BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.


Reference for composition-based statistics starting in round 2:
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,  
Eugene V. Koonin, and Stephen F. Altschul (2001), 
"Improving the accuracy of PSI-BLAST protein database searches with 
composition-based statistics and other refinements",  Nucleic Acids Res. 29:2994-3005.

Query= O14625
         (94 letters)

Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta 
           36,641 sequences; 10,336,785 total letters

Searching..................................................done


Results from round 1


                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

1RJT-A nrPDB                                                          149   3e-37
2R3Z-A nrPDB                                                           47   1e-06
1LV9-A nrPDB                                                           47   2e-06
5OB5-A nrPDB                                                           37   0.003
5L7M-A nrPDB                                                           35   0.007
1MSH-A nrPDB                                                           35   0.010
1MI2-A nrPDB                                                           34   0.018
1NAP-A nrPDB                                                           34   0.018
1F9P-A nrPDB                                                           33   0.021
4XDX-A nrPDB                                                           28   0.88 
5UIW-B nrPDB                                                           28   0.92 
2HDL-A nrPDB                                                           28   0.93 
2MGS-A nrPDB                                                           28   1.0  
1ROD-A nrPDB                                                           27   1.6  
2VXW-A nrPDB                                                           27   1.6  
5CBA-E nrPDB                                                           27   2.4  
1EQT-A nrPDB                                                           26   3.4  
1IW7-A nrPDB                                                           26   3.5  
4AMY-A nrPDB                                                           26   4.6  
2GCD-A nrPDB                                                           25   5.6  
1U5R-A nrPDB                                                           25   5.6  
5JXL-A nrPDB                                                           25   7.9  

>1RJT-A nrPDB
          Length = 73

 Score =  149 bits (376), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 73/73 (100%), Positives = 73/73 (100%)

Query: 22 FPMFKRGRCLCIGPGVKAVKVADIEKASIMYPSNNCDKIEVIITLKENKGQRCLNPKSKQ 81
          FPMFKRGRCLCIGPGVKAVKVADIEKASIMYPSNNCDKIEVIITLKENKGQRCLNPKSKQ
Sbjct: 1  FPMFKRGRCLCIGPGVKAVKVADIEKASIMYPSNNCDKIEVIITLKENKGQRCLNPKSKQ 60

Query: 82 ARLIIKKVERKNF 94
          ARLIIKKVERKNF
Sbjct: 61 ARLIIKKVERKNF 73


>2R3Z-A nrPDB
          Length = 68

 Score = 47.4 bits (111), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 25/66 (37%), Positives = 40/66 (60%)

Query: 22 FPMFKRGRCLCIGPGVKAVKVADIEKASIMYPSNNCDKIEVIITLKENKGQRCLNPKSKQ 81
           P+ +  RC CI      V++  I K  I+  S +C ++E+I T+K+N  QRCLNP+SK 
Sbjct: 1  IPLARTVRCNCIHIDDGPVRMRAIGKLEIIPASLSCPRVEIIATMKKNDEQRCLNPESKT 60

Query: 82 ARLIIK 87
           + ++K
Sbjct: 61 IKNLMK 66


>1LV9-A nrPDB
          Length = 77

 Score = 47.4 bits (111), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 24/70 (34%), Positives = 41/70 (58%)

Query: 23 PMFKRGRCLCIGPGVKAVKVADIEKASIMYPSNNCDKIEVIITLKENKGQRCLNPKSKQA 82
          P+ +  RC CI    + V    +EK  I+  S  C ++E+I T+K+   +RCLNP+SK  
Sbjct: 2  PLSRTVRCTCISISNQPVNPRSLEKLEIIPASQFCPRVEIIATMKKKGEKRCLNPESKAI 61

Query: 83 RLIIKKVERK 92
          + ++K V ++
Sbjct: 62 KNLLKAVSKE 71


>5OB5-A nrPDB
          Length = 63

 Score = 36.6 bits (83), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 21/61 (34%), Positives = 35/61 (57%), Gaps = 2/61 (3%)

Query: 29 RCLCIGPGVKAVKVADIEKASIMYPSNNCDKIEVIITLKENKGQRCLNPKSKQARLIIKK 88
          RC C+   ++ + + +I+   +  P  +C + EVI TLK N  + CLNP S   + II+K
Sbjct: 3  RCQCLQ-TLQGIHLKNIQSVKVKSPGPHCAQTEVIATLK-NGQKACLNPASPMVKKIIEK 60

Query: 89 V 89
          +
Sbjct: 61 M 61


>5L7M-A nrPDB
          Length = 88

 Score = 35.0 bits (79), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 20/66 (30%), Positives = 35/66 (53%), Gaps = 1/66 (1%)

Query: 29 RCLCIGPGVKAVKVADIEKASIMYPSNNCDKIEVIITLKENKGQRCLNPKSKQARLIIKK 88
          +C C G     V +  I++  +  P N C K EV+I  K  K   C+NP++K  + +++ 
Sbjct: 10 KCRCSGVISTVVGLNIIDRIQVTPPGNGCPKTEVVIWTKMKKVI-CVNPRAKWLQRLLRH 68

Query: 89 VERKNF 94
          V+ K+ 
Sbjct: 69 VQSKSL 74


>1MSH-A nrPDB
          Length = 72

 Score = 34.7 bits (78), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 21/61 (34%), Positives = 35/61 (57%), Gaps = 2/61 (3%)

Query: 29 RCLCIGPGVKAVKVADIEKASIMYPSNNCDKIEVIITLKENKGQRCLNPKSKQARLIIKK 88
          RC C+   ++ +   +I+  ++  P  +C + EVI TLK N  + CLNP S   + II+K
Sbjct: 8  RCQCLQ-TLQGIHPKNIQSVNVKSPGPHCAQTEVIATLK-NGRKACLNPASPIVKKIIEK 65

Query: 89 V 89
          +
Sbjct: 66 M 66


>1MI2-A nrPDB
          Length = 73

 Score = 33.9 bits (76), Expect = 0.018,   Method: Compositional matrix adjust.
 Identities = 23/65 (35%), Positives = 37/65 (56%), Gaps = 4/65 (6%)

Query: 29 RCLCIGPGVKAVKVADIEKASIMYPSNNCDKIEVIITLKENKGQR-CLNPKSKQARLIIK 87
          RC C+   +  V   +I+  S+  P  +C + EVI TLK   GQ+ CL+P++   + II+
Sbjct: 8  RCQCLK-TLPRVDFKNIQSLSVTPPGPHCAQTEVIATLK--GGQKVCLDPEAPLVQKIIQ 64

Query: 88 KVERK 92
          K+  K
Sbjct: 65 KILNK 69


>1NAP-A nrPDB
          Length = 70

 Score = 33.9 bits (76), Expect = 0.018,   Method: Compositional matrix adjust.
 Identities = 18/60 (30%), Positives = 36/60 (60%), Gaps = 2/60 (3%)

Query: 29 RCLCIGPGVKAVKVADIEKASIMYPSNNCDKIEVIITLKENKGQRCLNPKSKQARLIIKK 88
          RCLCI      +   +I+   ++    +C+++EVI TLK+ + + CL+P + + + I++K
Sbjct: 4  RCLCIKT-TSGIHPKNIQSLEVIGKGTHCNQVEVIATLKDGR-KICLDPDAPRIKKIVQK 61


>1F9P-A nrPDB
          Length = 85

 Score = 33.5 bits (75), Expect = 0.021,   Method: Compositional matrix adjust.
 Identities = 17/65 (26%), Positives = 38/65 (58%), Gaps = 2/65 (3%)

Query: 24 MFKRGRCLCIGPGVKAVKVADIEKASIMYPSNNCDKIEVIITLKENKGQRCLNPKSKQAR 83
          ++   RC+CI      +   +I+   ++    +C+++EVI TLK+ + + CL+P + + +
Sbjct: 14 LYAELRCMCI-KTTSGIHPKNIQSLEVIGKGTHCNQVEVIATLKDGR-KICLDPDAPRIK 71

Query: 84 LIIKK 88
           I++K
Sbjct: 72 KIVQK 76


>4XDX-A nrPDB
          Length = 70

 Score = 28.1 bits (61), Expect = 0.88,   Method: Compositional matrix adjust.
 Identities = 16/63 (25%), Positives = 31/63 (49%), Gaps = 1/63 (1%)

Query: 26 KRGRCLCIGPGVKAVKVADIEKASIMYPSNNCDKIEVIITLKENKGQRCLNPKSKQARLI 85
          K  RC CI    K      I++  ++    +C   E+I+ L + + + CL+PK    + +
Sbjct: 1  KELRCQCIKTYSKPFHPKFIKELRVIESGPHCANTEIIVKLSDGR-ELCLDPKENWVQRV 59

Query: 86 IKK 88
          ++K
Sbjct: 60 VEK 62


>5UIW-B nrPDB
          Length = 75

 Score = 28.1 bits (61), Expect = 0.92,   Method: Compositional matrix adjust.
 Identities = 20/71 (28%), Positives = 31/71 (43%), Gaps = 4/71 (5%)

Query: 20 QGFPMFKRGRCLCIGPGVKAVKVADIEKASIMYPSNNCDKIEVIITLKENKGQRCLNPKS 79
          QG P+     C C     + +  A I++    Y S  C    V+   ++N+ Q C NP+ 
Sbjct: 1  QGPPLMALQSC-CFAYIARPLPRAHIKE--YFYTSGKCSNPAVVFVTRKNR-QVCANPEK 56

Query: 80 KQARLIIKKVE 90
          K  R  I  +E
Sbjct: 57 KWVREYINSLE 67


>2HDL-A nrPDB
          Length = 78

 Score = 28.1 bits (61), Expect = 0.93,   Method: Compositional matrix adjust.
 Identities = 20/64 (31%), Positives = 34/64 (53%), Gaps = 5/64 (7%)

Query: 28 GRCLCIGPGVKAVKVADIEKASIMYPSNNCDKIEVIITLK---ENKGQ-RCLNPKSKQAR 83
           +C C   G K ++ +D++K  +     +C++  VIIT K     +GQ  CL+PK +  +
Sbjct: 2  SKCKCSRKGPK-IRYSDVKKLEMKPKYPHCEEKMVIITTKSVSRYRGQEHCLHPKLQSTK 60

Query: 84 LIIK 87
            IK
Sbjct: 61 RFIK 64


>2MGS-A nrPDB
          Length = 78

 Score = 27.7 bits (60), Expect = 1.0,   Method: Compositional matrix adjust.
 Identities = 17/66 (25%), Positives = 34/66 (51%), Gaps = 2/66 (3%)

Query: 24 MFKRGRCLCIGPGVKAVKVADIEKASIMYPSNNCDKIEVIITLKENKGQRCLNPKSKQAR 83
          + +  RC+C+    + V    I    +      C K+EV+ +LK  K + CL+P++   +
Sbjct: 7  VLRELRCVCLQ-TTQGVHPKMISNLQVFAIGPQCSKVEVVASLKNGK-EICLDPEAPFLK 64

Query: 84 LIIKKV 89
           +I+K+
Sbjct: 65 KVIQKI 70


>1ROD-A nrPDB
          Length = 72

 Score = 27.3 bits (59), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 18/64 (28%), Positives = 32/64 (50%), Gaps = 1/64 (1%)

Query: 26 KRGRCLCIGPGVKAVKVADIEKASIMYPSNNCDKIEVIITLKENKGQRCLNPKSKQARLI 85
          K  RC CI    K      I++  ++    +C   E+I+ L + + + CL+P S   + I
Sbjct: 3  KELRCQCIKTYSKPFHPKFIKELRVIESGPHCANTEIIVKLSDGR-ELCLDPASPIVKKI 61

Query: 86 IKKV 89
          I+K+
Sbjct: 62 IEKM 65


>2VXW-A nrPDB
          Length = 69

 Score = 27.3 bits (59), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 17/68 (25%), Positives = 29/68 (42%), Gaps = 3/68 (4%)

Query: 23 PMFKRGRCLCIGPGVKAVKVADIEKASIMYPSNNCDKIEVIITLKENKGQRCLNPKSKQA 82
          P+  +    C     + +  A I++    Y S  C    V+   ++N+ Q C NP+ K  
Sbjct: 3  PLSSQSSACCFAYIARPLPRAHIKE--YFYTSGKCSNPAVVFVTRKNR-QVCANPEKKWV 59

Query: 83 RLIIKKVE 90
          R  I  +E
Sbjct: 60 REYINSLE 67


>5CBA-E nrPDB
          Length = 88

 Score = 26.6 bits (57), Expect = 2.4,   Method: Compositional matrix adjust.
 Identities = 14/65 (21%), Positives = 36/65 (55%), Gaps = 1/65 (1%)

Query: 29 RCLCIGPGVKAVKVADIEKASIMYPSNNCDKIEVIITLKENKGQRCLNPKSKQARLIIKK 88
          RC C+      +    I++  I+   N C + E+I+  K+NK   C++P+++  + +++ 
Sbjct: 11 RCRCVQESSVFIPRRFIDRIQILPRGNGCPRKEIIV-WKKNKSIVCVDPQAEWIQRMMEV 69

Query: 89 VERKN 93
          + +++
Sbjct: 70 LRKRS 74


>1EQT-A nrPDB
          Length = 68

 Score = 26.2 bits (56), Expect = 3.4,   Method: Compositional matrix adjust.
 Identities = 13/41 (31%), Positives = 19/41 (46%), Gaps = 1/41 (2%)

Query: 50 IMYPSNNCDKIEVIITLKENKGQRCLNPKSKQARLIIKKVE 90
            Y S  C    V+   ++N+ Q C NP+ K  R  I  +E
Sbjct: 27 YFYTSGKCSNPAVVFVTRKNR-QVCANPEKKWVREYINSLE 66


>1IW7-A nrPDB
          Length = 315

 Score = 26.2 bits (56), Expect = 3.5,   Method: Composition-based stats.
 Identities = 17/54 (31%), Positives = 26/54 (48%), Gaps = 1/54 (1%)

Query: 34  GPGVKAVKVADIEKASIMYPSNNCDKIEVIITLKENKGQRCLNPKSKQARLIIK 87
           G  V +V + D+       P    D +E+I+ LKE    R LNP  +   L++K
Sbjct: 50  GTAVTSVYIEDVLHEFSTIPGVKEDVVEIILNLKE-LVVRFLNPSLQTVTLLLK 102


>4AMY-A nrPDB
          Length = 710

 Score = 25.8 bits (55), Expect = 4.6,   Method: Composition-based stats.
 Identities = 11/32 (34%), Positives = 17/32 (53%)

Query: 37  VKAVKVADIEKASIMYPSNNCDKIEVIITLKE 68
           VK +  +D +   I YPS +  KI + I  K+
Sbjct: 427 VKGIDASDYQTVQIFYPSKDGTKIPMFIVHKK 458


>2GCD-A nrPDB
          Length = 309

 Score = 25.4 bits (54), Expect = 5.6,   Method: Composition-based stats.
 Identities = 14/31 (45%), Positives = 18/31 (58%), Gaps = 2/31 (6%)

Query: 26  KRGRCLCIGPGVKAVKVADIEKASIMYPSNN 56
           K G  L   PG+  VK+ D   ASIM P+N+
Sbjct: 142 KAGNILLSEPGL--VKLGDFGSASIMAPANS 170


>1U5R-A nrPDB
          Length = 348

 Score = 25.4 bits (54), Expect = 5.6,   Method: Composition-based stats.
 Identities = 14/31 (45%), Positives = 18/31 (58%), Gaps = 2/31 (6%)

Query: 26  KRGRCLCIGPGVKAVKVADIEKASIMYPSNN 56
           K G  L   PG+  VK+ D   ASIM P+N+
Sbjct: 181 KAGNILLSEPGL--VKLGDFGSASIMAPANS 209


>5JXL-A nrPDB
          Length = 851

 Score = 25.0 bits (53), Expect = 7.9,   Method: Composition-based stats.
 Identities = 16/47 (34%), Positives = 25/47 (53%), Gaps = 9/47 (19%)

Query: 34  GPGVKAVKVADIEKASIMYPSNNCD-------KIEVIITLKENKGQR 73
           G GVKAVK AD   + I + +NN D        I++ + +  + G+R
Sbjct: 334 GTGVKAVKKAD--GSGIEFVNNNADGTTDNMKNIDLTVNVGNSAGER 378


Searching..................................................done


Results from round 2


                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value
Sequences used in model and found again:

1RJT-A nrPDB                                                          106   2e-24
2R3Z-A nrPDB                                                          101   6e-23
1LV9-A nrPDB                                                           98   8e-22

Sequences not found previously or not previously below threshold:

1F9P-A nrPDB                                                           45   8e-06
1NAP-A nrPDB                                                           43   3e-05
5CBA-E nrPDB                                                           41   1e-04
5L7M-A nrPDB                                                           41   1e-04
2MGS-A nrPDB                                                           40   3e-04
1PFN-A nrPDB                                                           40   3e-04
1MSH-A nrPDB                                                           39   5e-04
1ROD-A nrPDB                                                           39   6e-04
1MI2-A nrPDB                                                           38   8e-04
1PLF-A nrPDB                                                           38   9e-04
5OB5-A nrPDB                                                           38   0.001
4XDX-A nrPDB                                                           38   0.001
2HDL-A nrPDB                                                           33   0.039
4R1J-A nrPDB                                                           29   0.56 
5UIW-B nrPDB                                                           28   0.65 
2VXW-A nrPDB                                                           28   0.93 
6EHZ-A nrPDB                                                           27   1.8  
2JYO-A nrPDB                                                           27   2.1  
1EQT-A nrPDB                                                           26   4.0  
5YAM-A nrPDB                                                           26   4.3  
2N55-A nrPDB                                                           26   4.3  
2K04-A nrPDB                                                           26   4.5  

>1RJT-A nrPDB
          Length = 73

 Score =  106 bits (265), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 73/73 (100%), Positives = 73/73 (100%)

Query: 22 FPMFKRGRCLCIGPGVKAVKVADIEKASIMYPSNNCDKIEVIITLKENKGQRCLNPKSKQ 81
          FPMFKRGRCLCIGPGVKAVKVADIEKASIMYPSNNCDKIEVIITLKENKGQRCLNPKSKQ
Sbjct: 1  FPMFKRGRCLCIGPGVKAVKVADIEKASIMYPSNNCDKIEVIITLKENKGQRCLNPKSKQ 60

Query: 82 ARLIIKKVERKNF 94
          ARLIIKKVERKNF
Sbjct: 61 ARLIIKKVERKNF 73


>2R3Z-A nrPDB
          Length = 68

 Score =  101 bits (252), Expect = 6e-23,   Method: Composition-based stats.
 Identities = 25/67 (37%), Positives = 40/67 (59%)

Query: 22 FPMFKRGRCLCIGPGVKAVKVADIEKASIMYPSNNCDKIEVIITLKENKGQRCLNPKSKQ 81
           P+ +  RC CI      V++  I K  I+  S +C ++E+I T+K+N  QRCLNP+SK 
Sbjct: 1  IPLARTVRCNCIHIDDGPVRMRAIGKLEIIPASLSCPRVEIIATMKKNDEQRCLNPESKT 60

Query: 82 ARLIIKK 88
           + ++K 
Sbjct: 61 IKNLMKA 67


>1LV9-A nrPDB
          Length = 77

 Score = 97.8 bits (242), Expect = 8e-22,   Method: Composition-based stats.
 Identities = 24/71 (33%), Positives = 41/71 (57%)

Query: 22 FPMFKRGRCLCIGPGVKAVKVADIEKASIMYPSNNCDKIEVIITLKENKGQRCLNPKSKQ 81
           P+ +  RC CI    + V    +EK  I+  S  C ++E+I T+K+   +RCLNP+SK 
Sbjct: 1  VPLSRTVRCTCISISNQPVNPRSLEKLEIIPASQFCPRVEIIATMKKKGEKRCLNPESKA 60

Query: 82 ARLIIKKVERK 92
           + ++K V ++
Sbjct: 61 IKNLLKAVSKE 71


>1F9P-A nrPDB
          Length = 85

 Score = 45.1 bits (105), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 17/65 (26%), Positives = 37/65 (56%), Gaps = 2/65 (3%)

Query: 24 MFKRGRCLCIGPGVKAVKVADIEKASIMYPSNNCDKIEVIITLKENKGQRCLNPKSKQAR 83
          ++   RC+CI      +   +I+   ++    +C+++EVI TLK +  + CL+P + + +
Sbjct: 14 LYAELRCMCIKTTSG-IHPKNIQSLEVIGKGTHCNQVEVIATLK-DGRKICLDPDAPRIK 71

Query: 84 LIIKK 88
           I++K
Sbjct: 72 KIVQK 76


>1NAP-A nrPDB
          Length = 70

 Score = 42.7 bits (99), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 18/60 (30%), Positives = 35/60 (58%), Gaps = 2/60 (3%)

Query: 29 RCLCIGPGVKAVKVADIEKASIMYPSNNCDKIEVIITLKENKGQRCLNPKSKQARLIIKK 88
          RCLCI      +   +I+   ++    +C+++EVI TLK +  + CL+P + + + I++K
Sbjct: 4  RCLCIKTTSG-IHPKNIQSLEVIGKGTHCNQVEVIATLK-DGRKICLDPDAPRIKKIVQK 61


>5CBA-E nrPDB
          Length = 88

 Score = 40.8 bits (94), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 14/67 (20%), Positives = 36/67 (53%), Gaps = 1/67 (1%)

Query: 27 RGRCLCIGPGVKAVKVADIEKASIMYPSNNCDKIEVIITLKENKGQRCLNPKSKQARLII 86
            RC C+      +    I++  I+   N C + E+I+  K+NK   C++P+++  + ++
Sbjct: 9  SLRCRCVQESSVFIPRRFIDRIQILPRGNGCPRKEIIV-WKKNKSIVCVDPQAEWIQRMM 67

Query: 87 KKVERKN 93
          + + +++
Sbjct: 68 EVLRKRS 74


>5L7M-A nrPDB
          Length = 88

 Score = 40.8 bits (94), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 20/66 (30%), Positives = 35/66 (53%), Gaps = 1/66 (1%)

Query: 29 RCLCIGPGVKAVKVADIEKASIMYPSNNCDKIEVIITLKENKGQRCLNPKSKQARLIIKK 88
          +C C G     V +  I++  +  P N C K EV+I  K  K   C+NP++K  + +++ 
Sbjct: 10 KCRCSGVISTVVGLNIIDRIQVTPPGNGCPKTEVVIWTKMKK-VICVNPRAKWLQRLLRH 68

Query: 89 VERKNF 94
          V+ K+ 
Sbjct: 69 VQSKSL 74


>2MGS-A nrPDB
          Length = 78

 Score = 39.7 bits (91), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 17/64 (26%), Positives = 33/64 (51%), Gaps = 2/64 (3%)

Query: 26 KRGRCLCIGPGVKAVKVADIEKASIMYPSNNCDKIEVIITLKENKGQRCLNPKSKQARLI 85
          +  RC+C+    + V    I    +      C K+EV+ +LK N  + CL+P++   + +
Sbjct: 9  RELRCVCLQ-TTQGVHPKMISNLQVFAIGPQCSKVEVVASLK-NGKEICLDPEAPFLKKV 66

Query: 86 IKKV 89
          I+K+
Sbjct: 67 IQKI 70


>1PFN-A nrPDB
          Length = 68

 Score = 39.7 bits (91), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 18/65 (27%), Positives = 32/65 (49%), Gaps = 2/65 (3%)

Query: 25 FKRGRCLCIGPGVKAVKVADIEKASIMYPSNNCDKIEVIITLKENKGQRCLNPKSKQARL 84
           K  RC C+    + V+   I    ++    +C   ++I TLK N  + CL+ ++   + 
Sbjct: 3  AKELRCQCVKTTSQ-VRPRHITSLEVIKAGPHCPTAQLIATLK-NGRKICLDLQAPLYKK 60

Query: 85 IIKKV 89
          IIKK+
Sbjct: 61 IIKKL 65


>1MSH-A nrPDB
          Length = 72

 Score = 38.9 bits (89), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 21/66 (31%), Positives = 36/66 (54%), Gaps = 2/66 (3%)

Query: 24 MFKRGRCLCIGPGVKAVKVADIEKASIMYPSNNCDKIEVIITLKENKGQRCLNPKSKQAR 83
          +    RC C+   ++ +   +I+  ++  P  +C + EVI TLK N  + CLNP S   +
Sbjct: 3  VATELRCQCLQ-TLQGIHPKNIQSVNVKSPGPHCAQTEVIATLK-NGRKACLNPASPIVK 60

Query: 84 LIIKKV 89
           II+K+
Sbjct: 61 KIIEKM 66


>1ROD-A nrPDB
          Length = 72

 Score = 38.5 bits (88), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 18/65 (27%), Positives = 31/65 (47%), Gaps = 1/65 (1%)

Query: 25 FKRGRCLCIGPGVKAVKVADIEKASIMYPSNNCDKIEVIITLKENKGQRCLNPKSKQARL 84
           K  RC CI    K      I++  ++    +C   E+I+ L  +  + CL+P S   + 
Sbjct: 2  AKELRCQCIKTYSKPFHPKFIKELRVIESGPHCANTEIIVKL-SDGRELCLDPASPIVKK 60

Query: 85 IIKKV 89
          II+K+
Sbjct: 61 IIEKM 65


>1MI2-A nrPDB
          Length = 73

 Score = 38.1 bits (87), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 21/69 (30%), Positives = 36/69 (52%), Gaps = 2/69 (2%)

Query: 24 MFKRGRCLCIGPGVKAVKVADIEKASIMYPSNNCDKIEVIITLKENKGQRCLNPKSKQAR 83
          +    RC C+   +  V   +I+  S+  P  +C + EVI TLK    + CL+P++   +
Sbjct: 3  VASELRCQCLK-TLPRVDFKNIQSLSVTPPGPHCAQTEVIATLK-GGQKVCLDPEAPLVQ 60

Query: 84 LIIKKVERK 92
           II+K+  K
Sbjct: 61 KIIQKILNK 69


>1PLF-A nrPDB
          Length = 72

 Score = 38.1 bits (87), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 13/63 (20%), Positives = 30/63 (47%), Gaps = 2/63 (3%)

Query: 29 RCLCIGPGVKAVKVADIEKASIMYPSNNCDKIEVIITLKENKGQRCLNPKSKQARLIIKK 88
          +C+C+      +    I    ++    +C   ++I TLK    + CL+ ++   + IIK+
Sbjct: 11 QCVCLKTTSG-INPRHISSLEVIGAGLHCPSPQLIATLK-TGRKICLDQQNPLYKKIIKR 68

Query: 89 VER 91
          + +
Sbjct: 69 LLK 71


>5OB5-A nrPDB
          Length = 63

 Score = 37.7 bits (86), Expect = 0.001,   Method: Composition-based stats.
 Identities = 21/63 (33%), Positives = 36/63 (57%), Gaps = 2/63 (3%)

Query: 29 RCLCIGPGVKAVKVADIEKASIMYPSNNCDKIEVIITLKENKGQRCLNPKSKQARLIIKK 88
          RC C+   ++ + + +I+   +  P  +C + EVI TLK N  + CLNP S   + II+K
Sbjct: 3  RCQCLQ-TLQGIHLKNIQSVKVKSPGPHCAQTEVIATLK-NGQKACLNPASPMVKKIIEK 60

Query: 89 VER 91
          + +
Sbjct: 61 MLK 63


>4XDX-A nrPDB
          Length = 70

 Score = 37.7 bits (86), Expect = 0.001,   Method: Composition-based stats.
 Identities = 16/67 (23%), Positives = 32/67 (47%), Gaps = 1/67 (1%)

Query: 26 KRGRCLCIGPGVKAVKVADIEKASIMYPSNNCDKIEVIITLKENKGQRCLNPKSKQARLI 85
          K  RC CI    K      I++  ++    +C   E+I+ L  +  + CL+PK    + +
Sbjct: 1  KELRCQCIKTYSKPFHPKFIKELRVIESGPHCANTEIIVKL-SDGRELCLDPKENWVQRV 59

Query: 86 IKKVERK 92
          ++K  ++
Sbjct: 60 VEKFLKR 66


>2HDL-A nrPDB
          Length = 78

 Score = 32.7 bits (73), Expect = 0.039,   Method: Composition-based stats.
 Identities = 18/63 (28%), Positives = 32/63 (50%), Gaps = 5/63 (7%)

Query: 29 RCLCIGPGVKAVKVADIEKASIMYPSNNCDKIEVIITLKE----NKGQRCLNPKSKQARL 84
          +C C   G K ++ +D++K  +     +C++  VIIT K        + CL+PK +  + 
Sbjct: 3  KCKCSRKGPK-IRYSDVKKLEMKPKYPHCEEKMVIITTKSVSRYRGQEHCLHPKLQSTKR 61

Query: 85 IIK 87
           IK
Sbjct: 62 FIK 64


>4R1J-A nrPDB
          Length = 197

 Score = 28.9 bits (63), Expect = 0.56,   Method: Composition-based stats.
 Identities = 14/58 (24%), Positives = 33/58 (56%), Gaps = 1/58 (1%)

Query: 14  LCATVVQGFPM-FKRGRCLCIGPGVKAVKVADIEKASIMYPSNNCDKIEVIITLKENK 70
           +C+ +V+ FP+   + R + +   +K V +  I+  +++   +N DK+E +   K++K
Sbjct: 65  VCSGLVKHFPLDAMQERYVVVVCNLKPVNMRGIKSTAMVLCGSNDDKVEFVEPPKDSK 122


>5UIW-B nrPDB
          Length = 75

 Score = 28.5 bits (62), Expect = 0.65,   Method: Composition-based stats.
 Identities = 20/71 (28%), Positives = 30/71 (42%), Gaps = 4/71 (5%)

Query: 20 QGFPMFKRGRCLCIGPGVKAVKVADIEKASIMYPSNNCDKIEVIITLKENKGQRCLNPKS 79
          QG P+     C C     + +  A I+     Y S  C    V+   ++N+ Q C NP+ 
Sbjct: 1  QGPPLMALQSC-CFAYIARPLPRAHIK--EYFYTSGKCSNPAVVFVTRKNR-QVCANPEK 56

Query: 80 KQARLIIKKVE 90
          K  R  I  +E
Sbjct: 57 KWVREYINSLE 67


>2VXW-A nrPDB
          Length = 69

 Score = 28.1 bits (61), Expect = 0.93,   Method: Composition-based stats.
 Identities = 17/68 (25%), Positives = 28/68 (41%), Gaps = 3/68 (4%)

Query: 23 PMFKRGRCLCIGPGVKAVKVADIEKASIMYPSNNCDKIEVIITLKENKGQRCLNPKSKQA 82
          P+  +    C     + +  A I+     Y S  C    V+   ++N+ Q C NP+ K  
Sbjct: 3  PLSSQSSACCFAYIARPLPRAHIK--EYFYTSGKCSNPAVVFVTRKNR-QVCANPEKKWV 59

Query: 83 RLIIKKVE 90
          R  I  +E
Sbjct: 60 REYINSLE 67


>6EHZ-A nrPDB
          Length = 98

 Score = 27.0 bits (58), Expect = 1.8,   Method: Composition-based stats.
 Identities = 17/70 (24%), Positives = 32/70 (45%), Gaps = 3/70 (4%)

Query: 23 PMFKRGRCLCIGPGVKAVKVADIEKASIMYPSNNCDKIEVIITLKENKGQRCLNPKSKQA 82
          P+    RC C        + A+++   I+   N    ++++  LK N  Q C++PK K  
Sbjct: 2  PVSLSYRCPCRFFESHIAR-ANVKHLKILNTPNCA--LQIVARLKNNNRQVCIDPKLKWI 58

Query: 83 RLIIKKVERK 92
          +  ++K   K
Sbjct: 59 QEYLEKALNK 68


>2JYO-A nrPDB
          Length = 70

 Score = 27.0 bits (58), Expect = 2.1,   Method: Composition-based stats.
 Identities = 15/61 (24%), Positives = 26/61 (42%), Gaps = 1/61 (1%)

Query: 32 CIGPGVKAVKVADIEKASIMYPSNNCDKIEVIITLKENKGQRCLNPKSKQARLIIKKVER 91
          C+G   + +    I   +    +  CD I  II   + K   C NPK    + I++ + +
Sbjct: 7  CLGYTDRILHPKFIVGFTRQLANEGCD-INAIIFHTKKKLSVCANPKQTWVKYIVRLLSK 65

Query: 92 K 92
          K
Sbjct: 66 K 66


>1EQT-A nrPDB
          Length = 68

 Score = 25.8 bits (55), Expect = 4.0,   Method: Composition-based stats.
 Identities = 13/42 (30%), Positives = 19/42 (45%), Gaps = 1/42 (2%)

Query: 49 SIMYPSNNCDKIEVIITLKENKGQRCLNPKSKQARLIIKKVE 90
             Y S  C    V+   ++N+ Q C NP+ K  R  I  +E
Sbjct: 26 EYFYTSGKCSNPAVVFVTRKNR-QVCANPEKKWVREYINSLE 66


>5YAM-A nrPDB
          Length = 69

 Score = 25.8 bits (55), Expect = 4.3,   Method: Composition-based stats.
 Identities = 12/42 (28%), Positives = 20/42 (47%), Gaps = 1/42 (2%)

Query: 49 SIMYPSNNCDKIEVIITLKENKGQRCLNPKSKQARLIIKKVE 90
             Y S+ C  + V+   + N+ Q C NP+ K  +  I  +E
Sbjct: 27 EYFYTSSKCSNLAVVFVTRRNR-QVCANPEKKWVQEYINYLE 67


>2N55-A nrPDB
          Length = 70

 Score = 25.8 bits (55), Expect = 4.3,   Method: Composition-based stats.
 Identities = 17/70 (24%), Positives = 32/70 (45%), Gaps = 3/70 (4%)

Query: 23 PMFKRGRCLCIGPGVKAVKVADIEKASIMYPSNNCDKIEVIITLKENKGQRCLNPKSKQA 82
          P+    RC C        + A+++   I+   N    ++++  LK N  Q C++PK K  
Sbjct: 4  PVSLSYRCPCRFFESHVAR-ANVKHLKILNTPNCA--LQIVARLKNNNRQVCIDPKCKWC 60

Query: 83 RLIIKKVERK 92
          +  ++K   K
Sbjct: 61 QEYLEKALNK 70


>2K04-A nrPDB
          Length = 70

 Score = 25.8 bits (55), Expect = 4.5,   Method: Composition-based stats.
 Identities = 16/66 (24%), Positives = 30/66 (45%), Gaps = 3/66 (4%)

Query: 23 PMFKRGRCLCIGPGVKAVKVADIEKASIMYPSNNCDKIEVIITLKENKGQRCLNPKSKQA 82
          P+    RC C        + A+++   I+   N     +++  LK N  Q C++PK K  
Sbjct: 4  PVSLSYRCPCRFFESHVAR-ANVKHLKILNTPNCA--CQIVARLKNNNRQVCIDPKLKWI 60

Query: 83 RLIIKK 88
          +  ++K
Sbjct: 61 QEYLEK 66


  Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta
    Posted date:  Jan 3, 2023  9:05 PM
  Number of letters in database: 10,336,785
  Number of sequences in database:  36,641
  
Lambda     K      H
   0.315    0.134    0.362 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,109,496
Number of Sequences: 36641
Number of extensions: 94030
Number of successful extensions: 327
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 31
Number of HSP's successfully gapped in prelim test: 27
Number of HSP's that attempted gapping in prelim test: 285
Number of HSP's gapped (non-prelim): 59
length of query: 94
length of database: 10,336,785
effective HSP length: 62
effective length of query: 32
effective length of database: 8,065,043
effective search space: 258081376
effective search space used: 258081376
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.1 bits)
S2: 52 (24.6 bits)