BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.


Reference for composition-based statistics starting in round 2:
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,  
Eugene V. Koonin, and Stephen F. Altschul (2001), 
"Improving the accuracy of PSI-BLAST protein database searches with 
composition-based statistics and other refinements",  Nucleic Acids Res. 29:2994-3005.

Query= O14558
         (160 letters)

Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta 
           36,641 sequences; 10,336,785 total letters

Searching..................................................done


Results from round 1


                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

5LTW-C nrPDB                                                          294   1e-80
2KLR-A nrPDB                                                          144   1e-35
6F2R-D nrPDB                                                          103   4e-23
6F2R-C nrPDB                                                          103   4e-23
6F2R-T nrPDB                                                           69   6e-13
4YDZ-A nrPDB                                                           60   4e-10
5OQL-X nrPDB                                                           28   1.8  
2BA1-H nrPDB                                                           28   1.9  
4ZJA-A nrPDB                                                           28   2.0  
3SWO-A nrPDB                                                           27   3.9  
3PM6-A nrPDB                                                           27   4.3  
3T0Q-A nrPDB                                                           27   5.1  
3K5T-A nrPDB                                                           26   7.6  

>5LTW-C nrPDB
          Length = 149

 Score =  294 bits (753), Expect = 1e-80,   Method: Compositional matrix adjust.
 Identities = 149/149 (100%), Positives = 149/149 (100%)

Query: 1   MEIPVPVQPSWLRRASAPLPGLSAPGRLFDQRFGEGLLEAELAALCPTTLAPYYLRAPSV 60
           MEIPVPVQPSWLRRASAPLPGLSAPGRLFDQRFGEGLLEAELAALCPTTLAPYYLRAPSV
Sbjct: 1   MEIPVPVQPSWLRRASAPLPGLSAPGRLFDQRFGEGLLEAELAALCPTTLAPYYLRAPSV 60

Query: 61  ALPVAQVPTDPGHFSVLLDVKHFSPEEIAVKVVGEHVEVHARHEERPDEHGFVAREFHRR 120
           ALPVAQVPTDPGHFSVLLDVKHFSPEEIAVKVVGEHVEVHARHEERPDEHGFVAREFHRR
Sbjct: 61  ALPVAQVPTDPGHFSVLLDVKHFSPEEIAVKVVGEHVEVHARHEERPDEHGFVAREFHRR 120

Query: 121 YRLPPGVDPAAVTSALSPEGVLSIQAAPA 149
           YRLPPGVDPAAVTSALSPEGVLSIQAAPA
Sbjct: 121 YRLPPGVDPAAVTSALSPEGVLSIQAAPA 149


>2KLR-A nrPDB
          Length = 175

 Score =  144 bits (364), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 73/159 (45%), Positives = 102/159 (64%), Gaps = 11/159 (6%)

Query: 3   IPVPVQPSWLRRASAPLPGLSAPGRLFDQRFGEGLLEAELAALCPTTLAPYYLRAPSV-- 60
           + + +   W+RR   P     +P RLFDQ FGE LLE++L     T+L+P+YLR PS   
Sbjct: 1   MDIAIHHPWIRRPFFPF---HSPSRLFDQFFGEHLLESDLFPTS-TSLSPFYLRPPSFLR 56

Query: 61  -----ALPVAQVPTDPGHFSVLLDVKHFSPEEIAVKVVGEHVEVHARHEERPDEHGFVAR 115
                   ++++  +   FSV LDVKHFSPEE+ VKV+G+ +EVH +HEER DEHGF++R
Sbjct: 57  APSWFDTGLSEMRLEKDRFSVNLDVKHFSPEELKVKVLGDVIEVHGKHEERQDEHGFISR 116

Query: 116 EFHRRYRLPPGVDPAAVTSALSPEGVLSIQAAPASAQAP 154
           EFHR+YR+P  VDP  +TS+LS +GVL++         P
Sbjct: 117 EFHRKYRIPADVDPLTITSSLSSDGVLTVNGPRKQVSGP 155


>6F2R-D nrPDB
          Length = 182

 Score =  103 bits (256), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 57/131 (43%), Positives = 77/131 (58%), Gaps = 8/131 (6%)

Query: 22  LSAPGRLFDQRFGEGLLEAELAALCPTTLAPYYLR------APSVALPVAQVPTDPGHFS 75
            + P RL +QRFGEGLL  E+  L PT    YY+R              +++    G F 
Sbjct: 18  FANPSRLGEQRFGEGLLPEEI--LTPTLYHGYYVRPRAAPAGEGSRAGASELRLSEGKFQ 75

Query: 76  VLLDVKHFSPEEIAVKVVGEHVEVHARHEERPDEHGFVAREFHRRYRLPPGVDPAAVTSA 135
             LDV HF+P+E+ V+ V   +EV ARH +R D HGFV+REF R Y LP  VDP  V +A
Sbjct: 76  AFLDVSHFTPDEVTVRTVDNLLEVSARHPQRLDRHGFVSREFCRTYVLPADVDPWRVRAA 135

Query: 136 LSPEGVLSIQA 146
           LS +G+L+++A
Sbjct: 136 LSHDGILNLEA 146


>6F2R-C nrPDB
          Length = 203

 Score =  103 bits (256), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 57/131 (43%), Positives = 77/131 (58%), Gaps = 8/131 (6%)

Query: 22  LSAPGRLFDQRFGEGLLEAELAALCPTTLAPYYLR------APSVALPVAQVPTDPGHFS 75
            + P RL +QRFGEGLL  E+  L PT    YY+R              +++    G F 
Sbjct: 39  FANPSRLGEQRFGEGLLPEEI--LTPTLYHGYYVRPRAAPAGEGSRAGASELRLSEGKFQ 96

Query: 76  VLLDVKHFSPEEIAVKVVGEHVEVHARHEERPDEHGFVAREFHRRYRLPPGVDPAAVTSA 135
             LDV HF+P+E+ V+ V   +EV ARH +R D HGFV+REF R Y LP  VDP  V +A
Sbjct: 97  AFLDVSHFTPDEVTVRTVDNLLEVSARHPQRLDRHGFVSREFCRTYVLPADVDPWRVRAA 156

Query: 136 LSPEGVLSIQA 146
           LS +G+L+++A
Sbjct: 157 LSHDGILNLEA 167


>6F2R-T nrPDB
          Length = 161

 Score = 69.3 bits (168), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 29/74 (39%), Positives = 48/74 (64%)

Query: 73  HFSVLLDVKHFSPEEIAVKVVGEHVEVHARHEERPDEHGFVAREFHRRYRLPPGVDPAAV 132
           HF +LLDV  F PE+I ++     + + A+H  R DEHGF++R F R+Y+LP GV+   +
Sbjct: 70  HFQILLDVVQFLPEDIIIQTFEGWLLIKAQHGTRMDEHGFISRSFTRQYKLPDGVEIKDL 129

Query: 133 TSALSPEGVLSIQA 146
           ++ L  +G+L ++ 
Sbjct: 130 SAVLCHDGILVVEV 143


>4YDZ-A nrPDB
          Length = 159

 Score = 60.1 bits (144), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 38/125 (30%), Positives = 59/125 (47%), Gaps = 21/125 (16%)

Query: 42  LAALCPTT------------LAPYYLRAPS--------VALPVAQVPTDPGHFSVLLDVK 81
           +++LCP T            + PY+ +  S        V   + +V      F V LDV 
Sbjct: 1   MSSLCPYTGRPTGLFRDFEDMMPYWAQRHSMLNNFNNIVPQQLNEVENTAQKFCVKLDVA 60

Query: 82  HFSPEEIAVKVVGEHVEVHARHEERPDEHGFVAREFHRRYRLPPGVDPAAVTSALSPEGV 141
            F PEE+ V + G  + +   HE +  EHGF  R F R++ LP  VD A + + ++ EG 
Sbjct: 61  AFKPEELKVNLEGHVLTIEGHHEVKT-EHGFSKRSFTRQFTLPKDVDLAHIHTVINKEGQ 119

Query: 142 LSIQA 146
           ++I A
Sbjct: 120 MTIDA 124


>5OQL-X nrPDB
          Length = 630

 Score = 28.1 bits (61), Expect = 1.8,   Method: Composition-based stats.
 Identities = 23/75 (30%), Positives = 36/75 (48%), Gaps = 10/75 (13%)

Query: 64  VAQVPTDPGHFSVLLDVKHFSPEEIAVKVVGEHVEVHARHEERPDEHGFVAR-------E 116
           +A V T  GH   +LD+     E      VG   +  AR+ + P+E   V R        
Sbjct: 320 LAYVETLFGHQDEILDIDALGQERCVS--VGAR-DRTARYWKVPEESQLVFRGGGEGGSS 376

Query: 117 FHRRYRLPPGVDPAA 131
             ++++LPPG+DPA+
Sbjct: 377 NTKKHKLPPGMDPAS 391


>2BA1-H nrPDB
          Length = 259

 Score = 28.1 bits (61), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 21/56 (37%), Positives = 27/56 (48%), Gaps = 3/56 (5%)

Query: 85  PEEIAVKVVGEHVEVHARHEERPDEHGFVAREFHRRYRLPPGVDPAAVTSALSPEG 140
           PE+I V +  ++V    R  ER D  GF   EF R+  + P V   A  SAL   G
Sbjct: 2   PEDILVDIKRDYVLSKLRDNERIDGRGF--DEF-RKVEIIPNVIEKAEGSALVKLG 54


>4ZJA-A nrPDB
          Length = 147

 Score = 28.1 bits (61), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 18/83 (21%), Positives = 41/83 (49%), Gaps = 10/83 (12%)

Query: 70  DPGHFSVLLDVKHFSPEEIAVKVVGEHVEVHARHEERP--DEHGFVAR-----EFHRRYR 122
           D  ++ + + V  +  EE+ ++ VG ++ +  +H E    D+  ++ R     +F   + 
Sbjct: 50  DANNYLLTVSVPGWKEEELEIETVGGNLNITGKHTEETVEDQTHWIYRGIRKADFQLSFS 109

Query: 123 LPPGVDPAAVTSALSPEGVLSIQ 145
           LP   + A V +A   +G+L ++
Sbjct: 110 LP---EHAKVNNAKLEQGLLLVE 129


>3SWO-A nrPDB
          Length = 399

 Score = 26.9 bits (58), Expect = 3.9,   Method: Compositional matrix adjust.
 Identities = 21/48 (43%), Positives = 23/48 (47%), Gaps = 9/48 (18%)

Query: 107 PDEHGFVAREFHRRYRLPPGVDPAAVTSALSPEGVLSIQAAPASAQAP 154
            D  GF A E HR+  L      A+VTS L    VL     PASAQ P
Sbjct: 203 TDTPGFTANEIHRKLSL-----RASVTSEL----VLDNVRLPASAQLP 241


>3PM6-A nrPDB
          Length = 306

 Score = 26.9 bits (58), Expect = 4.3,   Method: Compositional matrix adjust.
 Identities = 16/49 (32%), Positives = 25/49 (51%), Gaps = 4/49 (8%)

Query: 43  AALCPTTLAPYYLRAPSVALPVAQVPT----DPGHFSVLLDVKHFSPEE 87
           AA  P TL   + + P +    A +      +PG  S+++D+ HFS EE
Sbjct: 80  AASVPITLHLDHAQDPEIIKRAADLSRSETHEPGFDSIMVDMSHFSKEE 128


>3T0Q-A nrPDB
          Length = 349

 Score = 26.6 bits (57), Expect = 5.1,   Method: Compositional matrix adjust.
 Identities = 14/45 (31%), Positives = 20/45 (44%)

Query: 48  TTLAPYYLRAPSVALPVAQVPTDPGHFSVLLDVKHFSPEEIAVKV 92
           T L  Y L   S  L    +P DP H S  L+   F+ +  + K+
Sbjct: 302 TYLLQYSLVGDSKTLMFVNIPPDPNHISETLNSLRFASKVNSTKI 346


>3K5T-A nrPDB
          Length = 731

 Score = 25.8 bits (55), Expect = 7.6,   Method: Compositional matrix adjust.
 Identities = 18/51 (35%), Positives = 26/51 (50%), Gaps = 4/51 (7%)

Query: 53  YYLRAPSVALPVAQVPTDPGHFS---VLLDVKHF-SPEEIAVKVVGEHVEV 99
           Y+L    + L V    TD GH++   V  + K + SPEE+A K     V+V
Sbjct: 190 YFLHPTGLELLVDHGSTDAGHWAVEQVWYNGKFYGSPEELARKYADGEVDV 240


Searching..................................................done


Results from round 2


                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value
Sequences used in model and found again:

5LTW-C nrPDB                                                          210   2e-55
2KLR-A nrPDB                                                          206   4e-54
6F2R-D nrPDB                                                          176   3e-45
6F2R-C nrPDB                                                          176   3e-45
4YDZ-A nrPDB                                                          141   1e-34
6F2R-T nrPDB                                                          114   2e-26

Sequences not found previously or not previously below threshold:

4ZJA-A nrPDB                                                           36   0.007
3W1Z-A nrPDB                                                           32   0.086
4PIQ-A nrPDB                                                           30   0.36 
2BA1-H nrPDB                                                           29   0.87 
3MSU-A nrPDB                                                           29   1.0  
3QFW-A nrPDB                                                           29   1.5  
4B2G-A nrPDB                                                           28   1.9  
2R3S-A nrPDB                                                           28   2.1  
6CGV-M nrPDB                                                           27   3.6  


CONVERGED!
>5LTW-C nrPDB
          Length = 149

 Score =  210 bits (535), Expect = 2e-55,   Method: Composition-based stats.
 Identities = 149/149 (100%), Positives = 149/149 (100%)

Query: 1   MEIPVPVQPSWLRRASAPLPGLSAPGRLFDQRFGEGLLEAELAALCPTTLAPYYLRAPSV 60
           MEIPVPVQPSWLRRASAPLPGLSAPGRLFDQRFGEGLLEAELAALCPTTLAPYYLRAPSV
Sbjct: 1   MEIPVPVQPSWLRRASAPLPGLSAPGRLFDQRFGEGLLEAELAALCPTTLAPYYLRAPSV 60

Query: 61  ALPVAQVPTDPGHFSVLLDVKHFSPEEIAVKVVGEHVEVHARHEERPDEHGFVAREFHRR 120
           ALPVAQVPTDPGHFSVLLDVKHFSPEEIAVKVVGEHVEVHARHEERPDEHGFVAREFHRR
Sbjct: 61  ALPVAQVPTDPGHFSVLLDVKHFSPEEIAVKVVGEHVEVHARHEERPDEHGFVAREFHRR 120

Query: 121 YRLPPGVDPAAVTSALSPEGVLSIQAAPA 149
           YRLPPGVDPAAVTSALSPEGVLSIQAAPA
Sbjct: 121 YRLPPGVDPAAVTSALSPEGVLSIQAAPA 149


>2KLR-A nrPDB
          Length = 175

 Score =  206 bits (524), Expect = 4e-54,   Method: Composition-based stats.
 Identities = 73/159 (45%), Positives = 102/159 (64%), Gaps = 11/159 (6%)

Query: 3   IPVPVQPSWLRRASAPLPGLSAPGRLFDQRFGEGLLEAELAALCPTTLAPYYLRAPSV-- 60
           + + +   W+RR   P     +P RLFDQ FGE LLE++L     T+L+P+YLR PS   
Sbjct: 1   MDIAIHHPWIRRPFFPF---HSPSRLFDQFFGEHLLESDLFPTS-TSLSPFYLRPPSFLR 56

Query: 61  -----ALPVAQVPTDPGHFSVLLDVKHFSPEEIAVKVVGEHVEVHARHEERPDEHGFVAR 115
                   ++++  +   FSV LDVKHFSPEE+ VKV+G+ +EVH +HEER DEHGF++R
Sbjct: 57  APSWFDTGLSEMRLEKDRFSVNLDVKHFSPEELKVKVLGDVIEVHGKHEERQDEHGFISR 116

Query: 116 EFHRRYRLPPGVDPAAVTSALSPEGVLSIQAAPASAQAP 154
           EFHR+YR+P  VDP  +TS+LS +GVL++         P
Sbjct: 117 EFHRKYRIPADVDPLTITSSLSSDGVLTVNGPRKQVSGP 155


>6F2R-D nrPDB
          Length = 182

 Score =  176 bits (447), Expect = 3e-45,   Method: Composition-based stats.
 Identities = 57/133 (42%), Positives = 77/133 (57%), Gaps = 8/133 (6%)

Query: 22  LSAPGRLFDQRFGEGLLEAELAALCPTTLAPYYLRA------PSVALPVAQVPTDPGHFS 75
            + P RL +QRFGEGLL  E+  L PT    YY+R              +++    G F 
Sbjct: 18  FANPSRLGEQRFGEGLLPEEI--LTPTLYHGYYVRPRAAPAGEGSRAGASELRLSEGKFQ 75

Query: 76  VLLDVKHFSPEEIAVKVVGEHVEVHARHEERPDEHGFVAREFHRRYRLPPGVDPAAVTSA 135
             LDV HF+P+E+ V+ V   +EV ARH +R D HGFV+REF R Y LP  VDP  V +A
Sbjct: 76  AFLDVSHFTPDEVTVRTVDNLLEVSARHPQRLDRHGFVSREFCRTYVLPADVDPWRVRAA 135

Query: 136 LSPEGVLSIQAAP 148
           LS +G+L+++A  
Sbjct: 136 LSHDGILNLEAPR 148


>6F2R-C nrPDB
          Length = 203

 Score =  176 bits (447), Expect = 3e-45,   Method: Composition-based stats.
 Identities = 57/133 (42%), Positives = 77/133 (57%), Gaps = 8/133 (6%)

Query: 22  LSAPGRLFDQRFGEGLLEAELAALCPTTLAPYYLRA------PSVALPVAQVPTDPGHFS 75
            + P RL +QRFGEGLL  E+  L PT    YY+R              +++    G F 
Sbjct: 39  FANPSRLGEQRFGEGLLPEEI--LTPTLYHGYYVRPRAAPAGEGSRAGASELRLSEGKFQ 96

Query: 76  VLLDVKHFSPEEIAVKVVGEHVEVHARHEERPDEHGFVAREFHRRYRLPPGVDPAAVTSA 135
             LDV HF+P+E+ V+ V   +EV ARH +R D HGFV+REF R Y LP  VDP  V +A
Sbjct: 97  AFLDVSHFTPDEVTVRTVDNLLEVSARHPQRLDRHGFVSREFCRTYVLPADVDPWRVRAA 156

Query: 136 LSPEGVLSIQAAP 148
           LS +G+L+++A  
Sbjct: 157 LSHDGILNLEAPR 169


>4YDZ-A nrPDB
          Length = 159

 Score =  141 bits (355), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 38/127 (29%), Positives = 59/127 (46%), Gaps = 21/127 (16%)

Query: 42  LAALCPTT------------LAPYYLRAPS--------VALPVAQVPTDPGHFSVLLDVK 81
           +++LCP T            + PY+ +  S        V   + +V      F V LDV 
Sbjct: 1   MSSLCPYTGRPTGLFRDFEDMMPYWAQRHSMLNNFNNIVPQQLNEVENTAQKFCVKLDVA 60

Query: 82  HFSPEEIAVKVVGEHVEVHARHEERPDEHGFVAREFHRRYRLPPGVDPAAVTSALSPEGV 141
            F PEE+ V + G  + +   HE +  EHGF  R F R++ LP  VD A + + ++ EG 
Sbjct: 61  AFKPEELKVNLEGHVLTIEGHHEVKT-EHGFSKRSFTRQFTLPKDVDLAHIHTVINKEGQ 119

Query: 142 LSIQAAP 148
           ++I A  
Sbjct: 120 MTIDAPK 126


>6F2R-T nrPDB
          Length = 161

 Score =  114 bits (286), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 32/93 (34%), Positives = 54/93 (58%), Gaps = 1/93 (1%)

Query: 55  LRAPSVALPVAQVPTD-PGHFSVLLDVKHFSPEEIAVKVVGEHVEVHARHEERPDEHGFV 113
            ++P V       P +   HF +LLDV  F PE+I ++     + + A+H  R DEHGF+
Sbjct: 51  AQSPPVDSAAETPPREGKSHFQILLDVVQFLPEDIIIQTFEGWLLIKAQHGTRMDEHGFI 110

Query: 114 AREFHRRYRLPPGVDPAAVTSALSPEGVLSIQA 146
           +R F R+Y+LP GV+   +++ L  +G+L ++ 
Sbjct: 111 SRSFTRQYKLPDGVEIKDLSAVLCHDGILVVEV 143


>4ZJA-A nrPDB
          Length = 147

 Score = 35.8 bits (81), Expect = 0.007,   Method: Composition-based stats.
 Identities = 32/151 (21%), Positives = 58/151 (38%), Gaps = 23/151 (15%)

Query: 14  RASAPLPGLSAPGRLFDQRFGE-GLLEAELAALCPTTLAPYYLRAPSVALPVAQVPTDPG 72
           R  + LP  +    LF  RF     L ++L    P    P Y       L       D  
Sbjct: 5   RTLSALPVFAD--SLFSDRFNRIDRLFSQLTGDTPVAATPAY------DLQ----KRDAN 52

Query: 73  HFSVLLDVKHFSPEEIAVKVVGEHVEVHARHEERPDE-------HGFVAREFHRRYRLPP 125
           ++ + + V  +  EE+ ++ VG ++ +  +H E   E        G    +F   + LP 
Sbjct: 53  NYLLTVSVPGWKEEELEIETVGGNLNITGKHTEETVEDQTHWIYRGIRKADFQLSFSLP- 111

Query: 126 GVDPAAVTSALSPEGVLSIQAAPASAQAPPP 156
             + A V +A   +G+L ++      ++  P
Sbjct: 112 --EHAKVNNAKLEQGLLLVEIYQEIPESEKP 140


>3W1Z-A nrPDB
          Length = 143

 Score = 32.4 bits (72), Expect = 0.086,   Method: Composition-based stats.
 Identities = 16/106 (15%), Positives = 34/106 (32%), Gaps = 10/106 (9%)

Query: 56  RAPSVALPVAQVPTDPGHFSVLLDVKHFSPEEIAVKVVGEHVEVHA------RHEERPDE 109
           + P    P   V       SV +++     E++ V      + +        ++E     
Sbjct: 30  QIPGELSPSIDVHEGKDTVSVDVELPGVKKEDVQVHYDSGKLTISGEVVNERKNESTEGN 89

Query: 110 HGFVAR---EFHRRYRLPPGVDPAAVTSALSPEGVLSIQAAPASAQ 152
             +  R    F R   +P  +D   + +  S  G+L++        
Sbjct: 90  QRWSERRFGSFSRTITIPAKIDADRIEANFS-NGLLTVTLPKVEKS 134


>4PIQ-A nrPDB
          Length = 204

 Score = 30.5 bits (67), Expect = 0.36,   Method: Composition-based stats.
 Identities = 15/51 (29%), Positives = 21/51 (41%)

Query: 108 DEHGFVAREFHRRYRLPPGVDPAAVTSALSPEGVLSIQAAPASAQAPPPAA 158
           D  GF  R   + Y             ALSP+  LS++ +  + Q P  AA
Sbjct: 71  DPFGFSDRRLKQIYSFEYEAMLRRSALALSPDRCLSLEQSTQTVQGPDSAA 121


>2BA1-H nrPDB
          Length = 259

 Score = 29.3 bits (64), Expect = 0.87,   Method: Composition-based stats.
 Identities = 17/72 (23%), Positives = 29/72 (40%), Gaps = 2/72 (2%)

Query: 85  PEEIAVKVVGEHVEVHARHEERPDEHGFVAREFHRRYRLPPGVDPAAVTSALSPEGVLSI 144
           PE+I V +  ++V    R  ER D  GF   EF +   +P  ++ A  ++ +       +
Sbjct: 2   PEDILVDIKRDYVLSKLRDNERIDGRGF--DEFRKVEIIPNVIEKAEGSALVKLGDTQVV 59

Query: 145 QAAPASAQAPPP 156
                    P P
Sbjct: 60  VGVKMQPGEPYP 71


>3MSU-A nrPDB
          Length = 427

 Score = 28.9 bits (63), Expect = 1.0,   Method: Composition-based stats.
 Identities = 8/32 (25%), Positives = 18/32 (56%)

Query: 74  FSVLLDVKHFSPEEIAVKVVGEHVEVHARHEE 105
           + +  D + + P+E+ +K +     +HA HE+
Sbjct: 205 YMMFADDESYKPDELHIKAMDTIFMLHADHEQ 236


>3QFW-A nrPDB
          Length = 378

 Score = 28.5 bits (62), Expect = 1.5,   Method: Composition-based stats.
 Identities = 24/111 (21%), Positives = 45/111 (40%), Gaps = 6/111 (5%)

Query: 12  LRRASAPLPGLSAPGRLFDQRFGEGLLEAELAALCPTTLAPYYLRAPSVA-LPVAQVPTD 70
           +R   A     + PG+L +  FG   ++ ++ AL    L  +YL A     + +A + T 
Sbjct: 67  VRIGLAAATAPAEPGQLLNMLFGNSSIQPDI-ALADVELPAHYLTAFGGPRVGLAGIRTL 125

Query: 71  PGHFSVLLDVKHFSPEEI---AVKVVGEHVEVHARHEERPDEHGFVAREFH 118
            G  S  L      P+ +   A+  +   + +      + D+HG   + F 
Sbjct: 126 TGAQSRALTASALKPQGLSPAALASIAHQLALGGVDLIK-DDHGLADQAFS 175


>4B2G-A nrPDB
          Length = 609

 Score = 28.1 bits (61), Expect = 1.9,   Method: Composition-based stats.
 Identities = 19/98 (19%), Positives = 32/98 (32%), Gaps = 12/98 (12%)

Query: 30  DQRFGEGLLEAELAALCPTTLAPYYLRAPSVALPVAQVPTDPGHFSVLLDVKHF---SPE 86
           +  FG  L      +    T+ P       +    + +P        L+D+ H       
Sbjct: 340 ECYFGLNLNPMSKPSEVSYTIMPNMAYFEFLPHEHSSIPLSRDSPPRLVDLAHVEVGKEY 399

Query: 87  EIAVKV--------VGEHVEVHARHEERPDEHGFVARE 116
           E+ +          VG+ + V   H   P  H FV R+
Sbjct: 400 ELVITTYAGLYRYRVGDILRVTGFHNSAPQFH-FVRRK 436


>2R3S-A nrPDB
          Length = 335

 Score = 27.8 bits (60), Expect = 2.1,   Method: Composition-based stats.
 Identities = 11/34 (32%), Positives = 17/34 (50%)

Query: 6   PVQPSWLRRASAPLPGLSAPGRLFDQRFGEGLLE 39
           P  P W++ A A  P ++ P +L  Q   E  +E
Sbjct: 132 PEHPVWVQFAKAMSPMMANPAQLIAQLVNENKIE 165


>6CGV-M nrPDB
          Length = 585

 Score = 27.0 bits (58), Expect = 3.6,   Method: Composition-based stats.
 Identities = 30/142 (21%), Positives = 42/142 (29%), Gaps = 29/142 (20%)

Query: 20  PGLSAPGRLFDQRFGEGLLEAELAA---LCPTTLAPYYLRAPSVALPVAQVPTDPGHFSV 76
           PG+ A  R F  R  + L  A            L P++L  P       +VP     F  
Sbjct: 353 PGMYASNRPFINRLMDYLHRAAAVNPEYFTNAILNPHWLPPPGFYTGGFEVPEGNDGFLW 412

Query: 77  -LLDVKHFSPEEIAVKVVGEHVEVHARHEERPDEHGFVAREFHRRYRLPPGVDPAAVTSA 135
             +D   FSP+          +E+  R      E       F R   L            
Sbjct: 413 DDIDDSVFSPQPQT------LLELQQR---EQAEAALRKESFRRPSSLSD---------- 453

Query: 136 LSPEGVLSIQAAPASAQAPPPA 157
                 L   A  + A +P P+
Sbjct: 454 ------LGAAAPRSDASSPFPS 469


  Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta
    Posted date:  Jan 3, 2023  9:05 PM
  Number of letters in database: 10,336,785
  Number of sequences in database:  36,641
  
Lambda     K      H
   0.305    0.131    0.358 

Lambda     K      H
   0.267   0.0387    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,193,847
Number of Sequences: 36641
Number of extensions: 223099
Number of successful extensions: 729
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 18
Number of HSP's that attempted gapping in prelim test: 690
Number of HSP's gapped (non-prelim): 43
length of query: 160
length of database: 10,336,785
effective HSP length: 89
effective length of query: 71
effective length of database: 7,075,736
effective search space: 502377256
effective search space used: 502377256
T: 11
A: 40
X1: 16 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.0 bits)
S2: 55 (25.9 bits)