BLASTP 2.2.23 [Feb-03-2010] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= O00584 (256 letters) Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta 36,641 sequences; 10,336,785 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value 3T0O-A nrPDB 483 e-137 1DIX-A nrPDB 108 2e-24 1IYB-A nrPDB 108 3e-24 1VD3-A nrPDB 88 4e-18 3TBJ-A nrPDB 85 3e-17 1J1F-A nrPDB 82 2e-16 1SGL-A nrPDB 78 4e-15 1JY5-A nrPDB 75 4e-14 1BOL-A nrPDB 68 4e-12 1IQQ-A nrPDB 66 1e-11 1IOO-A nrPDB 55 3e-08 2EA1-A nrPDB 33 0.100 1HP1-A nrPDB 30 0.87 2OI8-A nrPDB 30 1.1 1REO-A nrPDB 30 1.2 1EP2-B nrPDB 29 1.8 1PVT-A nrPDB 29 1.9 5H12-A nrPDB 29 2.1 1F8S-A nrPDB 28 2.7 2VWK-A nrPDB 28 4.6 5KSW-B nrPDB 28 5.3 >3T0O-A nrPDB Length = 238 Score = 483 bits (1243), Expect = e-137, Method: Compositional matrix adjust. Identities = 232/232 (100%), Positives = 232/232 (100%) Query: 25 DKRLRDNHEWKKLIMVQHWPETVCEKIQNDCRDPPDYWTIHGLWPDKSEGCNRSWPFNLE 84 DKRLRDNHEWKKLIMVQHWPETVCEKIQNDCRDPPDYWTIHGLWPDKSEGCNRSWPFNLE Sbjct: 1 DKRLRDNHEWKKLIMVQHWPETVCEKIQNDCRDPPDYWTIHGLWPDKSEGCNRSWPFNLE 60 Query: 85 EIKDLLPEMRAYWPDVIHSFPNRSRFWKHEWEKHGTCAAQVDALNSQKKYFGRSLELYRE 144 EIKDLLPEMRAYWPDVIHSFPNRSRFWKHEWEKHGTCAAQVDALNSQKKYFGRSLELYRE Sbjct: 61 EIKDLLPEMRAYWPDVIHSFPNRSRFWKHEWEKHGTCAAQVDALNSQKKYFGRSLELYRE 120 Query: 145 LDLNSVLLKLGIKPSINYYQVADFKDALARVYGVIPKIQCLPPSQDEEVQTIGQIELCLT 204 LDLNSVLLKLGIKPSINYYQVADFKDALARVYGVIPKIQCLPPSQDEEVQTIGQIELCLT Sbjct: 121 LDLNSVLLKLGIKPSINYYQVADFKDALARVYGVIPKIQCLPPSQDEEVQTIGQIELCLT 180 Query: 205 KQDQQLQNCTEPGEQPSPKQEVWLANGAAESRGLRVCEDGPVFYPPPKKTKH 256 KQDQQLQNCTEPGEQPSPKQEVWLANGAAESRGLRVCEDGPVFYPPPKKTKH Sbjct: 181 KQDQQLQNCTEPGEQPSPKQEVWLANGAAESRGLRVCEDGPVFYPPPKKTKH 232 >1DIX-A nrPDB Length = 208 Score = 108 bits (270), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 61/191 (31%), Positives = 98/191 (51%), Gaps = 15/191 (7%) Query: 33 EWKKLIMVQHWPETVCEKIQNDCR----DPPDYWTIHGLWPDKSEG-----CNRSWPFNL 83 ++ VQ WP + C+ Q+ C P + IHGLWP+ ++G C+ + P++ Sbjct: 6 DFDFFYFVQQWPGSYCDTKQSCCYPTTGKPAADFGIHGLWPNNNDGTYPSNCDPNSPYDQ 65 Query: 84 EEIKDLLPEMRAYWPDVIHSFPNRSRFWKHEWEKHGTCAAQVDALNSQKKYFGRSLELYR 143 +I DL+ M+ WP + + S FW HEWEKHGTCA V L +Q YF ++L+L Sbjct: 66 SQISDLISSMQQNWPTLACPSGSGSTFWSHEWEKHGTCAESV--LTNQHAYFKKALDLKN 123 Query: 144 ELDLNSVLLKLGIKPSINYYQVADFKDALARVYGVIPKIQCLPPSQDEEVQT-IGQIELC 202 ++DL S+L I P Y + + ++A+ G P IQC + D+ + + Q+ +C Sbjct: 124 QIDLLSILQGADIHPDGESYDLVNIRNAIKSAIGYTPWIQC---NVDQSGNSQLYQVYIC 180 Query: 203 LTKQDQQLQNC 213 + L C Sbjct: 181 VDGSGSSLIEC 191 >1IYB-A nrPDB Length = 208 Score = 108 bits (269), Expect = 3e-24, Method: Compositional matrix adjust. Identities = 60/192 (31%), Positives = 95/192 (49%), Gaps = 16/192 (8%) Query: 32 HEWKKLIMVQHWPETVCEKIQNDCR----DPPDYWTIHGLWPDKSEG-----CNRSWPFN 82 ++ VQ WP + C+ Q+ C P + IHGLWP+ ++G C+ + P++ Sbjct: 6 QDFDFFYFVQQWPGSYCDTKQSCCYPKTGKPASDFGIHGLWPNNNDGSYPSNCDSNSPYD 65 Query: 83 LEEIKDLLPEMRAYWPDVIHSFPNRSRFWKHEWEKHGTCAAQVDALNSQKKYFGRSLELY 142 ++ DL+ M+ WP + S FW HEWEKHGTCA V Q YF ++L+L Sbjct: 66 QSQVSDLISRMQQNWPTLACPSGTGSAFWSHEWEKHGTCAENV---FDQHGYFKKALDLK 122 Query: 143 RELDLNSVLLKLGIKPSINYYQVADFKDALARVYGVIPKIQCLPPSQDEEVQT-IGQIEL 201 +++L +L GI P +Y + K+A+ G P I+C + DE + + QI + Sbjct: 123 NQINLLEILQGAGIHPDGGFYSLNSIKNAIRSAIGYAPGIEC---NVDESGNSQLYQIYI 179 Query: 202 CLTKQDQQLQNC 213 C+ L C Sbjct: 180 CVDGSGSNLIEC 191 >1VD3-A nrPDB Length = 217 Score = 87.8 bits (216), Expect = 4e-18, Method: Compositional matrix adjust. Identities = 56/187 (29%), Positives = 86/187 (45%), Gaps = 17/187 (9%) Query: 37 LIMVQHWPETVCEKIQNDCR----DPPDYWTIHGLWPDKSEG-----CNRSWPFNLEEIK 87 VQ WP + C+ ++ C P + ++IHGLWP+ G C+R + EI Sbjct: 11 FYFVQQWPASYCDTRRSCCYPTTGKPDEDFSIHGLWPNYENGKWPQNCDRESSLDESEIS 70 Query: 88 DLLPEMRAYWPDVIHSFPNRSRFWKHEWEKHGTCAAQVDALNSQKKYFGRSLELYRELDL 147 DL+ M WP + + RFW HEW KHGTC+A ++ YF +L+ ++ +L Sbjct: 71 DLISTMEKNWPSLACPSSDGVRFWSHEWLKHGTCSAL-----GERAYFQAALDFRKKSNL 125 Query: 148 NSVLLKLGIKP-SINYYQVADFKDALARVYGVIPKIQCLPPSQDEEVQTIGQIELCLTKQ 206 L I P + +Y + K A+ G P I+C +Q I Q+ LC+ K Sbjct: 126 LENLKNAEITPRNGEHYTLESIKKAIEEGVGHSPYIECNVDTQGN--HQIYQVYLCVDKT 183 Query: 207 DQQLQNC 213 +C Sbjct: 184 ATDFIDC 190 >3TBJ-A nrPDB Length = 237 Score = 85.1 bits (209), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 53/149 (35%), Positives = 79/149 (53%), Gaps = 23/149 (15%) Query: 58 PPDYWTIHGLWPDKSEG-----CNRSWPF-NLEEI------KDLLPEMRAYWPDVIHSFP 105 P D WTIHGLWPD +G C+ S + N+ I +LL M+ YWPD + Sbjct: 44 PSDSWTIHGLWPDNCDGTYQEYCDESREYSNITSILEAQNRTELLSYMKEYWPDYEGADE 103 Query: 106 NRSRFWKHEWEKHGTCAAQVD--------ALNSQKKYFGRSLELYRELDLNSVLLKLGIK 157 + S FW+HEW KHGTC ++ A +F + ++L++ LD + L GI Sbjct: 104 DES-FWEHEWNKHGTCINTIEPSCYTDYYAQEEVGDFFQQVVDLFKTLDSYTALSDAGIT 162 Query: 158 PSIN-YYQVADFKDALARVY-GVIPKIQC 184 PS + Y+++D +DALA ++ G P + C Sbjct: 163 PSEDATYKLSDIEDALAAIHDGYPPYVGC 191 >1J1F-A nrPDB Length = 191 Score = 82.4 bits (202), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 54/190 (28%), Positives = 84/190 (44%), Gaps = 15/190 (7%) Query: 33 EWKKLIMVQHWPETVCEKIQNDCRDPPD---YWTIHGLWPDKS----EGCNRSWPFNLEE 85 E+ VQ WP VC Q P +TIHGLWP +S C S PF++ + Sbjct: 1 EFDSFWFVQQWPPAVCS-FQKSGSCPGSGLRTFTIHGLWPQQSGTSLTNCPGS-PFDITK 58 Query: 86 IKDLLPEMRAYWPDVIHSFPNRSRFWKHEWEKHGTCAAQVDALNSQKKYFGRSLELYREL 145 I L ++ WP V+ + N +FW HEW KHGTC+ ++ +Q YF ++++ Sbjct: 59 ISHLQSQLNTLWPTVLRA--NNQQFWSHEWTKHGTCS---ESTFNQAAYFKLAVDMRNNY 113 Query: 146 DLNSVLLKLGIKPSINYYQVADFKDALARVYGVIPKIQCLPPSQDEEVQTIGQIELCLTK 205 D+ L P+ K L +G P ++C Q +V + ++ C + Sbjct: 114 DIIGALRPHAAGPNGRTKSRQAIKGFLKAKFGKFPGLRCRTDPQ-TKVSYLVEVVACFAQ 172 Query: 206 QDQQLQNCTE 215 L +CT Sbjct: 173 DGSTLIDCTR 182 >1SGL-A nrPDB Length = 209 Score = 77.8 bits (190), Expect = 4e-15, Method: Compositional matrix adjust. Identities = 61/208 (29%), Positives = 95/208 (45%), Gaps = 26/208 (12%) Query: 30 DNHEWKKLIMVQHWPETVCEKIQNDC-------RDPPDYWTIHGLWPDKSEG----CNRS 78 D E+ I+ W T C C D P +TIHGL P+ S G C Sbjct: 1 DEREFDYFILALQWAGTSCRSGGACCPYNGCCKADSPTQFTIHGLRPEYSGGERPSCCTG 60 Query: 79 WPFNLEEIKDLLPEMRAYWPD----VIHSFPNRSR-FWKHEWEKHGTCAAQVDALNSQKK 133 F+ +EI ++ YWP + S NR W ++EKHGTCA+ V + + Sbjct: 61 GSFDPDEIMPFFGKLVEYWPTYRCALEQSCNNRKEILWGQQYEKHGTCASPV--IKGEWN 118 Query: 134 YFGRSLELYRELDLNSVLLKLGIKPSIN-YYQVADFKDALARVYGVIPKIQCLPPSQDEE 192 YF ++L+L+ + +++ L GI S + Y + D A+ G PK++C DEE Sbjct: 119 YFKKTLKLFMKYNVDKALEDAGIVASNSKMYDLKDIVVAVESAVGARPKLRC-----DEE 173 Query: 193 VQTIGQIELCLTKQDQQLQNCTEPGEQP 220 + ++ LC K D + ++C + G P Sbjct: 174 -GLVQKLSLCFDK-DFKPRDCVQVGSCP 199 >1JY5-A nrPDB Length = 212 Score = 74.7 bits (182), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 55/200 (27%), Positives = 90/200 (45%), Gaps = 31/200 (15%) Query: 33 EWKKLIMVQHWPETVCEKIQNDC-------RDPPDYWTIHGLWPDKSEG----CNRSWPF 81 E+ + W T C +++ C + +TI GLWPD +G C + Sbjct: 4 EFDYFTLALTWSGTECLSVKDSCPTNACSRSEVETGFTIKGLWPDYDDGTWPSCCEGAKY 63 Query: 82 NLEEIKDLLPEMRAYWPDVIHSFPNRSRF-------WKHEWEKHGTCAAQVDALNSQKKY 134 + EI L ++ YWP +S P+ S +EW KHGTC++ V L +Q +Y Sbjct: 64 DQNEISILSNDLSKYWPS--YSCPSSSACGSFDASDLAYEWAKHGTCSSPV--LGNQYEY 119 Query: 135 FGRSLELYRELDLNSVLLKLGIKPS-INYYQVADFKDALARVYGVIPKIQCLPPSQDEEV 193 F +L LY + +++ +L + G PS Y+V A+ V P ++C + Sbjct: 120 FSTTLMLYFKYNISEILSESGYLPSNTAEYKVEGIMSAIQSALRVTPVVKC-------KS 172 Query: 194 QTIGQIELCLTKQDQQLQNC 213 + Q+++C K QLQ C Sbjct: 173 DAVEQVQICFDKT-LQLQEC 191 >1BOL-A nrPDB Length = 222 Score = 68.2 bits (165), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 53/193 (27%), Positives = 79/193 (40%), Gaps = 34/193 (17%) Query: 13 CLCLALLCLGGADKRLRDNHEWKKLIMVQHWPETVCEKIQNDCRDPPDYWTIHGLWPDK- 71 C AL C A+ + E+ +++ W P + +T+HGLWPDK Sbjct: 3 CSSTALSCSNSANSDTCCSPEYGLVVLNMQWAPGY---------GPDNAFTLHGLWPDKC 53 Query: 72 ------SEGC--NRSWPFNLEEIKD----LLPEMRAYWPDVIHSFPNRSRFWKHEWEKHG 119 S GC NR+ IK L M YWP + N + FW HEW KHG Sbjct: 54 SGAYAPSGGCDSNRASSSIASVIKSKDSSLYNSMLTYWP---SNQGNNNVFWSHEWSKHG 110 Query: 120 TCAAQVD---ALNSQK-----KYFGRSLELYRELDLNSVLLKLGIKPSINYYQVADFKDA 171 TC + D N ++ YF ++++L + ++ GI P Y + + A Sbjct: 111 TCVSTYDPDCYDNYEEGEDIVDYFQKAMDLRSQYNVYKAFSSNGITPG-GTYTATEMQSA 169 Query: 172 LARVYGVIPKIQC 184 + +G KI C Sbjct: 170 IESYFGAKAKIDC 182 >1IQQ-A nrPDB Length = 200 Score = 66.2 bits (160), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 53/190 (27%), Positives = 90/190 (47%), Gaps = 11/190 (5%) Query: 39 MVQHWPETVCEKIQNDCRDPPD-YWTIHGLWPDKSEGCNRS-WPF-NLEEIKDLLP-EMR 94 Q + VC + C+DPPD +T+HGLWP G + S P N+ + + LL ++ Sbjct: 6 FTQQYQLAVCNSNRTLCKDPPDKLFTVHGLWPSNMVGPDPSKCPIKNIRKREKLLEHQLE 65 Query: 95 AYWPDVIHSFPNRSRFWKHEWEKHGTCAAQVDALNSQKKYFGRSLELY--RELDLNSVLL 152 WP+V N + FW EW KHG+C ++++ YF +++Y ++ +++ +L Sbjct: 66 IIWPNVFDRTKN-NLFWDKEWMKHGSCGYP--TIDNENHYFETVIKMYISKKQNVSRILS 122 Query: 153 KLGIKPSINYYQVADFKDALARVYGVIPKIQCLPPSQDEEVQTIGQIELCLTKQDQQLQN 212 K I+P + D ++A+ G K L + + +I LC K + + Sbjct: 123 KAKIEPDGKKRALLDIENAIRN--GADNKKPKLKCQKKGTTTELVEITLCSDKSGEHFID 180 Query: 213 CTEPGEQPSP 222 C P E SP Sbjct: 181 CPHPFEPISP 190 >1IOO-A nrPDB Length = 196 Score = 55.1 bits (131), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 53/190 (27%), Positives = 85/190 (44%), Gaps = 19/190 (10%) Query: 33 EWKKLIMVQHWPETVCEKIQNDC-RDPPDYWTIHGLWPD----KSEGCNRSWPFNLEEIK 87 +++ L +V WP + C N C R P+ +TIHGLWPD + C ++ K Sbjct: 1 DFEYLQLVLTWPASFC--YANHCERIAPNNFTIHGLWPDNVKTRLHNCKPKPTYSYFTGK 58 Query: 88 DLLPEMRAYWPDV-IHSFPNRSR--FWKHEWEKHGTCAAQVDALNSQKKYFGRSLELYRE 144 +L ++ +W + R+ WK+++ KHG+C + +Q YFG +L L + Sbjct: 59 -MLNDLDKHWMQLKFEQDYGRTEQPSWKYQYIKHGSCCQK---RYNQNTYFGLALRLKDK 114 Query: 145 LDLNSVLLKLGIKPSINYYQVADFKDALARVYGVIPKIQCLPPSQDE-EVQTIGQIELCL 203 DL L I P + Y D DA+ V P I+C ++ E+ IG +C Sbjct: 115 FDLLRTLQTHRIIPGSS-YTFQDIFDAIKTVSQENPDIKCAEVTKGTPELYEIG---ICF 170 Query: 204 TKQDQQLQNC 213 T + C Sbjct: 171 TPNADSMFRC 180 >2EA1-A nrPDB Length = 245 Score = 33.5 bits (75), Expect = 0.100, Method: Compositional matrix adjust. Identities = 41/187 (21%), Positives = 68/187 (36%), Gaps = 52/187 (27%) Query: 33 EWKKLIMVQHWPETVCE-------------KIQNDCRDPPDYWTIHGLWPDKSE------ 73 ++ + ++ W C+ ++Q + + D+ T+HGLWP + Sbjct: 10 DFDRYVLALSWQTGFCQSQHDRNRNERDECRLQTETTNKADFLTVHGLWPGLPKSVAARG 69 Query: 74 ---------GCNRSWPFNLEEIK----------DLLPEMRAYWPDVIHSFPNRSRFWKHE 114 GC NL E + L E A +V+ RS ++E Sbjct: 70 VDERRWMRFGCATRPIPNLPEARASRMCSSPETGLSLETAAKLSEVMPGAGGRSCLERYE 129 Query: 115 WEKHGTC-AAQVDALNSQKKYFGRSLELYRELDLNSVLLKLGIKPSINYYQVA---DFKD 170 + KHG C DA YFG + L +E+ + G + NY + DF Sbjct: 130 YAKHGACFGFDPDA------YFGTMVRLNQEIKESEA----GKFLADNYGKTVSRRDFDA 179 Query: 171 ALARVYG 177 A A+ +G Sbjct: 180 AFAKSWG 186 >1HP1-A nrPDB Length = 516 Score = 30.4 bits (67), Expect = 0.87, Method: Compositional matrix adjust. Identities = 15/58 (25%), Positives = 30/58 (51%), Gaps = 2/58 (3%) Query: 94 RAYWPDVIHSFPNRSRFWKHEWEKHGTCAAQ--VDALNSQKKYFGRSLELYRELDLNS 149 + Y V+H+ + FW++E+ ++G A + VD + + G S+ L D+N+ Sbjct: 5 KTYKITVLHTNDHHGHFWRNEYGEYGLAAQKTLVDGIRKEVAAEGGSVLLLSGGDINT 62 >2OI8-A nrPDB Length = 216 Score = 30.0 bits (66), Expect = 1.1, Method: Compositional matrix adjust. Identities = 19/58 (32%), Positives = 25/58 (43%), Gaps = 1/58 (1%) Query: 90 LPEMRAYWPDVIHSFPNRSRFWKHEWEKHGTCAAQVDALNSQKKYFGRSL-ELYRELD 146 +PE R P + R+ H WE+ T A +LN+ K G S LYR D Sbjct: 1 MPEARTSTPRERYRTQVRAEIKDHAWEQIATAGASALSLNAIAKRMGMSGPALYRYFD 58 >1REO-A nrPDB Length = 486 Score = 29.6 bits (65), Expect = 1.2, Method: Compositional matrix adjust. Identities = 17/47 (36%), Positives = 23/47 (48%), Gaps = 3/47 (6%) Query: 150 VLLKLGIKPSINYYQVADFKDALARVYGVIPKIQCLPPSQDEEVQTI 196 V++ GI N++Q DFKD V + I LP EE+QT Sbjct: 368 VIIAYGIGDDANFFQALDFKDCADIVINDLSLIHQLPR---EEIQTF 411 >1EP2-B nrPDB Length = 261 Score = 29.3 bits (64), Expect = 1.8, Method: Compositional matrix adjust. Identities = 11/14 (78%), Positives = 12/14 (85%) Query: 234 ESRGLRVCEDGPVF 247 ES L+VCEDGPVF Sbjct: 241 ESHALKVCEDGPVF 254 >1PVT-A nrPDB Length = 238 Score = 29.3 bits (64), Expect = 1.9, Method: Compositional matrix adjust. Identities = 16/41 (39%), Positives = 23/41 (56%), Gaps = 2/41 (4%) Query: 81 FNLEEIKDLLPEMRAYWPDVIHSFPNRSRFWKHEWEKHGTC 121 NLEE ++LLP+M P+V+ FP E+EK G+ Sbjct: 135 MNLEEFQELLPKMMKIHPEVLIFFPQGISVV--EFEKPGSV 173 >5H12-A nrPDB Length = 775 Score = 28.9 bits (63), Expect = 2.1, Method: Composition-based stats. Identities = 11/28 (39%), Positives = 18/28 (64%) Query: 116 EKHGTCAAQVDALNSQKKYFGRSLELYR 143 E+HG +DA +KK+ GR +E++R Sbjct: 57 ERHGKIVRIIDAEKVRKKFLGRPIEVWR 84 >1F8S-A nrPDB Length = 498 Score = 28.5 bits (62), Expect = 2.7, Method: Compositional matrix adjust. Identities = 13/37 (35%), Positives = 19/37 (51%) Query: 150 VLLKLGIKPSINYYQVADFKDALARVYGVIPKIQCLP 186 V++ GI N++Q DFKD V+ + I LP Sbjct: 368 VIIAYGIGDDANFFQALDFKDCADIVFNDLSLIHQLP 404 >2VWK-A nrPDB Length = 773 Score = 27.7 bits (60), Expect = 4.6, Method: Composition-based stats. Identities = 11/28 (39%), Positives = 18/28 (64%) Query: 116 EKHGTCAAQVDALNSQKKYFGRSLELYR 143 E+HGT V A +KK+ GR +E+++ Sbjct: 57 ERHGTTVRVVRAEKVKKKFLGRPIEVWK 84 >5KSW-B nrPDB Length = 262 Score = 27.7 bits (60), Expect = 5.3, Method: Compositional matrix adjust. Identities = 10/14 (71%), Positives = 12/14 (85%) Query: 234 ESRGLRVCEDGPVF 247 E+ L+VCEDGPVF Sbjct: 242 ENHALKVCEDGPVF 255 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: 3T0O-A nrPDB 350 3e-97 1DIX-A nrPDB 241 2e-64 1IYB-A nrPDB 241 3e-64 1VD3-A nrPDB 224 3e-59 1J1F-A nrPDB 207 4e-54 1IQQ-A nrPDB 198 2e-51 1SGL-A nrPDB 197 4e-51 1IOO-A nrPDB 186 1e-47 1JY5-A nrPDB 177 4e-45 1BOL-A nrPDB 177 5e-45 3TBJ-A nrPDB 136 9e-33 Sequences not found previously or not previously below threshold: 2EA1-A nrPDB 48 4e-06 4DWC-A nrPDB 35 0.044 1EP2-B nrPDB 30 0.67 4I9E-A nrPDB 29 1.5 6FOH-A nrPDB 29 2.0 3VGJ-A nrPDB 29 2.5 4XKJ-A nrPDB 29 2.7 5AC0-A nrPDB 29 2.8 2C2L-A nrPDB 29 3.0 5VYL-A nrPDB 29 3.1 4WES-A nrPDB 28 3.7 4GAA-A nrPDB 28 4.7 2F42-A nrPDB 28 4.9 5LZL-A nrPDB 28 5.0 2OXQ-C nrPDB 27 7.3 2C2V-S nrPDB 27 7.3 3HZZ-A nrPDB 27 7.5 6IJO-H nrPDB 27 7.7 >3T0O-A nrPDB Length = 238 Score = 350 bits (899), Expect = 3e-97, Method: Composition-based stats. Identities = 232/232 (100%), Positives = 232/232 (100%) Query: 25 DKRLRDNHEWKKLIMVQHWPETVCEKIQNDCRDPPDYWTIHGLWPDKSEGCNRSWPFNLE 84 DKRLRDNHEWKKLIMVQHWPETVCEKIQNDCRDPPDYWTIHGLWPDKSEGCNRSWPFNLE Sbjct: 1 DKRLRDNHEWKKLIMVQHWPETVCEKIQNDCRDPPDYWTIHGLWPDKSEGCNRSWPFNLE 60 Query: 85 EIKDLLPEMRAYWPDVIHSFPNRSRFWKHEWEKHGTCAAQVDALNSQKKYFGRSLELYRE 144 EIKDLLPEMRAYWPDVIHSFPNRSRFWKHEWEKHGTCAAQVDALNSQKKYFGRSLELYRE Sbjct: 61 EIKDLLPEMRAYWPDVIHSFPNRSRFWKHEWEKHGTCAAQVDALNSQKKYFGRSLELYRE 120 Query: 145 LDLNSVLLKLGIKPSINYYQVADFKDALARVYGVIPKIQCLPPSQDEEVQTIGQIELCLT 204 LDLNSVLLKLGIKPSINYYQVADFKDALARVYGVIPKIQCLPPSQDEEVQTIGQIELCLT Sbjct: 121 LDLNSVLLKLGIKPSINYYQVADFKDALARVYGVIPKIQCLPPSQDEEVQTIGQIELCLT 180 Query: 205 KQDQQLQNCTEPGEQPSPKQEVWLANGAAESRGLRVCEDGPVFYPPPKKTKH 256 KQDQQLQNCTEPGEQPSPKQEVWLANGAAESRGLRVCEDGPVFYPPPKKTKH Sbjct: 181 KQDQQLQNCTEPGEQPSPKQEVWLANGAAESRGLRVCEDGPVFYPPPKKTKH 232 >1DIX-A nrPDB Length = 208 Score = 241 bits (615), Expect = 2e-64, Method: Composition-based stats. Identities = 60/193 (31%), Positives = 95/193 (49%), Gaps = 13/193 (6%) Query: 31 NHEWKKLIMVQHWPETVCEKIQNDCR----DPPDYWTIHGLWPDKSEG-----CNRSWPF 81 + ++ VQ WP + C+ Q+ C P + IHGLWP+ ++G C+ + P+ Sbjct: 4 SKDFDFFYFVQQWPGSYCDTKQSCCYPTTGKPAADFGIHGLWPNNNDGTYPSNCDPNSPY 63 Query: 82 NLEEIKDLLPEMRAYWPDVIHSFPNRSRFWKHEWEKHGTCAAQVDALNSQKKYFGRSLEL 141 + +I DL+ M+ WP + + S FW HEWEKHGTCA V L +Q YF ++L+L Sbjct: 64 DQSQISDLISSMQQNWPTLACPSGSGSTFWSHEWEKHGTCAESV--LTNQHAYFKKALDL 121 Query: 142 YRELDLNSVLLKLGIKPSINYYQVADFKDALARVYGVIPKIQCLPPSQDEEVQTIGQIEL 201 ++DL S+L I P Y + + ++A+ G P IQC + Q+ + Sbjct: 122 KNQIDLLSILQGADIHPDGESYDLVNIRNAIKSAIGYTPWIQCNVDQSGNS--QLYQVYI 179 Query: 202 CLTKQDQQLQNCT 214 C+ L C Sbjct: 180 CVDGSGSSLIECP 192 >1IYB-A nrPDB Length = 208 Score = 241 bits (614), Expect = 3e-64, Method: Composition-based stats. Identities = 58/192 (30%), Positives = 91/192 (47%), Gaps = 14/192 (7%) Query: 32 HEWKKLIMVQHWPETVCEKIQNDCR----DPPDYWTIHGLWPDKSEG-----CNRSWPFN 82 ++ VQ WP + C+ Q+ C P + IHGLWP+ ++G C+ + P++ Sbjct: 6 QDFDFFYFVQQWPGSYCDTKQSCCYPKTGKPASDFGIHGLWPNNNDGSYPSNCDSNSPYD 65 Query: 83 LEEIKDLLPEMRAYWPDVIHSFPNRSRFWKHEWEKHGTCAAQVDALNSQKKYFGRSLELY 142 ++ DL+ M+ WP + S FW HEWEKHGTCA V Q YF ++L+L Sbjct: 66 QSQVSDLISRMQQNWPTLACPSGTGSAFWSHEWEKHGTCAENV---FDQHGYFKKALDLK 122 Query: 143 RELDLNSVLLKLGIKPSINYYQVADFKDALARVYGVIPKIQCLPPSQDEEVQTIGQIELC 202 +++L +L GI P +Y + K+A+ G P I+C + QI +C Sbjct: 123 NQINLLEILQGAGIHPDGGFYSLNSIKNAIRSAIGYAPGIECNVDESGNS--QLYQIYIC 180 Query: 203 LTKQDQQLQNCT 214 + L C Sbjct: 181 VDGSGSNLIECP 192 >1VD3-A nrPDB Length = 217 Score = 224 bits (570), Expect = 3e-59, Method: Composition-based stats. Identities = 56/193 (29%), Positives = 88/193 (45%), Gaps = 17/193 (8%) Query: 32 HEWKKLIMVQHWPETVCEKIQNDCR----DPPDYWTIHGLWPDKSEG-----CNRSWPFN 82 ++ VQ WP + C+ ++ C P + ++IHGLWP+ G C+R + Sbjct: 6 QDFDFFYFVQQWPASYCDTRRSCCYPTTGKPDEDFSIHGLWPNYENGKWPQNCDRESSLD 65 Query: 83 LEEIKDLLPEMRAYWPDVIHSFPNRSRFWKHEWEKHGTCAAQVDALNSQKKYFGRSLELY 142 EI DL+ M WP + + RFW HEW KHGTC+A ++ YF +L+ Sbjct: 66 ESEISDLISTMEKNWPSLACPSSDGVRFWSHEWLKHGTCSAL-----GERAYFQAALDFR 120 Query: 143 RELDLNSVLLKLGIKP-SINYYQVADFKDALARVYGVIPKIQCLPPSQDEEVQTIGQIEL 201 ++ +L L I P + +Y + K A+ G P I+C +Q I Q+ L Sbjct: 121 KKSNLLENLKNAEITPRNGEHYTLESIKKAIEEGVGHSPYIECNVDTQGN--HQIYQVYL 178 Query: 202 CLTKQDQQLQNCT 214 C+ K +C Sbjct: 179 CVDKTATDFIDCP 191 >1J1F-A nrPDB Length = 191 Score = 207 bits (527), Expect = 4e-54, Method: Composition-based stats. Identities = 52/189 (27%), Positives = 82/189 (43%), Gaps = 13/189 (6%) Query: 33 EWKKLIMVQHWPETVCEKIQNDCRDPPD---YWTIHGLWPDKSEGC---NRSWPFNLEEI 86 E+ VQ WP VC Q P +TIHGLWP +S PF++ +I Sbjct: 1 EFDSFWFVQQWPPAVC-SFQKSGSCPGSGLRTFTIHGLWPQQSGTSLTNCPGSPFDITKI 59 Query: 87 KDLLPEMRAYWPDVIHSFPNRSRFWKHEWEKHGTCAAQVDALNSQKKYFGRSLELYRELD 146 L ++ WP V+ + N +FW HEW KHGTC+ ++ +Q YF ++++ D Sbjct: 60 SHLQSQLNTLWPTVLRA--NNQQFWSHEWTKHGTCS---ESTFNQAAYFKLAVDMRNNYD 114 Query: 147 LNSVLLKLGIKPSINYYQVADFKDALARVYGVIPKIQCLPPSQDEEVQTIGQIELCLTKQ 206 + L P+ K L +G P ++C Q +V + ++ C + Sbjct: 115 IIGALRPHAAGPNGRTKSRQAIKGFLKAKFGKFPGLRCRTDPQ-TKVSYLVEVVACFAQD 173 Query: 207 DQQLQNCTE 215 L +CT Sbjct: 174 GSTLIDCTR 182 >1IQQ-A nrPDB Length = 200 Score = 198 bits (503), Expect = 2e-51, Method: Composition-based stats. Identities = 53/195 (27%), Positives = 91/195 (46%), Gaps = 11/195 (5%) Query: 34 WKKLIMVQHWPETVCEKIQNDCRDPPD-YWTIHGLWPDKSEGCNRS-WPF-NLEEIKDLL 90 + Q + VC + C+DPPD +T+HGLWP G + S P N+ + + LL Sbjct: 1 YDYFQFTQQYQLAVCNSNRTLCKDPPDKLFTVHGLWPSNMVGPDPSKCPIKNIRKREKLL 60 Query: 91 P-EMRAYWPDVIHSFPNRSRFWKHEWEKHGTCAAQVDALNSQKKYFGRSLELY--RELDL 147 ++ WP+V N + FW EW KHG+C ++++ YF +++Y ++ ++ Sbjct: 61 EHQLEIIWPNVFDRTKN-NLFWDKEWMKHGSCGYP--TIDNENHYFETVIKMYISKKQNV 117 Query: 148 NSVLLKLGIKPSINYYQVADFKDALARVYGVIPKIQCLPPSQDEEVQTIGQIELCLTKQD 207 + +L K I+P + D ++A+ G K L + + +I LC K Sbjct: 118 SRILSKAKIEPDGKKRALLDIENAIRN--GADNKKPKLKCQKKGTTTELVEITLCSDKSG 175 Query: 208 QQLQNCTEPGEQPSP 222 + +C P E SP Sbjct: 176 EHFIDCPHPFEPISP 190 >1SGL-A nrPDB Length = 209 Score = 197 bits (501), Expect = 4e-51, Method: Composition-based stats. Identities = 59/208 (28%), Positives = 94/208 (45%), Gaps = 26/208 (12%) Query: 30 DNHEWKKLIMVQHWPETVCEKIQNDC-------RDPPDYWTIHGLWPDKSEG----CNRS 78 D E+ I+ W T C C D P +TIHGL P+ S G C Sbjct: 1 DEREFDYFILALQWAGTSCRSGGACCPYNGCCKADSPTQFTIHGLRPEYSGGERPSCCTG 60 Query: 79 WPFNLEEIKDLLPEMRAYWPD----VIHSFPNRSR-FWKHEWEKHGTCAAQVDALNSQKK 133 F+ +EI ++ YWP + S NR W ++EKHGTCA+ V + + Sbjct: 61 GSFDPDEIMPFFGKLVEYWPTYRCALEQSCNNRKEILWGQQYEKHGTCASPV--IKGEWN 118 Query: 134 YFGRSLELYRELDLNSVLLKLGIKPSIN-YYQVADFKDALARVYGVIPKIQCLPPSQDEE 192 YF ++L+L+ + +++ L GI S + Y + D A+ G PK++C +E Sbjct: 119 YFKKTLKLFMKYNVDKALEDAGIVASNSKMYDLKDIVVAVESAVGARPKLRC------DE 172 Query: 193 VQTIGQIELCLTKQDQQLQNCTEPGEQP 220 + ++ LC K D + ++C + G P Sbjct: 173 EGLVQKLSLCFDK-DFKPRDCVQVGSCP 199 >1IOO-A nrPDB Length = 196 Score = 186 bits (471), Expect = 1e-47, Method: Composition-based stats. Identities = 51/195 (26%), Positives = 84/195 (43%), Gaps = 17/195 (8%) Query: 33 EWKKLIMVQHWPETVCEKIQNDC-RDPPDYWTIHGLWPDK----SEGCNRSWPFNLEEIK 87 +++ L +V WP + C N C R P+ +TIHGLWPD C ++ K Sbjct: 1 DFEYLQLVLTWPASFC--YANHCERIAPNNFTIHGLWPDNVKTRLHNCKPKPTYSYFTGK 58 Query: 88 DLLPEMRAYWPDV-IHSFPNRSR--FWKHEWEKHGTCAAQVDALNSQKKYFGRSLELYRE 144 +L ++ +W + R+ WK+++ KHG+C + +Q YFG +L L + Sbjct: 59 -MLNDLDKHWMQLKFEQDYGRTEQPSWKYQYIKHGSCCQK---RYNQNTYFGLALRLKDK 114 Query: 145 LDLNSVLLKLGIKPSINYYQVADFKDALARVYGVIPKIQCLPPSQDEEVQTIGQIELCLT 204 DL L I P + Y D DA+ V P I+C ++ + +I +C T Sbjct: 115 FDLLRTLQTHRIIP-GSSYTFQDIFDAIKTVSQENPDIKCAEVTKGTP--ELYEIGICFT 171 Query: 205 KQDQQLQNCTEPGEQ 219 + C + Sbjct: 172 PNADSMFRCPQSDTC 186 >1JY5-A nrPDB Length = 212 Score = 177 bits (449), Expect = 4e-45, Method: Composition-based stats. Identities = 54/208 (25%), Positives = 89/208 (42%), Gaps = 28/208 (13%) Query: 32 HEWKKLIMVQHWPETVCEKIQNDC-------RDPPDYWTIHGLWPDKSEG----CNRSWP 80 E+ + W T C +++ C + +TI GLWPD +G C Sbjct: 3 KEFDYFTLALTWSGTECLSVKDSCPTNACSRSEVETGFTIKGLWPDYDDGTWPSCCEGAK 62 Query: 81 FNLEEIKDLLPEMRAYWPDVIHSFPNRSRFWK-----HEWEKHGTCAAQVDALNSQKKYF 135 ++ EI L ++ YWP + + +EW KHGTC++ V L +Q +YF Sbjct: 63 YDQNEISILSNDLSKYWPSYSCPSSSACGSFDASDLAYEWAKHGTCSSPV--LGNQYEYF 120 Query: 136 GRSLELYRELDLNSVLLKLGIKPSI-NYYQVADFKDALARVYGVIPKIQCLPPSQDEEVQ 194 +L LY + +++ +L + G PS Y+V A+ V P ++C + Sbjct: 121 STTLMLYFKYNISEILSESGYLPSNTAEYKVEGIMSAIQSALRVTPVVKC-------KSD 173 Query: 195 TIGQIELCLTKQDQQLQNCTEPGE-QPS 221 + Q+++C K QLQ C PS Sbjct: 174 AVEQVQICFDKT-LQLQECPSTASTCPS 200 >1BOL-A nrPDB Length = 222 Score = 177 bits (448), Expect = 5e-45, Method: Composition-based stats. Identities = 47/197 (23%), Positives = 74/197 (37%), Gaps = 34/197 (17%) Query: 13 CLCLALLCLGGADKRLRDNHEWKKLIMVQHWPETVCEKIQNDCRDPPDYWTIHGLWPDKS 72 C AL C A+ + E+ +++ W P + +T+HGLWPDK Sbjct: 3 CSSTALSCSNSANSDTCCSPEYGLVVLNMQWAPGY---------GPDNAFTLHGLWPDKC 53 Query: 73 -------EGCNRS------WPFNLEEIKDLLPEMRAYWPDVIHSFPNRSRFWKHEWEKHG 119 GC+ + + L M YWP + N + FW HEW KHG Sbjct: 54 SGAYAPSGGCDSNRASSSIASVIKSKDSSLYNSMLTYWPS---NQGNNNVFWSHEWSKHG 110 Query: 120 TCAAQVDALNSQK--------KYFGRSLELYRELDLNSVLLKLGIKPSINYYQVADFKDA 171 TC + D YF ++++L + ++ GI P Y + + A Sbjct: 111 TCVSTYDPDCYDNYEEGEDIVDYFQKAMDLRSQYNVYKAFSSNGITPGG-TYTATEMQSA 169 Query: 172 LARVYGVIPKIQCLPPS 188 + +G KI C + Sbjct: 170 IESYFGAKAKIDCSSGT 186 >3TBJ-A nrPDB Length = 237 Score = 136 bits (342), Expect = 9e-33, Method: Composition-based stats. Identities = 60/195 (30%), Positives = 89/195 (45%), Gaps = 31/195 (15%) Query: 13 CLC-LALLCLGGADKRLRDNHEWKKLIMVQHWPETVCEKIQNDCRDPPDYWTIHGLWPDK 71 C L C + N L+ Q W + P D WTIHGLWPD Sbjct: 5 CSSDSPLSCQTDNEASCCFNSPGGSLLQTQFW-------DYDPSDGPSDSWTIHGLWPDN 57 Query: 72 SEG-----CNRSWPF-NLEEI------KDLLPEMRAYWPDVIHSFPNRSRFWKHEWEKHG 119 +G C+ S + N+ I +LL M+ YWPD + + S FW+HEW KHG Sbjct: 58 CDGTYQEYCDESREYSNITSILEAQNRTELLSYMKEYWPDYEGADEDES-FWEHEWNKHG 116 Query: 120 TCAAQVD--------ALNSQKKYFGRSLELYRELDLNSVLLKLGIKPSIN-YYQVADFKD 170 TC ++ A +F + ++L++ LD + L GI PS + Y+++D +D Sbjct: 117 TCINTIEPSCYTDYYAQEEVGDFFQQVVDLFKTLDSYTALSDAGITPSEDATYKLSDIED 176 Query: 171 ALARVY-GVIPKIQC 184 ALA ++ G P + C Sbjct: 177 ALAAIHDGYPPYVGC 191 >2EA1-A nrPDB Length = 245 Score = 48.2 bits (113), Expect = 4e-06, Method: Composition-based stats. Identities = 38/234 (16%), Positives = 65/234 (27%), Gaps = 56/234 (23%) Query: 33 EWKKLIMVQHWPETVCEKI-------QNDCR------DPPDYWTIHGLWPD-----KSEG 74 ++ + ++ W C+ +++CR + D+ T+HGLWP + G Sbjct: 10 DFDRYVLALSWQTGFCQSQHDRNRNERDECRLQTETTNKADFLTVHGLWPGLPKSVAARG 69 Query: 75 CNRSWPFNLEEIKDLLPEMRAYWPDVIHSFP--------------------NRSRFWKHE 114 + +P + + S P RS ++E Sbjct: 70 VDERRWMRFGCATRPIPNLPEARASRMCSSPETGLSLETAAKLSEVMPGAGGRSCLERYE 129 Query: 115 WEKHGTCAAQVDALNSQKKYFGRSLELYRELDLNSV---LLKLGIKPSINYYQVADFKDA 171 + KHG C YFG + L +E+ + L DF A Sbjct: 130 YAKHGAC-----FGFDPDAYFGTMVRLNQEIKESEAGKFLADN----YGKTVSRRDFDAA 180 Query: 172 LARVYGVIPKIQCLPPSQDEEVQTIG-QIELCLTK-----QDQQLQNCTEPGEQ 219 A+ +G Q QI + PG Sbjct: 181 FAKSWGKENVKAVKLTCQGNPAYLTEIQISIKADAINAPLSANSFLPQPHPGNC 234 >4DWC-A nrPDB Length = 167 Score = 34.7 bits (78), Expect = 0.044, Method: Composition-based stats. Identities = 18/59 (30%), Positives = 26/59 (44%), Gaps = 4/59 (6%) Query: 63 TIHGLWPDKSEGCNRSWPFNLEEIKDLLPEMRAYWPDVIHSFPNRSRFWKHEWEKHGTC 121 ++HG+WP+K S E+K + M A + R +HEW KHG C Sbjct: 30 SLHGIWPEKICTGVPSHLATDTELKAIHGMMDAS----EKTNYTCCRLQRHEWNKHGWC 84 >1EP2-B nrPDB Length = 261 Score = 30.5 bits (67), Expect = 0.67, Method: Composition-based stats. Identities = 11/14 (78%), Positives = 12/14 (85%) Query: 234 ESRGLRVCEDGPVF 247 ES L+VCEDGPVF Sbjct: 241 ESHALKVCEDGPVF 254 >4I9E-A nrPDB Length = 383 Score = 29.3 bits (64), Expect = 1.5, Method: Composition-based stats. Identities = 9/53 (16%), Positives = 20/53 (37%) Query: 119 GTCAAQVDALNSQKKYFGRSLELYRELDLNSVLLKLGIKPSINYYQVADFKDA 171 G C YF R++ ++ E ++ L + + +Y++ A Sbjct: 231 GLCKNSQSQYEDAIPYFKRAIAVFEESNILPSLPQAYFLITQIHYKLGKIDKA 283 >6FOH-A nrPDB Length = 224 Score = 28.9 bits (63), Expect = 2.0, Method: Composition-based stats. Identities = 24/118 (20%), Positives = 40/118 (33%), Gaps = 16/118 (13%) Query: 108 SRFWKHEWEKHGTCAAQVDALNSQKKYFGRSLELYRELDLNSVL---LKLGIKPSINYYQ 164 SRFW EW K+ C + Y E+ + VL P + Sbjct: 11 SRFW--EWGKNIVCVG--------RNYADHVREMRSAVLSEPVLFLKPSTAYAPEGSPIL 60 Query: 165 VADFKDAL--ARVYGVIPKIQCLPPSQDEEVQTIGQIELCLTKQDQQLQN-CTEPGEQ 219 + + L GV+ +C + + +G LCL + +Q+ C + G Sbjct: 61 MPAYTRNLHHELELGVVMGKRCRAVPEAAAMDYVGGYALCLDMTARDVQDECKKKGLP 118 >3VGJ-A nrPDB Length = 373 Score = 28.6 bits (62), Expect = 2.5, Method: Composition-based stats. Identities = 13/75 (17%), Positives = 26/75 (34%), Gaps = 11/75 (14%) Query: 82 NLEEIKDLLPEMRAYWPDVIHSFPNRSRFWKHEWEKHGTCAAQVDALNSQKKYFGRSLEL 141 +L++IK + W + N W E + +Y+ L++ Sbjct: 109 DLKKIKKVGSYFIEVWKSCGMNMENVQFLWASE-----------EINKKPNEYWSLVLDI 157 Query: 142 YRELDLNSVLLKLGI 156 R ++N + L I Sbjct: 158 SRSFNINRMKRCLKI 172 >4XKJ-A nrPDB Length = 335 Score = 28.6 bits (62), Expect = 2.7, Method: Composition-based stats. Identities = 12/56 (21%), Positives = 24/56 (42%), Gaps = 4/56 (7%) Query: 122 AAQVDALNSQKKYFGRSLELYR----ELDLNSVLLKLGIKPSINYYQVADFKDALA 173 A +D LN ++ +F + L +L + L + I P I +Y ++ + Sbjct: 254 GAALDTLNGEEHFFNQDLCGKELPSEQLKVLRTLPNVLITPHIGFYTNKAVQNMVE 309 >5AC0-A nrPDB Length = 501 Score = 28.6 bits (62), Expect = 2.8, Method: Composition-based stats. Identities = 19/128 (14%), Positives = 39/128 (30%), Gaps = 8/128 (6%) Query: 100 VIHSFPNRSRFWKHE--WEKHGTCAAQVDALNSQK----KYFGRSLELYRELDLNSVLLK 153 + + + + H+ + G C L ++ ++ RS+E ++ L + L Sbjct: 279 FADADLDNAVEFAHQGVFYHQGQCCIAASRLFVEESIYDEFVRRSVERAKKYVLGNPLTP 338 Query: 154 L-GIKPSINYYQVADFKDALARVYGVIPKIQCLPPSQDEEVQTIGQIELCLTKQDQQLQN 212 P I+ Q D + K++C + I Q + D Sbjct: 339 GVSQGPQIDKEQYEKILDLIESGKKEGAKLECGGGPWGNKGYFI-QPTVFSDVTDDMRIA 397 Query: 213 CTEPGEQP 220 E Sbjct: 398 KEEIFGPV 405 >2C2L-A nrPDB Length = 281 Score = 28.6 bits (62), Expect = 3.0, Method: Composition-based stats. Identities = 12/58 (20%), Positives = 22/58 (37%), Gaps = 9/58 (15%) Query: 135 FGRSLELYRELDL---------NSVLLKLGIKPSINYYQVADFKDALARVYGVIPKIQ 183 F + E ++ D+ ++ + I PS Y D ++ L RV P + Sbjct: 193 FSQVDEKRKKRDIPDYLCGKISFELMREPCITPSGITYDRKDIEEHLQRVGHFNPVTR 250 >5VYL-A nrPDB Length = 579 Score = 28.6 bits (62), Expect = 3.1, Method: Composition-based stats. Identities = 15/97 (15%), Positives = 31/97 (31%), Gaps = 8/97 (8%) Query: 147 LNSVLLKLGIKPSINYYQVADFKDALARVYGVIPKIQCLPPSQDEEVQTIGQIELCLTKQ 206 + + L+ G PS + ++ + LA + + Q+ C+ Sbjct: 415 VINTLIDAGFTPSHCTHYLSALEGFLAAGVPAR-------TPTGHGLGEVQQLFGCIALA 467 Query: 207 DQQLQNCTEP-GEQPSPKQEVWLANGAAESRGLRVCE 242 + G + + GA+E R+CE Sbjct: 468 GSNVFGLAREYGYYANYVKTFRRVQGASEHTHGRLCE 504 >4WES-A nrPDB Length = 534 Score = 28.2 bits (61), Expect = 3.7, Method: Composition-based stats. Identities = 10/43 (23%), Positives = 18/43 (41%), Gaps = 1/43 (2%) Query: 162 YYQVADFKDALARVYGVIPKIQCLPPSQDEEVQTIGQIELCLT 204 + + + + YG IP I+C D V+T+ + C Sbjct: 263 HRSINYIAEMMETKYG-IPWIKCNFIGVDGIVETLRDMAKCFD 304 >4GAA-A nrPDB Length = 609 Score = 27.8 bits (60), Expect = 4.7, Method: Composition-based stats. Identities = 21/124 (16%), Positives = 36/124 (29%), Gaps = 24/124 (19%) Query: 132 KKYFGRSLELYRELDLNSVLLKLGIKPSINYYQV----------ADFKDALARVYGVIPK 181 YF +++ ++D + G+ P Y + + A G Sbjct: 426 YSYFKDKVDILDKVDWKGWMHTPGMPPVQPKYDMTLANACITLGQKWVKATESDLGSFS- 484 Query: 182 IQCLPPSQDEEVQTIGQIELCLTKQDQQLQNCTEPGEQPSPKQEVWLANGAAES----RG 237 +D + ++ L L P QEV+ N S R Sbjct: 485 ---ADDVKDLSSHQLIEVLAIL------LLEKPLPVSHVKRMQEVYNLNDVKNSEIRFRW 535 Query: 238 LRVC 241 LR+C Sbjct: 536 LRLC 539 >2F42-A nrPDB Length = 179 Score = 27.8 bits (60), Expect = 4.9, Method: Composition-based stats. Identities = 12/44 (27%), Positives = 20/44 (45%), Gaps = 1/44 (2%) Query: 148 NSVLLKLGIKPSINYYQVADFKDALARVYGVIPKIQCLPPSQDE 191 ++ + I PS Y D ++ L RV P + P +QD+ Sbjct: 113 FELMREPCITPSGITYDRKDIEEHLQRVGHFDPVTR-SPLTQDQ 155 >5LZL-A nrPDB Length = 338 Score = 27.8 bits (60), Expect = 5.0, Method: Composition-based stats. Identities = 15/121 (12%), Positives = 38/121 (31%), Gaps = 12/121 (9%) Query: 60 DYWTIHGLWPDKSEGCNRSWPFNLEEIKDLLPEMRAYWPDVIHSFPNRSRFWKH----EW 115 + + + G+ PD+ + + ++ E + + F +R + E+ Sbjct: 76 NKFILFGVLPDELKNPEGTGGYDPEGVVPRAIRLIK------EIFGDRVLVFADVCLCEY 129 Query: 116 EKHGTCAAQVDALNSQKKYFGRSLELYRELDLNSVLLKLGIKPSINYYQ--VADFKDALA 173 HG C + + +++LY + + V + + AL Sbjct: 130 TDHGHCGVVKEKRDRWYVDNDETIKLYAKEAVVYAEAGADFVAPSGMMDGQVREIRRALD 189 Query: 174 R 174 Sbjct: 190 A 190 >2OXQ-C nrPDB Length = 80 Score = 27.0 bits (58), Expect = 7.3, Method: Composition-based stats. Identities = 12/36 (33%), Positives = 17/36 (47%), Gaps = 1/36 (2%) Query: 156 IKPSINYYQVADFKDALARVYGVIPKIQCLPPSQDE 191 I PS Y D ++ L RV P + P +QD+ Sbjct: 28 ITPSGITYDRKDIEEHLQRVGHFDPVTR-SPLTQDQ 62 >2C2V-S nrPDB Length = 78 Score = 27.0 bits (58), Expect = 7.3, Method: Composition-based stats. Identities = 9/36 (25%), Positives = 15/36 (41%) Query: 148 NSVLLKLGIKPSINYYQVADFKDALARVYGVIPKIQ 183 ++ + I PS Y D ++ L RV P + Sbjct: 12 FELMREPCITPSGITYDRKDIEEHLQRVGHFNPVTR 47 >3HZZ-A nrPDB Length = 467 Score = 27.0 bits (58), Expect = 7.5, Method: Composition-based stats. Identities = 13/73 (17%), Positives = 25/73 (34%), Gaps = 4/73 (5%) Query: 155 GIKPSINYYQVADFKDALARVYGVIPKIQCLPPSQDEEVQTIG----QIELCLTKQDQQL 210 G+ P ++ V D DA+ L + T+ ++ L +D+ Sbjct: 13 GLVPRGSHMTVKDILDAIQSKDATSADFAALQLPESYRAITVHKDETEMFAGLETRDKDP 72 Query: 211 QNCTEPGEQPSPK 223 + E P P+ Sbjct: 73 RKSIHLDEVPVPE 85 >6IJO-H nrPDB Length = 155 Score = 27.0 bits (58), Expect = 7.7, Method: Composition-based stats. Identities = 12/57 (21%), Positives = 26/57 (45%), Gaps = 1/57 (1%) Query: 115 WEKHGTCAAQVDALNSQKKYFGRSLELYRELDLNSVLLKLGIKPSINYYQVADFKDA 171 W+ +G + ++Q K+F ++ ++ + L+ L +I Y + KDA Sbjct: 76 WDMYGV-DEKKRYPDNQAKFFTQATDIISRRESLRALVALSGIAAIVTYGLKGAKDA 131 Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta Posted date: Jan 3, 2023 9:05 PM Number of letters in database: 10,336,785 Number of sequences in database: 36,641 Lambda K H 0.311 0.128 0.396 Lambda K H 0.267 0.0393 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 10,556,309 Number of Sequences: 36641 Number of extensions: 408027 Number of successful extensions: 1036 Number of sequences better than 10.0: 30 Number of HSP's better than 10.0 without gapping: 35 Number of HSP's successfully gapped in prelim test: 22 Number of HSP's that attempted gapping in prelim test: 926 Number of HSP's gapped (non-prelim): 61 length of query: 256 length of database: 10,336,785 effective HSP length: 95 effective length of query: 161 effective length of database: 6,855,890 effective search space: 1103798290 effective search space used: 1103798290 T: 11 A: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.4 bits) S2: 58 (27.0 bits)