----VRCREKQAELLAHVVPLVRDVRRIGS 210
Query: 207 STLALCHLASGAADAYYQFGLHCWDLAAATVIIREAGGIVIDTSGGPLDLMACRVVAAST 266
+ L LC +A+G DAYY+ G+ WD AA +I EAG V P A VV A+
Sbjct: 211 AALDLCMVAAGRLDAYYEHGVQVWDCAAGALIAAEAGARV--LLSTPRAGGAGLVVVAAA 268
Query: 267 REMAMLIAQALQTIN 281
+A + ALQ N
Sbjct: 269 PGIADELLAALQRFN 283
>3B8B-A nrPDB
Length = 292
Score = 167 bits (422), Expect = 6e-42, Method: Composition-based stats.
Identities = 61/227 (26%), Positives = 92/227 (40%), Gaps = 19/227 (8%)
Query: 22 AAVQLALRAGQIIRKALTEEKRVSTKTSAAD--LVTETDHLVEDLIISELRER-FPSHRF 78
AA+ AL+AG+ I + K AD +T D + I++ L E FP
Sbjct: 26 AAIDAALKAGEKILSIYEDPKSDFEIERKADNSPLTIADRKAHEAIVAILNETPFP---V 82
Query: 79 IAEEAAASGAKCVLTHSPTWIIDPIDGTCNFVHRFPTVAVSIGFAVRQELEFGVIYHCTE 138
++EE WI+DP+DGT F+ R V+I GVIY +
Sbjct: 83 LSEEGKHMDYAVRRGWDTLWIVDPLDGTKEFIKRNGEFTVNIALVQNAVPVMGVIYVPVK 142
Query: 139 ERLYTGRRGRGAF-CNGQRLRVSGETDLSKALVLTEIGPKRDPATLKLFLSNMERL---- 193
+ LY G GA+ C+G L + + +E P D + +++ L
Sbjct: 143 KELYFAVEGTGAYKCSGIVGLEDEGVTLQQMIEKSERMPLADARDHFIAVASRSHLTPET 202
Query: 194 ------LHAKAHGVRVIGS-STLALCHLASGAADAYYQFGLHC-WDL 232
L K V +I S S++ +C +A G AD Y +F WD
Sbjct: 203 ETYIADLKKKHGNVELISSGSSIKICLVAEGKADVYPRFAPTMEWDT 249
>1KA0-A nrPDB
Length = 357
Score = 162 bits (410), Expect = 1e-40, Method: Composition-based stats.
Identities = 68/348 (19%), Positives = 107/348 (30%), Gaps = 104/348 (29%)
Query: 22 AAVQLALRAGQIIRKALTEE----KRVSTKTSAADLVTETDHLVEDLIISELRERFPSHR 77
A Q +A + ++ +E + + VT D+ + +II+ ++ FP +
Sbjct: 9 VATQAVRKASLLTKRIQSEVISHKDSTTITKNDNSPVTTGDYAAQTIIINAIKSNFPDDK 68
Query: 78 FIAEEAAA--------------------------------------------------SG 87
+ EE+++ G
Sbjct: 69 VVGEESSSGLSDAFVSGILNEIKANDEVYNKNYKKDDFLFTNDQFPLKSLEDVRQIIDFG 128
Query: 88 AKCVLTHSPTWIIDPIDGTCNFVHRFPTVAVSIGFAVRQELEFGVIYHC----------- 136
W +DPIDGT F+ AV + V ++ G I
Sbjct: 129 NYEGGRKGRFWCLDPIDGTKGFLRG-EQFAVCLALIVDGVVQLGCIGCPNLVLSSYGAQD 187
Query: 137 -----TEERLYTGRRGRGAFCNGQ-------RLRVSGETDLSKALVLTEIG---PKRDPA 181
+ ++ RG GAF + ++ V D + L + D
Sbjct: 188 LKGHESFGYIFRAVRGLGAFYSPSSDAESWTKIHVRHLKDTKDMITLEGVEKGHSSHDEQ 247
Query: 182 TLKLFLSNMERLLHAKAHGVRVIGSSTLALCHLASGAADAYYQFGLH------CWDLAAA 235
T N+ + LH S C LA G AD Y + + WD AA
Sbjct: 248 TAIKNKLNISKSLHLD---------SQAKYCLLALGLADVYLRLPIKLSYQEKIWDHAAG 298
Query: 236 TVIIREAGGIVIDT-SGGPLDLMACRVVAA-------STREMAMLIAQ 275
VI+ EAGGI D PLD R +A RE+ L+
Sbjct: 299 NVIVHEAGGIHTDAMEDVPLDFGNGRTLATKGVIASSGPRELHDLVVS 346
>1LBZ-A nrPDB
Length = 252
Score = 157 bits (397), Expect = 5e-39, Method: Composition-based stats.
Identities = 59/275 (21%), Positives = 105/275 (38%), Gaps = 43/275 (15%)
Query: 21 QAAVQLALR-AGQIIRKALTEEKRVSTK----TSAADLVTETDHLVEDLIISELRERFPS 75
+ A++++ AG++ + + R K D + ED + LR+
Sbjct: 4 RDALRISREIAGEVRKAIASMPLRERVKDVGMGKDGTPTKAADRVAEDAALEILRKER-- 61
Query: 76 HRFIAEEAAASGAKCVLTHSPTWIIDPIDGTCNFVHRFPTVAVSIGFAVRQELE---FGV 132
+ EE+ G V +DP+DGT N P +VS+ F+ +L+ FG
Sbjct: 62 VTVVTEESGVLGEGDVFVA-----LDPLDGTFNATRGIPVYSVSLCFSYSDKLKDAFFGY 116
Query: 133 IYHCTEERLYTGRRGRGAFCNGQRLRVSGETDLSKALVLTEIGPKRDPATLKLFLSNMER 192
+Y+ Y GA+ NG+R+ VS +L ++ P R
Sbjct: 117 VYNLATGDEYYA-DSSGAYRNGERIEVSDAEELYCNAIIYY--PDRK------------- 160
Query: 193 LLHAKAHGVRVIGSSTLALCHLASGAADAYYQFGL----HCWDLAAATVIIREAGGIVID 248
+R+ GS+ LC A G+ D + +D AA I +AGG V +
Sbjct: 161 ---FPFKRMRIFGSAATELCFFADGSFDCFLDIRPGKMLRIYDAAAGVFIAEKAGGKVTE 217
Query: 249 TSGGPL-----DLMACRVVAASTREMAMLIAQALQ 278
G L D+ + A+ ++ + + ++
Sbjct: 218 LDGESLGNKKFDMQERLNIVAANEKLHPKLLELIK 252
>5ESY-A nrPDB
Length = 346
Score = 141 bits (355), Expect = 3e-34, Method: Composition-based stats.
Identities = 61/329 (18%), Positives = 108/329 (32%), Gaps = 66/329 (20%)
Query: 8 QAALAAGPWEECFQAAVQLALRAGQIIRKALTEEKRVSTKTSAADLVTETD-----HLVE 62
+A L + + ++ V +A Q + + LV E D
Sbjct: 26 KALLQSDVQSKSDKSPVTVADYGSQAVVSL---VLEKELSSEPFSLVAEEDSGDLRKDGS 82
Query: 63 DLIISELRERFPSHRFIAEEA--------------AASGAKCVLTHSPTWIIDPIDGTCN 108
+ + + + EE+ G + W++DPIDGT
Sbjct: 83 QDTLERITKL-VNDTLATEESFNGSTLSTDDLLRAIDCGTSEGGPNGRHWVLDPIDGTKG 141
Query: 109 FVHRFPTVAVSIGFAVRQELEFGVIYHCTEER------------------LYTGRRGRGA 150
F+ AV++G ++ GV+ L+ G G
Sbjct: 142 FLRG-DQYAVALGLLEEGKVVLGVLACPNLPLASIAGNNKNKSSSDEIGCLFFATIGSGT 200
Query: 151 FC-------NGQRLRVSGETDLSKALVLTEIGPKRDPATLKLFLSNMERLLHAKAHGVRV 203
+ + +++VS + +A L S++ L KA VR+
Sbjct: 201 YMQLLDSKSSPVKVQVSSVENPEEASFFESFEGAHSLHDLS---SSIANKLGVKAPPVRI 257
Query: 204 IGSSTLALCHLASGAADAYYQF-----GLHCWDLAAATVIIREAGGIVIDTSGGPLDLMA 258
S L+ G Y +F WD A +++ EAGGIV D +G PLD
Sbjct: 258 --DSQAKYGALSRGDGAIYLRFPHKGYREKIWDHVAGAIVVTEAGGIVTDAAGKPLDFSK 315
Query: 259 CR-------VVAASTREMAMLIAQALQTI 280
+ ++ A+ + M +L+ +I
Sbjct: 316 GKYLDLDTGIIVANEKLMPLLLKAVRDSI 344
>5DJK-A nrPDB
Length = 288
Score = 80.9 bits (198), Expect = 5e-16, Method: Composition-based stats.
Identities = 47/213 (22%), Positives = 67/213 (31%), Gaps = 33/213 (15%)
Query: 56 ETDHLVEDLIISELRERFPSHRFIAEEAAASGAKCVLTHSPTWIIDPIDGTCNF-VHRFP 114
D L++ L+ P ++EE A L WIIDP+DGT F
Sbjct: 69 AGDRQANSLLLRRLQAERPGDAVLSEE--AHDDLARLKSDRVWIIDPLDGTREFSTPGRD 126
Query: 115 TVAVSIGF---AVRQELEFGVIYHCTEERLYTGRRGRGAFCNGQRLRVSGETDLSKALVL 171
AV I + + + A G V
Sbjct: 127 DWAVHIALWRRSSNGQP-----------EITDAAVALPA---------RGNVVYRTDTVT 166
Query: 172 TEIGPKRDPATLKLFLS--NMERLLHAKAHGVRV----IGSSTLALCHLASGAADAYYQF 225
+ P P TL++ +S +LH + + IGS+ + G DAY
Sbjct: 167 SGAAPAGVPGTLRIAVSATRPPAVLHRIRQTLAIQPVSIGSAGAKAMAVIDGYVDAYLHA 226
Query: 226 GLH-CWDLAAATVIIREAGGIVIDTSGGPLDLM 257
G WD AA ++ AG G PL
Sbjct: 227 GGQWEWDSAAPAGVMLAAGMHASRLDGSPLRYN 259
>1INP-A nrPDB
Length = 400
Score = 64.4 bits (155), Expect = 6e-11, Method: Composition-based stats.
Identities = 39/195 (20%), Positives = 58/195 (29%), Gaps = 35/195 (17%)
Query: 90 CVLTHSPTWIIDPIDGTCNFVHR----------FPT----VAVSIGFA--VRQELEFGVI 133
W+ DPID T ++ FP+ V V IG GVI
Sbjct: 143 IPQDILGIWV-DPIDSTYQYIKGSADITPNQGIFPSGLQCVTVLIGVYDIQTGVPLMGVI 201
Query: 134 YHC-----TEERLYTGRRGRGAFCNGQRLR-----VSGETDLSKALVLTEIGPKRDPATL 183
R + G+ G G + VS ++ T+
Sbjct: 202 NQPFVSQDLHTRRWKGQCYWGLSYLGTNIHSLLPPVSTRSNSEAQSQGTQNPSSEGSCRF 261
Query: 184 KLFLSNMER------LLHAKAHGVRVIGSSTLALCHLASGAADAYYQFGLHC--WDLAAA 235
+ +S E+ L H + + + G AD Y WD AA
Sbjct: 262 SVVISTSEKETIKGALSHVCGERIFRAAGAGYKSLCVILGLADIYIFSEDTTFKWDSCAA 321
Query: 236 TVIIREAGGIVIDTS 250
I+R GG ++D
Sbjct: 322 HAILRAMGGGMVDLK 336
>2F3D-A nrPDB
Length = 338
Score = 39.3 bits (90), Expect = 0.002, Method: Composition-based stats.
Identities = 16/59 (27%), Positives = 26/59 (44%), Gaps = 1/59 (1%)
Query: 51 ADLVTETDHLVEDLIISELRERFPSHRFIAEEAAASGAKCVLT-HSPTWIIDPIDGTCN 108
D V + D L DL+I+ L+ F + ++EE + DP+DG+ N
Sbjct: 68 GDQVKKLDVLSNDLVINVLKSSFATCVLVSEEDKNAIIVEPEKRGKYVVCFDPLDGSSN 126
>2FHY-A nrPDB
Length = 374
Score = 38.9 bits (89), Expect = 0.002, Method: Composition-based stats.
Identities = 15/59 (25%), Positives = 26/59 (44%), Gaps = 1/59 (1%)
Query: 51 ADLVTETDHLVEDLIISELRERFPSHRFIAEEAAASGAKCVLT-HSPTWIIDPIDGTCN 108
D V + D L DL+++ L+ F + ++EE + DP+DG+ N
Sbjct: 104 GDQVKKLDVLSNDLVMNMLKSSFATCVLVSEEDKHAIIVEPEKRGKYVVCFDPLDGSSN 162
>1BK4-A nrPDB
Length = 337
Score = 38.2 bits (87), Expect = 0.005, Method: Composition-based stats.
Identities = 15/59 (25%), Positives = 26/59 (44%), Gaps = 1/59 (1%)
Query: 51 ADLVTETDHLVEDLIISELRERFPSHRFIAEEAAASGAKCVLT-HSPTWIIDPIDGTCN 108
D V + D L DL+++ L+ F + ++EE + DP+DG+ N
Sbjct: 67 GDQVKKLDVLSNDLVMNMLKSSFATCVLVSEEDKNAIIVEPEKRGKYVVCFDPLDGSSN 125
>5Q0C-A nrPDB
Length = 339
Score = 35.9 bits (81), Expect = 0.022, Method: Composition-based stats.
Identities = 14/59 (23%), Positives = 25/59 (42%), Gaps = 1/59 (1%)
Query: 51 ADLVTETDHLVEDLIISELRERFPSHRFIAEEAAASGAKCVLT-HSPTWIIDPIDGTCN 108
D V + D L L+I+ L+ + + ++EE + DP+DG+ N
Sbjct: 68 GDEVKKLDVLSNSLVINMLQSSYSTCVLVSEENKDAIITAKEKRGKYVVCFDPLDGSSN 126
>2QVR-A nrPDB
Length = 332
Score = 34.3 bits (77), Expect = 0.054, Method: Composition-based stats.
Identities = 39/247 (15%), Positives = 68/247 (27%), Gaps = 52/247 (21%)
Query: 81 EEAAASGAKCVLTHSPTWIIDPIDGTCNFVHRFPTVAVSIGFAV---------------- 124
EE + ++DP+DG+ N V VS+G
Sbjct: 90 EEDEIVVFEGCEHAKYVVLMDPLDGSSNI-----DVNVSVGTIFSIYRRVTPVGTPVTEE 144
Query: 125 ------RQELEFG-VIYHCTEERLYTGRRGRGAF----------CNGQRLRVSGETDLSK 167
+++ G V+Y + +YT G AF +R+R +
Sbjct: 145 DFLQPGNKQVAAGYVVYGSSTMLVYTTGCGVHAFTYDPSLGVFCLCQERMRFPEKGKTYS 204
Query: 168 ALVLTEIGPKRDPATLKLFLSNMERLLHAKAHGVRVIGSSTLALCH-LASGAADAYYQFG 226
I F ++ + + R IGS L G Y
Sbjct: 205 INEGNYIKFPNGVKKYIKFCQEEDKST-NRPYTSRYIGSLVADFHRNLLKGGIYLYPSTA 263
Query: 227 LHC-------WDLAAATVIIREAGGIVIDTSGGPLDLM-----ACRVVAASTREMAMLIA 274
H ++ + +AGG D LD++ R M +
Sbjct: 264 SHPDGKLRLLYECNPMAFLAEQAGGKASDGKERILDIIPETLHQRRSFFVGNDHMVEDVE 323
Query: 275 QALQTIN 281
+ ++
Sbjct: 324 RFIREFP 330
>5FGU-A nrPDB
Length = 567
Score = 33.5 bits (75), Expect = 0.11, Method: Composition-based stats.
Identities = 19/166 (11%), Positives = 55/166 (33%), Gaps = 4/166 (2%)
Query: 122 FAVRQELEFGVIYHCTEERLYTGRRGRGAFCNGQRLRVSGETDLSKALVLTEIGPKRDPA 181
+ G ++ + L G F N + + ++ + +
Sbjct: 349 LLSNGNVRNGYLFDRSG--LIADSLGGRPFRNN-LITGTRTQNVGNNDRKGGMQYIENKV 405
Query: 182 TLKLFLSNMERLLHAKAHGVRVIGSSTLALCHLASGAADAYYQFGLHCWDLAAATVIIRE 241
+ N + ++ KA V +++ ++D + + ++ A I +
Sbjct: 406 LDHI-KRNPKVHVYYKATPVYQGSELLPRAVLVSALSSDGFIDETVRVFNNVAGFNIDYQ 464
Query: 242 AGGIVIDTSGGPLDLMACRVVAASTREMAMLIAQALQTINYGRDDE 287
GG++ T+ ++ + + + E+ I T +D++
Sbjct: 465 NGGLLSSTADVDINNVEENEIETTDDEIEEGIENEPDTDALKKDNK 510
>1SPI-A nrPDB
Length = 358
Score = 32.8 bits (73), Expect = 0.19, Method: Composition-based stats.
Identities = 43/310 (13%), Positives = 84/310 (27%), Gaps = 59/310 (19%)
Query: 11 LAAGPWEECFQAAVQLALRAGQIIRKALTEEKRVSTKTSAADLVTETDHLVEDL------ 64
L P A + + L + + K + + + ++ + + ED
Sbjct: 27 LLKQPMAGVIDAELTIVLSSISLACKQIASLVQRAGISNLTGIQGAVNIQGEDQKKLDVV 86
Query: 65 ---IISELRERFPSHRFIA--EEAAASGAKCVLTHSPTWIIDPIDGTCN---FVHRFPTV 116
+ S IA EE + + + + DP+DG+ N V
Sbjct: 87 SNEVFSSCLRSSGRTGIIASEEEDVPVAVEESYSGNYIVVFDPLDGSSNIDAAVSTGSIF 146
Query: 117 AV--------------------------SIGFAVRQELEFGVIYH-CTEERLYTGRRGRG 149
+ + + Y + ++ G+G
Sbjct: 147 GIYSPNDECIVDSDHDDESQLSAEEQRCVVNVCQPGDNLLAAGYCMYSSSVIFVLTIGKG 206
Query: 150 AF------CNGQRLRVSGETDLSKALVLTEIGPKRDPATLKLFLSNMERLL----HAKAH 199
+ G+ + S + + KA + M+ L K +
Sbjct: 207 VYAFTLDPMYGEFVLTSEKIQIPKAGKIYSFNEGNYKMWPDKLKKYMDDLKEPGESQKPY 266
Query: 200 GVRVIGSSTLALCH-LASGAADAYYQFGLH-------CWDLAAATVIIREAGGIVIDTSG 251
R IGS L G Y + ++ A + I+ +AGG D
Sbjct: 267 SSRYIGSLVGDFHRTLLYGGIYGYPRDAKSKNGKLRLLYECAPMSFIVEQAGGKGSDGHQ 326
Query: 252 GPLDLMACRV 261
LD+ +
Sbjct: 327 RILDIQPTEI 336
>1DCU-A nrPDB
Length = 357
Score = 32.4 bits (72), Expect = 0.21, Method: Composition-based stats.
Identities = 31/230 (13%), Positives = 60/230 (26%), Gaps = 49/230 (21%)
Query: 81 EEAAASGAKCVLTHSPTWIIDPIDGTCNF--------VHRF--------PTVA------- 117
EE + + + + DP+DG+ N + P
Sbjct: 106 EEDVPVAVEESYSGNYIVVFDPLDGSSNLDAAVSTGSIFGIYSPNDECLPDFGDDSDDNT 165
Query: 118 -------VSIGFAVRQELEFGVIYH-CTEERLYTGRRGRGAF------CNGQRLRVSGET 163
+ Y + ++ G+G F G+ +
Sbjct: 166 LGTEEQRCIVNVCQPGSNLLAAGYCMYSSSVIFVLTIGKGVFVFTLDPLYGEFVLTQENL 225
Query: 164 DLSKALVLTEIGPKRDPATLKLFLSNMERLL----HAKAHGVRVIGSSTLALCH-LASGA 218
+ K+ + + ++ L K + R IGS L G
Sbjct: 226 QIPKSGKIYSFNEGNYKLWDENLKKYIDDLKEPGPSGKPYSARYIGSLVGDFHRTLLYGG 285
Query: 219 ADAYYQFGLH-------CWDLAAATVIIREAGGIVIDTSGGPLDLMACRV 261
Y + ++ A + I+ +AGG D LD+ +
Sbjct: 286 IYGYPRDKKSKNGKLRLLYECAPMSFIVEQAGGKGSDGHQRVLDIQPTEI 335
>5IZ1-A nrPDB
Length = 337
Score = 32.0 bits (71), Expect = 0.28, Method: Composition-based stats.
Identities = 21/93 (22%), Positives = 34/93 (36%), Gaps = 9/93 (9%)
Query: 18 ECFQAAVQLALRAGQIIRKALTEEKRVSTKTSAADLVTETDHLVEDLIISELRERFPSHR 77
C Q A L RAG L + + + D + ++ S LR +
Sbjct: 31 ACKQIA-SLVQRAGISNLTGLQGVANIQ-----GEDQKKLDVISNEVFSSCLRSSGRT-G 83
Query: 78 FIA--EEAAASGAKCVLTHSPTWIIDPIDGTCN 108
IA EE + + + + DP+DG+ N
Sbjct: 84 IIASEEEDTPVAVEESYSGNYIVVFDPLDGSSN 116
>6N9G-C nrPDB
Length = 353
Score = 32.0 bits (71), Expect = 0.33, Method: Composition-based stats.
Identities = 15/125 (12%), Positives = 36/125 (28%), Gaps = 3/125 (2%)
Query: 111 HRFPTVAVSIGFAVRQELEFGVIYHCTEERLYTGRRGRGAFCNGQRLRVSGETDLSKALV 170
H + + + + C ++ + R G S +
Sbjct: 194 HGADVLCLDLAPSETGNTFVS--GGCDKKAMVWDMR-SGQCVQAFETHESDVNSVRYYPS 250
Query: 171 LTEIGPKRDPATLKLFLSNMERLLHAKAHGVRVIGSSTLALCHLASGAADAYYQFGLHCW 230
D AT +L+ +R + + + G+S++ Y + ++ W
Sbjct: 251 GDAFASGSDDATCRLYDLRADREVAIYSKESIIFGASSVDFSLSGRLLFAGYNDYTINVW 310
Query: 231 DLAAA 235
D+
Sbjct: 311 DVLKG 315
>4JG5-A nrPDB
Length = 355
Score = 29.7 bits (65), Expect = 1.7, Method: Composition-based stats.
Identities = 34/189 (17%), Positives = 55/189 (29%), Gaps = 19/189 (10%)
Query: 4 SGEDQAALAAGPWEECFQAAVQLALRAGQIIRKALTEEKRVSTKTSAADLVTETDHLVED 63
SG + +A+ A A+RA I+ + + + T D +
Sbjct: 67 SGAEHSAIIAD-------VPTTKAVRARIIVLANVPRDLLSTVSTYDEFQTRLVDLSSQS 119
Query: 64 LIISELR-ERFPSHRFIAEEAAASGAKCVLTHSPTWIIDPIDGTCNFVHRFPTVAVSIGF 122
+ + + ++EE G + + I DPI T R V +S F
Sbjct: 120 QTNLTMSSQVIVTKSALSEEDNYLGYTDLGDQNVDGISDPILLTR-VAARIDLVNISTRF 178
Query: 123 AVRQELEFGV--------IYHCTEERLYTGRRGRGAFCNGQRLRVSGETDLSKALVLTEI 174
A G IY+ + Y G +R S +T LV
Sbjct: 179 A--GTPFAGREVRIDAVGIYNMKTKSYYFSEADWGETEAPDAVRNSEDTSFEDLLVNDGT 236
Query: 175 GPKRDPATL 183
P
Sbjct: 237 SISNTPFVH 245
>3CMG-A nrPDB
Length = 667
Score = 29.3 bits (64), Expect = 2.2, Method: Composition-based stats.
Identities = 11/42 (26%), Positives = 14/42 (33%), Gaps = 1/42 (2%)
Query: 116 VAVSIGFAVRQELEFGVIYHCTEERLYTGRRGRGAFCNGQRL 157
VSI + V R Y +G F NG+ L
Sbjct: 243 YQVSISLHKDGKQIDSVT-QPLGLRYYHTDPDKGFFLNGKHL 283
>6HHQ-h nrPDB
Length = 319
Score = 28.9 bits (63), Expect = 2.4, Method: Composition-based stats.
Identities = 17/94 (18%), Positives = 29/94 (30%), Gaps = 3/94 (3%)
Query: 174 IGPKRDPATLKLFLSNMERLLHAKAHGVRVIGSSTLALCHLASGA--ADAYYQFGLHCWD 231
+ RD + L+ ++ + A GA A + L WD
Sbjct: 34 LSASRDKTLISWKLTGDDQKFGVPVRSFKGHSHIVQDCTLTADGAYALSASWDKTLRLWD 93
Query: 232 LAAATVIIREAGGIVIDTSGGPLDLMACRVVAAS 265
+A R G D +D A +++ S
Sbjct: 94 VATGETYQRFVGHK-SDVMSVDIDKKASMIISGS 126
>4ZSG-A nrPDB
Length = 347
Score = 28.5 bits (62), Expect = 3.5, Method: Composition-based stats.
Identities = 9/46 (19%), Positives = 20/46 (43%), Gaps = 3/46 (6%)
Query: 35 RKALTEEKRVSTKTSAADLVTETDHLVEDLIISELRERFPSHRFIA 80
R+ ++ + +A D+VT + +L ++ + F IA
Sbjct: 28 RRLTGQQVAIKKIPNAFDVVTNAKRTLREL---KILKHFKHDNIIA 70
>4IC8-A nrPDB
Length = 442
Score = 28.5 bits (62), Expect = 3.5, Method: Composition-based stats.
Identities = 9/46 (19%), Positives = 20/46 (43%), Gaps = 3/46 (6%)
Query: 35 RKALTEEKRVSTKTSAADLVTETDHLVEDLIISELRERFPSHRFIA 80
R+ ++ + +A D+VT + +L ++ + F IA
Sbjct: 76 RRLTGQQVAIKKIPNAFDVVTNAKRTLREL---KILKHFKHDNIIA 118
>5EUA-A nrPDB
Length = 265
Score = 28.5 bits (62), Expect = 3.6, Method: Composition-based stats.
Identities = 14/56 (25%), Positives = 21/56 (37%)
Query: 189 NMERLLHAKAHGVRVIGSSTLALCHLASGAADAYYQFGLHCWDLAAATVIIREAGG 244
N ER LH + + + Q L D AAA ++++E GG
Sbjct: 64 NPERKLHYDSAFLEEYAPAAKRYVATGYMTVTEAIQSALQLSDNAAANLLLKEVGG 119
>4MKS-A nrPDB
Length = 440
Score = 28.2 bits (61), Expect = 4.1, Method: Composition-based stats.
Identities = 22/133 (16%), Positives = 36/133 (27%), Gaps = 31/133 (23%)
Query: 14 GPWEECFQAAVQLALRAGQIIRKALTEEKRVSTKTSAADLVTETDHLVEDLIISELRERF 73
P+E +A + + GQ I A VT D
Sbjct: 217 EPFEILVEAIQRAGYKPGQDIAIAFDCAASEFYNKDTKKYVTVAD--------------- 261
Query: 74 PSHRFIAEEAAASGAKCVLTHSPTWIIDPID-----GTCNFVHRF---------PTVAVS 119
+ AEE + V + + DP+D G F R +
Sbjct: 262 -GREYTAEEWTSLIEDLVDKYPVISVEDPLDENDWEGWKTFTERLGDKVQIVGDDLFVTN 320
Query: 120 IGFAVRQELEFGV 132
+ + ++ GV
Sbjct: 321 TSYLEKG-IKMGV 332
>5OQL-J nrPDB
Length = 912
Score = 28.2 bits (61), Expect = 4.3, Method: Composition-based stats.
Identities = 26/165 (15%), Positives = 43/165 (26%), Gaps = 33/165 (20%)
Query: 85 ASGAKCVLTHSPTWIIDPIDGTCNFVHRFPTVAVSIGFAVRQELEFGVIYHC-TEERLYT 143
A+ T +I PI + S+ + + L T
Sbjct: 2 ATKQPAKTTFEVANVIQPI-----YTGG------SVALENGARILASTLGENAILTELNT 50
Query: 144 GRRGRGAFCNGQRLRVSGETDLSKALVLTEIG-----------PKRDPATLKLFLSNMER 192
G+R +G+ + T L++ P D L +
Sbjct: 51 GKRLAEIQGDGEPISTLTITPSGSHLIVCSRSLTMRIYSLAISPDYDSVEPTLVRTTKPH 110
Query: 193 LLHAKAHGVRVIGSSTLALCHLASGAADAYYQFGLHCWDLAAATV 237
V + LA+GAAD + WD+ V
Sbjct: 111 ATPVVVLAVDRTST------LLATGAADG----AIKIWDIIGGYV 145
>3FN9-A nrPDB
Length = 692
Score = 28.2 bits (61), Expect = 4.3, Method: Composition-based stats.
Identities = 9/41 (21%), Positives = 15/41 (36%), Gaps = 1/41 (2%)
Query: 116 VAVSIGFAVRQELEFGVIYHCTEERLYTGRRGRGAFCNGQR 156
V ++ V+ R Y G+G F NG++
Sbjct: 257 YKVVCRLMADGKVIDEVV-QPLGVRKYEIVAGKGFFLNGEK 296
>4LJ8-A nrPDB
Length = 339
Score = 27.8 bits (60), Expect = 5.1, Method: Composition-based stats.
Identities = 7/41 (17%), Positives = 16/41 (39%)
Query: 244 GIVIDTSGGPLDLMACRVVAASTREMAMLIAQALQTINYGR 284
G + D+ G +D ++ S +++ + Y R
Sbjct: 172 GRLTDSHGRTVDFRNTVIILTSNLGSPLILEGLQKGWPYER 212
>3BRN-A nrPDB
Length = 157
Score = 27.8 bits (60), Expect = 5.1, Method: Composition-based stats.
Identities = 12/66 (18%), Positives = 22/66 (33%)
Query: 153 NGQRLRVSGETDLSKALVLTEIGPKRDPATLKLFLSNMERLLHAKAHGVRVIGSSTLALC 212
NG ++ V+G R ++ N E +H+ A ++ G
Sbjct: 78 NGDKIEVTGAGQDLSGTTTVLFSDYRSCDVMRGPDGNYELWVHSSAINLQSYGCCDTKFA 137
Query: 213 HLASGA 218
+A G
Sbjct: 138 QVAGGR 143
>1QVR-A nrPDB
Length = 854
Score = 27.8 bits (60), Expect = 6.2, Method: Composition-based stats.
Identities = 7/41 (17%), Positives = 16/41 (39%)
Query: 244 GIVIDTSGGPLDLMACRVVAASTREMAMLIAQALQTINYGR 284
G + D+ G +D ++ S +++ + Y R
Sbjct: 687 GRLTDSHGRTVDFRNTVIILTSNLGSPLILEGLQKGWPYER 727
Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta
Posted date: Jan 3, 2023 9:05 PM
Number of letters in database: 10,336,785
Number of sequences in database: 36,641
Lambda K H
0.310 0.130 0.346
Lambda K H
0.267 0.0398 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,779,773
Number of Sequences: 36641
Number of extensions: 348497
Number of successful extensions: 1163
Number of sequences better than 10.0: 51
Number of HSP's better than 10.0 without gapping: 62
Number of HSP's successfully gapped in prelim test: 19
Number of HSP's that attempted gapping in prelim test: 985
Number of HSP's gapped (non-prelim): 91
length of query: 288
length of database: 10,336,785
effective HSP length: 96
effective length of query: 192
effective length of database: 6,819,249
effective search space: 1309295808
effective search space used: 1309295808
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.3 bits)
S2: 58 (27.0 bits)