BLASTP 2.2.23 [Feb-03-2010] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= O13034 (530 letters) Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta 36,641 sequences; 10,336,785 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value 6DBW-B nrPDB 1095 0.0 6CIJ-D nrPDB 551 e-157 5ZDZ-B nrPDB 413 e-115 4WWX-X nrPDB 399 e-111 2V83-A nrPDB 99 6e-21 4BXZ-X nrPDB 31 1.2 3AX6-A nrPDB 30 1.8 5GQ0-B nrPDB 30 1.9 4GOP-C nrPDB 28 8.0 2C7S-A nrPDB 28 9.5 >6DBW-B nrPDB Length = 533 Score = 1095 bits (2831), Expect = 0.0, Method: Compositional matrix adjust. Identities = 528/530 (99%), Positives = 528/530 (99%) Query: 1 MSLQPLTAVNCGSLVQPGFSLLDLEGDVYLFGQKGWPKRSCPTGIFGVRIKKGELKLRAI 60 MSLQPLTAVNCGSLVQPGFSLLDLEGDVYLFGQKGWPKRSCPTGIFGVRIKKGELKLRAI Sbjct: 4 MSLQPLTAVNCGSLVQPGFSLLDLEGDVYLFGQKGWPKRSCPTGIFGVRIKKGELKLRAI 63 Query: 61 SFSNNSSYLPPLRCPAIAHFEAQDGKPECYLIHGGRTPNNELSSSLYMLSVDSRGCNRKV 120 SFSNNSSYLPPLRCPAIAHFEAQDGKPECYLIHGGRTPNNELSSSLYMLSVDSRGCNRKV Sbjct: 64 SFSNNSSYLPPLRCPAIAHFEAQDGKPECYLIHGGRTPNNELSSSLYMLSVDSRGCNRKV 123 Query: 121 TLRCEEKELVGDVPSARYGHTLSVINSRGKTACVLFGGRSYMPPTERTTQNWNSVGDCPP 180 TLRCEEKELVGDVPSARYGHTLSVINSRGKTACVLFGGRSYMPPTERTTQNWNSV DCPP Sbjct: 124 TLRCEEKELVGDVPSARYGHTLSVINSRGKTACVLFGGRSYMPPTERTTQNWNSVVDCPP 183 Query: 181 QVYLIDLEFGCCTAHTLPELTDGQSFHVALARQDCVYFLGGHILSSDCRPSRLIRLHVEL 240 QVYLIDLEFGCCTAHTLPELTDGQSFHVALARQDCVYFLGGHILSSDCRPSRLIRLHVEL Sbjct: 184 QVYLIDLEFGCCTAHTLPELTDGQSFHVALARQDCVYFLGGHILSSDCRPSRLIRLHVEL 243 Query: 241 LLGSPVLTCTILHEGLTITSAIASPIGYHEYIIFGGYQSETQKRMECTYVGLDDVGVHME 300 LLGSPVLTCTILHEGLTITSAIASPIGYHEYIIFGGYQSETQKRMECTYVGLDDVGVHME Sbjct: 244 LLGSPVLTCTILHEGLTITSAIASPIGYHEYIIFGGYQSETQKRMECTYVGLDDVGVHME 303 Query: 301 SREPPQWTSEISHSRTWFGGSLGKGTALVAIPSEGNPTPPEAYHFYQVSFQKEQDGEATA 360 SREPPQWTSEISHSRTWFGGSLGKGTALVAIPSEGNPTPPEAYHFYQVSFQKEQDGEATA Sbjct: 304 SREPPQWTSEISHSRTWFGGSLGKGTALVAIPSEGNPTPPEAYHFYQVSFQKEQDGEATA 363 Query: 361 QGCSQESTDFEDSAPLEDSEELYFGREPHELEYSSDVEGDTYNEEDEEDESQTGYWIKCC 420 QG SQESTDFEDSAPLEDSEELYFGREPHELEYSSDVEGDTYNEEDEEDESQTGYWIKCC Sbjct: 364 QGGSQESTDFEDSAPLEDSEELYFGREPHELEYSSDVEGDTYNEEDEEDESQTGYWIKCC 423 Query: 421 LSCQVDPNIWEPYYSTELTRPAMIFCSRGEGGHWVHAQCMELPESLLLQLSQDNSKYFCL 480 LSCQVDPNIWEPYYSTELTRPAMIFCSRGEGGHWVHAQCMELPESLLLQLSQDNSKYFCL Sbjct: 424 LSCQVDPNIWEPYYSTELTRPAMIFCSRGEGGHWVHAQCMELPESLLLQLSQDNSKYFCL 483 Query: 481 DHGGLPKQEMTPPKQMLPVKRVPMKMTHRKAPVSLKMTPAKKTFLRRLFD 530 DHGGLPKQEMTPPKQMLPVKRVPMKMTHRKAPVSLKMTPAKKTFLRRLFD Sbjct: 484 DHGGLPKQEMTPPKQMLPVKRVPMKMTHRKAPVSLKMTPAKKTFLRRLFD 533 >6CIJ-D nrPDB Length = 520 Score = 551 bits (1421), Expect = e-157, Method: Compositional matrix adjust. Identities = 271/526 (51%), Positives = 358/526 (68%), Gaps = 9/526 (1%) Query: 1 MSLQPLTAVNCGSLVQPGFSLLDLEGDVYLFGQKGWPKRSCPTGIFGVRIKKGELKLRAI 60 MSLQ +T + +L+QPGFSL++ +G V+ FGQKGWPKRSCPTG+F IK+ LKL+ Sbjct: 1 MSLQMVTVGHNIALIQPGFSLMNFDGQVFFFGQKGWPKRSCPTGVFHFDIKQNHLKLKPA 60 Query: 61 SFSNNSSYLPPLRCPAIAHFEAQ-DGKPECYLIHGGRTPNNELSSSLYMLSVDSRGCNRK 119 FS +S YLPPLR PA ++ D Y+IHGG+TPNNELS +Y++SV + N+K Sbjct: 61 IFSKDSCYLPPLRYPATCSYKGSIDSDKHQYIIHGGKTPNNELSDKIYIMSVACKN-NKK 119 Query: 120 VTLRCEEKELVGDVPSARYGHTLSVINSRGKTACVLFGGRSYMPPTERTTQNWNSVGDCP 179 VT RC EK+LVGDVP RYGH++ V+ SRGK+ VLFGGRSYMP T+RTT+ WNSV DC Sbjct: 120 VTFRCTEKDLVGDVPEPRYGHSIDVVYSRGKSMGVLFGGRSYMPSTQRTTEKWNSVADCL 179 Query: 180 PQVYLIDLEFGCCTAHTLPELTDGQSFHVALARQDCVYFLGGHILSSDCRPSRLIRLHVE 239 P V+LID EFGC T++ LPEL DG SFHV++AR D VY LGGH L+S+ RP+ L R+ V+ Sbjct: 180 PHVFLIDFEFGCATSYILPELQDGLSFHVSIARNDTVYILGGHSLASNIRPANLYRIRVD 239 Query: 240 LLLGSPVLTCTILHEGLTITSAIASPIGYHEYIIFGGYQSETQKRMECTYVGLDDVGVHM 299 L LG+P + CT+L G++++SAI + E++I GGYQ E QKRM C+ V L D + + Sbjct: 240 LPLGTPAVNCTVLPGGISVSSAILTQTNNDEFVIVGGYQLENQKRMVCSLVSLGDNTIEI 299 Query: 300 ESREPPQWTSEISHSRTWFGGSLGKGTALVAIPSEGNPTPPEAYHFYQVSFQKEQDGE-A 358 E P WTS+I HS+ WFG ++G GT + IP + EA++FY + +E E Sbjct: 300 SEMETPDWTSDIKHSKIWFGSNMGNGTIFLGIPGDNKQAMSEAFYFYTLRCSEEDLSEDQ 359 Query: 359 TAQGCSQEST-DFEDSAPLEDSEELYFGREPHELEYSSDVEGDTYNEEDEEDESQTGYWI 417 SQ ST D DS P EDSEE F E + D E DTYNE+DE+DES TGYWI Sbjct: 360 KIVSNSQTSTEDPGDSTPFEDSEEFCFSAE--ATSFDGDDEFDTYNEDDEDDESVTGYWI 417 Query: 418 KCCLSCQVDPNIWEPYYSTELTRPAMIFCSRGEGGHWVHAQCMELPESLLLQLSQDNSKY 477 CC +C VD N W P+YSTEL +PAMI+CS G+ GHWVHAQCM+L E L+ LS+ ++KY Sbjct: 418 TCCPTCDVDINTWVPFYSTELNKPAMIYCSHGD-GHWVHAQCMDLEERTLIHLSEGSNKY 476 Query: 478 FCLDHGGLPKQEMTPPKQMLPVKRVPMKMTHRKAPVSLKMTPAKKT 523 +C +H + + + PK+ P+++ PMK H+K + +TPAKK+ Sbjct: 477 YCNEHVQIARA-LQAPKRNPPLQKPPMKSLHKKGSGKV-LTPAKKS 520 >5ZDZ-B nrPDB Length = 389 Score = 413 bits (1061), Expect = e-115, Method: Compositional matrix adjust. Identities = 201/387 (51%), Positives = 263/387 (67%), Gaps = 4/387 (1%) Query: 1 MSLQPLTAVNCGSLVQPGFSLLDLEGDVYLFGQKGWPKRSCPTGIFGVRIKKGELKLRAI 60 +SLQ +T + +L+QPGFSL++ +G V+ FGQKGWPKRSCPTG+F IK+ LKL+ Sbjct: 3 VSLQMVTVGHNIALIQPGFSLMNFDGQVFFFGQKGWPKRSCPTGVFHFDIKQNHLKLKPA 62 Query: 61 SFSNNSSYLPPLRCPAIAHFEAQ-DGKPECYLIHGGRTPNNELSSSLYMLSVDSRGCNRK 119 FS +S YLPPLR PA ++ D Y+IHGG+TPNNELS +Y++SV + N+K Sbjct: 63 IFSKDSCYLPPLRYPATCSYKGSIDSDKHQYIIHGGKTPNNELSDKIYIMSVACKN-NKK 121 Query: 120 VTLRCEEKELVGDVPSARYGHTLSVINSRGKTACVLFGGRSYMPPTERTTQNWNSVGDCP 179 VT RC EK+LVGDVP RYGH++ V+ SRGK+ VLFGGRSYMP T+RTT+ WNSV DC Sbjct: 122 VTFRCTEKDLVGDVPEPRYGHSIDVVYSRGKSMGVLFGGRSYMPSTQRTTEKWNSVADCL 181 Query: 180 PQVYLIDLEFGCCTAHTLPELTDGQSFHVALARQDCVYFLGGHILSSDCRPSRLIRLHVE 239 P V+LID EFGC T++ LPEL DG SFHV++AR D VY LGGH L+S+ RP+ L R+ V+ Sbjct: 182 PHVFLIDFEFGCATSYILPELQDGLSFHVSIARNDTVYILGGHSLASNIRPANLYRIRVD 241 Query: 240 LLLGSPVLTCTILHEGLTITSAIASPIGYHEYIIFGGYQSETQKRMECTYVGLDDVGVHM 299 L LG+P + CT+L G++++SAI + E++I GGYQ E QKRM C+ V L D + + Sbjct: 242 LPLGTPAVNCTVLPGGISVSSAILTQTNNDEFVIVGGYQLENQKRMVCSLVSLGDNTIEI 301 Query: 300 ESREPPQWTSEISHSRTWFGGSLGKGTALVAIPSEGNPTPPEAYHFYQVSFQKEQDGE-A 358 E P WTS+I HS+ WFG ++G GT + IP + EA++FY + +E E Sbjct: 302 SEMETPDWTSDIKHSKIWFGSNMGNGTIFLGIPGDNKQAMSEAFYFYTLRCSEEDLSEDQ 361 Query: 359 TAQGCSQEST-DFEDSAPLEDSEELYF 384 SQ ST D DS P EDSEE F Sbjct: 362 KIVSNSQTSTEDPGDSTPFEDSEEFCF 388 >4WWX-X nrPDB Length = 349 Score = 399 bits (1025), Expect = e-111, Method: Compositional matrix adjust. Identities = 185/348 (53%), Positives = 245/348 (70%), Gaps = 2/348 (0%) Query: 2 SLQPLTAVNCGSLVQPGFSLLDLEGDVYLFGQKGWPKRSCPTGIFGVRIKKGELKLRAIS 61 SLQ +T + +L+QPGFSL++ +G V+ FGQKGWPKRSCPTG+F IK+ LKL+ Sbjct: 1 SLQMVTVGHNIALIQPGFSLMNFDGQVFFFGQKGWPKRSCPTGVFHFDIKQNHLKLKPAI 60 Query: 62 FSNNSSYLPPLRCPAIAHFEAQ-DGKPECYLIHGGRTPNNELSSSLYMLSVDSRGCNRKV 120 FS +S YLPPLR PA ++ D Y+IHGG+TPNNELS +Y++SV + N+KV Sbjct: 61 FSKDSCYLPPLRYPATCSYKGSIDSDKHQYIIHGGKTPNNELSDKIYIMSVACKN-NKKV 119 Query: 121 TLRCEEKELVGDVPSARYGHTLSVINSRGKTACVLFGGRSYMPPTERTTQNWNSVGDCPP 180 T RC EK+LVGDVP RYGH++ V+ SRGK+ VLFGGRSYMP T+RTT+ WNSV DC P Sbjct: 120 TFRCTEKDLVGDVPEPRYGHSIDVVYSRGKSMGVLFGGRSYMPSTQRTTEKWNSVADCLP 179 Query: 181 QVYLIDLEFGCCTAHTLPELTDGQSFHVALARQDCVYFLGGHILSSDCRPSRLIRLHVEL 240 V+LID EFGC T++ LPEL DG SFHV++AR D VY LGGH L+S+ RP+ L R+ V+L Sbjct: 180 HVFLIDFEFGCATSYILPELQDGLSFHVSIARNDTVYILGGHSLASNIRPANLYRIRVDL 239 Query: 241 LLGSPVLTCTILHEGLTITSAIASPIGYHEYIIFGGYQSETQKRMECTYVGLDDVGVHME 300 LG+P + CT+L G++++SAI + E++I GGYQ E QKRM C+ V L D + + Sbjct: 240 PLGTPAVNCTVLPGGISVSSAILTQTNNDEFVIVGGYQLENQKRMVCSLVSLGDNTIEIS 299 Query: 301 SREPPQWTSEISHSRTWFGGSLGKGTALVAIPSEGNPTPPEAYHFYQV 348 E P WTS+I HS+ WFG ++G GT + IP + EA++FY + Sbjct: 300 EMETPDWTSDIKHSKIWFGSNMGNGTIFLGIPGDNKQAMSEAFYFYTL 347 >2V83-A nrPDB Length = 82 Score = 98.6 bits (244), Expect = 6e-21, Method: Compositional matrix adjust. Identities = 42/71 (59%), Positives = 55/71 (77%), Gaps = 1/71 (1%) Query: 412 QTGYWIKCCLSCQVDPNIWEPYYSTELTRPAMIFCSRGEGGHWVHAQCMELPESLLLQLS 471 + GYWI CC +C VD N W P+YSTEL +PAMI+CS G+ GHWVHAQCM+L E L+ LS Sbjct: 7 EFGYWITCCPTCDVDINTWVPFYSTELNKPAMIYCSHGD-GHWVHAQCMDLEERTLIHLS 65 Query: 472 QDNSKYFCLDH 482 + ++KY+C +H Sbjct: 66 EGSNKYYCNEH 76 >4BXZ-X nrPDB Length = 594 Score = 31.2 bits (69), Expect = 1.2, Method: Compositional matrix adjust. Identities = 21/74 (28%), Positives = 34/74 (45%), Gaps = 8/74 (10%) Query: 406 DEEDESQTGYWIKCCLSCQVDPNIWEPYYSTELTRPAMIFCSRGEGGHWVHAQCMELPES 465 DE DE+ GY ++C E Y + E + M+ C + W H +CM + Sbjct: 63 DEVDEADEGY-VRCLCGAN-----NENYDAAEYSHGDMVQCDGCDT--WQHIKCMTDGKD 114 Query: 466 LLLQLSQDNSKYFC 479 + L ++SKY+C Sbjct: 115 TIDGLMSEDSKYYC 128 >3AX6-A nrPDB Length = 380 Score = 30.4 bits (67), Expect = 1.8, Method: Compositional matrix adjust. Identities = 18/59 (30%), Positives = 31/59 (52%), Gaps = 4/59 (6%) Query: 415 YWIKCCLSCQVDPNIWE----PYYSTELTRPAMIFCSRGEGGHWVHAQCMELPESLLLQ 469 Y I+ C++ Q + +I P STEL PA++ GE G++ + L E+L ++ Sbjct: 268 YTIEACVTSQFEQHIRAIMNLPLGSTELLIPAVMVNLLGEEGYYGKPALIGLEEALAIE 326 >5GQ0-B nrPDB Length = 349 Score = 30.4 bits (67), Expect = 1.9, Method: Compositional matrix adjust. Identities = 14/30 (46%), Positives = 19/30 (63%), Gaps = 1/30 (3%) Query: 84 DGKPECYLIHGGRTPNNELSSSLYMLSVDS 113 DGK L+HGG+ P NE + LY +V+S Sbjct: 312 DGK-NGLLMHGGKLPTNERTDDLYFYAVNS 340 >4GOP-C nrPDB Length = 444 Score = 28.5 bits (62), Expect = 8.0, Method: Compositional matrix adjust. Identities = 17/52 (32%), Positives = 27/52 (51%), Gaps = 6/52 (11%) Query: 105 SLYMLSVDSRGCNRKVTL------RCEEKELVGDVPSARYGHTLSVINSRGK 150 +LY + S GCN+KV L RCE+ + P RY + +V ++ G+ Sbjct: 305 NLYYTACASEGCNKKVNLDHENNWRCEKCDRSYATPEYRYILSTNVADATGQ 356 >2C7S-A nrPDB Length = 313 Score = 28.1 bits (61), Expect = 9.5, Method: Compositional matrix adjust. Identities = 24/97 (24%), Positives = 40/97 (41%), Gaps = 21/97 (21%) Query: 1 MSLQPLT--AVNCGSLVQPGFSLLDLEGDVYLFGQKGWPKRSCP---TGIFGVRIKKGEL 55 + ++PL V +L + G++ + +V F GWP P TG+ Sbjct: 173 VEMEPLAEYVVRTFTLERRGYNEIR---EVKQFHFTGWPDHGVPYHATGLLSF------- 222 Query: 56 KLRAISFSNNSSYLPPLRCPAIAHFEAQDGKPECYLI 92 +R + SN PP P + H A G+ CY++ Sbjct: 223 -IRRVKLSN-----PPSAGPIVVHCSAGAGRTGCYIV 253 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: 6DBW-B nrPDB 1002 0.0 6CIJ-D nrPDB 964 0.0 5ZDZ-B nrPDB 729 0.0 4WWX-X nrPDB 684 0.0 2V83-A nrPDB 155 5e-38 Sequences not found previously or not previously below threshold: 4BXZ-X nrPDB 35 0.062 4GOP-C nrPDB 33 0.30 4Z3X-A nrPDB 32 0.76 5GQ0-B nrPDB 32 0.98 6BRO-B nrPDB 30 3.5 5HZG-B nrPDB 29 4.1 CONVERGED! >6DBW-B nrPDB Length = 533 Score = 1002 bits (2590), Expect = 0.0, Method: Composition-based stats. Identities = 528/530 (99%), Positives = 528/530 (99%) Query: 1 MSLQPLTAVNCGSLVQPGFSLLDLEGDVYLFGQKGWPKRSCPTGIFGVRIKKGELKLRAI 60 MSLQPLTAVNCGSLVQPGFSLLDLEGDVYLFGQKGWPKRSCPTGIFGVRIKKGELKLRAI Sbjct: 4 MSLQPLTAVNCGSLVQPGFSLLDLEGDVYLFGQKGWPKRSCPTGIFGVRIKKGELKLRAI 63 Query: 61 SFSNNSSYLPPLRCPAIAHFEAQDGKPECYLIHGGRTPNNELSSSLYMLSVDSRGCNRKV 120 SFSNNSSYLPPLRCPAIAHFEAQDGKPECYLIHGGRTPNNELSSSLYMLSVDSRGCNRKV Sbjct: 64 SFSNNSSYLPPLRCPAIAHFEAQDGKPECYLIHGGRTPNNELSSSLYMLSVDSRGCNRKV 123 Query: 121 TLRCEEKELVGDVPSARYGHTLSVINSRGKTACVLFGGRSYMPPTERTTQNWNSVGDCPP 180 TLRCEEKELVGDVPSARYGHTLSVINSRGKTACVLFGGRSYMPPTERTTQNWNSV DCPP Sbjct: 124 TLRCEEKELVGDVPSARYGHTLSVINSRGKTACVLFGGRSYMPPTERTTQNWNSVVDCPP 183 Query: 181 QVYLIDLEFGCCTAHTLPELTDGQSFHVALARQDCVYFLGGHILSSDCRPSRLIRLHVEL 240 QVYLIDLEFGCCTAHTLPELTDGQSFHVALARQDCVYFLGGHILSSDCRPSRLIRLHVEL Sbjct: 184 QVYLIDLEFGCCTAHTLPELTDGQSFHVALARQDCVYFLGGHILSSDCRPSRLIRLHVEL 243 Query: 241 LLGSPVLTCTILHEGLTITSAIASPIGYHEYIIFGGYQSETQKRMECTYVGLDDVGVHME 300 LLGSPVLTCTILHEGLTITSAIASPIGYHEYIIFGGYQSETQKRMECTYVGLDDVGVHME Sbjct: 244 LLGSPVLTCTILHEGLTITSAIASPIGYHEYIIFGGYQSETQKRMECTYVGLDDVGVHME 303 Query: 301 SREPPQWTSEISHSRTWFGGSLGKGTALVAIPSEGNPTPPEAYHFYQVSFQKEQDGEATA 360 SREPPQWTSEISHSRTWFGGSLGKGTALVAIPSEGNPTPPEAYHFYQVSFQKEQDGEATA Sbjct: 304 SREPPQWTSEISHSRTWFGGSLGKGTALVAIPSEGNPTPPEAYHFYQVSFQKEQDGEATA 363 Query: 361 QGCSQESTDFEDSAPLEDSEELYFGREPHELEYSSDVEGDTYNEEDEEDESQTGYWIKCC 420 QG SQESTDFEDSAPLEDSEELYFGREPHELEYSSDVEGDTYNEEDEEDESQTGYWIKCC Sbjct: 364 QGGSQESTDFEDSAPLEDSEELYFGREPHELEYSSDVEGDTYNEEDEEDESQTGYWIKCC 423 Query: 421 LSCQVDPNIWEPYYSTELTRPAMIFCSRGEGGHWVHAQCMELPESLLLQLSQDNSKYFCL 480 LSCQVDPNIWEPYYSTELTRPAMIFCSRGEGGHWVHAQCMELPESLLLQLSQDNSKYFCL Sbjct: 424 LSCQVDPNIWEPYYSTELTRPAMIFCSRGEGGHWVHAQCMELPESLLLQLSQDNSKYFCL 483 Query: 481 DHGGLPKQEMTPPKQMLPVKRVPMKMTHRKAPVSLKMTPAKKTFLRRLFD 530 DHGGLPKQEMTPPKQMLPVKRVPMKMTHRKAPVSLKMTPAKKTFLRRLFD Sbjct: 484 DHGGLPKQEMTPPKQMLPVKRVPMKMTHRKAPVSLKMTPAKKTFLRRLFD 533 >6CIJ-D nrPDB Length = 520 Score = 964 bits (2491), Expect = 0.0, Method: Composition-based stats. Identities = 271/526 (51%), Positives = 358/526 (68%), Gaps = 9/526 (1%) Query: 1 MSLQPLTAVNCGSLVQPGFSLLDLEGDVYLFGQKGWPKRSCPTGIFGVRIKKGELKLRAI 60 MSLQ +T + +L+QPGFSL++ +G V+ FGQKGWPKRSCPTG+F IK+ LKL+ Sbjct: 1 MSLQMVTVGHNIALIQPGFSLMNFDGQVFFFGQKGWPKRSCPTGVFHFDIKQNHLKLKPA 60 Query: 61 SFSNNSSYLPPLRCPAIAHFEAQ-DGKPECYLIHGGRTPNNELSSSLYMLSVDSRGCNRK 119 FS +S YLPPLR PA ++ D Y+IHGG+TPNNELS +Y++SV + N+K Sbjct: 61 IFSKDSCYLPPLRYPATCSYKGSIDSDKHQYIIHGGKTPNNELSDKIYIMSVACKN-NKK 119 Query: 120 VTLRCEEKELVGDVPSARYGHTLSVINSRGKTACVLFGGRSYMPPTERTTQNWNSVGDCP 179 VT RC EK+LVGDVP RYGH++ V+ SRGK+ VLFGGRSYMP T+RTT+ WNSV DC Sbjct: 120 VTFRCTEKDLVGDVPEPRYGHSIDVVYSRGKSMGVLFGGRSYMPSTQRTTEKWNSVADCL 179 Query: 180 PQVYLIDLEFGCCTAHTLPELTDGQSFHVALARQDCVYFLGGHILSSDCRPSRLIRLHVE 239 P V+LID EFGC T++ LPEL DG SFHV++AR D VY LGGH L+S+ RP+ L R+ V+ Sbjct: 180 PHVFLIDFEFGCATSYILPELQDGLSFHVSIARNDTVYILGGHSLASNIRPANLYRIRVD 239 Query: 240 LLLGSPVLTCTILHEGLTITSAIASPIGYHEYIIFGGYQSETQKRMECTYVGLDDVGVHM 299 L LG+P + CT+L G++++SAI + E++I GGYQ E QKRM C+ V L D + + Sbjct: 240 LPLGTPAVNCTVLPGGISVSSAILTQTNNDEFVIVGGYQLENQKRMVCSLVSLGDNTIEI 299 Query: 300 ESREPPQWTSEISHSRTWFGGSLGKGTALVAIPSEGNPTPPEAYHFYQVSFQKEQDGE-A 358 E P WTS+I HS+ WFG ++G GT + IP + EA++FY + +E E Sbjct: 300 SEMETPDWTSDIKHSKIWFGSNMGNGTIFLGIPGDNKQAMSEAFYFYTLRCSEEDLSEDQ 359 Query: 359 TAQGCSQEST-DFEDSAPLEDSEELYFGREPHELEYSSDVEGDTYNEEDEEDESQTGYWI 417 SQ ST D DS P EDSEE F E + D E DTYNE+DE+DES TGYWI Sbjct: 360 KIVSNSQTSTEDPGDSTPFEDSEEFCFSAE--ATSFDGDDEFDTYNEDDEDDESVTGYWI 417 Query: 418 KCCLSCQVDPNIWEPYYSTELTRPAMIFCSRGEGGHWVHAQCMELPESLLLQLSQDNSKY 477 CC +C VD N W P+YSTEL +PAMI+CS G+ GHWVHAQCM+L E L+ LS+ ++KY Sbjct: 418 TCCPTCDVDINTWVPFYSTELNKPAMIYCSHGD-GHWVHAQCMDLEERTLIHLSEGSNKY 476 Query: 478 FCLDHGGLPKQEMTPPKQMLPVKRVPMKMTHRKAPVSLKMTPAKKT 523 +C +H + + + PK+ P+++ PMK H+K + +TPAKK+ Sbjct: 477 YCNEHVQIARA-LQAPKRNPPLQKPPMKSLHKKGSGKV-LTPAKKS 520 >5ZDZ-B nrPDB Length = 389 Score = 729 bits (1883), Expect = 0.0, Method: Composition-based stats. Identities = 201/388 (51%), Positives = 263/388 (67%), Gaps = 4/388 (1%) Query: 1 MSLQPLTAVNCGSLVQPGFSLLDLEGDVYLFGQKGWPKRSCPTGIFGVRIKKGELKLRAI 60 +SLQ +T + +L+QPGFSL++ +G V+ FGQKGWPKRSCPTG+F IK+ LKL+ Sbjct: 3 VSLQMVTVGHNIALIQPGFSLMNFDGQVFFFGQKGWPKRSCPTGVFHFDIKQNHLKLKPA 62 Query: 61 SFSNNSSYLPPLRCPAIAHFEAQ-DGKPECYLIHGGRTPNNELSSSLYMLSVDSRGCNRK 119 FS +S YLPPLR PA ++ D Y+IHGG+TPNNELS +Y++SV + N+K Sbjct: 63 IFSKDSCYLPPLRYPATCSYKGSIDSDKHQYIIHGGKTPNNELSDKIYIMSVACKN-NKK 121 Query: 120 VTLRCEEKELVGDVPSARYGHTLSVINSRGKTACVLFGGRSYMPPTERTTQNWNSVGDCP 179 VT RC EK+LVGDVP RYGH++ V+ SRGK+ VLFGGRSYMP T+RTT+ WNSV DC Sbjct: 122 VTFRCTEKDLVGDVPEPRYGHSIDVVYSRGKSMGVLFGGRSYMPSTQRTTEKWNSVADCL 181 Query: 180 PQVYLIDLEFGCCTAHTLPELTDGQSFHVALARQDCVYFLGGHILSSDCRPSRLIRLHVE 239 P V+LID EFGC T++ LPEL DG SFHV++AR D VY LGGH L+S+ RP+ L R+ V+ Sbjct: 182 PHVFLIDFEFGCATSYILPELQDGLSFHVSIARNDTVYILGGHSLASNIRPANLYRIRVD 241 Query: 240 LLLGSPVLTCTILHEGLTITSAIASPIGYHEYIIFGGYQSETQKRMECTYVGLDDVGVHM 299 L LG+P + CT+L G++++SAI + E++I GGYQ E QKRM C+ V L D + + Sbjct: 242 LPLGTPAVNCTVLPGGISVSSAILTQTNNDEFVIVGGYQLENQKRMVCSLVSLGDNTIEI 301 Query: 300 ESREPPQWTSEISHSRTWFGGSLGKGTALVAIPSEGNPTPPEAYHFYQVSFQKEQDGE-A 358 E P WTS+I HS+ WFG ++G GT + IP + EA++FY + +E E Sbjct: 302 SEMETPDWTSDIKHSKIWFGSNMGNGTIFLGIPGDNKQAMSEAFYFYTLRCSEEDLSEDQ 361 Query: 359 TAQGCSQEST-DFEDSAPLEDSEELYFG 385 SQ ST D DS P EDSEE F Sbjct: 362 KIVSNSQTSTEDPGDSTPFEDSEEFCFS 389 >4WWX-X nrPDB Length = 349 Score = 684 bits (1764), Expect = 0.0, Method: Composition-based stats. Identities = 185/350 (52%), Positives = 245/350 (70%), Gaps = 2/350 (0%) Query: 2 SLQPLTAVNCGSLVQPGFSLLDLEGDVYLFGQKGWPKRSCPTGIFGVRIKKGELKLRAIS 61 SLQ +T + +L+QPGFSL++ +G V+ FGQKGWPKRSCPTG+F IK+ LKL+ Sbjct: 1 SLQMVTVGHNIALIQPGFSLMNFDGQVFFFGQKGWPKRSCPTGVFHFDIKQNHLKLKPAI 60 Query: 62 FSNNSSYLPPLRCPAIAHFEAQ-DGKPECYLIHGGRTPNNELSSSLYMLSVDSRGCNRKV 120 FS +S YLPPLR PA ++ D Y+IHGG+TPNNELS +Y++SV + N+KV Sbjct: 61 FSKDSCYLPPLRYPATCSYKGSIDSDKHQYIIHGGKTPNNELSDKIYIMSVACKN-NKKV 119 Query: 121 TLRCEEKELVGDVPSARYGHTLSVINSRGKTACVLFGGRSYMPPTERTTQNWNSVGDCPP 180 T RC EK+LVGDVP RYGH++ V+ SRGK+ VLFGGRSYMP T+RTT+ WNSV DC P Sbjct: 120 TFRCTEKDLVGDVPEPRYGHSIDVVYSRGKSMGVLFGGRSYMPSTQRTTEKWNSVADCLP 179 Query: 181 QVYLIDLEFGCCTAHTLPELTDGQSFHVALARQDCVYFLGGHILSSDCRPSRLIRLHVEL 240 V+LID EFGC T++ LPEL DG SFHV++AR D VY LGGH L+S+ RP+ L R+ V+L Sbjct: 180 HVFLIDFEFGCATSYILPELQDGLSFHVSIARNDTVYILGGHSLASNIRPANLYRIRVDL 239 Query: 241 LLGSPVLTCTILHEGLTITSAIASPIGYHEYIIFGGYQSETQKRMECTYVGLDDVGVHME 300 LG+P + CT+L G++++SAI + E++I GGYQ E QKRM C+ V L D + + Sbjct: 240 PLGTPAVNCTVLPGGISVSSAILTQTNNDEFVIVGGYQLENQKRMVCSLVSLGDNTIEIS 299 Query: 301 SREPPQWTSEISHSRTWFGGSLGKGTALVAIPSEGNPTPPEAYHFYQVSF 350 E P WTS+I HS+ WFG ++G GT + IP + EA++FY + Sbjct: 300 EMETPDWTSDIKHSKIWFGSNMGNGTIFLGIPGDNKQAMSEAFYFYTLRC 349 >2V83-A nrPDB Length = 82 Score = 155 bits (391), Expect = 5e-38, Method: Composition-based stats. Identities = 42/77 (54%), Positives = 57/77 (74%), Gaps = 1/77 (1%) Query: 412 QTGYWIKCCLSCQVDPNIWEPYYSTELTRPAMIFCSRGEGGHWVHAQCMELPESLLLQLS 471 + GYWI CC +C VD N W P+YSTEL +PAMI+CS G+ GHWVHAQCM+L E L+ LS Sbjct: 7 EFGYWITCCPTCDVDINTWVPFYSTELNKPAMIYCSHGD-GHWVHAQCMDLEERTLIHLS 65 Query: 472 QDNSKYFCLDHGGLPKQ 488 + ++KY+C +H + + Sbjct: 66 EGSNKYYCNEHVQIARA 82 >4BXZ-X nrPDB Length = 594 Score = 35.4 bits (80), Expect = 0.062, Method: Composition-based stats. Identities = 25/81 (30%), Positives = 39/81 (48%), Gaps = 9/81 (11%) Query: 400 DTYN-EEDEEDESQTGYWIKCCLSCQVDPNIWEPYYSTELTRPAMIFCSRGEGGHWVHAQ 458 DT N DE DE+ GY ++C C + E Y + E + M+ C + W H + Sbjct: 56 DTENVRTDEVDEADEGY-VRCL--CGANN---ENYDAAEYSHGDMVQCDGCDT--WQHIK 107 Query: 459 CMELPESLLLQLSQDNSKYFC 479 CM + + L ++SKY+C Sbjct: 108 CMTDGKDTIDGLMSEDSKYYC 128 >4GOP-C nrPDB Length = 444 Score = 33.1 bits (74), Expect = 0.30, Method: Composition-based stats. Identities = 17/53 (32%), Positives = 27/53 (50%), Gaps = 6/53 (11%) Query: 104 SSLYMLSVDSRGCNRKVTL------RCEEKELVGDVPSARYGHTLSVINSRGK 150 +LY + S GCN+KV L RCE+ + P RY + +V ++ G+ Sbjct: 304 ENLYYTACASEGCNKKVNLDHENNWRCEKCDRSYATPEYRYILSTNVADATGQ 356 >4Z3X-A nrPDB Length = 653 Score = 31.9 bits (71), Expect = 0.76, Method: Composition-based stats. Identities = 24/100 (24%), Positives = 38/100 (38%), Gaps = 22/100 (22%) Query: 193 TAHTLP-ELTDGQSFHVALARQDCVYFLGGHILSSDCR--------------PSRLIRLH 237 T + L +LT G VA +D +LGG L ++ + P L+ Sbjct: 6 TGYVLEVDLTKGSIERVATDPRDTELYLGG--LGTNAKILWDRVPPEVEPFSPENLLIFA 63 Query: 238 VELLLGSPVLTCTILHEGLTITSAIASPIGYHEYIIFGGY 277 LL G+P C TI S ++ + + GG+ Sbjct: 64 AGLLCGTPATGCN-----RTIVSTVSPQTKLMAFSMMGGF 98 >5GQ0-B nrPDB Length = 349 Score = 31.5 bits (70), Expect = 0.98, Method: Composition-based stats. Identities = 13/37 (35%), Positives = 19/37 (51%) Query: 77 IAHFEAQDGKPECYLIHGGRTPNNELSSSLYMLSVDS 113 A+ A L+HGG+ P NE + LY +V+S Sbjct: 304 TAYTAATVDGKNGLLMHGGKLPTNERTDDLYFYAVNS 340 >6BRO-B nrPDB Length = 688 Score = 29.6 bits (65), Expect = 3.5, Method: Composition-based stats. Identities = 23/105 (21%), Positives = 44/105 (41%), Gaps = 13/105 (12%) Query: 414 GYWIKCCLSCQVDPNIWEPYYSTELTRPAMIFCSRGEGGHW------VHAQCMELPESLL 467 GY + + Q+D ++WE +Y + ++ E +W VH + + LP L Sbjct: 563 GYALTA-PTGQMDLSLWERFYLHGIESLQTLY----ELDYWPPQDKDVHHRSLTLPAVGL 617 Query: 468 LQLSQDNSKYFCLDHGGLPKQEMTPPKQMLPVKRVPMKMTHRKAP 512 +Q K F HG + MT + ++ + ++ + AP Sbjct: 618 IQRCVGLRKLFI--HGTTHEHFMTFFLSIPNLRDMQLREDYYPAP 660 >5HZG-B nrPDB Length = 740 Score = 29.2 bits (64), Expect = 4.1, Method: Composition-based stats. Identities = 23/105 (21%), Positives = 44/105 (41%), Gaps = 13/105 (12%) Query: 414 GYWIKCCLSCQVDPNIWEPYYSTELTRPAMIFCSRGEGGHW------VHAQCMELPESLL 467 GY + + Q+D ++WE +Y + ++ E +W VH + + LP L Sbjct: 615 GYALTA-PTGQMDLSLWERFYLHGIESLQTLY----ELDYWPPQDKDVHHRSLTLPAVGL 669 Query: 468 LQLSQDNSKYFCLDHGGLPKQEMTPPKQMLPVKRVPMKMTHRKAP 512 +Q K F HG + MT + ++ + ++ + AP Sbjct: 670 IQRCVGLRKLFI--HGTTHEHFMTFFLSIPNLRDMQLREDYYPAP 712 Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta Posted date: Jan 3, 2023 9:05 PM Number of letters in database: 10,336,785 Number of sequences in database: 36,641 Lambda K H 0.311 0.137 0.416 Lambda K H 0.267 0.0404 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 22,346,366 Number of Sequences: 36641 Number of extensions: 951775 Number of successful extensions: 2269 Number of sequences better than 10.0: 14 Number of HSP's better than 10.0 without gapping: 14 Number of HSP's successfully gapped in prelim test: 17 Number of HSP's that attempted gapping in prelim test: 2208 Number of HSP's gapped (non-prelim): 48 length of query: 530 length of database: 10,336,785 effective HSP length: 102 effective length of query: 428 effective length of database: 6,599,403 effective search space: 2824544484 effective search space used: 2824544484 T: 11 A: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.3 bits) S2: 61 (28.1 bits)