BLASTP 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Reference for composition-based statistics starting in round 2:
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,
Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005.
Query= O14656
(332 letters)
Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta
36,641 sequences; 10,336,785 total letters
Searching..................................................done
Results from round 1
Score E
Sequences producing significant alignments: (bits) Value
5J1S-A nrPDB 585 e-167
6EMW-B nrPDB 42 4e-04
6EM8-A nrPDB 42 4e-04
3J3U-A nrPDB 37 0.009
5VY8-A nrPDB 37 0.016
4LJ8-A nrPDB 36 0.027
1QVR-A nrPDB 36 0.028
4CIU-A nrPDB 35 0.032
3PXI-A nrPDB 35 0.032
6ED3-A nrPDB 35 0.060
6E11-1 nrPDB 33 0.14
5OFO-C nrPDB 33 0.15
5Z3Q-B nrPDB 32 0.39
3TQC-A nrPDB 32 0.44
3KBJ-A nrPDB 32 0.49
1DXI-A nrPDB 32 0.56
4HHL-A nrPDB 31 0.58
4N3O-A nrPDB 31 0.92
4W5W-A nrPDB 29 2.2
4I5O-A nrPDB 29 2.5
6A1Z-A nrPDB 29 2.9
3GBJ-A nrPDB 29 3.0
5FM7-A nrPDB 29 3.1
3ZW6-A nrPDB 29 3.5
3RTY-A nrPDB 29 3.6
2Z0M-A nrPDB 28 4.4
2QBY-A nrPDB 28 6.1
5UJ8-A nrPDB 28 6.2
1UM8-A nrPDB 28 6.6
6D00-1 nrPDB 28 7.5
5OCB-A nrPDB 27 8.9
6BOG-A nrPDB 27 9.0
>5J1S-A nrPDB
Length = 284
Score = 585 bits (1507), Expect = e-167, Method: Compositional matrix adjust.
Identities = 281/282 (99%), Positives = 282/282 (100%)
Query: 51 GQKRSLSREALQKDLDDNLFGQHLAKKIILNAVFGFINNPKPKKPLTLSLHGWTGTGKNF 110
GQKRSLSREALQKDLDDNLFGQHLAKKIILNAVFGFINNPKPKKPLTLSLHGWTGTGKNF
Sbjct: 3 GQKRSLSREALQKDLDDNLFGQHLAKKIILNAVFGFINNPKPKKPLTLSLHGWTGTGKNF 62
Query: 111 VSKIIAENIYEGGLNSDYVHLFVATLHFPHASNITLYKDQLQLWIRGNVSACARSIFIFD 170
VSKIIAENIYEGGLNSDYVHLFVATLHFPHASNITLYKDQLQLWIRGNVSACARSIFIFD
Sbjct: 63 VSKIIAENIYEGGLNSDYVHLFVATLHFPHASNITLYKDQLQLWIRGNVSACARSIFIFD 122
Query: 171 EMDKMHAGLIDAIKPFLDYYDLVDGVSYQKAMFIFLSNAGAERITDVALDFWRSGKQRED 230
+MDKMHAGLIDAIKPFLDYYDLVDGVSYQKAMFIFLSNAGAERITDVALDFWRSGKQRED
Sbjct: 123 QMDKMHAGLIDAIKPFLDYYDLVDGVSYQKAMFIFLSNAGAERITDVALDFWRSGKQRED 182
Query: 231 IKLKDIEHALSVSVFNNKNSGFWHSSLIDRNLIDYFVPFLPLEYKHLKMCIRVEMQSRGY 290
IKLKDIEHALSVSVFNNKNSGFWHSSLIDRNLIDYFVPFLPLEYKHLKMCIRVEMQSRGY
Sbjct: 183 IKLKDIEHALSVSVFNNKNSGFWHSSLIDRNLIDYFVPFLPLEYKHLKMCIRVEMQSRGY 242
Query: 291 EIDEDIVSRVAEEMTFFPKEERVFSDKGCKTVFTKLDYYYDD 332
EIDEDIVSRVAEEMTFFPKEERVFSDKGCKTVFTKLDYYYDD
Sbjct: 243 EIDEDIVSRVAEEMTFFPKEERVFSDKGCKTVFTKLDYYYDD 284
>6EMW-B nrPDB
Length = 225
Score = 42.0 bits (97), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 39/170 (22%), Positives = 79/170 (46%), Gaps = 22/170 (12%)
Query: 65 LDDNLFGQHLAKKIILNAVFGFINNPK-----PKKPL-TLSLHGWTGTGKNFVSKIIAEN 118
L+D L + + +K +N++ + + PK+P+ + G TG GK +++ +AE+
Sbjct: 15 LEDTLHERVIGQKDAVNSISKAVRRARAGLKDPKRPIGSFIFLGPTGVGKTELARALAES 74
Query: 119 IYEGGLNSDYVHLFVATLHFPHASNITL--------YKDQLQLWIRGNVSACARSIFIFD 170
++ G + + + ++ HA + + + D QL + V S+ +FD
Sbjct: 75 MF--GDDDAMIRVDMSEFMEKHAVSRLVGAPPGYVGHDDGGQLTEK--VRRKPYSVILFD 130
Query: 171 EMDKMHAGLIDAIKPFLDYYDLVD----GVSYQKAMFIFLSNAGAERITD 216
E++K H + + + LD L D V ++ + I SN GA+ + D
Sbjct: 131 EIEKAHPDVFNILLQVLDDGHLTDTKGRTVDFRNTIIIMTSNVGAQELQD 180
>6EM8-A nrPDB
Length = 818
Score = 42.0 bits (97), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 39/170 (22%), Positives = 79/170 (46%), Gaps = 22/170 (12%)
Query: 65 LDDNLFGQHLAKKIILNAVFGFINNPK-----PKKPL-TLSLHGWTGTGKNFVSKIIAEN 118
L+D L + + +K +N++ + + PK+P+ + G TG GK +++ +AE+
Sbjct: 502 LEDTLHERVIGQKDAVNSISKAVRRARAGLKDPKRPIGSFIFLGPTGVGKTELARALAES 561
Query: 119 IYEGGLNSDYVHLFVATLHFPHASNITL--------YKDQLQLWIRGNVSACARSIFIFD 170
++ G + + + ++ HA + + + D QL + V S+ +FD
Sbjct: 562 MF--GDDDAMIRVDMSEFMEKHAVSRLVGAPPGYVGHDDGGQLTEK--VRRKPYSVILFD 617
Query: 171 EMDKMHAGLIDAIKPFLDYYDLVD----GVSYQKAMFIFLSNAGAERITD 216
E++K H + + + LD L D V ++ + I SN GA+ + D
Sbjct: 618 EIEKAHPDVFNILLQVLDDGHLTDTKGRTVDFRNTIIIMTSNVGAQELQD 667
>3J3U-A nrPDB
Length = 810
Score = 37.4 bits (85), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 52/237 (21%), Positives = 97/237 (40%), Gaps = 41/237 (17%)
Query: 92 PKKPL-TLSLHGWTGTGKNFVSKIIAENIYEGGLNSDYVHLFVATLHFPHASNITL---- 146
PK+P+ + G TG GK +++ +AE+I+ G + + ++ H+++ +
Sbjct: 534 PKRPIGSFIFLGPTGVGKTELARALAESIF--GDEESMIRIDMSEYMEKHSTSRLVGSPP 591
Query: 147 ----YKDQLQLWIRGNVSACARSIFIFDEMDKMHAGLIDAIKPFLDYYDLVDG----VSY 198
Y + QL + V S+ + D ++K H + + + L+ L D V +
Sbjct: 592 GYVGYDEGGQLTEK--VRRKPYSVVLLDAIEKAHPDVFNILLQVLEDGRLTDSKGRTVDF 649
Query: 199 QKAMFIFLSNAGAERITD---VALDFWRSGKQREDIKLKDIEHALSVSVFNNKNSGFWHS 255
+ + I SN GA + V + + +D+K K V F
Sbjct: 650 RNTILIMTSNVGASELKRNKYVGFNVQDETQNHKDMKDK---------VMGELKRAFRPE 700
Query: 256 SLIDRNLIDYFVPFLPLEYKHL---------KMCIRVEMQSRGYEIDEDIVSRVAEE 303
+ N ID + F LE KHL ++ R++ Q E+ + ++VAEE
Sbjct: 701 FI---NRIDEIIVFHSLEKKHLTEIVSLMSDQLTKRLKEQDLSIELTDAAKAKVAEE 754
>5VY8-A nrPDB
Length = 908
Score = 36.6 bits (83), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 41/172 (23%), Positives = 69/172 (40%), Gaps = 31/172 (18%)
Query: 61 LQKDLDDNLFGQHLAKKIILNAV----FGFINNPKPKKPLTLSLHGWTGTGKNFVSKIIA 116
+++DL + GQ A K + NAV G N P++P + G +G+GK ++K +A
Sbjct: 572 MERDLSSEVVGQMDAIKAVSNAVRLSRSGLAN---PRQPASFLFLGLSGSGKTELAKKVA 628
Query: 117 ENIYE----------GGLNSDYV--HLFVATLHFPHASNITLYKDQLQLWIRGNVSACAR 164
++ L+ Y L T + +QLQ
Sbjct: 629 GFLFNDEDMMIRVDCSELSEKYAVSKLLGTTAGYVGYDEGGFLTNQLQYK--------PY 680
Query: 165 SIFIFDEMDKMHAGLIDAIKPFLDYYDLVDG----VSYQKAMFIFLSNAGAE 212
S+ +FDE++K H ++ + LD + G + + I SN GAE
Sbjct: 681 SVLLFDEVEKAHPDVLTVMLQMLDDGRITSGQGKTIDCSNCIVIMTSNLGAE 732
>4LJ8-A nrPDB
Length = 339
Score = 35.8 bits (81), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 57/271 (21%), Positives = 108/271 (39%), Gaps = 41/271 (15%)
Query: 68 NLFGQHLAKKIILNAVFGFINNPK-PKKPL-TLSLHGWTGTGKNFVSKIIAENIY---EG 122
+ GQ A + + +A+ K P +P+ + G TG GK ++K +A ++ E
Sbjct: 44 RVVGQDEAIRAVADAIRRARAGLKDPNRPIGSFLFLGPTGVGKTELAKTLAATLFDTEEA 103
Query: 123 GLN---SDYVHLFVATLHFPHASNITLYKDQLQLWIRGNVSACAR---SIFIFDEMDKMH 176
+ ++Y+ + Y++ QL A R S+ +FDE++K H
Sbjct: 104 MIQIDMTEYMEKHAVSRLIGAPPGYVGYEEGGQL-----TEAVRRRPYSVILFDEIEKAH 158
Query: 177 AGLIDAIKPFLDYYDLVDG----VSYQKAMFIFLSNAGAERITDVALDFWRSGKQREDIK 232
+ + + LD L D V ++ + I SN G+ I + W + R++
Sbjct: 159 PDVFNILLQILDDGRLTDSHGRTVDFRNTVIILTSNLGSPLILEGLQKGWPYERIRDE-- 216
Query: 233 LKDIEHALSVSVFNNKNSGFWHSSLIDRNLIDYFVPFLPLEYKHLKMCIRVEMQSRGYEI 292
VF F L N +D V F PL + ++ + +++ +
Sbjct: 217 -----------VFKVLQQHFRPEFL---NRLDEIVVFRPLTKEQIRQIVEIQLSYLRARL 262
Query: 293 DEDIVSRVAEEMTFFPKEERVFSDKGCKTVF 323
E R++ E+T K+ +++G VF
Sbjct: 263 AE---KRISLELTEAAKD--FLAERGYDPVF 288
>1QVR-A nrPDB
Length = 854
Score = 35.8 bits (81), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 56/271 (20%), Positives = 107/271 (39%), Gaps = 41/271 (15%)
Query: 68 NLFGQHLAKKIILNAVFGFINNPK-PKKPL-TLSLHGWTGTGKNFVSKIIAENIYEGGLN 125
+ GQ A + + +A+ K P +P+ + G TG GK ++K +A +++
Sbjct: 559 RVVGQDEAIRAVADAIRRARAGLKDPNRPIGSFLFLGPTGVGKTELAKTLAATLFDTEEA 618
Query: 126 ------SDYVHLFVATLHFPHASNITLYKDQLQLWIRGNVSACAR---SIFIFDEMDKMH 176
++Y+ + Y++ QL A R S+ +FDE++K H
Sbjct: 619 MIRIDMTEYMEKHAVSRLIGAPPGYVGYEEGGQL-----TEAVRRRPYSVILFDEIEKAH 673
Query: 177 AGLIDAIKPFLDYYDLVDG----VSYQKAMFIFLSNAGAERITDVALDFWRSGKQREDIK 232
+ + + LD L D V ++ + I SN G+ I + W + R++
Sbjct: 674 PDVFNILLQILDDGRLTDSHGRTVDFRNTVIILTSNLGSPLILEGLQKGWPYERIRDE-- 731
Query: 233 LKDIEHALSVSVFNNKNSGFWHSSLIDRNLIDYFVPFLPLEYKHLKMCIRVEMQSRGYEI 292
VF F L N +D V F PL + ++ + +++ +
Sbjct: 732 -----------VFKVLQQHFRPEFL---NRLDEIVVFRPLTKEQIRQIVEIQLSYLRARL 777
Query: 293 DEDIVSRVAEEMTFFPKEERVFSDKGCKTVF 323
E R++ E+T K+ +++G VF
Sbjct: 778 AE---KRISLELTEAAKD--FLAERGYDPVF 803
>4CIU-A nrPDB
Length = 727
Score = 35.4 bits (80), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 52/256 (20%), Positives = 106/256 (41%), Gaps = 48/256 (18%)
Query: 61 LQKDLDDNLFGQHLAKKIILNAV----FGFINNPKPKKPL-TLSLHGWTGTGKNFVSKII 115
++++L + GQ+ A + NA+ G + P +P+ + G TG GK + K +
Sbjct: 420 MEQELHHRVIGQNEAVDAVSNAIRRSRAGLAD---PNRPIGSFLFLGPTGVGKTELCKAL 476
Query: 116 AENIYEGGLNSDYVHLFVATLHFPHASNITLYKDQLQLWIR----GNVSACAR----SIF 167
A ++ +SD + + F +++ ++ G ++ R S+
Sbjct: 477 ANFMF----DSDEAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVI 532
Query: 168 IFDEMDKMHAGLIDAIKPFLDYYDLVDG----VSYQKAMFIFLSNAGAERITDVALDFWR 223
+ D ++K H + + + LD L DG V ++ + I SN G++ I +
Sbjct: 533 LLDAVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQE------- 585
Query: 224 SGKQREDIKLKDIEHALSVSVFNNKNSGFWHSSLIDRNLIDYFVPFLPLEYKHLKMCIRV 283
+ ++++A + S + I+R ID V F PL +H+ ++
Sbjct: 586 --------RFGELDYAHMKELVLGVVSHNFRPEFINR--IDEVVVFHPLGEQHIASIAQI 635
Query: 284 E-------MQSRGYEI 292
+ ++ RGYEI
Sbjct: 636 QLKRLYKRLEERGYEI 651
>3PXI-A nrPDB
Length = 758
Score = 35.4 bits (80), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 48/226 (21%), Positives = 89/226 (39%), Gaps = 54/226 (23%)
Query: 92 PKKPL-TLSLHGWTGTGKNFVSKIIAENIYEGGLNSDYVHLFVATLHFPHASNITLYKDQ 150
PK+P+ + G TG GK +++ +AE+I+ G + + ++ H+++ Q
Sbjct: 517 PKRPIGSFIFLGPTGVGKTELARALAESIF--GDEESMIRIDMSEYMEKHSTS----GGQ 570
Query: 151 LQLWIRGNVSACARSIFIFDEMDKMHAGLIDAIKPFLDYYDLVDG----VSYQKAMFIFL 206
L +R S+ + D ++K H + + + L+ L D V ++ + I
Sbjct: 571 LTEKVRRK----PYSVVLLDAIEKAHPDVFNILLQVLEDGRLTDSKGRTVDFRNTILIMT 626
Query: 207 SNAGAERITDVALDFWRSGKQREDIKLKDIEHALSVSVFNNKNSGFWHSSLIDRNLIDYF 266
SN GA V + R+ + I+R ID
Sbjct: 627 SNVGASEKDKVMGELKRA----------------------------FRPEFINR--IDEI 656
Query: 267 VPFLPLEYKHL---------KMCIRVEMQSRGYEIDEDIVSRVAEE 303
+ F LE KHL ++ R++ Q E+ + ++VAEE
Sbjct: 657 IVFHSLEKKHLTEIVSLMSDQLTKRLKEQDLSIELTDAAKAKVAEE 702
>6ED3-A nrPDB
Length = 848
Score = 34.7 bits (78), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 36/163 (22%), Positives = 69/163 (42%), Gaps = 18/163 (11%)
Query: 65 LDDNLFGQHLAKKIILNAVFGFINNPK-----PKKPL-TLSLHGWTGTGKNFVSKIIAEN 118
++D L + + +K + AV + + P +P G TG GK ++K +A+
Sbjct: 564 MEDELGKRVIGQKAAVTAVSDAVRRSRAGVSDPNRPTGAFMFLGPTGVGKTELAKALADF 623
Query: 119 IYEGGLNSDYVHLFVATLHFPH--ASNITLYKDQLQLWIRGNVSACAR----SIFIFDEM 172
+++ V + ++ H A I + G ++ R ++ +FDE+
Sbjct: 624 LFDD--ERAMVRIDMSEYGEKHTVARLIGAPPGYVGYEAGGQLTEAVRRRPYTVVLFDEI 681
Query: 173 DKMHAGLIDAIKPFLDYYDLVDG----VSYQKAMFIFLSNAGA 211
+K H + D + LD L DG V ++ + I SN G+
Sbjct: 682 EKAHPDVFDVLLQVLDEGRLTDGHGRTVDFRNTILILTSNLGS 724
>6E11-1 nrPDB
Length = 906
Score = 33.5 bits (75), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 34/134 (25%), Positives = 59/134 (44%), Gaps = 17/134 (12%)
Query: 92 PKKPL-TLSLHGWTGTGKNFVSKIIAENIYEGGLNSDYVHLFVATLHFPHASNITLYKDQ 150
P+KP+ T G TG GK ++K +A ++ NS + V F A +++
Sbjct: 627 PEKPIGTFLFLGPTGVGKTELAKTLAIELF----NSKDNLIRVNMSEFTEAHSVSKITGS 682
Query: 151 LQLWI----RGNVSACAR----SIFIFDEMDKMHAGLIDAIKPFL-DYY---DLVDGVSY 198
++ G ++ R S+ +FDE++K HA + + L D Y + + +
Sbjct: 683 PPGYVGFSDSGQLTEAVREKPHSVVLFDELEKAHADVFKVLLQILGDGYINDNHRRNIDF 742
Query: 199 QKAMFIFLSNAGAE 212
+ I SN GAE
Sbjct: 743 SNTIIIMTSNLGAE 756
>5OFO-C nrPDB
Length = 871
Score = 33.5 bits (75), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 54/256 (21%), Positives = 101/256 (39%), Gaps = 48/256 (18%)
Query: 61 LQKDLDDNLFGQHLAKKIILNAV----FGFINNPKPKKPL-TLSLHGWTGTGKNFVSKII 115
++++L + GQ+ A + NA+ G + P +P+ + G TG GK + K +
Sbjct: 566 MEQELHHRVIGQNEAVDAVSNAIRRSRAGLAD---PNRPIGSFLFLGPTGVGKTELCKAL 622
Query: 116 AENIYEGGLNSDYVHLFVATLHFPHASNITLYKDQLQLWIR----GNVSACAR----SIF 167
A ++ +SD + + F +++ ++ G ++ R S+
Sbjct: 623 ANFMF----DSDEAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVI 678
Query: 168 IFDEMDKMHAGLIDAIKPFLDYYDLVDG----VSYQKAMFIFLSNAGAERITDVALDFWR 223
+ D ++K H + + + LD L DG V ++ + I SN G
Sbjct: 679 LLDAVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGVRET--------- 729
Query: 224 SGKQREDIKLKDIEHALSVSVFNNKNSGFWHSSLIDRNLIDYFVPFLPLEYKHLKMCIRV 283
+R+ I L I S + I+R ID V F PL +H+ ++
Sbjct: 730 ---ERKSIGL--IHQDNSTDAMEEIKK-IFRPEFINR--IDEVVVFHPLGEQHIASIAQI 781
Query: 284 E-------MQSRGYEI 292
+ ++ RGYEI
Sbjct: 782 QLKRLYKRLEERGYEI 797
>5Z3Q-B nrPDB
Length = 214
Score = 32.0 bits (71), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 14/35 (40%), Positives = 20/35 (57%)
Query: 94 KPLTLSLHGWTGTGKNFVSKIIAENIYEGGLNSDY 128
+P+ L +HG GTGK+ + +IA I E S Y
Sbjct: 6 EPVCLLVHGSPGTGKSVATNLIARAIAEAENTSTY 40
>3TQC-A nrPDB
Length = 321
Score = 31.6 bits (70), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 11/41 (26%), Positives = 23/41 (56%)
Query: 75 AKKIILNAVFGFINNPKPKKPLTLSLHGWTGTGKNFVSKII 115
A++ + A + F+ P+PK P + + G GK+ S+++
Sbjct: 72 ARQTLQQATYQFLGKPEPKVPYIIGIAGSVAVGKSTTSRVL 112
>3KBJ-A nrPDB
Length = 388
Score = 31.6 bits (70), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 30/66 (45%), Gaps = 2/66 (3%)
Query: 86 FINNPKPKKPLTLSLHGWTGTGKNFVSKIIAENIYEGGLNSDYVHLFVATLHFPHASNIT 145
F PKP +P L G F+ ++ +Y G+N + H +A L+FPH
Sbjct: 178 FAIEPKPNEPRGDILLPTVGHALAFIERLERPELY--GVNPEVGHEQMAGLNFPHGIAQA 235
Query: 146 LYKDQL 151
L+ +L
Sbjct: 236 LWAGKL 241
>1DXI-A nrPDB
Length = 388
Score = 31.6 bits (70), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 30/66 (45%), Gaps = 2/66 (3%)
Query: 86 FINNPKPKKPLTLSLHGWTGTGKNFVSKIIAENIYEGGLNSDYVHLFVATLHFPHASNIT 145
F PKP +P L G F+ ++ +Y G+N + H +A L+FPH
Sbjct: 178 FAIEPKPNEPRGDILLPTVGHALAFIERLERPELY--GVNPEVGHEQMAGLNFPHGIAQA 235
Query: 146 LYKDQL 151
L+ +L
Sbjct: 236 LWAGKL 241
>4HHL-A nrPDB
Length = 388
Score = 31.2 bits (69), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 30/66 (45%), Gaps = 2/66 (3%)
Query: 86 FINNPKPKKPLTLSLHGWTGTGKNFVSKIIAENIYEGGLNSDYVHLFVATLHFPHASNIT 145
F PKP +P L G F+ ++ +Y G+N + H +A L+FPH
Sbjct: 178 FAIEPKPNEPRGDILLPTIGHALAFIERLERPELY--GVNPEVGHEQMAGLNFPHGIAQA 235
Query: 146 LYKDQL 151
L+ +L
Sbjct: 236 LWAGKL 241
>4N3O-A nrPDB
Length = 342
Score = 30.8 bits (68), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 26/107 (24%), Positives = 43/107 (40%), Gaps = 17/107 (15%)
Query: 14 APSVVQAVEPISLGLALAGV--------LTGYIYPRLYCLFAECCGQKRSLSREALQKDL 65
A ++ P+ LGLA G TGY+ L+ C KR +
Sbjct: 3 AMKTIRTQTPLRLGLAGGGTDINLYCDKYTGYVLNATISLYIHCTLIKREDGKIIFDSP- 61
Query: 66 DDNLFGQHLAKKI--------ILNAVFGFINNPKPKKPLTLSLHGWT 104
D N + ++ +K+ I +++ I KKPL+ SLH ++
Sbjct: 62 DTNSYCEYESKEFLGNDGKLDIFKSIYNRIVKDFTKKPLSFSLHTYS 108
>4W5W-A nrPDB
Length = 391
Score = 29.3 bits (64), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 18/64 (28%), Positives = 35/64 (54%), Gaps = 4/64 (6%)
Query: 56 LSREALQKDLDDNLFGQHLAK----KIILNAVFGFINNPKPKKPLTLSLHGWTGTGKNFV 111
+S+ Q +LD+ + G ++A K++++ F+ P K PL L + G G GK+F
Sbjct: 58 VSQGLRQYNLDNMMDGFYIAPAFMDKLVVHITKNFLTLPNIKVPLILGIWGGKGQGKSFQ 117
Query: 112 SKII 115
+++
Sbjct: 118 CELV 121
>4I5O-A nrPDB
Length = 363
Score = 29.3 bits (64), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 32/119 (26%), Positives = 49/119 (41%), Gaps = 11/119 (9%)
Query: 65 LDDNLFGQHLAKKIILNAVF--------GFINNPKPKKPLTLSLHGWTGTGKNFVSKIIA 116
LDD + GQ AKK++ AV+ G +N + L G TG+GK +++ +A
Sbjct: 13 LDDYVIGQEQAKKVLAVAVYNHYKRLRNGDTSNGVELGKSNILLIGPTGSGKTLLAETLA 72
Query: 117 ENIYEGGLNSDYVHLFVATLHFPHASNITLYKDQLQLWIRGNVSACARSIFIFDEMDKM 175
+ +D L A NI +L +V R I DE+DK+
Sbjct: 73 RLLDVPFTMADATTLTEAGYVGEDVENII---QKLLQKCDYDVQKAQRGIVYIDEIDKI 128
>6A1Z-A nrPDB
Length = 395
Score = 28.9 bits (63), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 34/73 (46%), Gaps = 3/73 (4%)
Query: 144 ITLYKDQLQLWIRGNVSACARSIFIFDEMDKMHAGLIDAIKPFLDYYDLVDGVSYQKAMF 203
+T YKD L GN S + + +E + HA + L YD+ G S +K
Sbjct: 191 VTSYKDIESLMSEGNKSRTVAATNMNEESSRSHAVFKITLTHTL--YDVKSGTSGEKVGK 248
Query: 204 IFLSN-AGAERIT 215
+ L + AG+ER T
Sbjct: 249 LSLVDLAGSERAT 261
>3GBJ-A nrPDB
Length = 354
Score = 28.9 bits (63), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 34/73 (46%), Gaps = 3/73 (4%)
Query: 144 ITLYKDQLQLWIRGNVSACARSIFIFDEMDKMHAGLIDAIKPFLDYYDLVDGVSYQKAMF 203
+T YKD L GN S + + +E + HA + L YD+ G S +K
Sbjct: 188 VTSYKDIESLMSEGNKSRTVAATNMNEESSRSHAVFKITLTHTL--YDVKSGTSGEKVGK 245
Query: 204 IFLSN-AGAERIT 215
+ L + AG+ER T
Sbjct: 246 LSLVDLAGSERAT 258
>5FM7-A nrPDB
Length = 464
Score = 28.9 bits (63), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 11/37 (29%), Positives = 20/37 (54%)
Query: 266 FVPFLPLEYKHLKMCIRVEMQSRGYEIDEDIVSRVAE 302
+P P E ++ +R+ Q+ G ++ + V RVAE
Sbjct: 363 IIPTHPYEPDEIRRIVRIRAQTEGVQLTDAAVDRVAE 399
>3ZW6-A nrPDB
Length = 293
Score = 28.9 bits (63), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 17/56 (30%), Positives = 31/56 (55%), Gaps = 4/56 (7%)
Query: 64 DLDDNLFGQHLAK----KIILNAVFGFINNPKPKKPLTLSLHGWTGTGKNFVSKII 115
+LD+ L G ++A K++++ F+ P K PL L + G G GK+F +++
Sbjct: 1 NLDNKLDGFYIAPAFMDKLVVHITKNFLKLPNIKVPLILGIWGGKGQGKSFQCELV 56
>3RTY-A nrPDB
Length = 339
Score = 28.9 bits (63), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 16/55 (29%), Positives = 29/55 (52%)
Query: 278 KMCIRVEMQSRGYEIDEDIVSRVAEEMTFFPKEERVFSDKGCKTVFTKLDYYYDD 332
K+ I E QSR I EDIV R+AE ++ + + + C+ + + ++ D+
Sbjct: 277 KLKISEEAQSRNTRIKEDIVKRLAETVSRPSETVKQEVSRRCQALASFMETLMDE 331
>2Z0M-A nrPDB
Length = 337
Score = 28.5 bits (62), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 40/90 (44%), Gaps = 9/90 (10%)
Query: 151 LQLWIRGNVSACARSIFIFDEMDKM-HAGLIDAIKPFLDYYDLVDGVSYQKAMFIFLSNA 209
L LW +G + + I I DE D M G ID IK L S +K +F S
Sbjct: 117 LDLWSKGVIDLSSFEIVIIDEADLMFEMGFIDDIKIILAQ------TSNRKITGLF-SAT 169
Query: 210 GAERITDVALDFWRSGKQRED-IKLKDIEH 238
E I V DF + ++ E I L ++EH
Sbjct: 170 IPEEIRKVVKDFITNYEEIEACIGLANVEH 199
>2QBY-A nrPDB
Length = 386
Score = 28.1 bits (61), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 13/45 (28%), Positives = 26/45 (57%), Gaps = 1/45 (2%)
Query: 91 KPKKPLTLSLHGWTGTGKNFVSKIIAENIYEGGLNSDYVHLFVAT 135
+ +KP + ++G TGTGK V K + +++ L + H+++ T
Sbjct: 41 REEKPNNIFIYGLTGTGKTAVVKFVLSKLHKKFLGK-FKHVYINT 84
>5UJ8-A nrPDB
Length = 712
Score = 28.1 bits (61), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 20/75 (26%), Positives = 35/75 (46%), Gaps = 3/75 (4%)
Query: 197 SYQKAMFIFLSNAGAERITDVALDFWRSGK-QREDIKLKDIEHALSVSVFNNKNSGFWHS 255
S K F+F N+ +I+ D++ GK + ED KL+ + L ++N
Sbjct: 5 SMSKGCFVFKPNSKKRKISLPIEDYFNKGKNEPEDSKLRFETYQLIWQQMKSENERLQEE 64
Query: 256 SLIDRNLIDYFVPFL 270
+++NL D + FL
Sbjct: 65 --LNKNLFDNLIEFL 77
>1UM8-A nrPDB
Length = 376
Score = 27.7 bits (60), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 33/134 (24%), Positives = 50/134 (37%), Gaps = 26/134 (19%)
Query: 65 LDDNLFGQHLAKKIILNAVFGFINNPKPKKPL-----------------------TLSLH 101
LD+ + GQ AKK+ AV+ K+ L + L
Sbjct: 19 LDNYVIGQEQAKKVFSVAVYNHYKRLSFKEKLKKQDNQDSNVELEHLEEVELSKSNILLI 78
Query: 102 GWTGTGKNFVSKIIAENIYEGGLNSDYVHLFVATLHFPHASNITLYKDQLQLWIRGNVSA 161
G TG+GK +++ +A+++ SD L A NI Q W NV
Sbjct: 79 GPTGSGKTLMAQTLAKHLDIPIAISDATSLTEAGYVGEDVENILTRLLQASDW---NVQK 135
Query: 162 CARSIFIFDEMDKM 175
+ I DE+DK+
Sbjct: 136 AQKGIVFIDEIDKI 149
>6D00-1 nrPDB
Length = 883
Score = 27.7 bits (60), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 14/52 (26%), Positives = 26/52 (50%), Gaps = 4/52 (7%)
Query: 165 SIFIFDEMDKMHAGLIDAIKPFLDYYDLVDG----VSYQKAMFIFLSNAGAE 212
++ +FDEM+K H + + + LD D V ++ + + SN GA+
Sbjct: 674 TVVLFDEMEKAHKDVSNLLLQILDDGHCTDSKGRRVDFKNTIIVMTSNLGAD 725
>5OCB-A nrPDB
Length = 468
Score = 27.3 bits (59), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 13/33 (39%), Positives = 16/33 (48%)
Query: 84 FGFINNPKPKKPLTLSLHGWTGTGKNFVSKIIA 116
F N+P K P ++LHG TG G S A
Sbjct: 82 FHLKNHPSSKMPHNINLHGVTGPGGGAASSFTA 114
>6BOG-A nrPDB
Length = 968
Score = 27.3 bits (59), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 18/70 (25%), Positives = 30/70 (42%)
Query: 159 VSACARSIFIFDEMDKMHAGLIDAIKPFLDYYDLVDGVSYQKAMFIFLSNAGAERITDVA 218
+S A + I H L++ ++ F + L D Y +A + E++ +
Sbjct: 196 LSGAAERVLIIVPETLQHQWLVEMLRRFNLRFALFDDERYAEAQHDAYNPFDTEQLVICS 255
Query: 219 LDFWRSGKQR 228
LDF R KQR
Sbjct: 256 LDFARRSKQR 265
Searching..................................................done
Results from round 2
Score E
Sequences producing significant alignments: (bits) Value
Sequences used in model and found again:
5J1S-A nrPDB 529 e-151
6EM8-A nrPDB 199 2e-51
6EMW-B nrPDB 196 1e-50
Sequences not found previously or not previously below threshold:
4CIU-A nrPDB 152 3e-37
3J3U-A nrPDB 151 4e-37
5OFO-C nrPDB 150 7e-37
1QVR-A nrPDB 146 1e-35
4LJ8-A nrPDB 145 2e-35
6ED3-A nrPDB 140 1e-33
3PXI-A nrPDB 138 3e-33
6D00-1 nrPDB 120 7e-28
5D4W-A nrPDB 116 2e-26
6E11-1 nrPDB 113 9e-26
5VY8-A nrPDB 111 5e-25
1R6B-X nrPDB 100 9e-22
2CHG-A nrPDB 41 0.001
2CHV-A nrPDB 40 0.001
3M6A-A nrPDB 37 0.013
3H4M-A nrPDB 36 0.020
1SXJ-C nrPDB 36 0.022
1OFI-A nrPDB 35 0.043
3EC2-A nrPDB 35 0.047
4I5O-A nrPDB 35 0.051
3PVS-A nrPDB 34 0.096
1IM2-A nrPDB 34 0.11
5WVI-K nrPDB 33 0.13
1SXJ-D nrPDB 33 0.13
3WHK-A nrPDB 33 0.14
6EF1-K nrPDB 33 0.14
6EF2-J nrPDB 33 0.15
5EQT-A nrPDB 33 0.18
4D81-A nrPDB 33 0.19
6EF3-H nrPDB 33 0.20
6EF0-H nrPDB 33 0.20
3JCO-J nrPDB 33 0.20
1UM8-A nrPDB 33 0.23
6HE4-H nrPDB 32 0.32
5VHO-A nrPDB 32 0.34
5VFU-A nrPDB 32 0.35
5UBV-A nrPDB 32 0.36
6HE9-H nrPDB 32 0.37
3PFI-A nrPDB 32 0.38
4LCB-A nrPDB 32 0.38
5KWA-A nrPDB 32 0.46
5VHP-C nrPDB 31 0.54
5M32-h nrPDB 31 0.55
6EJ5-A nrPDB 31 0.57
2WJV-A nrPDB 31 0.57
5GJQ-J nrPDB 31 0.61
2X8A-A nrPDB 31 0.62
3HU1-A nrPDB 31 0.66
3CR8-A nrPDB 31 0.70
4YPL-A nrPDB 31 0.77
5C18-A nrPDB 31 0.77
5M7N-A nrPDB 31 0.80
5G4G-A nrPDB 31 0.84
5VC7-A nrPDB 31 0.87
4YPN-A nrPDB 30 1.1
1E94-E nrPDB 30 1.2
5W0T-A nrPDB 30 1.3
6EF0-L nrPDB 30 1.6
6MSK-B nrPDB 30 1.7
5WVI-L nrPDB 30 1.7
5VHO-B nrPDB 30 1.7
6FVU-L nrPDB 30 1.8
5L3S-B nrPDB 30 1.8
2CE7-A nrPDB 30 1.8
3UPU-A nrPDB 30 1.9
5VHF-B nrPDB 30 1.9
5VFP-B nrPDB 30 1.9
5VHN-D nrPDB 30 2.0
3K1J-A nrPDB 30 2.1
4OI0-A nrPDB 30 2.1
4N3O-A nrPDB 30 2.1
6MCK-A nrPDB 30 2.1
4ZPX-A nrPDB 30 2.1
5T0C-AD nrPDB 30 2.3
4NE4-A nrPDB 29 2.6
6EPC-H nrPDB 29 2.7
3TQC-A nrPDB 29 2.8
1IY1-A nrPDB 29 2.8
3RTY-A nrPDB 29 3.1
4XHZ-A nrPDB 29 3.1
4E22-A nrPDB 29 3.2
2DHR-A nrPDB 29 3.2
6AP1-A nrPDB 29 3.8
3EIH-A nrPDB 29 3.8
4UPB-C nrPDB 28 4.0
5XMK-A nrPDB 28 4.1
1SXJ-E nrPDB 28 4.2
3GEC-A nrPDB 28 4.4
6CHS-H nrPDB 28 4.6
5KJ4-A nrPDB 28 4.7
1XWI-A nrPDB 28 4.7
2Z0M-A nrPDB 28 4.9
3ZW6-A nrPDB 28 5.0
2ZAO-A nrPDB 28 5.0
5E7P-A nrPDB 28 5.1
6C13-A nrPDB 28 5.6
4LGM-A nrPDB 28 5.6
1LV7-A nrPDB 28 5.6
5VQ9-D nrPDB 28 5.6
3CF0-A nrPDB 28 5.9
5FM7-A nrPDB 28 5.9
2R65-A nrPDB 28 6.3
3A8T-A nrPDB 28 6.4
4DEF-A nrPDB 28 7.9
5E6U-A nrPDB 28 8.4
6MAT-A nrPDB 28 8.6
5WDE-A nrPDB 28 8.8
5Z3Q-B nrPDB 27 9.2
4IV8-A nrPDB 27 9.2
5VHP-E nrPDB 27 9.5
2QBY-B nrPDB 27 9.7
5BQ5-A nrPDB 27 9.9
6MSD-E nrPDB 27 10.0
>5J1S-A nrPDB
Length = 284
Score = 529 bits (1363), Expect = e-151, Method: Composition-based stats.
Identities = 281/282 (99%), Positives = 282/282 (100%)
Query: 51 GQKRSLSREALQKDLDDNLFGQHLAKKIILNAVFGFINNPKPKKPLTLSLHGWTGTGKNF 110
GQKRSLSREALQKDLDDNLFGQHLAKKIILNAVFGFINNPKPKKPLTLSLHGWTGTGKNF
Sbjct: 3 GQKRSLSREALQKDLDDNLFGQHLAKKIILNAVFGFINNPKPKKPLTLSLHGWTGTGKNF 62
Query: 111 VSKIIAENIYEGGLNSDYVHLFVATLHFPHASNITLYKDQLQLWIRGNVSACARSIFIFD 170
VSKIIAENIYEGGLNSDYVHLFVATLHFPHASNITLYKDQLQLWIRGNVSACARSIFIFD
Sbjct: 63 VSKIIAENIYEGGLNSDYVHLFVATLHFPHASNITLYKDQLQLWIRGNVSACARSIFIFD 122
Query: 171 EMDKMHAGLIDAIKPFLDYYDLVDGVSYQKAMFIFLSNAGAERITDVALDFWRSGKQRED 230
+MDKMHAGLIDAIKPFLDYYDLVDGVSYQKAMFIFLSNAGAERITDVALDFWRSGKQRED
Sbjct: 123 QMDKMHAGLIDAIKPFLDYYDLVDGVSYQKAMFIFLSNAGAERITDVALDFWRSGKQRED 182
Query: 231 IKLKDIEHALSVSVFNNKNSGFWHSSLIDRNLIDYFVPFLPLEYKHLKMCIRVEMQSRGY 290
IKLKDIEHALSVSVFNNKNSGFWHSSLIDRNLIDYFVPFLPLEYKHLKMCIRVEMQSRGY
Sbjct: 183 IKLKDIEHALSVSVFNNKNSGFWHSSLIDRNLIDYFVPFLPLEYKHLKMCIRVEMQSRGY 242
Query: 291 EIDEDIVSRVAEEMTFFPKEERVFSDKGCKTVFTKLDYYYDD 332
EIDEDIVSRVAEEMTFFPKEERVFSDKGCKTVFTKLDYYYDD
Sbjct: 243 EIDEDIVSRVAEEMTFFPKEERVFSDKGCKTVFTKLDYYYDD 284
>6EM8-A nrPDB
Length = 818
Score = 199 bits (506), Expect = 2e-51, Method: Composition-based stats.
Identities = 39/170 (22%), Positives = 79/170 (46%), Gaps = 22/170 (12%)
Query: 65 LDDNLFGQHLAKKIILNAVFGFINNPK-----PKKPL-TLSLHGWTGTGKNFVSKIIAEN 118
L+D L + + +K +N++ + + PK+P+ + G TG GK +++ +AE+
Sbjct: 502 LEDTLHERVIGQKDAVNSISKAVRRARAGLKDPKRPIGSFIFLGPTGVGKTELARALAES 561
Query: 119 IYEGGLNSDYVHLFVATLHFPHASNITL--------YKDQLQLWIRGNVSACARSIFIFD 170
++ G + + + ++ HA + + + D QL + V S+ +FD
Sbjct: 562 MF--GDDDAMIRVDMSEFMEKHAVSRLVGAPPGYVGHDDGGQLTEK--VRRKPYSVILFD 617
Query: 171 EMDKMHAGLIDAIKPFLDYYDLVD----GVSYQKAMFIFLSNAGAERITD 216
E++K H + + + LD L D V ++ + I SN GA+ + D
Sbjct: 618 EIEKAHPDVFNILLQVLDDGHLTDTKGRTVDFRNTIIIMTSNVGAQELQD 667
>6EMW-B nrPDB
Length = 225
Score = 196 bits (499), Expect = 1e-50, Method: Composition-based stats.
Identities = 39/170 (22%), Positives = 79/170 (46%), Gaps = 22/170 (12%)
Query: 65 LDDNLFGQHLAKKIILNAVFGFINNPK-----PKKPL-TLSLHGWTGTGKNFVSKIIAEN 118
L+D L + + +K +N++ + + PK+P+ + G TG GK +++ +AE+
Sbjct: 15 LEDTLHERVIGQKDAVNSISKAVRRARAGLKDPKRPIGSFIFLGPTGVGKTELARALAES 74
Query: 119 IYEGGLNSDYVHLFVATLHFPHASNITL--------YKDQLQLWIRGNVSACARSIFIFD 170
++ G + + + ++ HA + + + D QL + V S+ +FD
Sbjct: 75 MF--GDDDAMIRVDMSEFMEKHAVSRLVGAPPGYVGHDDGGQLTEK--VRRKPYSVILFD 130
Query: 171 EMDKMHAGLIDAIKPFLDYYDLVD----GVSYQKAMFIFLSNAGAERITD 216
E++K H + + + LD L D V ++ + I SN GA+ + D
Sbjct: 131 EIEKAHPDVFNILLQVLDDGHLTDTKGRTVDFRNTIIIMTSNVGAQELQD 180
>4CIU-A nrPDB
Length = 727
Score = 152 bits (383), Expect = 3e-37, Method: Composition-based stats.
Identities = 52/260 (20%), Positives = 106/260 (40%), Gaps = 47/260 (18%)
Query: 58 REALQKDLDDNLFGQHLAKKIILNAVFGFINNPK-----PKKPL-TLSLHGWTGTGKNFV 111
RE L + ++ L + + + ++AV I + P +P+ + G TG GK +
Sbjct: 414 REKLLR-MEQELHHRVIGQNEAVDAVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTEL 472
Query: 112 SKIIAENIYEGGLNSDYVHLFVATLHFPHASNITL--------YKDQLQLWIRGNVSACA 163
K +A +++ + V + ++ H+ + + Y++ L V
Sbjct: 473 CKALANFMFDS--DEAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTE--AVRRRP 528
Query: 164 RSIFIFDEMDKMHAGLIDAIKPFLDYYDLVDG----VSYQKAMFIFLSNAGAERITDVAL 219
S+ + D ++K H + + + LD L DG V ++ + I SN G++ I +
Sbjct: 529 YSVILLDAVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQE--- 585
Query: 220 DFWRSGKQREDIKLKDIEHALSVSVFNNKNSGFWHSSLIDRNLIDYFVPFLPLEYKHLKM 279
+ ++++A + S + I+R ID V F PL +H+
Sbjct: 586 ------------RFGELDYAHMKELVLGVVSHNFRPEFINR--IDEVVVFHPLGEQHIAS 631
Query: 280 CIRVE-------MQSRGYEI 292
+++ ++ RGYEI
Sbjct: 632 IAQIQLKRLYKRLEERGYEI 651
>3J3U-A nrPDB
Length = 810
Score = 151 bits (381), Expect = 4e-37, Method: Composition-based stats.
Identities = 56/270 (20%), Positives = 111/270 (41%), Gaps = 46/270 (17%)
Query: 64 DLDDNLFGQHLAKKIILNAVFGFINNPK-----PKKPL-TLSLHGWTGTGKNFVSKIIAE 117
++++ L + + + + AV + + PK+P+ + G TG GK +++ +AE
Sbjct: 501 NMENILHSRVIGQDEAVVAVAKAVRRARAGLKDPKRPIGSFIFLGPTGVGKTELARALAE 560
Query: 118 NIYEGGLNSDYVHLFVATLHFPHASNITL--------YKDQLQLWIRGNVSACARSIFIF 169
+I+ G + + ++ H+++ + Y + QL + V S+ +
Sbjct: 561 SIF--GDEESMIRIDMSEYMEKHSTSRLVGSPPGYVGYDEGGQLTEK--VRRKPYSVVLL 616
Query: 170 DEMDKMHAGLIDAIKPFLDYYDLVD----GVSYQKAMFIFLSNAGAERITD---VALDFW 222
D ++K H + + + L+ L D V ++ + I SN GA + V +
Sbjct: 617 DAIEKAHPDVFNILLQVLEDGRLTDSKGRTVDFRNTILIMTSNVGASELKRNKYVGFNVQ 676
Query: 223 RSGKQREDIKLKDIEHALSVSVFNNKNSGFWHSSLIDRNLIDYFVPFLPLEYKHL----- 277
+ +D+K K V F I+R ID + F LE KHL
Sbjct: 677 DETQNHKDMKDK---------VMGELKRAF-RPEFINR--IDEIIVFHSLEKKHLTEIVS 724
Query: 278 ----KMCIRVEMQSRGYEIDEDIVSRVAEE 303
++ R++ Q E+ + ++VAEE
Sbjct: 725 LMSDQLTKRLKEQDLSIELTDAAKAKVAEE 754
>5OFO-C nrPDB
Length = 871
Score = 150 bits (380), Expect = 7e-37, Method: Composition-based stats.
Identities = 55/260 (21%), Positives = 101/260 (38%), Gaps = 47/260 (18%)
Query: 58 REALQKDLDDNLFGQHLAKKIILNAVFGFINNPK-----PKKPL-TLSLHGWTGTGKNFV 111
RE L + ++ L + + + ++AV I + P +P+ + G TG GK +
Sbjct: 560 REKLLR-MEQELHHRVIGQNEAVDAVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTEL 618
Query: 112 SKIIAENIYEGGLNSDYVHLFVATLHFPHASNITL--------YKDQLQLWIRGNVSACA 163
K +A +++ + V + ++ H+ + + Y++ L V
Sbjct: 619 CKALANFMFDS--DEAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTE--AVRRRP 674
Query: 164 RSIFIFDEMDKMHAGLIDAIKPFLDYYDLVDG----VSYQKAMFIFLSNAGAERITDVAL 219
S+ + D ++K H + + + LD L DG V ++ + I SN G
Sbjct: 675 YSVILLDAVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGVRE------ 728
Query: 220 DFWRSGKQREDIKLKDIEHALSVSVFNNKNSGFWHSSLIDRNLIDYFVPFLPLEYKHLKM 279
+R+ I L I S F I+R ID V F PL +H+
Sbjct: 729 ------TERKSIGL--IHQDNSTDAMEEIKKIF-RPEFINR--IDEVVVFHPLGEQHIAS 777
Query: 280 CIRVE-------MQSRGYEI 292
+++ ++ RGYEI
Sbjct: 778 IAQIQLKRLYKRLEERGYEI 797
>1QVR-A nrPDB
Length = 854
Score = 146 bits (369), Expect = 1e-35, Method: Composition-based stats.
Identities = 51/272 (18%), Positives = 106/272 (38%), Gaps = 43/272 (15%)
Query: 70 FGQHLAKKIILNAVFGFINNPK-----PKKPL-TLSLHGWTGTGKNFVSKIIAENIYEGG 123
+ + + + AV I + P +P+ + G TG GK ++K +A +++
Sbjct: 557 HKRVVGQDEAIRAVADAIRRARAGLKDPNRPIGSFLFLGPTGVGKTELAKTLAATLFDT- 615
Query: 124 LNSDYVHLFVATLHFPHASNITL--------YKDQLQLWIRGNVSACARSIFIFDEMDKM 175
+ + + HA + + Y++ QL V S+ +FDE++K
Sbjct: 616 -EEAMIRIDMTEYMEKHAVSRLIGAPPGYVGYEEGGQLTE--AVRRRPYSVILFDEIEKA 672
Query: 176 HAGLIDAIKPFLDYYDLVD----GVSYQKAMFIFLSNAGAERITDVALDFWRSGKQREDI 231
H + + + LD L D V ++ + I SN G+ I + W + R+++
Sbjct: 673 HPDVFNILLQILDDGRLTDSHGRTVDFRNTVIILTSNLGSPLILEGLQKGWPYERIRDEV 732
Query: 232 KLKDIEHALSVSVFNNKNSGFWHSSLIDRNLIDYFVPFLPLEYKHLKMCIRVEMQSRGYE 291
K ++ N +D V F PL + ++ + +++
Sbjct: 733 -FKVLQQHFRPEFLNR---------------LDEIVVFRPLTKEQIRQIVEIQLSYLRAR 776
Query: 292 IDEDIVSRVAEEMTFFPKEERVFSDKGCKTVF 323
+ E R++ E+T K+ +++G VF
Sbjct: 777 LAE---KRISLELTEAAKD--FLAERGYDPVF 803
>4LJ8-A nrPDB
Length = 339
Score = 145 bits (367), Expect = 2e-35, Method: Composition-based stats.
Identities = 51/272 (18%), Positives = 106/272 (38%), Gaps = 43/272 (15%)
Query: 70 FGQHLAKKIILNAVFGFINNPK-----PKKPL-TLSLHGWTGTGKNFVSKIIAENIYEGG 123
+ + + + AV I + P +P+ + G TG GK ++K +A +++
Sbjct: 42 HKRVVGQDEAIRAVADAIRRARAGLKDPNRPIGSFLFLGPTGVGKTELAKTLAATLFDT- 100
Query: 124 LNSDYVHLFVATLHFPHASNITL--------YKDQLQLWIRGNVSACARSIFIFDEMDKM 175
+ + + HA + + Y++ QL V S+ +FDE++K
Sbjct: 101 -EEAMIQIDMTEYMEKHAVSRLIGAPPGYVGYEEGGQLTE--AVRRRPYSVILFDEIEKA 157
Query: 176 HAGLIDAIKPFLDYYDLVD----GVSYQKAMFIFLSNAGAERITDVALDFWRSGKQREDI 231
H + + + LD L D V ++ + I SN G+ I + W + R+++
Sbjct: 158 HPDVFNILLQILDDGRLTDSHGRTVDFRNTVIILTSNLGSPLILEGLQKGWPYERIRDEV 217
Query: 232 KLKDIEHALSVSVFNNKNSGFWHSSLIDRNLIDYFVPFLPLEYKHLKMCIRVEMQSRGYE 291
K ++ N +D V F PL + ++ + +++
Sbjct: 218 -FKVLQQHFRPEFLNR---------------LDEIVVFRPLTKEQIRQIVEIQLSYLRAR 261
Query: 292 IDEDIVSRVAEEMTFFPKEERVFSDKGCKTVF 323
+ E R++ E+T K+ +++G VF
Sbjct: 262 LAE---KRISLELTEAAKD--FLAERGYDPVF 288
>6ED3-A nrPDB
Length = 848
Score = 140 bits (352), Expect = 1e-33, Method: Composition-based stats.
Identities = 36/165 (21%), Positives = 68/165 (41%), Gaps = 22/165 (13%)
Query: 65 LDDNLFGQHLAKKIILNAVFGFINNPK-----PKKPL-TLSLHGWTGTGKNFVSKIIAEN 118
++D L + + +K + AV + + P +P G TG GK ++K +A+
Sbjct: 564 MEDELGKRVIGQKAAVTAVSDAVRRSRAGVSDPNRPTGAFMFLGPTGVGKTELAKALADF 623
Query: 119 IYEGGLNSDYVHLFVATLHFPHASNITL--------YKDQLQLWIRGNVSACARSIFIFD 170
+++ V + ++ H + Y+ QL V ++ +FD
Sbjct: 624 LFD--DERAMVRIDMSEYGEKHTVARLIGAPPGYVGYEAGGQLTE--AVRRRPYTVVLFD 679
Query: 171 EMDKMHAGLIDAIKPFLDYYDLVDG----VSYQKAMFIFLSNAGA 211
E++K H + D + LD L DG V ++ + I SN G+
Sbjct: 680 EIEKAHPDVFDVLLQVLDEGRLTDGHGRTVDFRNTILILTSNLGS 724
>3PXI-A nrPDB
Length = 758
Score = 138 bits (348), Expect = 3e-33, Method: Composition-based stats.
Identities = 51/259 (19%), Positives = 102/259 (39%), Gaps = 59/259 (22%)
Query: 64 DLDDNLFGQHLAKKIILNAVFGFINNPK-----PKKPL-TLSLHGWTGTGKNFVSKIIAE 117
++++ L + + + + AV + + PK+P+ + G TG GK +++ +AE
Sbjct: 484 NMENILHSRVIGQDEAVVAVAKAVRRARAGLKDPKRPIGSFIFLGPTGVGKTELARALAE 543
Query: 118 NIYEGGLNSDYVHLFVATLHFPHASNITLYKDQLQLWIRGNVSACARSIFIFDEMDKMHA 177
+I+ G + + ++ H+++ QL + V S+ + D ++K H
Sbjct: 544 SIF--GDEESMIRIDMSEYMEKHSTS------GGQLTEK--VRRKPYSVVLLDAIEKAHP 593
Query: 178 GLIDAIKPFLDYYDLVD----GVSYQKAMFIFLSNAGAERITDVALDFWRSGKQREDIKL 233
+ + + L+ L D V ++ + I SN GA V + R+
Sbjct: 594 DVFNILLQVLEDGRLTDSKGRTVDFRNTILIMTSNVGASEKDKVMGELKRA--------- 644
Query: 234 KDIEHALSVSVFNNKNSGFWHSSLIDRNLIDYFVPFLPLEYKHL---------KMCIRVE 284
+ I+R ID + F LE KHL ++ R++
Sbjct: 645 -------------------FRPEFINR--IDEIIVFHSLEKKHLTEIVSLMSDQLTKRLK 683
Query: 285 MQSRGYEIDEDIVSRVAEE 303
Q E+ + ++VAEE
Sbjct: 684 EQDLSIELTDAAKAKVAEE 702
>6D00-1 nrPDB
Length = 883
Score = 120 bits (302), Expect = 7e-28, Method: Composition-based stats.
Identities = 31/166 (18%), Positives = 64/166 (38%), Gaps = 22/166 (13%)
Query: 65 LDDNLFGQHLAKKIILNAVFGFINNPKP-----KKPL-TLSLHGWTGTGKNFVSKIIAEN 118
+++ + + + + A+ I + +PL + G TG GK K +A
Sbjct: 564 MEEYMKQHVVGQDEAIKAICDAIRLSRTGLQNRNRPLASFLFLGPTGCGKTLCVKELAAF 623
Query: 119 IYEGGLNSDYVHLFVATLHFPHASNITL--------YKDQLQLWIRGNVSACARSIFIFD 170
++ V + ++ HA + + + + QL V ++ +FD
Sbjct: 624 LFN--DPGAIVRIDMSEYMEKHAVSRLVGAPPGYIGHDEGGQLTE--AVRRRPYTVVLFD 679
Query: 171 EMDKMHAGLIDAIKPFLDYYDLVDG----VSYQKAMFIFLSNAGAE 212
EM+K H + + + LD D V ++ + + SN GA+
Sbjct: 680 EMEKAHKDVSNLLLQILDDGHCTDSKGRRVDFKNTIIVMTSNLGAD 725
>5D4W-A nrPDB
Length = 926
Score = 116 bits (290), Expect = 2e-26, Method: Composition-based stats.
Identities = 49/259 (18%), Positives = 106/259 (40%), Gaps = 38/259 (14%)
Query: 65 LDDNLFGQHLAKKIILNAVFGFINNPK-----PKKPLTLSLHGWTGTGKNFVSKIIAENI 119
++ L + +K + +V I + P +P + G +GTGK ++K +AE +
Sbjct: 592 MEQALSKIVVGQKEAVQSVSNAIRLQRSGLSNPNQPPSFLFCGPSGTGKTLLTKALAEFL 651
Query: 120 YEGGLNSDYVHLFVATLHFPHASNITL--------YKDQLQLWIRGNVSACARSIFIFDE 171
++ + ++ H+ + + + QL + SI +FD
Sbjct: 652 FD--DPKSMIRFDMSEYQERHSLSRMIGAPPGYVGHDAGGQLTE--ALRRRPFSILLFDA 707
Query: 172 MDKMHAGLIDAIKPFLDYYDLVDG----VSYQKAMFIFLSNAGAERITDVALDFWRSGKQ 227
++K ++ + +D + DG V + + + SN GAE ++ +GK
Sbjct: 708 VEKAAKEVLTVLLQLMDDGRITDGQGRVVDAKNCIVVMTSNLGAEYLSRA-----NNGK- 761
Query: 228 REDIKLKDIEHALSVSVFNNKNSGFWHSSLIDRNLIDYFVPFLPLEYKHLKMCIRV---E 284
D K+ L ++ N ++ ++R I V F L + ++ + + E
Sbjct: 762 --DGKIDPTTRELVMNTLRN----YFLPEFLNR--ISSVVIFNRLTRREIRKIVDLRIAE 813
Query: 285 MQSRGYEIDEDIVSRVAEE 303
+Q R + D +++ +V+EE
Sbjct: 814 IQKRLTDNDRNVIIKVSEE 832
>6E11-1 nrPDB
Length = 906
Score = 113 bits (284), Expect = 9e-26, Method: Composition-based stats.
Identities = 39/178 (21%), Positives = 73/178 (41%), Gaps = 24/178 (13%)
Query: 55 SLSREALQKDLD--DNLFGQHLAKKIILNAVFGFINNPK-----PKKPL-TLSLHGWTGT 106
SLS E+ + L ++L + + I+ ++ + P+KP+ T G TG
Sbjct: 583 SLSFESSKGALKLYNSLSKSIIGNEDIIKSLSDAVVKAATGMKDPEKPIGTFLFLGPTGV 642
Query: 107 GKNFVSKIIAENIYEGGLNSDYVHLFVATLHFPHASNITL--------YKDQLQLWIRGN 158
GK ++K +A ++ N + + ++ H+ + + D QL
Sbjct: 643 GKTELAKTLAIELFNSKDN--LIRVNMSEFTEAHSVSKITGSPPGYVGFSDSGQLTE--A 698
Query: 159 VSACARSIFIFDEMDKMHAGLIDAIKPFLDYYDLVD----GVSYQKAMFIFLSNAGAE 212
V S+ +FDE++K HA + + L + D + + + I SN GAE
Sbjct: 699 VREKPHSVVLFDELEKAHADVFKVLLQILGDGYINDNHRRNIDFSNTIIIMTSNLGAE 756
>5VY8-A nrPDB
Length = 908
Score = 111 bits (277), Expect = 5e-25, Method: Composition-based stats.
Identities = 32/167 (19%), Positives = 68/167 (40%), Gaps = 21/167 (12%)
Query: 65 LDDNLFGQHLAKKIILNAVFGFINNPK-----PKKPLTLSLHGWTGTGKNFVSKIIAENI 119
++ +L + + + + AV + + P++P + G +G+GK ++K +A +
Sbjct: 572 MERDLSSEVVGQMDAIKAVSNAVRLSRSGLANPRQPASFLFLGLSGSGKTELAKKVAGFL 631
Query: 120 YEGGLNSDYVHLFVATLHFPHASNITL--------YKDQLQLWIRGNVSACARSIFIFDE 171
+ + + + L +A + L Y + L + S+ +FDE
Sbjct: 632 FN--DEDMMIRVDCSELSEKYAVSKLLGTTAGYVGYDEGGFLT--NQLQYKPYSVLLFDE 687
Query: 172 MDKMHAGLIDAIKPFLDYYDLVDG----VSYQKAMFIFLSNAGAERI 214
++K H ++ + LD + G + + I SN GAE I
Sbjct: 688 VEKAHPDVLTVMLQMLDDGRITSGQGKTIDCSNCIVIMTSNLGAEFI 734
>1R6B-X nrPDB
Length = 758
Score = 100 bits (249), Expect = 9e-22, Method: Composition-based stats.
Identities = 37/249 (14%), Positives = 90/249 (36%), Gaps = 30/249 (12%)
Query: 63 KDLDDNLFGQHLAKKIILNAVFGFINNPKP-----KKPL-TLSLHGWTGTGKNFVSKIIA 116
K+L D L + + A+ I + KP+ + G TG GK V+ ++
Sbjct: 450 KNLGDRLKMLVFGQDKAIEALTEAIKMARAGLGHEHKPVGSFLFAGPTGVGKTEVTVQLS 509
Query: 117 ENIYEGGLNSDYVHLFVATLHFPHASNITL--------YKDQLQLWIRGNVSACARSIFI 168
+ L + + ++ H + + + L V ++ +
Sbjct: 510 K-----ALGIELLRFDMSEYMERHTVSRLIGAPPGYVGFDQGGLLTD--AVIKHPHAVLL 562
Query: 169 FDEMDKMHAGLIDAIKPFLDYYDLVDG----VSYQKAMFIFLSNAGAERITDVALDFWRS 224
DE++K H + + + +D L D ++ + + +NAG ++
Sbjct: 563 LDEIEKAHPDVFNILLQVMDNGTLTDNNGRKADFRNVVLVMTTNAGVRETERKSIGLIHQ 622
Query: 225 GKQREDIKLKDIEHALSVSVFNNKNSGFWHSSL---IDRNLIDYFVPFLPLEYKHLKMCI 281
+ +++I+ + N ++ W L + ++D F+ L ++ + +
Sbjct: 623 DNSTD--AMEEIKKIFTPEFRNRLDNIIWFDHLSTDVIHQVVDKFIVELQVQLDQKGVSL 680
Query: 282 RVEMQSRGY 290
V ++R +
Sbjct: 681 EVSQEARNW 689
>2CHG-A nrPDB
Length = 226
Score = 40.7 bits (94), Expect = 0.001, Method: Composition-based stats.
Identities = 17/120 (14%), Positives = 46/120 (38%), Gaps = 7/120 (5%)
Query: 71 GQHLAKKIILNAVFGFINNPKPKKPLTLSLHGWTGTGKNFVSKIIAENIYEGGLNSDYVH 130
+ + + ++ + G++ K L G GTGK + +A +++ +++
Sbjct: 17 DEVVGQDEVIQRLKGYVER---KNIPHLLFSGPPGTGKTATAIALARDLFGENWRDNFIE 73
Query: 131 LFVATLHFPHASNITLYKDQLQLWIRGNVSACARSIFIFDEMDKMHAGLIDAIKPFLDYY 190
+ + ++ +K + + + I DE D + A A++ ++ Y
Sbjct: 74 MNASD---ERGIDVVRHKIK-EFARTAPIGGAPFKIIFLDEADALTADAQAALRRTMEMY 129
>2CHV-A nrPDB
Length = 319
Score = 40.0 bits (92), Expect = 0.001, Method: Composition-based stats.
Identities = 17/120 (14%), Positives = 46/120 (38%), Gaps = 7/120 (5%)
Query: 71 GQHLAKKIILNAVFGFINNPKPKKPLTLSLHGWTGTGKNFVSKIIAENIYEGGLNSDYVH 130
+ + + ++ + G++ K L G GTGK + +A +++ +++
Sbjct: 17 DEVVGQDEVIQRLKGYVER---KNIPHLLFSGPPGTGKTATAIALARDLFGENWRDNFIE 73
Query: 131 LFVATLHFPHASNITLYKDQLQLWIRGNVSACARSIFIFDEMDKMHAGLIDAIKPFLDYY 190
+ + ++ +K + + + I DE D + A A++ ++ Y
Sbjct: 74 MNASD---ERGIDVVRHKIK-EFARTAPIGGAPFKIIFLDEADALTADAQAALRRTMEMY 129
>3M6A-A nrPDB
Length = 543
Score = 36.9 bits (84), Expect = 0.013, Method: Composition-based stats.
Identities = 33/160 (20%), Positives = 59/160 (36%), Gaps = 22/160 (13%)
Query: 65 LDDNLFGQHLAKKIILNAVFGFINNPKPKKPLTLSLHGWTGTGKNFVSKIIAENIYEGGL 124
LD+ G K+ IL + K P+ L L G G GK ++K IA++ L
Sbjct: 79 LDEEHHGLEKVKERILEYLAVQKLTKSLKGPI-LCLAGPPGVGKTSLAKSIAKS-----L 132
Query: 125 NSDYVHLFVATLHFPHAS--NITLYKDQ--LQLWIRGNVSACARSIFIFDEMDKMHAGL- 179
+V + + + + Y ++ + +F+ DE+DKM +
Sbjct: 133 GRKFVRISLGGVRDESEIRGHRRTYVGAMPGRIIQGMKKAGKLNPVFLLDEIDKMSSDFR 192
Query: 180 ---IDAIKPFLD--------YYDLVDGVSYQKAMFIFLSN 208
A+ LD + + + K +FI +N
Sbjct: 193 GDPSSAMLEVLDPEQNSSFSDHYIEETFDLSKVLFIATAN 232
>3H4M-A nrPDB
Length = 285
Score = 36.1 bits (82), Expect = 0.020, Method: Composition-based stats.
Identities = 24/90 (26%), Positives = 39/90 (43%), Gaps = 11/90 (12%)
Query: 95 PLTLSLHGWTGTGKNFVSKIIAENIYEGGLNSDYVHLFVATLHFPH-ASNITLYKDQLQL 153
P + L+G GTGK ++K +A N+ ++ + + L +L KD +L
Sbjct: 51 PKGILLYGPPGTGKTLLAKAVATET-----NATFIRVVGSELVKKFIGEGASLVKDIFKL 105
Query: 154 WIRGNVSACARSIFIFDEMDKMHAGLIDAI 183
A SI DE+D + A DA+
Sbjct: 106 -----AKEKAPSIIFIDEIDAIAAKRTDAL 130
>1SXJ-C nrPDB
Length = 340
Score = 36.1 bits (82), Expect = 0.022, Method: Composition-based stats.
Identities = 25/139 (17%), Positives = 52/139 (37%), Gaps = 16/139 (11%)
Query: 71 GQHLAKKIILNAVFGFINNPKPKKPLTLSLHGWTGTGKNFVSKIIAENIYEGGLNSDYVH 130
+ + ++ V F++ K L +G GTGK +A IY ++ +
Sbjct: 25 DEVYGQNEVITTVRKFVDEGKLPH---LLFYGPPGTGKTSTIVALAREIYGKNYSNMVLE 81
Query: 131 LFVATLHFPHASNITLYKDQLQ-LWIRGNVSACARSIFIFDEMDKMHAGLIDAIKPFLDY 189
L + I + ++Q++ + + + I DE D M +A++ ++
Sbjct: 82 LNASD-----DRGIDVVRNQIKDFASTRQIFSKGFKLIILDEADAMTNAAQNALRRVIER 136
Query: 190 YDLVDGVSYQKAMFIFLSN 208
Y + F L+N
Sbjct: 137 YT-------KNTRFCVLAN 148
>1OFI-A nrPDB
Length = 310
Score = 34.9 bits (79), Expect = 0.043, Method: Composition-based stats.
Identities = 22/131 (16%), Positives = 48/131 (36%), Gaps = 19/131 (14%)
Query: 59 EALQKDLDDNLFGQHLAKKIILNAVFGFINN-------PKPKK----PLTLSLHGWTGTG 107
E +++ L + + AV + N +P + P + + G TG G
Sbjct: 3 EMTPREIVSELDQHIIGQADAKRAVAIALRNRWRRMQLQEPLRHEVTPKNILMIGPTGVG 62
Query: 108 KNFVSKIIAENIYEGGLNSDYVHLFVATLHFPHASNITLYKDQLQLWIR--GNVSACARS 165
K +++ +A+ N+ ++ + + L G + A ++
Sbjct: 63 KTEIARRLAKLA-----NAPFIKVEATKFTEVGYVGKEVDSIIRDLTDSAGGAIDAVEQN 117
Query: 166 IFIF-DEMDKM 175
+F DE+DK+
Sbjct: 118 GIVFIDEIDKI 128
>3EC2-A nrPDB
Length = 180
Score = 34.9 bits (79), Expect = 0.047, Method: Composition-based stats.
Identities = 13/55 (23%), Positives = 27/55 (49%)
Query: 67 DNLFGQHLAKKIILNAVFGFINNPKPKKPLTLSLHGWTGTGKNFVSKIIAENIYE 121
D +++++ L + F++N P++ L+ G G GK ++ + IYE
Sbjct: 10 DTYHPKNVSQNRALLTIRVFVHNFNPEEGKGLTFVGSPGVGKTHLAVATLKAIYE 64
>4I5O-A nrPDB
Length = 363
Score = 34.9 bits (79), Expect = 0.051, Method: Composition-based stats.
Identities = 30/125 (24%), Positives = 51/125 (40%), Gaps = 15/125 (12%)
Query: 61 LQKDLDDNLFGQHLAKKIILNAVF---GFINNPKPKKPLTL-----SLHGWTGTGKNFVS 112
++ LDD + GQ AKK++ AV+ + N + L L G TG+GK ++
Sbjct: 9 IRNHLDDYVIGQEQAKKVLAVAVYNHYKRLRNGDTSNGVELGKSNILLIGPTGSGKTLLA 68
Query: 113 KIIAENIYEGGLNSDYVHLFVATLHFPHASNITLYKDQLQLWIRG--NVSACARSIFIFD 170
+ +A L+ + TL + +L + +V R I D
Sbjct: 69 ETLARL-----LDVPFTMADATTLTEAGYVGEDVENIIQKLLQKCDYDVQKAQRGIVYID 123
Query: 171 EMDKM 175
E+DK+
Sbjct: 124 EIDKI 128
>3PVS-A nrPDB
Length = 447
Score = 33.8 bits (76), Expect = 0.096, Method: Composition-based stats.
Identities = 23/122 (18%), Positives = 44/122 (36%), Gaps = 12/122 (9%)
Query: 72 QHLAKKIILNAVFGFINNPKPKKPLTLSLHGWTGTGKNFVSKIIAENIYEGGLNSDYVHL 131
Q++ ++ +L A + ++ L G GTGK ++++IA Y +
Sbjct: 27 QYIGQQHLLAAGKPLPRAIEAGHLHSMILWGPPGTGKTTLAEVIAR--YANADVERISAV 84
Query: 132 FVATLHFPHASNITLYKDQLQLWIRGNVSACARSIFIFDEMDKMHAGLIDAIKPFLDYYD 191
A R N +A R+I DE+ + + DA P ++
Sbjct: 85 TSGVKEIREAIERA----------RQNRNAGRRTILFVDEVHRFNKSQQDAFLPHIEDGT 134
Query: 192 LV 193
+
Sbjct: 135 IT 136
>1IM2-A nrPDB
Length = 444
Score = 33.8 bits (76), Expect = 0.11, Method: Composition-based stats.
Identities = 13/70 (18%), Positives = 28/70 (40%), Gaps = 11/70 (15%)
Query: 59 EALQKDLDDNLFGQHLAKKIILNAVFGFINN-------PKPKK----PLTLSLHGWTGTG 107
E +++ L + + AV + N +P + P + + G TG G
Sbjct: 3 EMTPREIVSELDQHIIGQADAKRAVAIALRNRWRRMQLQEPLRHEVTPKNILMIGPTGVG 62
Query: 108 KNFVSKIIAE 117
K +++ +A+
Sbjct: 63 KTEIARRLAK 72
>5WVI-K nrPDB
Length = 428
Score = 33.4 bits (75), Expect = 0.13, Method: Composition-based stats.
Identities = 19/89 (21%), Positives = 35/89 (39%), Gaps = 11/89 (12%)
Query: 95 PLTLSLHGWTGTGKNFVSKIIAENIYEGGLNSDYVHLFVATLHFPH-ASNITLYKDQLQL 153
P + L+G GTGK + K +A + + ++ + + + + +D +L
Sbjct: 206 PRGVLLYGPPGTGKTMLVKAVANST-----KAAFIRVNGSEFVHKYLGEGPRMVRDVFRL 260
Query: 154 WIRGNVSACARSIFIFDEMDKMHAGLIDA 182
A SI DE+D + DA
Sbjct: 261 -----ARENAPSIIFIDEVDSIATKRFDA 284
>1SXJ-D nrPDB
Length = 353
Score = 33.4 bits (75), Expect = 0.13, Method: Composition-based stats.
Identities = 21/104 (20%), Positives = 41/104 (39%), Gaps = 15/104 (14%)
Query: 98 LSLHGWTGTGKNFVSKIIAENIYEGGLNSDYVHLFVATLHFPHASNITLYKDQLQLWIRG 157
+ +G GTGK + + +Y D + + L+ I++ +++++ + R
Sbjct: 61 MLFYGPPGTGKTSTILALTKELYGP----DLMKSRILELNASDERGISIVREKVKNFARL 116
Query: 158 NVSAC-----------ARSIFIFDEMDKMHAGLIDAIKPFLDYY 190
VS I I DE D M A A++ ++ Y
Sbjct: 117 TVSKPSKHDLENYPCPPYKIIILDEADSMTADAQSALRRTMETY 160
>3WHK-A nrPDB
Length = 270
Score = 33.4 bits (75), Expect = 0.14, Method: Composition-based stats.
Identities = 19/89 (21%), Positives = 38/89 (42%), Gaps = 13/89 (14%)
Query: 95 PLTLSLHGWTGTGKNFVSKIIAENIYEGGLNSDYVHLFVATLHFPH--ASNITLYKDQLQ 152
P + L+G G GK ++K IA + N+ ++ + + L + ++ +
Sbjct: 51 PKGVLLYGPPGCGKTLMAKAIAHEV-----NATFIRVVGSELVRKYIGEGARLVH----E 101
Query: 153 LWIRGNVSACARSIFIFDEMDKMHAGLID 181
L+ A +I DE+D + A +D
Sbjct: 102 LFE--LAKEKAPTIIFIDEIDAIGAKRLD 128
>6EF1-K nrPDB
Length = 276
Score = 33.4 bits (75), Expect = 0.14, Method: Composition-based stats.
Identities = 19/89 (21%), Positives = 35/89 (39%), Gaps = 11/89 (12%)
Query: 95 PLTLSLHGWTGTGKNFVSKIIAENIYEGGLNSDYVHLFVATLHFPH-ASNITLYKDQLQL 153
P + L+G GTGK + K +A + + ++ + + + + +D +L
Sbjct: 54 PRGVLLYGPPGTGKTMLVKAVANST-----KAAFIRVNGSEFVHKYLGEGPRMVRDVFRL 108
Query: 154 WIRGNVSACARSIFIFDEMDKMHAGLIDA 182
A SI DE+D + DA
Sbjct: 109 -----ARENAPSIIFIDEVDSIATKRFDA 132
>6EF2-J nrPDB
Length = 262
Score = 33.4 bits (75), Expect = 0.15, Method: Composition-based stats.
Identities = 18/82 (21%), Positives = 35/82 (42%), Gaps = 13/82 (15%)
Query: 94 KPLTLSLHGWTGTGKNFVSKIIAENIYEGGLNSDYVHLFVATLHFPHASNITLYKDQLQL 153
+P + L+G GTGK +++ +A + + ++ + A L + + ++
Sbjct: 38 QPKGVILYGPPGTGKTLLARAVAHHT-----DCKFIRVSGAELVQKYIG------EGSRM 86
Query: 154 WIRGNVSAC--ARSIFIFDEMD 173
V A A SI DE+D
Sbjct: 87 VRELFVMAREHAPSIIFMDEID 108
>5EQT-A nrPDB
Length = 257
Score = 33.0 bits (74), Expect = 0.18, Method: Composition-based stats.
Identities = 18/89 (20%), Positives = 38/89 (42%), Gaps = 13/89 (14%)
Query: 95 PLTLSLHGWTGTGKNFVSKIIAENIYEGGLNSDYVHLFVATLHFPH--ASNITLYKDQLQ 152
P + L+G G GK ++K +A + N+ ++ + + L + ++ +
Sbjct: 39 PKGVLLYGPPGCGKTLMAKALAHEV-----NATFIRVVGSELVRKYIGEGARLVH----E 89
Query: 153 LWIRGNVSACARSIFIFDEMDKMHAGLID 181
L+ A +I DE+D + A +D
Sbjct: 90 LFE--LAKEKAPTIIFIDEIDAIGAKRMD 116
>4D81-A nrPDB
Length = 283
Score = 33.0 bits (74), Expect = 0.19, Method: Composition-based stats.
Identities = 37/161 (22%), Positives = 63/161 (39%), Gaps = 26/161 (16%)
Query: 95 PLTLSLHGWTGTGKNFVSKIIAENIYEGGLNSDYVHLFVATLH-----FPHASNITLYKD 149
P + L+G G GK ++ +A L+S+++H+ A++ + ++K
Sbjct: 45 PRGILLYGPPGCGKTMIAAAVANE-----LDSEFIHVDAASIMSKWLGEAEKNVAKIFKT 99
Query: 150 QLQLWIRGNVSACARSIFIFDEMDKMHAGLIDAI-------KPFLDYYD-LVDGVSYQKA 201
+L + N A I DE+D + A + FL D L D K
Sbjct: 100 ARELSKKENKPA----IIFIDELDALLASYTSEVGGEARVRNQFLKEMDGLADKNEISKV 155
Query: 202 MFIFLSNAGAERITDVALDFWRSGKQREDIKLKDIEHALSV 242
I +N R+ + F R ++R I L D H L +
Sbjct: 156 YVIGATNK-PWRLDE---PFLRRFQKRIYITLPDKAHRLEL 192
>6EF3-H nrPDB
Length = 467
Score = 33.0 bits (74), Expect = 0.20, Method: Composition-based stats.
Identities = 15/89 (16%), Positives = 32/89 (35%), Gaps = 13/89 (14%)
Query: 95 PLTLSLHGWTGTGKNFVSKIIAENIYEGGLNSDYVHLFVATLHFPHASNITLYKDQLQLW 154
P + L+G GTGK ++ +A ++ ++ + + L + + ++
Sbjct: 243 PKGILLYGPPGTGKTLCARAVANRT-----DATFIRVIGSELVQKYVG------EGARMV 291
Query: 155 IR--GNVSACARSIFIFDEMDKMHAGLID 181
I FDE+D + D
Sbjct: 292 RELFEMARTKKACIIFFDEIDAVGGARFD 320
>6EF0-H nrPDB
Length = 257
Score = 33.0 bits (74), Expect = 0.20, Method: Composition-based stats.
Identities = 15/89 (16%), Positives = 32/89 (35%), Gaps = 13/89 (14%)
Query: 95 PLTLSLHGWTGTGKNFVSKIIAENIYEGGLNSDYVHLFVATLHFPHASNITLYKDQLQLW 154
P + L+G GTGK ++ +A ++ ++ + + L + + ++
Sbjct: 43 PKGILLYGPPGTGKTLCARAVANRT-----DATFIRVIGSELVQKYVG------EGARMV 91
Query: 155 IR--GNVSACARSIFIFDEMDKMHAGLID 181
I FDE+D + D
Sbjct: 92 RELFEMARTKKACIIFFDEIDAVGGARFD 120
>3JCO-J nrPDB
Length = 405
Score = 33.0 bits (74), Expect = 0.20, Method: Composition-based stats.
Identities = 18/82 (21%), Positives = 35/82 (42%), Gaps = 13/82 (15%)
Query: 94 KPLTLSLHGWTGTGKNFVSKIIAENIYEGGLNSDYVHLFVATLHFPHASNITLYKDQLQL 153
+P + L+G GTGK +++ +A + + ++ + A L + + ++
Sbjct: 181 QPKGVILYGPPGTGKTLLARAVAHHT-----DCKFIRVSGAELVQKYIG------EGSRM 229
Query: 154 WIRGNVSAC--ARSIFIFDEMD 173
V A A SI DE+D
Sbjct: 230 VRELFVMAREHAPSIIFMDEID 251
>1UM8-A nrPDB
Length = 376
Score = 32.6 bits (73), Expect = 0.23, Method: Composition-based stats.
Identities = 22/79 (27%), Positives = 34/79 (43%), Gaps = 3/79 (3%)
Query: 97 TLSLHGWTGTGKNFVSKIIAENIYEGGLNSDYVHLFVATLHFPHASNITLYKDQLQLWIR 156
+ L G TG+GK +++ +A+++ SD L A NI Q W
Sbjct: 74 NILLIGPTGSGKTLMAQTLAKHLDIPIAISDATSLTEAGYVGEDVENILTRLLQASDW-- 131
Query: 157 GNVSACARSIFIFDEMDKM 175
NV + I DE+DK+
Sbjct: 132 -NVQKAQKGIVFIDEIDKI 149
>6HE4-H nrPDB
Length = 267
Score = 32.3 bits (72), Expect = 0.32, Method: Composition-based stats.
Identities = 19/84 (22%), Positives = 34/84 (40%), Gaps = 11/84 (13%)
Query: 95 PLTLSLHGWTGTGKNFVSKIIAENIYEGGLNSDYVHLFVATLHFPH-ASNITLYKDQLQL 153
P + L+G GTGK ++K +A + ++ + + + L ++ QL
Sbjct: 53 PKGVLLYGPPGTGKTLLAKAVANQT-----RATFIRVVGSEFVQKYIGEGARLVREVFQL 107
Query: 154 WIRGNVSACARSIFIFDEMDKMHA 177
A SI DE+D + A
Sbjct: 108 -----AKEKAPSIIFIDELDAIAA 126
>5VHO-A nrPDB
Length = 267
Score = 32.3 bits (72), Expect = 0.34, Method: Composition-based stats.
Identities = 30/170 (17%), Positives = 64/170 (37%), Gaps = 34/170 (20%)
Query: 95 PLTLSLHGWTGTGKNFVSKIIAENIYEGGLNSDYVHLFVATLHFPHASNITLYKDQLQLW 154
P + L G GTGK ++ +A ++ ++ + + L + + ++
Sbjct: 52 PKGVLLFGPPGTGKTLCARAVANRT-----DACFIRVIGSELVQKYVG------EGARMV 100
Query: 155 IR--GNVSACARSIFIFDEMDKMHAGLID--------AIKPFLDYYDLVDGVSYQKAMFI 204
+ FDE+D + D + L+ + +DG + + +
Sbjct: 101 RELFEMARTKKACLIFFDEIDAIGGARFDDGAGGDNEVQRTMLELINQLDGFDPRGNIKV 160
Query: 205 FLSNAGAERITDVALDFWRSGK--QREDIKLKDIE--------HALSVSV 244
++ + + D AL R G+ ++ + L D+E HA S+SV
Sbjct: 161 LMATNRPDTL-DPAL--MRPGRLDRKIEFSLPDLEGRTHIFKIHARSMSV 207
>5VFU-A nrPDB
Length = 361
Score = 32.3 bits (72), Expect = 0.35, Method: Composition-based stats.
Identities = 30/170 (17%), Positives = 64/170 (37%), Gaps = 34/170 (20%)
Query: 95 PLTLSLHGWTGTGKNFVSKIIAENIYEGGLNSDYVHLFVATLHFPHASNITLYKDQLQLW 154
P + L G GTGK ++ +A ++ ++ + + L + + ++
Sbjct: 137 PKGVLLFGPPGTGKTLCARAVANRT-----DACFIRVIGSELVQKYVG------EGARMV 185
Query: 155 IR--GNVSACARSIFIFDEMDKMHAGLID--------AIKPFLDYYDLVDGVSYQKAMFI 204
+ FDE+D + D + L+ + +DG + + +
Sbjct: 186 RELFEMARTKKACLIFFDEIDAIGGARFDDGAGGDNEVQRTMLELINQLDGFDPRGNIKV 245
Query: 205 FLSNAGAERITDVALDFWRSGK--QREDIKLKDIE--------HALSVSV 244
++ + + D AL R G+ ++ + L D+E HA S+SV
Sbjct: 246 LMATNRPDTL-DPAL--MRPGRLDRKIEFSLPDLEGRTHIFKIHARSMSV 292
>5UBV-A nrPDB
Length = 246
Score = 31.9 bits (71), Expect = 0.36, Method: Composition-based stats.
Identities = 26/108 (24%), Positives = 38/108 (35%), Gaps = 25/108 (23%)
Query: 77 KIILNAVFGFINNPKP------KKPLTLSLHGWTGTGKNFVSKIIAEN-----IYEGGLN 125
K L + F+ NP+ K P + L G GTGK +++ +A Y G
Sbjct: 15 KEELQELVEFLRNPEKFSNLGGKLPKGVLLVGPPGTGKTLLARAVAGEAGVPFFYMSGSE 74
Query: 126 SDYVHLFVATLHFPHASNITLYKDQLQLWIRGNVSACARSIFIFDEMD 173
D +++ V N A A SI DE+D
Sbjct: 75 FDEIYVGVGAKRVRELFN--------------AAKAKAPSIVFIDELD 108
>6HE9-H nrPDB
Length = 390
Score = 31.9 bits (71), Expect = 0.37, Method: Composition-based stats.
Identities = 19/84 (22%), Positives = 34/84 (40%), Gaps = 11/84 (13%)
Query: 95 PLTLSLHGWTGTGKNFVSKIIAENIYEGGLNSDYVHLFVATLHFPH-ASNITLYKDQLQL 153
P + L+G GTGK ++K +A + ++ + + + L ++ QL
Sbjct: 167 PKGVLLYGPPGTGKTLLAKAVANQT-----RATFIRVVGSEFVQKYIGEGARLVREVFQL 221
Query: 154 WIRGNVSACARSIFIFDEMDKMHA 177
A SI DE+D + A
Sbjct: 222 -----AKEKAPSIIFIDELDAIAA 240
>3PFI-A nrPDB
Length = 338
Score = 31.9 bits (71), Expect = 0.38, Method: Composition-based stats.
Identities = 25/136 (18%), Positives = 49/136 (36%), Gaps = 19/136 (13%)
Query: 59 EALQKDLDDNLFGQHLAKKIILNAVFGFINNPKPKKPL--TLSLHGWTGTGKNFVSKIIA 116
E + L + F ++ ++ I + FI K + + G G GK ++ II+
Sbjct: 17 ETYETSLRPSNFDGYIGQESIKKNLNVFIAAAKKRNECLDHILFSGPAGLGKTTLANIIS 76
Query: 117 ENIYEGGLNSDYVHLFVATLHFPHASNITLYKDQLQLWIRGNVSACARSIFIFDEMDKMH 176
+ S + A + K I N+S I DE+ ++
Sbjct: 77 YEM------SANIKTTAAPMIE---------KSGDLAAILTNLSEG--DILFIDEIHRLS 119
Query: 177 AGLIDAIKPFLDYYDL 192
+ + + P ++ Y L
Sbjct: 120 PAIEEVLYPAMEDYRL 135
>4LCB-A nrPDB
Length = 367
Score = 31.9 bits (71), Expect = 0.38, Method: Composition-based stats.
Identities = 17/88 (19%), Positives = 34/88 (38%), Gaps = 12/88 (13%)
Query: 59 EALQKDLDDNLFGQHLAKKIILNAVFGFINNPKPKK-------PLTLSLHGWTGTGKNFV 111
E + K+ F + + A+ I P + P + L+G G GK +
Sbjct: 87 ELIMKEKPKVSFSDIVGLDDVKEALKEAIIYPSKRPDLFPLGWPRGILLYGPPGNGKTML 146
Query: 112 SKIIAENIYEGGLNSDYVHLFVATLHFP 139
+ +A I +S ++H+ A++
Sbjct: 147 AAAVANEI-----DSYFIHVDAASIMSK 169
>5KWA-A nrPDB
Length = 497
Score = 31.9 bits (71), Expect = 0.46, Method: Composition-based stats.
Identities = 35/161 (21%), Positives = 65/161 (40%), Gaps = 27/161 (16%)
Query: 93 KKPLTLSLHGWTGTGKNFVSKIIAENIYEG-----GLNSDYVHLFVATLHFPHASNITLY 147
+ P + L+G G GK ++K +A ++ + G ++ + + P N +
Sbjct: 179 RPPKGVLLYGPPGCGKTLIAKAVANSLAKKMAEVRGDDAHEAKSYFLNIKGPELLNKFVG 238
Query: 148 KDQLQLWI-----RGNVSACARSIFIFDEMDK--------MHAGL-IDAIKPFLDYYDLV 193
+ + + + R S I FDEMD + + + + L D V
Sbjct: 239 ETERHIRLIFQRAREKASEGTPVIVFFDEMDSIFRTRGTGVSSDVETTVVPQLLSEIDGV 298
Query: 194 DGVSYQKAMFIFLSNAGAERITDVALDFWRSGKQREDIKLK 234
+G+ + + I SN E + D A+ R G R D+K+K
Sbjct: 299 EGL--ENVIVIGASN--REDMIDPAI--LRPG--RLDVKIK 331
>5VHP-C nrPDB
Length = 266
Score = 31.5 bits (70), Expect = 0.54, Method: Composition-based stats.
Identities = 19/93 (20%), Positives = 38/93 (40%), Gaps = 16/93 (17%)
Query: 83 VFGFINNPKPKKPLTLSLHGWTGTGKNFVSKIIAENIYEGGLNSDYVHLFVATLHFPHAS 142
+F + +PK + L+G GTGK +++ +A + + ++ + + L
Sbjct: 45 LFEALGIAQPK---GVLLYGPPGTGKTLLARAVAHHT-----DCTFIRVSGSELVQK--- 93
Query: 143 NITLYKDQLQLWIRGNVSAC--ARSIFIFDEMD 173
+ ++ V A A SI DE+D
Sbjct: 94 ---FIGEGARMVRELFVMAREHAPSIIFMDEID 123
>5M32-h nrPDB
Length = 355
Score = 31.5 bits (70), Expect = 0.55, Method: Composition-based stats.
Identities = 19/93 (20%), Positives = 38/93 (40%), Gaps = 16/93 (17%)
Query: 83 VFGFINNPKPKKPLTLSLHGWTGTGKNFVSKIIAENIYEGGLNSDYVHLFVATLHFPHAS 142
+F + +PK + L+G GTGK +++ +A + + ++ + + L
Sbjct: 137 LFEALGIAQPK---GVLLYGPPGTGKTLLARAVAHHT-----DCTFIRVSGSELVQK--- 185
Query: 143 NITLYKDQLQLWIRGNVSAC--ARSIFIFDEMD 173
+ ++ V A A SI DE+D
Sbjct: 186 ---FIGEGARMVRELFVMAREHAPSIIFMDEID 215
>6EJ5-A nrPDB
Length = 637
Score = 31.5 bits (70), Expect = 0.57, Method: Composition-based stats.
Identities = 33/136 (24%), Positives = 52/136 (38%), Gaps = 28/136 (20%)
Query: 34 LTGYIYPRLYCLFAECCGQKRSLSREALQKDLDDNLFGQHLAKKIILNAVFGFINNPKPK 93
++GYIY +L E K L + + L D Q A K +L +
Sbjct: 160 VSGYIYHKLLGHEVEDVIIKCQLPKRFTAQGLPDLNHSQVYAVKTVL------------Q 207
Query: 94 KPLTLSLHGWTGTGKNFVSKIIAENIYEGGLNSDYV----HLFVATLHFPHASNITLYKD 149
+PL+L G GTGK S I ++ G V ++ V L +++
Sbjct: 208 RPLSLI-QGPPGTGKTVTSATIVYHLARQGNGPVLVCAPSNIAVDQLTEK------IHQT 260
Query: 150 QLQLWIRGNVSACARS 165
L++ V CA+S
Sbjct: 261 GLKV-----VRLCAKS 271
>2WJV-A nrPDB
Length = 800
Score = 31.5 bits (70), Expect = 0.57, Method: Composition-based stats.
Identities = 33/136 (24%), Positives = 52/136 (38%), Gaps = 28/136 (20%)
Query: 34 LTGYIYPRLYCLFAECCGQKRSLSREALQKDLDDNLFGQHLAKKIILNAVFGFINNPKPK 93
++GYIY +L E K L + + L D Q A K +L +
Sbjct: 323 VSGYIYHKLLGHEVEDVIIKCQLPKRFTAQGLPDLNHSQVYAVKTVL------------Q 370
Query: 94 KPLTLSLHGWTGTGKNFVSKIIAENIYEGGLNSDYV----HLFVATLHFPHASNITLYKD 149
+PL+L G GTGK S I ++ G V ++ V L +++
Sbjct: 371 RPLSLI-QGPPGTGKTVTSATIVYHLARQGNGPVLVCAPSNIAVDQLTEK------IHQT 423
Query: 150 QLQLWIRGNVSACARS 165
L++ V CA+S
Sbjct: 424 GLKV-----VRLCAKS 434
>5GJQ-J nrPDB
Length = 406
Score = 31.5 bits (70), Expect = 0.61, Method: Composition-based stats.
Identities = 19/93 (20%), Positives = 38/93 (40%), Gaps = 16/93 (17%)
Query: 83 VFGFINNPKPKKPLTLSLHGWTGTGKNFVSKIIAENIYEGGLNSDYVHLFVATLHFPHAS 142
+F + +PK + L+G GTGK +++ +A + + ++ + + L
Sbjct: 174 LFEALGIAQPK---GVLLYGPPGTGKTLLARAVAHHT-----DCTFIRVSGSELVQK--- 222
Query: 143 NITLYKDQLQLWIRGNVSAC--ARSIFIFDEMD 173
+ ++ V A A SI DE+D
Sbjct: 223 ---FIGEGARMVRELFVMAREHAPSIIFMDEID 252
>2X8A-A nrPDB
Length = 274
Score = 31.1 bits (69), Expect = 0.62, Method: Composition-based stats.
Identities = 32/142 (22%), Positives = 55/142 (38%), Gaps = 30/142 (21%)
Query: 82 AVFGFINNPKPKK------PLTLSLHGWTGTGKNFVSKIIAENIYEGGLNSDYVHLFVAT 135
A+ + NP K P + L G G GK ++K +A E GLN ++ +
Sbjct: 25 AILAPVRNPDQFKALGLVTPAGVLLAGPPGCGKTLLAKAVAN---ESGLN--FISVKGPE 79
Query: 136 L--HFPHASNITLYKDQLQLWIRGNVSACARSIFIFDEMDKMHAGLID--------AIKP 185
L + S + Q++ R SA + FDE+D + D +
Sbjct: 80 LLNMYVGESERAVR----QVFQRAKNSAP--CVIFFDEVDALCPRRSDRETGASVRVVNQ 133
Query: 186 FLDYYDLVDGVSYQKAMFIFLS 207
L +DG+ ++ +FI +
Sbjct: 134 LLTE---MDGLEARQQVFIMAA 152
>3HU1-A nrPDB
Length = 489
Score = 31.1 bits (69), Expect = 0.66, Method: Composition-based stats.
Identities = 53/235 (22%), Positives = 90/235 (38%), Gaps = 42/235 (17%)
Query: 40 PRLYCLFA-----ECCGQ--KRSLSREALQKDLDDNLFG--QHLAK-KIILN------AV 83
P YC+ A C G+ KR E+L + D++ G + LA+ K ++ A+
Sbjct: 170 PSPYCIVAPDTVIHCEGEPIKREDEEESLNEVGYDDIGGCRKQLAQIKEMVELPLRHPAL 229
Query: 84 FGFINNPKPKKPLTLSLHGWTGTGKNFVSKIIAENIYEGGLNSDYVHLFVATLHFPHASN 143
F I K P + L+G GTGK +++ +A E G F ++ P +
Sbjct: 230 FKAIG---VKPPRGILLYGPPGTGKTLIARAVAN---ETG-------AFFFLINGPEIMS 276
Query: 144 ITLYKDQLQLWIR-GNVSACARSIFIFDEMD-------KMHAGL-IDAIKPFLDYYDLVD 194
+ + L A +I DE+D K H + + L L+D
Sbjct: 277 KLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKREKTHGEVERRIVSQLLT---LMD 333
Query: 195 GVSYQKAMFIFLSNAGAERITDVALDFWRSGKQREDIKLKDIEHALSVSVFNNKN 249
G+ + + + + I D AL + + DI + D L + + KN
Sbjct: 334 GLKQRAHVIVMAATNRPNSI-DPALRRFGRFDREVDIGIPDATGRLEILQIHTKN 387
>3CR8-A nrPDB
Length = 552
Score = 31.1 bits (69), Expect = 0.70, Method: Composition-based stats.
Identities = 12/52 (23%), Positives = 27/52 (51%), Gaps = 6/52 (11%)
Query: 90 PKPKKPLTLSLHGWTGTGKNFVSKIIAENIYEGG------LNSDYVHLFVAT 135
P+ ++ T+ G +G GK+ +++ +A + E G L+ D V +++
Sbjct: 364 PRERQGFTVFFTGLSGAGKSTLARALAARLMEMGGRCVTLLDGDIVRRHLSS 415
>4YPL-A nrPDB
Length = 555
Score = 31.1 bits (69), Expect = 0.77, Method: Composition-based stats.
Identities = 28/164 (17%), Positives = 53/164 (32%), Gaps = 30/164 (18%)
Query: 69 LFGQHLAKKIILNAVFGFIN--------NPKPKKPLTLSLHGWTGTGKNFVSKIIAENIY 120
L H K + + ++ + + K P+ L L G G GK + + IA ++
Sbjct: 77 LDEDHYGLKDVKERILEYLAVRQLTQGLDVRNKAPI-LVLVGPPGVGKTSLGRSIARSM- 134
Query: 121 EGGLNSDYVHLFVATLHFPHAS--NITLYKDQ--LQLWIRGNVSACARSIFIFDEMDKMH 176
N + + + + + Y +L + + D++DKM
Sbjct: 135 ----NRKFHRISLGGVRDEAEIRGHRRTYIGAMPGKLIHAMKQVGVINPVILLDQIDKMS 190
Query: 177 AGL----IDAIKPFLD--------YYDLVDGVSYQKAMFIFLSN 208
+ A+ LD + L K FI +N
Sbjct: 191 SDWRGDPASAMLEVLDPEQNNTFTDHYLDVPYDLSKVFFITTAN 234
>5C18-A nrPDB
Length = 785
Score = 31.1 bits (69), Expect = 0.77, Method: Composition-based stats.
Identities = 53/235 (22%), Positives = 90/235 (38%), Gaps = 42/235 (17%)
Query: 40 PRLYCLFA-----ECCGQ--KRSLSREALQKDLDDNLFG--QHLAK-KIILN------AV 83
P YC+ A C G+ KR E+L + D++ G + LA+ K ++ A+
Sbjct: 169 PSPYCIVAPDTVIHCEGEPIKREDEEESLNEVGYDDIGGCRKQLAQIKEMVELPLRHPAL 228
Query: 84 FGFINNPKPKKPLTLSLHGWTGTGKNFVSKIIAENIYEGGLNSDYVHLFVATLHFPHASN 143
F I K P + L+G GTGK +++ +A E G F ++ P +
Sbjct: 229 FKAIG---VKPPRGILLYGPPGTGKTLIARAVAN---ETG-------AFFFLINGPEIMS 275
Query: 144 ITLYKDQLQLWIR-GNVSACARSIFIFDEMD-------KMHAGL-IDAIKPFLDYYDLVD 194
+ + L A +I DE+D K H + + L L+D
Sbjct: 276 KLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKREKTHGEVERRIVSQLLT---LMD 332
Query: 195 GVSYQKAMFIFLSNAGAERITDVALDFWRSGKQREDIKLKDIEHALSVSVFNNKN 249
G+ + + + + I D AL + + DI + D L + + KN
Sbjct: 333 GLKQRAHVIVMAATNRPNSI-DPALRRFGRFDREVDIGIPDATGRLEILQIHTKN 386
Score = 28.0 bits (61), Expect = 6.2, Method: Composition-based stats.
Identities = 14/76 (18%), Positives = 25/76 (32%), Gaps = 9/76 (11%)
Query: 98 LSLHGWTGTGKNFVSKIIAENIYEGGLNSDYVHLFVATLHFPHASNITLYKDQLQLWIRG 157
+ +G G GK ++K IA ++ L A+ ++
Sbjct: 513 VLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVREIFD--------- 563
Query: 158 NVSACARSIFIFDEMD 173
A + FDE+D
Sbjct: 564 KARQAAPCVLFFDELD 579
>5M7N-A nrPDB
Length = 454
Score = 30.7 bits (68), Expect = 0.80, Method: Composition-based stats.
Identities = 34/149 (22%), Positives = 55/149 (36%), Gaps = 10/149 (6%)
Query: 45 LFAECCGQKRSLSREA--LQKDLDDNLFGQHLAKKIILNAVFGFINNPKPKKPLTLSLHG 102
L AE + L RE L+K D L + + + +N + I P + + G
Sbjct: 115 LVAERALETSKLKREVSDLRKRTGDQL--ELVGTSLAMNQLRQTIERVAPTNS-RIMITG 171
Query: 103 WTGTGKNFVSKIIAENIYEGGLNSDYVHLFVATLHFPHASNITLYKDQLQLWIR--GNVS 160
+G GK V++ I N +V + AT+ P I L+ ++ R G +
Sbjct: 172 PSGAGKELVARAIHAQSSRA--NGPFVTVNAATIT-PERMEIELFGTEMDGGERKVGALE 228
Query: 161 ACARSIFIFDEMDKMHAGLIDAIKPFLDY 189
I DE+ M + I L
Sbjct: 229 EAHGGILYLDEVADMPRETQNKILRVLVD 257
>5G4G-A nrPDB
Length = 721
Score = 30.7 bits (68), Expect = 0.84, Method: Composition-based stats.
Identities = 19/83 (22%), Positives = 33/83 (39%), Gaps = 9/83 (10%)
Query: 95 PLTLSLHGWTGTGKNFVSKIIAENIYEGGLNSDYVHLFVATLHFPHASNITLYKDQLQLW 154
P + L+G GTGK +++ +A E G N ++ + + + +Q
Sbjct: 219 PKGVILYGPPGTGKTLIARAVAN---ESGAN--FLSINGPEIMSKYYGQ----SEQKLRE 269
Query: 155 IRGNVSACARSIFIFDEMDKMHA 177
I A SI DE+D +
Sbjct: 270 IFSKAEETAPSIIFIDEIDSIAP 292
Score = 28.0 bits (61), Expect = 6.2, Method: Composition-based stats.
Identities = 9/26 (34%), Positives = 14/26 (53%), Gaps = 2/26 (7%)
Query: 91 KPKKPLTLSLHGWTGTGKNFVSKIIA 116
+P K L+G G GK ++K +A
Sbjct: 494 RPSK--GFLLYGPPGVGKTLLAKAVA 517
>5VC7-A nrPDB
Length = 564
Score = 30.7 bits (68), Expect = 0.87, Method: Composition-based stats.
Identities = 19/83 (22%), Positives = 33/83 (39%), Gaps = 9/83 (10%)
Query: 95 PLTLSLHGWTGTGKNFVSKIIAENIYEGGLNSDYVHLFVATLHFPHASNITLYKDQLQLW 154
P + L+G GTGK +++ +A E G N ++ + + + +Q
Sbjct: 43 PKGVILYGPPGTGKTLIARAVAN---ESGAN--FLSINGPEIMSKYYGQ----SEQKLRE 93
Query: 155 IRGNVSACARSIFIFDEMDKMHA 177
I A SI DE+D +
Sbjct: 94 IFSKAEETAPSIIFIDEIDSIAP 116
Score = 28.0 bits (61), Expect = 6.4, Method: Composition-based stats.
Identities = 9/26 (34%), Positives = 14/26 (53%), Gaps = 2/26 (7%)
Query: 91 KPKKPLTLSLHGWTGTGKNFVSKIIA 116
+P K L+G G GK ++K +A
Sbjct: 318 RPSK--GFLLYGPPGVGKTLLAKAVA 341
>4YPN-A nrPDB
Length = 293
Score = 30.3 bits (67), Expect = 1.1, Method: Composition-based stats.
Identities = 29/164 (17%), Positives = 53/164 (32%), Gaps = 30/164 (18%)
Query: 69 LFGQHLAKKIILNAVFGFIN--------NPKPKKPLTLSLHGWTGTGKNFVSKIIAENIY 120
L H K + + ++ + + K P+ L L G G GK + + IA ++
Sbjct: 110 LDEDHYGLKDVKERILEYLAVRQLTQGLDVRNKAPI-LVLVGPPGVGKTSLGRSIARSM- 167
Query: 121 EGGLNSDYVHLFVATLHFPHAS--NITLYKDQ--LQLWIRGNVSACARSIFIFDEMDKMH 176
N + + + + + Y +L + + DE+DKM
Sbjct: 168 ----NRKFHRISLGGVRDEAEIRGHRRTYIGAMPGKLIHAMKQVGVINPVILLDEIDKMS 223
Query: 177 AGL----IDAIKPFLD--------YYDLVDGVSYQKAMFIFLSN 208
+ A+ LD + L K FI +N
Sbjct: 224 SDWRGDPASAMLEVLDPEQNNTFTDHYLDVPYDLSKVFFITTAN 267
>1E94-E nrPDB
Length = 449
Score = 30.3 bits (67), Expect = 1.2, Method: Composition-based stats.
Identities = 11/71 (15%), Positives = 28/71 (39%), Gaps = 13/71 (18%)
Query: 59 EALQKDLDDNLFGQHLAKKIILNAVFGFINNPKPKK------------PLTLSLHGWTGT 106
E +++ L + + +V + N + ++ P + + G TG
Sbjct: 9 EMTPREIVSELDKHIIGQDNAKRSVAIALRN-RWRRMQLNEELRHEVTPKNILMIGPTGV 67
Query: 107 GKNFVSKIIAE 117
GK +++ +A+
Sbjct: 68 GKTEIARRLAK 78
>5W0T-A nrPDB
Length = 304
Score = 30.3 bits (67), Expect = 1.3, Method: Composition-based stats.
Identities = 13/52 (25%), Positives = 28/52 (53%), Gaps = 5/52 (9%)
Query: 88 NNPKPKKPLTLSLHGWTGTGKNFVSKIIAENIYEGGLNSDYVHLFVATLHFP 139
N+P + P + L+G G GK ++K +A+ E G N ++ + ++++
Sbjct: 70 NSPLLQAPSGVLLYGPPGCGKTMLAKALAK---ESGAN--FISIRMSSIMDK 116
>6EF0-L nrPDB
Length = 273
Score = 29.9 bits (66), Expect = 1.6, Method: Composition-based stats.
Identities = 11/27 (40%), Positives = 16/27 (59%)
Query: 93 KKPLTLSLHGWTGTGKNFVSKIIAENI 119
K P + L+G GTGK ++K +A I
Sbjct: 50 KPPKGVLLYGPPGTGKTLLAKAVAATI 76
>6MSK-B nrPDB
Length = 440
Score = 29.9 bits (66), Expect = 1.7, Method: Composition-based stats.
Identities = 11/48 (22%), Positives = 23/48 (47%), Gaps = 5/48 (10%)
Query: 93 KKPLTLSLHGWTGTGKNFVSKIIAENIYEGGLNSDYVHLFVATLHFPH 140
K P + L+G GTGK ++K +A ++ ++ + + L +
Sbjct: 217 KPPKGVILYGPPGTGKTLLAKAVANQT-----SATFLRVVGSELIQKY 259
>5WVI-L nrPDB
Length = 437
Score = 29.9 bits (66), Expect = 1.7, Method: Composition-based stats.
Identities = 11/27 (40%), Positives = 16/27 (59%)
Query: 93 KKPLTLSLHGWTGTGKNFVSKIIAENI 119
K P + L+G GTGK ++K +A I
Sbjct: 213 KPPKGVLLYGPPGTGKTLLAKAVAATI 239
>5VHO-B nrPDB
Length = 267
Score = 29.9 bits (66), Expect = 1.7, Method: Composition-based stats.
Identities = 11/48 (22%), Positives = 23/48 (47%), Gaps = 5/48 (10%)
Query: 93 KKPLTLSLHGWTGTGKNFVSKIIAENIYEGGLNSDYVHLFVATLHFPH 140
K P + L+G GTGK ++K +A ++ ++ + + L +
Sbjct: 51 KPPKGVILYGPPGTGKTLLAKAVANQT-----SATFLRVVGSELIQKY 93
>6FVU-L nrPDB
Length = 388
Score = 29.6 bits (65), Expect = 1.8, Method: Composition-based stats.
Identities = 11/27 (40%), Positives = 16/27 (59%)
Query: 93 KKPLTLSLHGWTGTGKNFVSKIIAENI 119
K P + L+G GTGK ++K +A I
Sbjct: 165 KPPKGVLLYGPPGTGKTLLAKAVAATI 191
>5L3S-B nrPDB
Length = 296
Score = 29.6 bits (65), Expect = 1.8, Method: Composition-based stats.
Identities = 33/151 (21%), Positives = 55/151 (36%), Gaps = 32/151 (21%)
Query: 59 EALQKDLDDNLFGQHLAKK-----IILNAVFGFIN---------------NPKPKKPLTL 98
E + +DL +NL G+ ++++ I++N + I KKP +
Sbjct: 45 EKILEDLKNNLIGKKVSRREEVEEIVINTLKKSITEILTKNQKTDLIEKIRSSGKKPFVI 104
Query: 99 SLHGWTGTGKNFVSKIIAENIYEGGLN-----SDYVHLFVATLHFPHASNITLYKDQLQL 153
G G GK + + + L+ SD HAS + + QL
Sbjct: 105 IFFGVNGVGKTTTIAKVVNMLKKNNLSTIIAASDTFRAAAQEQLAYHASKLEV-----QL 159
Query: 154 WIRGNVSACARSIFIFDEMDKMHAGLIDAIK 184
IRG A S+ FD + + ID +
Sbjct: 160 -IRGKYGADPASV-AFDAISFAKSRNIDVVL 188
>2CE7-A nrPDB
Length = 476
Score = 29.6 bits (65), Expect = 1.8, Method: Composition-based stats.
Identities = 15/49 (30%), Positives = 23/49 (46%), Gaps = 3/49 (6%)
Query: 88 NNPKPKKPLTLSLHGWTGTGKNFVSKIIAENI---YEGGLNSDYVHLFV 133
N + P + L G GTGK +++ +A + SD+V LFV
Sbjct: 42 NRIGARMPKGILLVGPPGTGKTLLARAVAGEANVPFFHISGSDFVELFV 90
>3UPU-A nrPDB
Length = 459
Score = 29.6 bits (65), Expect = 1.9, Method: Composition-based stats.
Identities = 13/49 (26%), Positives = 21/49 (42%), Gaps = 4/49 (8%)
Query: 75 AKKIILNAVFGFINNPKPKKPLTLSLHGWTGTGKNFVSKIIAENIYEGG 123
+K N V I K ++++G GTG ++K I E + G
Sbjct: 29 GQKNAFNIVMKAIKEKKHH----VTINGPAGTGATTLTKFIIEALISTG 73
>5VHF-B nrPDB
Length = 340
Score = 29.6 bits (65), Expect = 1.9, Method: Composition-based stats.
Identities = 11/48 (22%), Positives = 23/48 (47%), Gaps = 5/48 (10%)
Query: 93 KKPLTLSLHGWTGTGKNFVSKIIAENIYEGGLNSDYVHLFVATLHFPH 140
K P + L+G GTGK ++K +A ++ ++ + + L +
Sbjct: 125 KPPKGVILYGPPGTGKTLLAKAVANQT-----SATFLRVVGSELIQKY 167
>5VFP-B nrPDB
Length = 389
Score = 29.6 bits (65), Expect = 1.9, Method: Composition-based stats.
Identities = 11/48 (22%), Positives = 23/48 (47%), Gaps = 5/48 (10%)
Query: 93 KKPLTLSLHGWTGTGKNFVSKIIAENIYEGGLNSDYVHLFVATLHFPH 140
K P + L+G GTGK ++K +A ++ ++ + + L +
Sbjct: 166 KPPKGVILYGPPGTGKTLLAKAVANQT-----SATFLRVVGSELIQKY 208
>5VHN-D nrPDB
Length = 262
Score = 29.6 bits (65), Expect = 2.0, Method: Composition-based stats.
Identities = 16/89 (17%), Positives = 35/89 (39%), Gaps = 11/89 (12%)
Query: 95 PLTLSLHGWTGTGKNFVSKIIAENIYEGGLNSDYVHLFVATLHFPH-ASNITLYKDQLQL 153
P + ++G G GK ++K +A + + ++ + + + + +D +L
Sbjct: 55 PRGVLMYGPPGCGKTMLAKAVAHHT-----TAAFIRVVGSEFVQKYLGEGPRMVRDVFRL 109
Query: 154 WIRGNVSACARSIFIFDEMDKMHAGLIDA 182
A +I DE+D + DA
Sbjct: 110 -----AKENAPAIIFIDEIDAIATKRFDA 133
>3K1J-A nrPDB
Length = 604
Score = 29.6 bits (65), Expect = 2.1, Method: Composition-based stats.
Identities = 13/66 (19%), Positives = 28/66 (42%), Gaps = 5/66 (7%)
Query: 64 DLDDNLFGQHLAKKIILNAVFGFINNPKPKKPLTLSLHGWTGTGKNFVSKIIAENIYEGG 123
++ + L Q + ++ + + N + + L G GTGK+ + + +AE +
Sbjct: 34 EVPEKLIDQVIGQEHAVEVIKTAANQKR-----HVLLIGEPGTGKSMLGQAMAELLPTET 88
Query: 124 LNSDYV 129
L V
Sbjct: 89 LEDILV 94
>4OI0-A nrPDB
Length = 431
Score = 29.6 bits (65), Expect = 2.1, Method: Composition-based stats.
Identities = 17/48 (35%), Positives = 21/48 (43%), Gaps = 1/48 (2%)
Query: 88 NNPKPKKPLTLSLHGWTGTGKNFVSKIIAENIYEGGLNSDYVHLFVAT 135
N+ K K P L L G T GK VS+I+ G +V L V
Sbjct: 111 NSNKAKGP-RLLLVGPTDVGKTTVSRILCNYSVRQGRTPIFVELDVGQ 157
>4N3O-A nrPDB
Length = 342
Score = 29.6 bits (65), Expect = 2.1, Method: Composition-based stats.
Identities = 25/108 (23%), Positives = 40/108 (37%), Gaps = 15/108 (13%)
Query: 14 APSVVQAVEPISLGLALAGV--------LTGYIYPRLYCLFAECCGQKRSLSREALQK-- 63
A ++ P+ LGLA G TGY+ L+ C KR +
Sbjct: 3 AMKTIRTQTPLRLGLAGGGTDINLYCDKYTGYVLNATISLYIHCTLIKREDGKIIFDSPD 62
Query: 64 -----DLDDNLFGQHLAKKIILNAVFGFINNPKPKKPLTLSLHGWTGT 106
+ + F + K I +++ I KKPL+ SLH ++
Sbjct: 63 TNSYCEYESKEFLGNDGKLDIFKSIYNRIVKDFTKKPLSFSLHTYSDV 110
>6MCK-A nrPDB
Length = 606
Score = 29.6 bits (65), Expect = 2.1, Method: Composition-based stats.
Identities = 38/177 (21%), Positives = 65/177 (36%), Gaps = 26/177 (14%)
Query: 82 AVFGFINNPKPKKPLTLSLHGWTGTGKNFVSKIIAENIYEGGLNSDYVHLFVATLHFPHA 141
A+F I K P + L+G GTGK +++ +A E G F ++ P
Sbjct: 20 ALFKAIG---VKPPRGILLYGPPGTGKTLIARAVAN---ETG-------AFFFLINGPEI 66
Query: 142 SNITLYKDQLQLWIR-GNVSACARSIFIFDEMD-------KMHAGL-IDAIKPFLDYYDL 192
+ + + L A +I DE+D K H + + L L
Sbjct: 67 MSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKREKTHGEVERRIVSQLLT---L 123
Query: 193 VDGVSYQKAMFIFLSNAGAERITDVALDFWRSGKQREDIKLKDIEHALSVSVFNNKN 249
+DG+ + + + + I D AL + + DI + D L + + KN
Sbjct: 124 MDGLKQRAHVIVMAATNRPNSI-DPALRRFGRFDREVDIGIPDATGRLEILQIHTKN 179
Score = 28.0 bits (61), Expect = 6.0, Method: Composition-based stats.
Identities = 14/76 (18%), Positives = 25/76 (32%), Gaps = 9/76 (11%)
Query: 98 LSLHGWTGTGKNFVSKIIAENIYEGGLNSDYVHLFVATLHFPHASNITLYKDQLQLWIRG 157
+ +G G GK ++K IA ++ L A+ ++
Sbjct: 306 VLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVREIFD--------- 356
Query: 158 NVSACARSIFIFDEMD 173
A + FDE+D
Sbjct: 357 KARQAAPCVLFFDELD 372
>4ZPX-A nrPDB
Length = 413
Score = 29.6 bits (65), Expect = 2.1, Method: Composition-based stats.
Identities = 13/66 (19%), Positives = 28/66 (42%), Gaps = 5/66 (7%)
Query: 64 DLDDNLFGQHLAKKIILNAVFGFINNPKPKKPLTLSLHGWTGTGKNFVSKIIAENIYEGG 123
++ + L Q + ++ + + N + + L G GTGK+ + + +AE +
Sbjct: 34 EVPEKLIDQVIGQEHAVEVIKTAANQKR-----HVLLIGEPGTGKSMLGQAMAELLPTET 88
Query: 124 LNSDYV 129
L V
Sbjct: 89 LEDILV 94
>5T0C-AD nrPDB
Length = 418
Score = 29.6 bits (65), Expect = 2.3, Method: Composition-based stats.
Identities = 16/89 (17%), Positives = 35/89 (39%), Gaps = 11/89 (12%)
Query: 95 PLTLSLHGWTGTGKNFVSKIIAENIYEGGLNSDYVHLFVATLHFPH-ASNITLYKDQLQL 153
P + ++G G GK ++K +A + + ++ + + + + +D +L
Sbjct: 199 PRGVLMYGPPGCGKTMLAKAVAHHT-----TAAFIRVVGSEFVQKYLGEGPRMVRDVFRL 253
Query: 154 WIRGNVSACARSIFIFDEMDKMHAGLIDA 182
A +I DE+D + DA
Sbjct: 254 -----AKENAPAIIFIDEIDAIATKRFDA 277
>4NE4-A nrPDB
Length = 286
Score = 29.2 bits (64), Expect = 2.6, Method: Composition-based stats.
Identities = 14/55 (25%), Positives = 23/55 (41%), Gaps = 5/55 (9%)
Query: 167 FIFDEMDKMHAGLIDAIKPFLDYYDLVDGVSYQKAMFIFLSNAGAERITDVALDF 221
I +E+ K H + + +KP + DL + G E+ VA+DF
Sbjct: 229 IIREEVLKKHPNIEELLKPVFEKLDLATLQDLNARV-----QVGGEQAKTVAMDF 278
>6EPC-H nrPDB
Length = 433
Score = 29.2 bits (64), Expect = 2.7, Method: Composition-based stats.
Identities = 30/170 (17%), Positives = 64/170 (37%), Gaps = 34/170 (20%)
Query: 95 PLTLSLHGWTGTGKNFVSKIIAENIYEGGLNSDYVHLFVATLHFPHASNITLYKDQLQLW 154
P + L G GTGK ++ +A ++ ++ + + L + + ++
Sbjct: 209 PKGVLLFGPPGTGKTLCARAVANRT-----DACFIPVIGSELVQKYVG------EGARMV 257
Query: 155 IR--GNVSACARSIFIFDEMDKMHAGLID--------AIKPFLDYYDLVDGVSYQKAMFI 204
+ FDE+D + D + L+ + +DG + + +
Sbjct: 258 RELFEMARTKKACLIFFDEIDAIGGARFDDGAGGDNEVQRTMLELINQLDGFDPRGNIKV 317
Query: 205 FLSNAGAERITDVALDFWRSGK--QREDIKLKDIE--------HALSVSV 244
++ + + D AL R G+ ++ + L D+E HA S+SV
Sbjct: 318 LMATNRPDTL-DPAL--MRPGRLDRKIEFSLPDLEGRTHIFKIHARSMSV 364
>3TQC-A nrPDB
Length = 321
Score = 29.2 bits (64), Expect = 2.8, Method: Composition-based stats.
Identities = 11/43 (25%), Positives = 23/43 (53%)
Query: 73 HLAKKIILNAVFGFINNPKPKKPLTLSLHGWTGTGKNFVSKII 115
A++ + A + F+ P+PK P + + G GK+ S+++
Sbjct: 70 VTARQTLQQATYQFLGKPEPKVPYIIGIAGSVAVGKSTTSRVL 112
>1IY1-A nrPDB
Length = 254
Score = 29.2 bits (64), Expect = 2.8, Method: Composition-based stats.
Identities = 15/60 (25%), Positives = 26/60 (43%), Gaps = 9/60 (15%)
Query: 83 VFGFINNPK------PKKPLTLSLHGWTGTGKNFVSKIIAENI---YEGGLNSDYVHLFV 133
+ F+ NP + P + L G G GK +++ +A + SD+V +FV
Sbjct: 31 IVEFLKNPSRFHEMGARIPKGVLLVGPPGVGKTHLARAVAGEARVPFITASGSDFVEMFV 90
>3RTY-A nrPDB
Length = 339
Score = 28.8 bits (63), Expect = 3.1, Method: Composition-based stats.
Identities = 14/28 (50%), Positives = 18/28 (64%)
Query: 278 KMCIRVEMQSRGYEIDEDIVSRVAEEMT 305
K+ I E QSR I EDIV R+AE ++
Sbjct: 277 KLKISEEAQSRNTRIKEDIVKRLAETVS 304
>4XHZ-A nrPDB
Length = 338
Score = 28.8 bits (63), Expect = 3.1, Method: Composition-based stats.
Identities = 14/69 (20%), Positives = 31/69 (44%), Gaps = 1/69 (1%)
Query: 100 LHGWTGTGKNFVSKIIAENIYEGGLNSDYVHLFVATLHFPHASNIT-LYKDQLQLWIRGN 158
+ ++ + AE+ GL + V V + FP+ ++I + +D ++ R N
Sbjct: 120 MVAPDAVKGTPITTVYAEDADPPGLPASRVRYRVDDVQFPYPASIFEVEEDSGRVITRVN 179
Query: 159 VSACARSIF 167
++ +IF
Sbjct: 180 LNEEPTTIF 188
>4E22-A nrPDB
Length = 252
Score = 28.8 bits (63), Expect = 3.2, Method: Composition-based stats.
Identities = 14/59 (23%), Positives = 28/59 (47%)
Query: 102 GWTGTGKNFVSKIIAENIYEGGLNSDYVHLFVATLHFPHASNITLYKDQLQLWIRGNVS 160
G +G GK + K +AE++ L+S ++ +A H +I+ + + L +V
Sbjct: 34 GPSGAGKGTLCKALAESLNWRLLDSGAIYRVLALAALHHQVDISTEEALVPLAAHLDVR 92
>2DHR-A nrPDB
Length = 499
Score = 28.8 bits (63), Expect = 3.2, Method: Composition-based stats.
Identities = 15/60 (25%), Positives = 26/60 (43%), Gaps = 9/60 (15%)
Query: 83 VFGFINNPK------PKKPLTLSLHGWTGTGKNFVSKIIAENI---YEGGLNSDYVHLFV 133
+ F+ NP + P + L G G GK +++ +A + SD+V +FV
Sbjct: 46 IVEFLKNPSRFHEMGARIPKGVLLVGPPGVGKTHLARAVAGEARVPFITASGSDFVEMFV 105
>6AP1-A nrPDB
Length = 519
Score = 28.8 bits (63), Expect = 3.8, Method: Composition-based stats.
Identities = 13/47 (27%), Positives = 27/47 (57%), Gaps = 4/47 (8%)
Query: 93 KKPLT-LSLHGWTGTGKNFVSKII---AENIYEGGLNSDYVHLFVAT 135
+KP + + L+G GTGK++++K + A + + +SD V ++
Sbjct: 64 RKPTSGILLYGPPGTGKSYLAKAVATEANSTFFSVSSSDLVSKWMGE 110
>3EIH-A nrPDB
Length = 340
Score = 28.8 bits (63), Expect = 3.8, Method: Composition-based stats.
Identities = 13/47 (27%), Positives = 27/47 (57%), Gaps = 4/47 (8%)
Query: 93 KKPLT-LSLHGWTGTGKNFVSKII---AENIYEGGLNSDYVHLFVAT 135
+KP + + L+G GTGK++++K + A + + +SD V ++
Sbjct: 66 RKPTSGILLYGPPGTGKSYLAKAVATEANSTFFSVSSSDLVSKWMGE 112
>4UPB-C nrPDB
Length = 500
Score = 28.4 bits (62), Expect = 4.0, Method: Composition-based stats.
Identities = 23/146 (15%), Positives = 53/146 (36%), Gaps = 21/146 (14%)
Query: 61 LQKDLDDNLFGQ-HLAKKIILNAVFGFINNPKPKKPLTLSLHGWTGTGKNFVSKIIAENI 119
L L+ L+ + H + +L A+ G ++ L G G K+ +++ +
Sbjct: 16 LSSSLEKGLYERSHAIRLCLLAALSGE----------SVFLLGPPGIAKSLIARRLKFAF 65
Query: 120 YEGGLNSDYVHLFVATLHFPHAS----NITLYKDQLQLWIRGNVSACARSIFIF-DEMDK 174
N+ + P +I KD+ + + R + +F DE+ K
Sbjct: 66 ----QNARAFEYLMTRFSTPEEVFGPLSIQALKDEGR-YERLTSGYLPEAEIVFLDEIWK 120
Query: 175 MHAGLIDAIKPFLDYYDLVDGVSYQK 200
+++ + ++ +G +K
Sbjct: 121 AGPAILNTLLTAINERQFRNGAHVEK 146
>5XMK-A nrPDB
Length = 437
Score = 28.4 bits (62), Expect = 4.1, Method: Composition-based stats.
Identities = 13/47 (27%), Positives = 27/47 (57%), Gaps = 4/47 (8%)
Query: 93 KKPLT-LSLHGWTGTGKNFVSKII---AENIYEGGLNSDYVHLFVAT 135
+KP + + L+G GTGK++++K + A + + +SD V ++
Sbjct: 163 RKPTSGILLYGPPGTGKSYLAKAVATEANSTFFSVSSSDLVSKWMGE 209
>1SXJ-E nrPDB
Length = 354
Score = 28.4 bits (62), Expect = 4.2, Method: Composition-based stats.
Identities = 17/56 (30%), Positives = 24/56 (42%), Gaps = 4/56 (7%)
Query: 91 KPKKPLTLSLHGWTGTGKNFVSKIIAENIYEGGLNSDYVHLFVATLHFPHASNITL 146
+P+ L L+G GTGK + E+I+ G L + F ASN L
Sbjct: 32 QPRDLPHLLLYGPNGTGKKTRCMALLESIFGPG----VYRLKIDVRQFVTASNRKL 83
>3GEC-A nrPDB
Length = 312
Score = 28.4 bits (62), Expect = 4.4, Method: Composition-based stats.
Identities = 14/25 (56%), Positives = 16/25 (64%)
Query: 278 KMCIRVEMQSRGYEIDEDIVSRVAE 302
K+ I E QSR I EDIV R+AE
Sbjct: 286 KLKISEEAQSRNTRIKEDIVKRLAE 310
>6CHS-H nrPDB
Length = 819
Score = 28.4 bits (62), Expect = 4.6, Method: Composition-based stats.
Identities = 9/24 (37%), Positives = 15/24 (62%)
Query: 93 KKPLTLSLHGWTGTGKNFVSKIIA 116
K P + L+G GTGK +++ +A
Sbjct: 252 KPPRGVLLYGPPGTGKTLMARAVA 275
>5KJ4-A nrPDB
Length = 234
Score = 28.4 bits (62), Expect = 4.7, Method: Composition-based stats.
Identities = 13/69 (18%), Positives = 31/69 (44%), Gaps = 1/69 (1%)
Query: 100 LHGWTGTGKNFVSKIIAENIYEGGLNSDYVHLFVATLHFPHASNIT-LYKDQLQLWIRGN 158
+ ++ + AE+ G+ + V V + FP+ ++I + +D ++ R N
Sbjct: 16 MVAPDAVKGTPITTVYAEDADPPGMPASRVRYRVDDVQFPYPASIFDVEEDSGRVVTRVN 75
Query: 159 VSACARSIF 167
++ +IF
Sbjct: 76 LNEEPTTIF 84
>1XWI-A nrPDB
Length = 322
Score = 28.4 bits (62), Expect = 4.7, Method: Composition-based stats.
Identities = 20/79 (25%), Positives = 33/79 (41%), Gaps = 10/79 (12%)
Query: 98 LSLHGWTGTGKNFVSKIIAENIYEGGLNSDYVHLFVATLHFPH-ASNITLYKDQLQLWIR 156
+ L G GTGK++++K +A NS + + + L + L K+ QL
Sbjct: 48 ILLFGPPGTGKSYLAKAVATE----ANNSTFFSISSSDLVSKWLGESEKLVKNLFQL--- 100
Query: 157 GNVSACARSIFIFDEMDKM 175
SI DE+D +
Sbjct: 101 --ARENKPSIIFIDEIDSL 117
>2Z0M-A nrPDB
Length = 337
Score = 28.4 bits (62), Expect = 4.9, Method: Composition-based stats.
Identities = 23/89 (25%), Positives = 37/89 (41%), Gaps = 7/89 (7%)
Query: 151 LQLWIRGNVSACARSIFIFDEMDKMHAGLIDAIKPFLDYYDLVDGVSYQKAMFIFLSNAG 210
L LW +G + + I I DE D M F+D ++ + + + S
Sbjct: 117 LDLWSKGVIDLSSFEIVIIDEADLMFE------MGFIDDIKIILAQTSNRKITGLFSATI 170
Query: 211 AERITDVALDFWRSGKQRED-IKLKDIEH 238
E I V DF + ++ E I L ++EH
Sbjct: 171 PEEIRKVVKDFITNYEEIEACIGLANVEH 199
>3ZW6-A nrPDB
Length = 293
Score = 28.4 bits (62), Expect = 5.0, Method: Composition-based stats.
Identities = 24/103 (23%), Positives = 47/103 (45%), Gaps = 10/103 (9%)
Query: 64 DLDDNLFGQHLA----KKIILNAVFGFINNPKPKKPLTLSLHGWTGTGKNFVSKIIAENI 119
+LD+ L G ++A K++++ F+ P K PL L + G G GK+F +++ +
Sbjct: 1 NLDNKLDGFYIAPAFMDKLVVHITKNFLKLPNIKVPLILGIWGGKGQGKSFQCELVFRKM 60
Query: 120 YEGGLNSDYV---HLFVATLHFPHASNITLYKDQLQLWIRGNV 159
G+N + L P Y++ ++ +GN+
Sbjct: 61 ---GINPIMMSAGELESGNAGEPAKLIRQRYREAAEIIRKGNM 100
>2ZAO-A nrPDB
Length = 444
Score = 28.4 bits (62), Expect = 5.0, Method: Composition-based stats.
Identities = 20/79 (25%), Positives = 33/79 (41%), Gaps = 10/79 (12%)
Query: 98 LSLHGWTGTGKNFVSKIIAENIYEGGLNSDYVHLFVATLHFPH-ASNITLYKDQLQLWIR 156
+ L G GTGK++++K +A NS + + + L + L K+ QL
Sbjct: 170 ILLFGPPGTGKSYLAKAVATE----ANNSTFFSISSSDLVSKWLGESEKLVKNLFQL--- 222
Query: 157 GNVSACARSIFIFDEMDKM 175
SI DE+D +
Sbjct: 223 --ARENKPSIIFIDEIDSL 239
>5E7P-A nrPDB
Length = 745
Score = 28.4 bits (62), Expect = 5.1, Method: Composition-based stats.
Identities = 9/24 (37%), Positives = 14/24 (58%)
Query: 95 PLTLSLHGWTGTGKNFVSKIIAEN 118
P + L+G G GK FV + +A +
Sbjct: 519 PRGVLLYGPPGCGKTFVVRALASS 542
>6C13-A nrPDB
Length = 660
Score = 28.0 bits (61), Expect = 5.6, Method: Composition-based stats.
Identities = 13/69 (18%), Positives = 31/69 (44%), Gaps = 1/69 (1%)
Query: 100 LHGWTGTGKNFVSKIIAENIYEGGLNSDYVHLFVATLHFPHASNIT-LYKDQLQLWIRGN 158
+ ++ + AE+ G+ + V V + FP+ ++I + +D ++ R N
Sbjct: 123 MVAPDAVKGTPITTVYAEDADPPGMPASRVRYRVDDVQFPYPASIFDVEEDSGRVVTRVN 182
Query: 159 VSACARSIF 167
++ +IF
Sbjct: 183 LNEEPTTIF 191
>4LGM-A nrPDB
Length = 295
Score = 28.0 bits (61), Expect = 5.6, Method: Composition-based stats.
Identities = 11/45 (24%), Positives = 21/45 (46%), Gaps = 5/45 (11%)
Query: 95 PLTLSLHGWTGTGKNFVSKIIAENIYEGGLNSDYVHLFVATLHFP 139
P + L+G G GK ++ +A I +S ++ L A++
Sbjct: 57 PRGILLYGPPGCGKTMIAAAVANEI-----DSIFMQLDAASVMSK 96
>1LV7-A nrPDB
Length = 257
Score = 28.0 bits (61), Expect = 5.6, Method: Composition-based stats.
Identities = 15/44 (34%), Positives = 22/44 (50%), Gaps = 3/44 (6%)
Query: 93 KKPLTLSLHGWTGTGKNFVSKIIAENI---YEGGLNSDYVHLFV 133
K P + + G GTGK ++K IA + SD+V +FV
Sbjct: 43 KIPKGVLMVGPPGTGKTLLAKAIAGEAKVPFFTISGSDFVEMFV 86
>5VQ9-D nrPDB
Length = 432
Score = 28.0 bits (61), Expect = 5.6, Method: Composition-based stats.
Identities = 9/22 (40%), Positives = 14/22 (63%)
Query: 98 LSLHGWTGTGKNFVSKIIAENI 119
+ LHG GTGK + K +A+ +
Sbjct: 175 VLLHGPPGTGKTSLCKALAQKL 196
>3CF0-A nrPDB
Length = 301
Score = 28.0 bits (61), Expect = 5.9, Method: Composition-based stats.
Identities = 14/76 (18%), Positives = 25/76 (32%), Gaps = 9/76 (11%)
Query: 98 LSLHGWTGTGKNFVSKIIAENIYEGGLNSDYVHLFVATLHFPHASNITLYKDQLQLWIRG 157
+ +G G GK ++K IA ++ L A+ ++
Sbjct: 52 VLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVREIFD--------- 102
Query: 158 NVSACARSIFIFDEMD 173
A + FDE+D
Sbjct: 103 KARQAAPCVLFFDELD 118
>5FM7-A nrPDB
Length = 464
Score = 28.0 bits (61), Expect = 5.9, Method: Composition-based stats.
Identities = 11/36 (30%), Positives = 20/36 (55%)
Query: 267 VPFLPLEYKHLKMCIRVEMQSRGYEIDEDIVSRVAE 302
+P P E ++ +R+ Q+ G ++ + V RVAE
Sbjct: 364 IPTHPYEPDEIRRIVRIRAQTEGVQLTDAAVDRVAE 399
>2R65-A nrPDB
Length = 268
Score = 28.0 bits (61), Expect = 6.3, Method: Composition-based stats.
Identities = 31/142 (21%), Positives = 50/142 (35%), Gaps = 30/142 (21%)
Query: 93 KKPLTLSLHGWTGTGKNFVSKIIAENI---YEGGLNSDYVHLFVATLHFPHASNITLYKD 149
K P + L G GTGK ++K +A + S ++ +FV + L++
Sbjct: 42 KIPKGVLLVGPPGTGKTLLAKAVAGEAHVPFFSMGGSSFIEMFVG---LGASRVRDLFE- 97
Query: 150 QLQLWIRGNVSACARSIFIFDEMD-----KMHAGLID-------AIKPFLDYYDLVDGVS 197
A SI DE+D + G++ + L +DG
Sbjct: 98 --------TAKKQAPSIIFIDEIDAIGKSRAAGGVVSGNDEREQTLNQLLAE---MDGFG 146
Query: 198 YQKAMFIFLSNAGAERITDVAL 219
+ A I L+ I D AL
Sbjct: 147 SENAPVIVLAATNRPEILDPAL 168
>3A8T-A nrPDB
Length = 339
Score = 28.0 bits (61), Expect = 6.4, Method: Composition-based stats.
Identities = 14/46 (30%), Positives = 25/46 (54%)
Query: 87 INNPKPKKPLTLSLHGWTGTGKNFVSKIIAENIYEGGLNSDYVHLF 132
+ + +K L L G TGTGK+ +S +A + +NSD + ++
Sbjct: 32 LRRQRHRKEKLLVLMGATGTGKSRLSIDLAAHFPLEVINSDKMQVY 77
>4DEF-A nrPDB
Length = 349
Score = 27.6 bits (60), Expect = 7.9, Method: Composition-based stats.
Identities = 9/43 (20%), Positives = 21/43 (48%)
Query: 90 PKPKKPLTLSLHGWTGTGKNFVSKIIAENIYEGGLNSDYVHLF 132
P KP HG +G+ K+ + + + + + +++D + F
Sbjct: 241 PADAKPFDFVFHGGSGSLKSEIEEALRYGVVKMNVDTDTQYAF 283
>5E6U-A nrPDB
Length = 795
Score = 27.6 bits (60), Expect = 8.4, Method: Composition-based stats.
Identities = 34/132 (25%), Positives = 50/132 (37%), Gaps = 20/132 (15%)
Query: 111 VSKIIAENIYEGGLNSDYVHLFVATLHFPHASNITLYKDQLQLWIRGNVSACARSIFIFD 170
+S+ +N Y GL +LF L P Q I+GNV +F+FD
Sbjct: 90 LSRTCDQNTYLSGL----CYLFRQNLQGPMLQGR----PGFQECIKGNVDL----VFLFD 137
Query: 171 EMDKMHAGLIDAIKPFL-DYYDLVDGVSYQKAMFIFLSNAGAERITDVALDFWRSGKQRE 229
+ I F+ D + SYQ A F ++ E DF K ++
Sbjct: 138 GSMSLQPDEFQKILDFMKDVMKKLSNTSYQFAAVQFSTSYKTE------FDFSDYVKWKD 191
Query: 230 -DIKLKDIEHAL 240
D LK ++H L
Sbjct: 192 PDALLKHVKHML 203
>6MAT-A nrPDB
Length = 813
Score = 27.6 bits (60), Expect = 8.6, Method: Composition-based stats.
Identities = 26/110 (23%), Positives = 44/110 (40%), Gaps = 19/110 (17%)
Query: 76 KKIILNAVFGFINNPK------PKKPLTLSLHGWTGTGKNFVSKIIAENIYEGGLNSDYV 129
+K + ++ G I NP+ K + L G G GK V+K +A ++++
Sbjct: 510 RKKLEMSIIGPIKNPELFTRVGIKPAAGILLWGPPGCGKTLVAKAVANE-----SKANFI 564
Query: 130 HLFVATLHFPHA--SNITLYKDQLQLWIRGNVSACARSIFIFDEMDKMHA 177
+ L + S + QL+ R SA I FD+MD +
Sbjct: 565 SIKGPELLNKYVGESERAVR----QLFSRAKSSAP--CILFFDQMDALVP 608
Score = 27.2 bits (59), Expect = 9.1, Method: Composition-based stats.
Identities = 9/22 (40%), Positives = 14/22 (63%)
Query: 98 LSLHGWTGTGKNFVSKIIAENI 119
+ LHG +G GK ++ IA +I
Sbjct: 239 VLLHGPSGCGKTTLAHAIAGSI 260
>5WDE-A nrPDB
Length = 330
Score = 27.6 bits (60), Expect = 8.8, Method: Composition-based stats.
Identities = 14/73 (19%), Positives = 30/73 (41%), Gaps = 3/73 (4%)
Query: 67 DNLFGQHLAKKIILNAVFGFINNPKPKKPLTLSLHGWTGTGKNFVSKIIAENIYEGGLNS 126
D +F +++ + V + + + + +G TG GK + + AEN G+N
Sbjct: 53 DKVFSPQASQQDVFQEVQALVTSCIDGFNVCIFAYGQTGAGKTYTMEGTAEN---PGINQ 109
Query: 127 DYVHLFVATLHFP 139
+ L + +
Sbjct: 110 RALQLLFSEVQEK 122
>5Z3Q-B nrPDB
Length = 214
Score = 27.2 bits (59), Expect = 9.2, Method: Composition-based stats.
Identities = 14/35 (40%), Positives = 20/35 (57%)
Query: 94 KPLTLSLHGWTGTGKNFVSKIIAENIYEGGLNSDY 128
+P+ L +HG GTGK+ + +IA I E S Y
Sbjct: 6 EPVCLLVHGSPGTGKSVATNLIARAIAEAENTSTY 40
>4IV8-A nrPDB
Length = 284
Score = 27.2 bits (59), Expect = 9.2, Method: Composition-based stats.
Identities = 30/115 (26%), Positives = 49/115 (42%), Gaps = 19/115 (16%)
Query: 127 DYVHLFVATLHFPHASNITLYKDQLQLWIRGN-----VSACARSIFIFDEMDKMHAGLID 181
D ++ A LH P+A L++ + W++ N CA I +DE K +
Sbjct: 139 DMIYSRDAILHLPYADKKKLFEKCYK-WLKPNGILLITDYCADKIENWDEEFKAYINKRK 197
Query: 182 -AIKPFLDYYDLVDGVSYQKAMFIFLSNAGAERITDVALDFWRSGKQREDIKLKD 235
+ P DY DL+ ++Q N A+ I+D +W Q E KL++
Sbjct: 198 YTLIPIQDYGDLIKSCNFQ--------NVQAKDISD----YWLELLQMELNKLEE 240
>5VHP-E nrPDB
Length = 262
Score = 27.2 bits (59), Expect = 9.5, Method: Composition-based stats.
Identities = 8/25 (32%), Positives = 14/25 (56%)
Query: 95 PLTLSLHGWTGTGKNFVSKIIAENI 119
P L+G GTGK +++ +A +
Sbjct: 40 PKGCLLYGPPGTGKTLLARAVASQL 64
>2QBY-B nrPDB
Length = 384
Score = 27.2 bits (59), Expect = 9.7, Method: Composition-based stats.
Identities = 16/51 (31%), Positives = 22/51 (43%), Gaps = 3/51 (5%)
Query: 77 KIILNAVFGFINNPKPKKPLTLSLHGWTGTGKNFVSKIIAENIYEGGLNSD 127
+ A+ F+ N + + G TGTGK FVSK I I E +
Sbjct: 30 RDAAIAIRYFVKN---EVKFSNLFLGLTGTGKTFVSKYIFNEIEEVKKEDE 77
>5BQ5-A nrPDB
Length = 189
Score = 27.2 bits (59), Expect = 9.9, Method: Composition-based stats.
Identities = 23/118 (19%), Positives = 38/118 (32%), Gaps = 18/118 (15%)
Query: 94 KPLTLSLHGWTGTGKNFVSKIIAENIYEGGLNSDYVHLFVATLHFPHASNITLYKDQ-LQ 152
+ + G G GK ++ I G + ++ T H N DQ +
Sbjct: 38 RKENILFLGPPGIGKTHLAISIGMEAIARGYKTYFI-----TAHD--LVNQLRRADQEGK 90
Query: 153 LWIRGNVSACARSIFIFDEMD--KMHAGLIDAIKPFLDYYDLVDGVSYQKAMFIFLSN 208
L + V ++ I DEM K+ + + Y+ A I SN
Sbjct: 91 LEKKLRVFVKP-TVLIIDEMGYLKLDPNSAHYLFQVI-------ARRYEHAPIILTSN 140
>6MSD-E nrPDB
Length = 403
Score = 27.2 bits (59), Expect = 10.0, Method: Composition-based stats.
Identities = 8/25 (32%), Positives = 14/25 (56%)
Query: 95 PLTLSLHGWTGTGKNFVSKIIAENI 119
P L+G GTGK +++ +A +
Sbjct: 181 PKGCLLYGPPGTGKTLLARAVASQL 205
Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta
Posted date: Jan 3, 2023 9:05 PM
Number of letters in database: 10,336,785
Number of sequences in database: 36,641
Lambda K H
0.320 0.143 0.415
Lambda K H
0.267 0.0444 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 14,356,166
Number of Sequences: 36641
Number of extensions: 637706
Number of successful extensions: 2003
Number of sequences better than 10.0: 131
Number of HSP's better than 10.0 without gapping: 80
Number of HSP's successfully gapped in prelim test: 86
Number of HSP's that attempted gapping in prelim test: 1855
Number of HSP's gapped (non-prelim): 179
length of query: 332
length of database: 10,336,785
effective HSP length: 97
effective length of query: 235
effective length of database: 6,782,608
effective search space: 1593912880
effective search space used: 1593912880
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 60 (27.6 bits)