BLASTP 2.2.23 [Feb-03-2010] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= O00212 (210 letters) Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta 36,641 sequences; 10,336,785 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value 2J1L-A nrPDB 396 e-111 5C2K-A nrPDB 207 3e-54 5ZHX-e nrPDB 206 6e-54 5ZVP-A nrPDB 205 9e-54 5JCP-B nrPDB 204 2e-53 3A58-B nrPDB 203 4e-53 3TH5-A nrPDB 201 2e-52 3RYT-C nrPDB 200 4e-52 2FV8-A nrPDB 199 6e-52 2WKQ-A nrPDB 194 2e-50 1RYH-A nrPDB 191 1e-49 2W2X-A nrPDB 189 9e-49 4MIT-A nrPDB 184 3e-47 5VCU-A nrPDB 183 4e-47 3VHL-B nrPDB 182 7e-47 2ATX-A nrPDB 171 2e-43 2WBL-C nrPDB 167 2e-42 1M7B-A nrPDB 167 4e-42 1GWN-A nrPDB 166 6e-42 2NTY-C nrPDB 164 2e-41 3BWD-D nrPDB 164 3e-41 2J0V-A nrPDB 159 7e-40 3REG-A nrPDB 159 1e-39 2Q3H-A nrPDB 158 2e-39 2REX-B nrPDB 157 4e-39 4U5X-A nrPDB 155 1e-38 5HZH-A nrPDB 153 5e-38 6O62-A nrPDB 99 1e-21 2WWX-A nrPDB 99 1e-21 3L0I-B nrPDB 99 2e-21 2RHD-A nrPDB 96 1e-20 3CPH-A nrPDB 96 2e-20 1EK0-A nrPDB 95 2e-20 2OCY-C nrPDB 95 2e-20 5SZH-B nrPDB 95 3e-20 2EW1-A nrPDB 94 3e-20 4LHX-A nrPDB 93 9e-20 5SZI-A nrPDB 93 1e-19 5LPN-A nrPDB 92 1e-19 6IF2-B nrPDB 92 2e-19 5SZJ-A nrPDB 92 2e-19 2G6B-A nrPDB 92 2e-19 4M8N-E nrPDB 91 4e-19 1YZU-A nrPDB 90 5e-19 2IL1-A nrPDB 90 8e-19 5LDD-C nrPDB 89 2e-18 2OCB-A nrPDB 88 2e-18 1WMS-A nrPDB 88 2e-18 1X3S-A nrPDB 87 4e-18 4QXA-A nrPDB 87 5e-18 2N1B-A nrPDB 87 6e-18 2A5J-A nrPDB 87 7e-18 2FFQ-A nrPDB 86 1e-17 2KE5-A nrPDB 86 2e-17 4DXA-A nrPDB 85 2e-17 4RKF-A nrPDB 85 2e-17 5XOJ-A nrPDB 85 2e-17 1D5C-A nrPDB 85 2e-17 3OES-A nrPDB 85 2e-17 4FMC-F nrPDB 85 3e-17 4PHF-A nrPDB 84 3e-17 2F7S-A nrPDB 84 4e-17 4G01-B nrPDB 84 4e-17 3WYF-A nrPDB 84 4e-17 5CLL-A nrPDB 84 5e-17 5UWI-A nrPDB 84 6e-17 2HUP-A nrPDB 83 8e-17 3T5G-A nrPDB 82 1e-16 5FBL-B nrPDB 82 1e-16 4KLZ-A nrPDB 82 1e-16 2GIL-A nrPDB 82 2e-16 2FG5-A nrPDB 82 2e-16 2F9L-A nrPDB 82 2e-16 2IEY-A nrPDB 82 2e-16 2P5S-A nrPDB 82 2e-16 5YOZ-A nrPDB 82 2e-16 3CUE-F nrPDB 81 4e-16 2IEZ-A nrPDB 81 4e-16 4UJ4-A nrPDB 81 4e-16 5LEF-A nrPDB 80 6e-16 3BFK-A nrPDB 80 6e-16 1YZN-A nrPDB 80 7e-16 4KU4-A nrPDB 80 8e-16 1Z0A-A nrPDB 79 1e-15 5CM8-B nrPDB 79 1e-15 3RAB-A nrPDB 79 2e-15 3BC1-A nrPDB 78 3e-15 1Z22-A nrPDB 78 3e-15 1YVD-A nrPDB 76 8e-15 6IYB-A nrPDB 76 8e-15 1Z0F-A nrPDB 76 1e-14 4RKE-A nrPDB 76 1e-14 1TU4-A nrPDB 75 2e-14 3CPJ-B nrPDB 75 2e-14 1ZBD-A nrPDB 75 3e-14 1ZC4-A nrPDB 74 3e-14 3DZ8-A nrPDB 74 4e-14 5UB8-A nrPDB 74 4e-14 5XR6-A nrPDB 74 5e-14 2GF9-A nrPDB 74 5e-14 2ERY-A nrPDB 74 6e-14 2BMD-A nrPDB 73 9e-14 2ERX-A nrPDB 73 1e-13 4DJT-A nrPDB 73 1e-13 4KYI-B nrPDB 72 1e-13 2HEI-A nrPDB 72 2e-13 6HUF-A nrPDB 71 4e-13 3RWM-B nrPDB 70 8e-13 2O52-A nrPDB 69 2e-12 3TSO-A nrPDB 68 3e-12 3E5H-A nrPDB 65 2e-11 5XC3-A nrPDB 65 3e-11 3RAP-R nrPDB 61 3e-10 1Z06-A nrPDB 61 3e-10 2G77-B nrPDB 61 3e-10 2FN4-A nrPDB 61 4e-10 5WDQ-A nrPDB 60 6e-10 2GF0-A nrPDB 58 4e-09 5WDR-A nrPDB 57 4e-09 2ATV-A nrPDB 57 5e-09 3CLV-A nrPDB 57 6e-09 3CON-A nrPDB 57 6e-09 5UHV-A nrPDB 57 7e-09 4WA7-A nrPDB 55 2e-08 3CBQ-A nrPDB 55 2e-08 3PIR-A nrPDB 55 2e-08 4CZ2-A nrPDB 54 4e-08 6FF8-A nrPDB 54 6e-08 5C1S-A nrPDB 52 1e-07 3DPU-A nrPDB 49 1e-06 3Q85-A nrPDB 49 2e-06 2NZJ-A nrPDB 49 2e-06 3Q72-A nrPDB 48 3e-06 6HLU-A nrPDB 47 4e-06 3D6T-B nrPDB 47 4e-06 4WNR-A nrPDB 47 8e-06 2AL7-A nrPDB 45 3e-05 4ILE-A nrPDB 44 4e-05 2CJW-A nrPDB 43 8e-05 2G3Y-A nrPDB 42 1e-04 3C5C-A nrPDB 42 2e-04 3IHW-A nrPDB 39 0.002 4C0K-A nrPDB 39 0.002 2GJ9-A nrPDB 39 0.002 3LRP-A nrPDB 37 0.005 4YLG-A nrPDB 37 0.007 2YC4-C nrPDB 35 0.016 6CES-A nrPDB 35 0.025 2IWR-A nrPDB 35 0.028 2A5F-A nrPDB 35 0.030 5NZV-F nrPDB 34 0.046 3LVQ-E nrPDB 34 0.058 1YZG-A nrPDB 33 0.060 3O47-A nrPDB 33 0.071 5UF8-A nrPDB 33 0.079 6GNI-B nrPDB 33 0.083 1Z6X-A nrPDB 33 0.094 1M2O-B nrPDB 33 0.095 6FAE-B nrPDB 33 0.099 4ZI3-A nrPDB 33 0.11 4M9Q-A nrPDB 33 0.13 5DI3-B nrPDB 33 0.13 3AQ4-A nrPDB 32 0.24 2H16-A nrPDB 32 0.26 2B6H-A nrPDB 31 0.33 1MOZ-A nrPDB 31 0.36 3BH6-A nrPDB 30 0.55 1J2J-A nrPDB 30 0.70 2YYZ-A nrPDB 28 2.2 5IRR-A nrPDB 28 2.3 1SHZ-A nrPDB 28 2.4 2CC0-A nrPDB 28 2.5 2X77-A nrPDB 28 2.7 1D5A-A nrPDB 28 3.3 5KDW-A nrPDB 28 3.5 3A52-A nrPDB 28 3.5 6D2K-A nrPDB 28 3.5 1ZCB-A nrPDB 28 4.0 5KSO-A nrPDB 27 4.6 6HQW-A nrPDB 27 5.2 4LTY-C nrPDB 27 6.0 5KU1-A nrPDB 27 7.1 3PV0-A nrPDB 27 8.7 >2J1L-A nrPDB Length = 214 Score = 396 bits (1017), Expect = e-111, Method: Compositional matrix adjust. Identities = 190/191 (99%), Positives = 190/191 (99%) Query: 7 AGEEAPPGVRSVKVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMVNLQVKGKPVH 66 AGEEAPPGVRSVKVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMVNLQVKGKPVH Sbjct: 24 AGEEAPPGVRSVKVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMVNLQVKGKPVH 83 Query: 67 LHIWDTAGQDDYDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVNHFCKKVPIIV 126 LHIWDTAGQDDYDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVNHFCKKVPIIV Sbjct: 84 LHIWDTAGQDDYDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVNHFCKKVPIIV 143 Query: 127 VGCKTDLCKDKSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNVHAVFQEA 186 VGCKTDL KDKSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNVHAVFQEA Sbjct: 144 VGCKTDLRKDKSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNVHAVFQEA 203 Query: 187 AEVALSSRGRN 197 AEVALSSRGRN Sbjct: 204 AEVALSSRGRN 214 >5C2K-A nrPDB Length = 415 Score = 207 bits (527), Expect = 3e-54, Method: Compositional matrix adjust. Identities = 96/189 (50%), Positives = 126/189 (66%), Gaps = 1/189 (0%) Query: 6 AAGEEAPPGVRSVKVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMVNLQVKGKPV 65 ++G +R K+V+VGDG CGKT LL+VF+ FPE Y PTVFE Y+ +++V GK V Sbjct: 2 SSGSSGMAAIRK-KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQV 60 Query: 66 HLHIWDTAGQDDYDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVNHFCKKVPII 125 L +WDTAGQ+DYDRLRPL YPD V+L+CF + SP+S +NI +W PEV HFC VPII Sbjct: 61 ELALWDTAGQEDYDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVKHFCPNVPII 120 Query: 126 VVGCKTDLCKDKSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNVHAVFQE 185 +VG K DL D+ +L + EPV G++MA +GA Y+ECSA+ D V VF+ Sbjct: 121 LVGNKKDLRNDEHTRRELAKMKQEPVKPEEGRDMANRIGAFGYMECSAKTKDGVREVFEM 180 Query: 186 AAEVALSSR 194 A AL +R Sbjct: 181 ATRAALQAR 189 >5ZHX-e nrPDB Length = 198 Score = 206 bits (524), Expect = 6e-54, Method: Compositional matrix adjust. Identities = 94/176 (53%), Positives = 121/176 (68%) Query: 19 KVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMVNLQVKGKPVHLHIWDTAGQDDY 78 K+V+VGDG CGKT LL+VF+ FPE Y PTVFE Y+ +++V GK V L +WDTAGQ+DY Sbjct: 12 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQVELALWDTAGQEDY 71 Query: 79 DRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVNHFCKKVPIIVVGCKTDLCKDKS 138 DRLRPL YPD V+L+CF + SP+S +NI +W PEV HFC VPII+VG K DL D+ Sbjct: 72 DRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVKHFCPNVPIILVGNKKDLRNDEH 131 Query: 139 LVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNVHAVFQEAAEVALSSR 194 +L + EPV G++MA +GA Y+ECSA+ D V VF+ A AL +R Sbjct: 132 TRRELAKMKQEPVKPEEGRDMANRIGAFGYMECSAKTKDGVREVFEMATRAALQAR 187 >5ZVP-A nrPDB Length = 181 Score = 205 bits (522), Expect = 9e-54, Method: Compositional matrix adjust. Identities = 92/173 (53%), Positives = 124/173 (71%) Query: 19 KVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMVNLQVKGKPVHLHIWDTAGQDDY 78 K+V+VGDG CGKT LL+V + G FPE Y PTVFE Y+ +++V GK V L +WDTAGQ+DY Sbjct: 7 KLVIVGDGACGKTCLLIVNSKGTFPEVYVPTVFENYVADVEVDGKHVELALWDTAGQEDY 66 Query: 79 DRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVNHFCKKVPIIVVGCKTDLCKDKS 138 DRLRPL YPD+ V+L+CF + SP+S DN+ +W EV HFC+ +PII+VGCK DL D Sbjct: 67 DRLRPLSYPDSHVILICFAIDSPDSLDNVQEKWISEVLHFCQGLPIILVGCKKDLRHDPK 126 Query: 139 LVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNVHAVFQEAAEVAL 191 + +L + +PVT +G+E+ + +GA YLECSAR ++ V VF+ A AL Sbjct: 127 TIEELHKTSQKPVTPEQGEEVRKKIGAYKYLECSARTNEGVREVFEAATRAAL 179 >5JCP-B nrPDB Length = 419 Score = 204 bits (520), Expect = 2e-53, Method: Compositional matrix adjust. Identities = 96/192 (50%), Positives = 125/192 (65%) Query: 2 TAAQAAGEEAPPGVRSVKVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMVNLQVK 61 TA+ + G E K+V+VGDG CGKT LL+V + FPE Y PTVFE Y+ +++V Sbjct: 228 TASNSPGIEGLSAAIRKKLVIVGDGACGKTCLLIVNSKDQFPEVYVPTVFENYVADIEVD 287 Query: 62 GKPVHLHIWDTAGQDDYDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVNHFCKK 121 GK V L +WDTAGQ+DYDRLRPL YPD V+L+CF + SP+S +NI +W PEV HFC Sbjct: 288 GKQVELALWDTAGQEDYDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVKHFCPN 347 Query: 122 VPIIVVGCKTDLCKDKSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNVHA 181 VPII+VG K DL D+ +L + EPV G++MA +GA Y+ECSA+ D V Sbjct: 348 VPIILVGNKKDLRNDEHTRRELAKMKQEPVKPEEGRDMANRIGAFGYMECSAKTKDGVRE 407 Query: 182 VFQEAAEVALSS 193 VF+ A AL + Sbjct: 408 VFEMATRAALQA 419 >3A58-B nrPDB Length = 188 Score = 203 bits (517), Expect = 4e-53, Method: Compositional matrix adjust. Identities = 90/176 (51%), Positives = 122/176 (69%) Query: 19 KVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMVNLQVKGKPVHLHIWDTAGQDDY 78 K+V+VGDG CGKT LL+V + G FPE Y PTVFE Y+ +++V G+ V L +WDTAGQ+DY Sbjct: 12 KLVIVGDGACGKTCLLIVNSKGQFPEVYVPTVFENYVADVEVDGRRVELALWDTAGQEDY 71 Query: 79 DRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVNHFCKKVPIIVVGCKTDLCKDKS 138 DRLRPL YPD++V+L+CF + P+S +N+ +W EV HFC+ VPII+VGCK DL D Sbjct: 72 DRLRPLSYPDSNVVLICFSIDLPDSLENVQEKWIAEVLHFCQGVPIILVGCKVDLRNDPQ 131 Query: 139 LVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNVHAVFQEAAEVALSSR 194 + +LR+ G +PVT GQ +A +GA Y ECSA+ V VF+ A +L + Sbjct: 132 TIEQLRQEGQQPVTSQEGQSVADQIGATGYYECSAKTGYGVREVFEAATRASLMGK 187 >3TH5-A nrPDB Length = 204 Score = 201 bits (510), Expect = 2e-52, Method: Compositional matrix adjust. Identities = 92/176 (52%), Positives = 116/176 (65%) Query: 16 RSVKVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMVNLQVKGKPVHLHIWDTAGQ 75 +++K V+VGDG GKT LL+ + AFP Y PTVF+ Y N+ V GKPV+L +WDTAGQ Sbjct: 29 QAIKCVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDGKPVNLGLWDTAGQ 88 Query: 76 DDYDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVNHFCKKVPIIVVGCKTDLCK 135 +DYDRLRPL YP V L+CF + SP SF+N+ +WYPEV H C PII+VG K DL Sbjct: 89 EDYDRLRPLSYPQTDVFLICFSLVSPASFENVRAKWYPEVRHHCPNTPIILVGTKLDLRD 148 Query: 136 DKSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNVHAVFQEAAEVAL 191 DK + KL+ L P+TY +G MA+ +GAV YLECSA + VF EA L Sbjct: 149 DKDTIEKLKEKKLTPITYPQGLAMAKEIGAVKYLECSALTQRGLKTVFDEAIRAVL 204 >3RYT-C nrPDB Length = 180 Score = 200 bits (508), Expect = 4e-52, Method: Compositional matrix adjust. Identities = 92/179 (51%), Positives = 117/179 (65%) Query: 13 PGVRSVKVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMVNLQVKGKPVHLHIWDT 72 P ++++K V+VGDG GKT LL+ + AFP Y PTVF+ Y N+ V GKPV+L +WDT Sbjct: 2 PHMQAIKCVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDGKPVNLGLWDT 61 Query: 73 AGQDDYDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVNHFCKKVPIIVVGCKTD 132 AG +DYDRLRPL YP V L+CF + SP SF+N+ +WYPEV H C PII+VG K D Sbjct: 62 AGLEDYDRLRPLSYPQTDVFLICFSLVSPASFENVRAKWYPEVRHHCPNTPIILVGTKLD 121 Query: 133 LCKDKSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNVHAVFQEAAEVAL 191 L DK + KL+ L P+TY +G MA+ +GAV YLECSA + VF EA L Sbjct: 122 LRDDKDTIEKLKEKKLTPITYPQGLAMAKEIGAVKYLECSALTQRGLKTVFDEAIRAVL 180 >2FV8-A nrPDB Length = 207 Score = 199 bits (507), Expect = 6e-52, Method: Compositional matrix adjust. Identities = 94/176 (53%), Positives = 118/176 (67%) Query: 19 KVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMVNLQVKGKPVHLHIWDTAGQDDY 78 K+V+VGDG CGKT LL+VF+ FPE Y PTVFE Y+ +++V GK V L +WDTAGQ+DY Sbjct: 27 KLVVVGDGACGKTCLLIVFSKDEFPEVYVPTVFENYVADIEVDGKQVELALWDTAGQEDY 86 Query: 79 DRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVNHFCKKVPIIVVGCKTDLCKDKS 138 DRLRPL YPD V+L+CF V SP+S +NI +W PEV HFC VPII+V K DL D+ Sbjct: 87 DRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWVPEVKHFCPNVPIILVANKKDLRSDEH 146 Query: 139 LVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNVHAVFQEAAEVALSSR 194 + +L R EPV G+ MA + A YLECSA+ + V VF+ A AL R Sbjct: 147 VRTELARMKQEPVRTDDGRAMAVRIQAYDYLECSAKTKEGVREVFETATRAALQKR 202 >2WKQ-A nrPDB Length = 332 Score = 194 bits (494), Expect = 2e-50, Method: Compositional matrix adjust. Identities = 90/174 (51%), Positives = 112/174 (64%) Query: 18 VKVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMVNLQVKGKPVHLHIWDTAGQDD 77 +K V+VGDG GKT LL+ + AFP Y PTVF+ Y N+ V GKPV+L +WDTAG +D Sbjct: 156 IKCVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDGKPVNLGLWDTAGLED 215 Query: 78 YDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVNHFCKKVPIIVVGCKTDLCKDK 137 YDRLRPL YP V L+CF + SP SF ++ +WYPEV H C PII+VG K DL DK Sbjct: 216 YDRLRPLSYPQTDVFLICFSLVSPASFHHVRAKWYPEVRHHCPNTPIILVGTKLDLRDDK 275 Query: 138 SLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNVHAVFQEAAEVAL 191 + KL+ L P+TY +G MA+ +GAV YLECSA + VF EA L Sbjct: 276 DTIEKLKEKKLTPITYPQGLAMAKEIGAVKYLECSALTQRGLKTVFDEAIRAVL 329 >1RYH-A nrPDB Length = 203 Score = 191 bits (486), Expect = 1e-49, Method: Compositional matrix adjust. Identities = 93/196 (47%), Positives = 118/196 (60%), Gaps = 19/196 (9%) Query: 15 VRSVKVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMVNLQVKGKPVHLHIWDTAG 74 ++++K V+VGDG GKT LL+ + AFP Y PTVF+ Y N+ V GKPV+L +WDTAG Sbjct: 3 MQAIKCVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDGKPVNLGLWDTAG 62 Query: 75 QDDYDRLRPLFYPD-------------------ASVLLLCFDVTSPNSFDNIFNRWYPEV 115 Q+DYDRLRPL YP A V L+CF + SP SF+N+ +WYPEV Sbjct: 63 QEDYDRLRPLSYPQTVGETYGKDITSRGKDKPIADVFLICFSLVSPASFENVRAKWYPEV 122 Query: 116 NHFCKKVPIIVVGCKTDLCKDKSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARL 175 H C PII+VG K DL DK + KL+ L P+TY +G MA+ +GAV YLECSA Sbjct: 123 RHHCPNTPIILVGTKLDLRDDKDTIEKLKEKKLTPITYPQGLAMAKEIGAVKYLECSALT 182 Query: 176 HDNVHAVFQEAAEVAL 191 + VF EA L Sbjct: 183 QRGLKTVFDEAIRAVL 198 >2W2X-A nrPDB Length = 185 Score = 189 bits (479), Expect = 9e-49, Method: Compositional matrix adjust. Identities = 86/178 (48%), Positives = 114/178 (64%) Query: 14 GVRSVKVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMVNLQVKGKPVHLHIWDTA 73 G +++K V+VGD GKT LL+ + AFP Y PTVF+ Y N+ V KPV+L +WDTA Sbjct: 6 GSQAIKCVVVGDVAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDSKPVNLGLWDTA 65 Query: 74 GQDDYDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVNHFCKKVPIIVVGCKTDL 133 GQ+DYDRLRPL YP V L+CF + SP S++N+ +W+PEV H C PII+VG K DL Sbjct: 66 GQEDYDRLRPLSYPQTDVFLICFSLVSPASYENVRAKWFPEVRHHCPSTPIILVGTKLDL 125 Query: 134 CKDKSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNVHAVFQEAAEVAL 191 DK + KL+ L P+TY +G +A+ + +V YLECSA + VF EA L Sbjct: 126 RDDKDTIEKLKEKKLAPITYPQGLALAKEIDSVKYLECSALTQRGLKTVFDEAIRAVL 183 >4MIT-A nrPDB Length = 186 Score = 184 bits (467), Expect = 3e-47, Method: Compositional matrix adjust. Identities = 81/175 (46%), Positives = 117/175 (66%) Query: 17 SVKVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMVNLQVKGKPVHLHIWDTAGQD 76 S+K+V+VGDG GKT LL+ ++ FPE Y PTVF+ Y+V+L + + L +WDTAG + Sbjct: 10 SIKLVVVGDGAVGKTCLLISYSIRKFPEDYIPTVFDNYVVSLTAGTRQIQLALWDTAGLE 69 Query: 77 DYDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVNHFCKKVPIIVVGCKTDLCKD 136 +YD+LRPL Y AS+ L+CF VTS S+DN+ +W+PEV HF KVPII+VG K D D Sbjct: 70 EYDQLRPLSYSSASIFLICFSVTSSVSYDNVITKWHPEVIHFAPKVPIILVGTKLDTRND 129 Query: 137 KSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNVHAVFQEAAEVAL 191 ++V +L G+ + +G+E+ + AV Y+ECSA+ +N+ VF EA + L Sbjct: 130 PAIVKRLTEQGMTVINTAKGEELKNRIKAVKYIECSAKTSENLKTVFDEAVKTVL 184 >5VCU-A nrPDB Length = 208 Score = 183 bits (465), Expect = 4e-47, Method: Compositional matrix adjust. Identities = 81/183 (44%), Positives = 118/183 (64%) Query: 15 VRSVKVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMVNLQVKGKPVHLHIWDTAG 74 + S+K V+VGDG GKT+LL+ ++ G FPE Y PTVF+ Y N+ V + ++DTAG Sbjct: 9 MESIKCVVVGDGAVGKTALLIAYSSGCFPEDYVPTVFDNYNKNIPYGDGIVSIALYDTAG 68 Query: 75 QDDYDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVNHFCKKVPIIVVGCKTDLC 134 Q+DYDRLRPL YPD V L+CF + +PNS +N ++W E+ H+ PI++VG K DL Sbjct: 69 QEDYDRLRPLSYPDTDVFLVCFSLENPNSLENCHSKWAEELKHYNPDTPIVLVGTKLDLK 128 Query: 135 KDKSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNVHAVFQEAAEVALSSR 194 KD+ V KL+ + PVT +GQEM + A Y+ECSA+ +N+ F A ++A+ R Sbjct: 129 KDEEYVKKLKEKKISPVTTEQGQEMKDKIKACGYIECSAKTMENLTEAFNMAIDIAMKQR 188 Query: 195 GRN 197 ++ Sbjct: 189 LKD 191 >3VHL-B nrPDB Length = 195 Score = 182 bits (463), Expect = 7e-47, Method: Compositional matrix adjust. Identities = 84/194 (43%), Positives = 117/194 (60%) Query: 8 GEEAPPGVRSVKVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMVNLQVKGKPVHL 67 G G++++K V+VGDG GK LL+ + FP Y PTVF+ Y V + + G+P L Sbjct: 1 GSSGSSGMQTIKCVVVGDGAVGKNCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTL 60 Query: 68 HIWDTAGQDDYDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVNHFCKKVPIIVV 127 ++DTAGQ+DYDRLRPL YP V L+CF V SP+SF+N+ +W PE+ H C K P ++V Sbjct: 61 GLFDTAGQEDYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHCPKTPFLLV 120 Query: 128 GCKTDLCKDKSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNVHAVFQEAA 187 G + DL D S + KL +N +P+T +++AR + AV Y+ECSA + VF EA Sbjct: 121 GTQIDLRDDPSTIEKLAKNKQKPITPETAEKLARDLKAVKYVECSALTQKGLKNVFDEAI 180 Query: 188 EVALSSRGRNFWRR 201 AL RR Sbjct: 181 LAALEPPEPKKSRR 194 >2ATX-A nrPDB Length = 194 Score = 171 bits (432), Expect = 2e-43, Method: Compositional matrix adjust. Identities = 79/174 (45%), Positives = 109/174 (62%) Query: 13 PGVRSVKVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMVNLQVKGKPVHLHIWDT 72 PG +K V+VGDG GKT LLM +A+ AFPE Y PTVF+ Y V++ V GK L ++DT Sbjct: 14 PGALMLKCVVVGDGAVGKTCLLMSYANDAFPEEYVPTVFDHYAVSVTVGGKQYLLGLYDT 73 Query: 73 AGQDDYDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVNHFCKKVPIIVVGCKTD 132 AGQ+DYDRLRPL YP V L+CF V +P SF N+ W PE+ + VP +++G + D Sbjct: 74 AGQEDYDRLRPLSYPMTDVFLICFSVVNPASFQNVKEEWVPELKEYAPNVPFLLIGTQID 133 Query: 133 LCKDKSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNVHAVFQEA 186 L D + +L +P+ +GQ++A+ +GA Y+ECSA + VF EA Sbjct: 134 LRDDPKTLARLNDMKEKPICVEQGQKLAKEIGACCYVECSALTQKGLKTVFDEA 187 >2WBL-C nrPDB Length = 180 Score = 167 bits (424), Expect = 2e-42, Method: Compositional matrix adjust. Identities = 80/176 (45%), Positives = 109/176 (61%), Gaps = 2/176 (1%) Query: 16 RSVKVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMVNLQVKGKPVHLHIWDTAGQ 75 R +K V VGDG GKT +L+ + FP Y PTVF+ + N+ V G V+L +WDTAGQ Sbjct: 5 RFIKCVTVGDGAVGKTCMLISYTGNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWDTAGQ 64 Query: 76 DDYDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVNHFCKKVPIIVVGCKTDLCK 135 +DY+RLRPL Y A V LL F + S S++NI +W PE+ H+ +PI++VG K DL Sbjct: 65 EDYNRLRPLSYRGADVFLLAFSLISKASYENIHKKWLPELKHYAPGIPIVLVGTKLDLRD 124 Query: 136 DKSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNVHAVFQEAAEVAL 191 DK + G +T +G+E+ + +GAV YLECS++ NV AVF A VAL Sbjct: 125 DKQFLKD--HPGAASITTAQGEELRKMIGAVRYLECSSKTQQNVKAVFDTAIRVAL 178 >1M7B-A nrPDB Length = 184 Score = 167 bits (422), Expect = 4e-42, Method: Compositional matrix adjust. Identities = 73/170 (42%), Positives = 109/170 (64%), Gaps = 1/170 (0%) Query: 19 KVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMVNLQVKGKPVHLHIWDTAGQDDY 78 K+V+VGD CGKT+LL VFA FPE+Y PTVFE Y + ++ + + L +WDT+G Y Sbjct: 9 KIVVVGDSQCGKTALLHVFAKDCFPENYVPTVFENYTASFEIDTQRIELSLWDTSGSPYY 68 Query: 79 DRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVNHFCKKVPIIVVGCKTDLCKDKS 138 D +RPL YPD+ +L+CFD++ P + D++ +W E+ FC +++VGCK+DL D S Sbjct: 69 DNVRPLSYPDSDAVLICFDISRPETLDSVLKKWKGEIQEFCPNTKMLLVGCKSDLRTDVS 128 Query: 139 LVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDN-VHAVFQEAA 187 + +L + PV+Y +G MA+ +GA Y+ECSA +N V +F A Sbjct: 129 TLVELSNHRQTPVSYDQGANMAKQIGAATYIECSALQSENSVRDIFHVAT 178 >1GWN-A nrPDB Length = 205 Score = 166 bits (420), Expect = 6e-42, Method: Compositional matrix adjust. Identities = 73/170 (42%), Positives = 109/170 (64%), Gaps = 1/170 (0%) Query: 19 KVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMVNLQVKGKPVHLHIWDTAGQDDY 78 K+V+VGD CGKT+LL VFA FPE+Y PTVFE Y + ++ + + L +WDT+G Y Sbjct: 30 KIVVVGDSQCGKTALLHVFAKDCFPENYVPTVFENYTASFEIDTQRIELSLWDTSGSPYY 89 Query: 79 DRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVNHFCKKVPIIVVGCKTDLCKDKS 138 D +RPL YPD+ +L+CFD++ P + D++ +W E+ FC +++VGCK+DL D S Sbjct: 90 DNVRPLSYPDSDAVLICFDISRPETLDSVLKKWKGEIQEFCPNTKMLLVGCKSDLRTDVS 149 Query: 139 LVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDN-VHAVFQEAA 187 + +L + PV+Y +G MA+ +GA Y+ECSA +N V +F A Sbjct: 150 TLVELSNHRQTPVSYDQGANMAKQIGAATYIECSALQSENSVRDIFHVAT 199 >2NTY-C nrPDB Length = 180 Score = 164 bits (415), Expect = 2e-41, Method: Compositional matrix adjust. Identities = 77/176 (43%), Positives = 110/176 (62%), Gaps = 2/176 (1%) Query: 16 RSVKVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMVNLQVKGKPVHLHIWDTAGQ 75 R +K V VGDG GKT +L+ + FP Y PTVF+ + N+ V G V+L +WDTAGQ Sbjct: 5 RFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGNTVNLGLWDTAGQ 64 Query: 76 DDYDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVNHFCKKVPIIVVGCKTDLCK 135 +DY+RLRPL Y A V +L F + S S++N+ +W PE+ H+ VPII+VG K DL Sbjct: 65 EDYNRLRPLSYRGADVFILAFSLISKASYENVAKKWIPELRHYAPGVPIILVGTKLDLRD 124 Query: 136 DKSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNVHAVFQEAAEVAL 191 DK + G P+T ++G+E+ + +G+ Y+ECS++ NV AVF A +V L Sbjct: 125 DKQFF--IDHPGAVPITTNQGEELKKLIGSPIYIECSSKTQQNVKAVFDAAIKVVL 178 >3BWD-D nrPDB Length = 182 Score = 164 bits (415), Expect = 3e-41, Method: Compositional matrix adjust. Identities = 78/176 (44%), Positives = 109/176 (61%), Gaps = 2/176 (1%) Query: 16 RSVKVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMVNLQVKGKPVHLHIWDTAGQ 75 R +K V VGDG GKT LL+ + FP Y PTVF+ + N+ V G V+L +WDTAGQ Sbjct: 7 RFIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVNGATVNLGLWDTAGQ 66 Query: 76 DDYDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVNHFCKKVPIIVVGCKTDLCK 135 +DY+RLRPL Y A V +L F + S S++N+ +W PE+ H+ VPI++VG K DL Sbjct: 67 EDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGVPIVLVGTKLDLRD 126 Query: 136 DKSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNVHAVFQEAAEVAL 191 DK + G P+T +G+E+ + +GA AY+ECS++ +NV VF A V L Sbjct: 127 DKQFF--IDHPGAVPITTVQGEELKKLIGAPAYIECSSKSQENVKGVFDAAIRVVL 180 >2J0V-A nrPDB Length = 212 Score = 159 bits (402), Expect = 7e-40, Method: Compositional matrix adjust. Identities = 74/174 (42%), Positives = 107/174 (61%), Gaps = 4/174 (2%) Query: 18 VKVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMVNLQVKGKPVHLHIWDTAGQDD 77 +K V VGDG GKT +L+ + FP Y PTVF+ + N+ V G+ V+L +WDTAGQ+D Sbjct: 10 IKCVTVGDGAVGKTCMLICYTSNKFPTDYIPTVFDNFSANVAVDGQIVNLGLWDTAGQED 69 Query: 78 YDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVNHFCKKVPIIVVGCKTDLCKDK 137 Y RLRPL Y A + +L F + S S++N+ +W PE+ F VPI++VG K DL DK Sbjct: 70 YSRLRPLSYRGADIFVLAFSLISKASYENVLKKWMPELRRFAPNVPIVLVGTKLDLRDDK 129 Query: 138 SLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNVHAVFQEAAEVAL 191 + + +T +G+E+ + +GA AY+ECS++ NV AVF A +V L Sbjct: 130 GYLA----DHTNVITSTQGEELRKQIGAAAYIECSSKTQQNVKAVFDTAIKVVL 179 >3REG-A nrPDB Length = 194 Score = 159 bits (401), Expect = 1e-39, Method: Compositional matrix adjust. Identities = 73/181 (40%), Positives = 113/181 (62%), Gaps = 10/181 (5%) Query: 14 GVRSVKVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMVNLQVKGKPVHLHIWDTA 73 G +++K+V+VGDG GKT LL+ F+ G P +Y PTVFE + ++ K + LH+WDTA Sbjct: 20 GKKALKIVVVGDGAVGKTCLLLAFSKGEIPTAYVPTVFENFSHVMKYKNEEFILHLWDTA 79 Query: 74 GQDDYDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVNHFCKKVPIIVVGCKTDL 133 GQ++YDRLRPL Y D+ V+LLCF V + SFDNI +W PE+ H+ ++VG K D Sbjct: 80 GQEEYDRLRPLSYADSDVVLLCFAVNNRTSFDNISTKWEPEIKHYIDTAKTVLVGLKVD- 138 Query: 134 CKDKSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNVHAVFQEAAEVALSS 193 LR++G + VT G ++ + +G VAY+E S+ ++ VF+++ + S+ Sbjct: 139 ---------LRKDGSDDVTKQEGDDLCQKLGCVAYIEASSVAKIGLNEVFEKSVDCIFSN 189 Query: 194 R 194 + Sbjct: 190 K 190 >2Q3H-A nrPDB Length = 201 Score = 158 bits (399), Expect = 2e-39, Method: Compositional matrix adjust. Identities = 72/169 (42%), Positives = 105/169 (62%) Query: 18 VKVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMVNLQVKGKPVHLHIWDTAGQDD 77 VK VLVGDG GKTSL++ + +P Y PT F+ + + V G+PV L + DTAGQD+ Sbjct: 21 VKCVLVGDGAVGKTSLVVSYTTNGYPTEYIPTAFDNFSAVVSVDGRPVRLQLCDTAGQDE 80 Query: 78 YDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVNHFCKKVPIIVVGCKTDLCKDK 137 +D+LRPL Y + + LLCF V SP+SF N+ +W PE+ C K PII+VG ++DL +D Sbjct: 81 FDKLRPLCYTNTDIFLLCFSVVSPSSFQNVSEKWVPEIRCHCPKAPIILVGTQSDLREDV 140 Query: 138 SLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNVHAVFQEA 186 ++ +L + +PV + +A + A +Y+ECSA N+ VF A Sbjct: 141 KVLIELDKCKEKPVPEEAAKLLAEEIKAASYIECSALTQKNLKEVFDAA 189 >2REX-B nrPDB Length = 197 Score = 157 bits (397), Expect = 4e-39, Method: Compositional matrix adjust. Identities = 73/186 (39%), Positives = 114/186 (61%), Gaps = 1/186 (0%) Query: 8 GEEAPPGVRSVKVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMVNLQVKGKPVHL 67 G P V K+VLVGD CGKT++L V A +PE+Y PTVFE Y L+ + + V L Sbjct: 1 GRAPQPVVARCKLVLVGDVQCGKTAMLQVLAKDCYPETYVPTVFENYTACLETEEQRVEL 60 Query: 68 HIWDTAGQDDYDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVNHFCKKVPIIVV 127 +WDT+G YD +RPL Y D+ +LLCFD++ P + D+ +W E+ +C ++++ Sbjct: 61 SLWDTSGSPYYDNVRPLCYSDSDAVLLCFDISRPETVDSALKKWRTEILDYCPSTRVLLI 120 Query: 128 GCKTDLCKDKSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHD-NVHAVFQEA 186 GCKTDL D S + +L P++Y +G +A+ +GA YLE SA + ++H++F+ A Sbjct: 121 GCKTDLRTDLSTLMELSHQKQAPISYEQGCAIAKQLGAEIYLEGSAFTSEKSIHSIFRTA 180 Query: 187 AEVALS 192 + + L+ Sbjct: 181 SMLCLN 186 >4U5X-A nrPDB Length = 178 Score = 155 bits (393), Expect = 1e-38, Method: Compositional matrix adjust. Identities = 73/176 (41%), Positives = 110/176 (62%), Gaps = 2/176 (1%) Query: 16 RSVKVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMVNLQVKGKPVHLHIWDTAGQ 75 R +K V VGDG GKT +L+ + FP Y PTVF+ + N+ V G V+L +WDTAG Sbjct: 4 RFIKCVTVGDGAVGKTCMLICYTSNKFPTDYIPTVFDNFSANVSVDGSVVNLGLWDTAGL 63 Query: 76 DDYDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVNHFCKKVPIIVVGCKTDLCK 135 +DY RLRPL Y A V +L F + S S++N+ +W PE+ F VP+++VG K DL + Sbjct: 64 EDYSRLRPLSYRGADVFILSFSLISRASYENVQKKWMPELRRFAPGVPVVLVGTKLDLRE 123 Query: 136 DKSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNVHAVFQEAAEVAL 191 D++ + + + +T +G+E+ + +GAVAY+ECS++ N+ AVF A +V L Sbjct: 124 DRAYLADHPASSI--ITTEQGEELRKLIGAVAYIECSSKTQRNIKAVFDTAIKVVL 177 >5HZH-A nrPDB Length = 332 Score = 153 bits (387), Expect = 5e-38, Method: Compositional matrix adjust. Identities = 69/130 (53%), Positives = 85/130 (65%) Query: 62 GKPVHLHIWDTAGQDDYDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVNHFCKK 121 GKPV+L +WDTAG +DYDRLRPL YP V L+CF + SP SF+N+ +WYPEV H C Sbjct: 200 GKPVNLGLWDTAGLEDYDRLRPLSYPQTDVFLICFSLVSPASFENVRAKWYPEVRHHCPN 259 Query: 122 VPIIVVGCKTDLCKDKSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNVHA 181 PII+VG K DL DK + KL+ L P+TY +G MA+ +GAV YLECSA + Sbjct: 260 TPIILVGTKLDLRDDKDTIEKLKEKKLTPITYPQGLAMAKEIGAVKYLECSALTQRGLKT 319 Query: 182 VFQEAAEVAL 191 VF EA L Sbjct: 320 VFDEAIRAVL 329 Score = 53.1 bits (126), Expect = 9e-08, Method: Compositional matrix adjust. Identities = 23/48 (47%), Positives = 32/48 (66%) Query: 15 VRSVKVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMVNLQVKG 62 ++++K V+VGDG GKT LL+ + AFP Y PTVF+ Y N+ V G Sbjct: 4 MQAIKCVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDG 51 >6O62-A nrPDB Length = 184 Score = 99.4 bits (246), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 58/173 (33%), Positives = 97/173 (56%), Gaps = 14/173 (8%) Query: 18 VKVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMV-NLQVKGKPVHLHIWDTAGQD 76 +K++LVGD G GK+ LL+ F + F S+ T+ + + ++ KGK + L +WDTAGQ+ Sbjct: 15 MKLLLVGDSGVGKSCLLLRFVEDKFNPSFITTIGIDFKIRTIESKGKRIKLQVWDTAGQE 74 Query: 77 DYDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVNHFCKKVPIIVVGCKTDLCKD 136 + + +Y A ++L +DVT SF+N+ N + H + I +VG K C D Sbjct: 75 RFRTITTAYYRGAMGIVLIYDVTDSRSFENVENWFQTVTQHANEDAQIFLVGNK---CDD 131 Query: 137 KSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNVHAVFQEAAEV 189 + VN+ V+ +GQE+A + V +LE SA+ ++NV ++F E A + Sbjct: 132 E--VNR-------QVSKEQGQELAAKLN-VPFLEASAKSNENVDSIFYELASI 174 >2WWX-A nrPDB Length = 175 Score = 98.6 bits (244), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 59/174 (33%), Positives = 95/174 (54%), Gaps = 17/174 (9%) Query: 19 KVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMV-NLQVKGKPVHLHIWDTAGQDD 77 K++L+GD G GK+ LL+ FAD + ESY T+ + + +++ GK + L IWDTAGQ+ Sbjct: 10 KLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQER 69 Query: 78 YDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVNHFC-KKVPIIVVGCKTDLCKD 136 + + +Y A +++ +DVT SF+N+ +W E++ + + V ++VG K DL Sbjct: 70 FRTITSSYYRGAHGIIVVYDVTDQESFNNV-KQWLQEIDRYASENVNKLLVGIKCDLTTK 128 Query: 137 KSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNVHAVFQE-AAEV 189 K V Y +E A S+G + +LE SA+ NV F AAE+ Sbjct: 129 K------------VVDYTTAKEFADSLG-IPFLETSAKNATNVEQSFMTMAAEI 169 >3L0I-B nrPDB Length = 199 Score = 98.6 bits (244), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 59/174 (33%), Positives = 95/174 (54%), Gaps = 17/174 (9%) Query: 19 KVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMV-NLQVKGKPVHLHIWDTAGQDD 77 K++L+GD G GK+ LL+ FAD + ESY T+ + + +++ GK + L IWDTAGQ+ Sbjct: 35 KLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQER 94 Query: 78 YDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVNHFC-KKVPIIVVGCKTDLCKD 136 + + +Y A +++ +DVT SF+N+ +W E++ + + V ++VG K DL Sbjct: 95 FRTITSSYYRGAHGIIVVYDVTDQESFNNV-KQWLQEIDRYASENVNKLLVGNKCDLTTK 153 Query: 137 KSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNVHAVFQE-AAEV 189 K V Y +E A S+G + +LE SA+ NV F AAE+ Sbjct: 154 K------------VVDYTTAKEFADSLG-IPFLETSAKNATNVEQSFMTMAAEI 194 >2RHD-A nrPDB Length = 175 Score = 95.9 bits (237), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 56/171 (32%), Positives = 93/171 (54%), Gaps = 16/171 (9%) Query: 19 KVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMV-NLQVKGKPVHLHIWDTAGQDD 77 K++L+GD G GK+ LL+ FAD + +SY T+ + + + ++ K V L IWDTAGQ+ Sbjct: 11 KLLLIGDSGVGKSCLLLRFADDTYTDSYISTIGVDFKIRTISLENKTVKLQIWDTAGQER 70 Query: 78 YDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVNHFC-KKVPIIVVGCKTDLCKD 136 + + +Y A +++ +DVT +SFDN+ +W E++ + + V ++VG K DL Sbjct: 71 FRTITSSYYRGAHGIIIVYDVTDRDSFDNV-KQWIQEIDRYAMENVNKLLVGNKCDLVSK 129 Query: 137 KSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNVHAVFQEAA 187 + VT G+E+A S G + ++E SA+ NV F A Sbjct: 130 R------------VVTSDEGRELADSHG-IKFIETSAKNAYNVEQAFHTMA 167 >3CPH-A nrPDB Length = 213 Score = 95.5 bits (236), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 52/168 (30%), Positives = 93/168 (55%), Gaps = 17/168 (10%) Query: 18 VKVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMV-NLQVKGKPVHLHIWDTAGQD 76 +K++L+GD G GK+ LL+ F + F S+ T+ + + + + GK V L +WDTAGQ+ Sbjct: 21 MKILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGKKVKLQLWDTAGQE 80 Query: 77 DYDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVN-HFCKKVPIIVVGCKTDLCK 135 + + +Y A ++L +DVT +F NI +W+ VN H + +++VG K+D+ Sbjct: 81 RFRTITTAYYRGAMGIILVYDVTDERTFTNI-KQWFKTVNEHANDEAQLLLVGNKSDMET 139 Query: 136 DKSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNVHAVF 183 VT +G+ +A+ +G + ++E SA+ DNV+ +F Sbjct: 140 -------------RVVTADQGEALAKELG-IPFIESSAKNDDNVNEIF 173 >1EK0-A nrPDB Length = 170 Score = 94.7 bits (234), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 54/171 (31%), Positives = 89/171 (52%), Gaps = 13/171 (7%) Query: 15 VRSVKVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMVN-LQVKGKPVHLHIWDTA 73 V S+K+VL+G+ GK+S+++ F F E+ PT+ ++ + + V IWDTA Sbjct: 1 VTSIKLVLLGEAAVGKSSIVLRFVSNDFAENKEPTIGAAFLTQRVTINEHTVKFEIWDTA 60 Query: 74 GQDDYDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVN-HFCKKVPIIVVGCKTD 132 GQ+ + L P++Y +A L+ +DVT P SF W E++ K + I +VG K D Sbjct: 61 GQERFASLAPMYYRNAQAALVVYDVTKPQSFIKA-RHWVKELHEQASKDIIIALVGNKID 119 Query: 133 LCKDKSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNVHAVF 183 + L+ G V G+++A G + + E SA+ +NV+ VF Sbjct: 120 M---------LQEGGERKVAREEGEKLAEEKG-LLFFETSAKTGENVNDVF 160 >2OCY-C nrPDB Length = 170 Score = 94.7 bits (234), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 52/168 (30%), Positives = 93/168 (55%), Gaps = 17/168 (10%) Query: 18 VKVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMV-NLQVKGKPVHLHIWDTAGQD 76 +K++L+GD G GK+ LL+ F + F S+ T+ + + + + GK V L +WDTAGQ+ Sbjct: 4 MKILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGKKVKLQLWDTAGQE 63 Query: 77 DYDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVN-HFCKKVPIIVVGCKTDLCK 135 + + +Y A ++L +DVT +F NI +W+ VN H + +++VG K+D+ Sbjct: 64 RFRTITTAYYRGAMGIILVYDVTDERTFTNI-KQWFKTVNEHANDEAQLLLVGNKSDM-- 120 Query: 136 DKSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNVHAVF 183 VT +G+ +A+ +G + ++E SA+ DNV+ +F Sbjct: 121 -----------ETRVVTADQGEALAKELG-IPFIESSAKNDDNVNEIF 156 >5SZH-B nrPDB Length = 203 Score = 94.7 bits (234), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 57/174 (32%), Positives = 95/174 (54%), Gaps = 17/174 (9%) Query: 19 KVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMV-NLQVKGKPVHLHIWDTAGQDD 77 K++L+GD G GK+ LL+ FAD + ESY T+ + + +++ GK + L IWDTAGQ+ Sbjct: 12 KLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQER 71 Query: 78 YDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVNHFC-KKVPIIVVGCKTDLCKD 136 + + +Y A +++ +DVT S+ N+ +W E++ + + V ++VG K+DL Sbjct: 72 FRTITSSYYRGAHGIIVVYDVTDQESYANV-KQWLQEIDRYASENVNKLLVGNKSDLTTK 130 Query: 137 KSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNVHAVFQE-AAEV 189 K + N +E A S+G + +LE SA+ NV F AAE+ Sbjct: 131 KVVDNTT------------AKEFADSLG-IPFLETSAKNATNVEQAFMTMAAEI 171 >2EW1-A nrPDB Length = 201 Score = 94.4 bits (233), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 55/171 (32%), Positives = 88/171 (51%), Gaps = 16/171 (9%) Query: 19 KVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMV-NLQVKGKPVHLHIWDTAGQDD 77 K+VL+G+ G GKT L+ F G FP T+ +M+ +++ G+ V L IWDTAGQ+ Sbjct: 28 KIVLIGNAGVGKTCLVRRFTQGLFPPGQGATIGVDFMIKTVEINGEKVKLQIWDTAGQER 87 Query: 78 YDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVNHFC-KKVPIIVVGCKTDLCKD 136 + + +Y A+ L+L +D+T SF W E+ + KV ++VG K DL + Sbjct: 88 FRSITQSYYRSANALILTYDITCEESF-RCLPEWLREIEQYASNKVITVLVGNKIDLAER 146 Query: 137 KSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNVHAVFQEAA 187 + V+ R +E + + + YLE SA+ DNV +F + A Sbjct: 147 RE------------VSQQRAEEFSEA-QDMYYLETSAKESDNVEKLFLDLA 184 >4LHX-A nrPDB Length = 186 Score = 92.8 bits (229), Expect = 9e-20, Method: Compositional matrix adjust. Identities = 52/167 (31%), Positives = 90/167 (53%), Gaps = 16/167 (9%) Query: 19 KVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMV-NLQVKGKPVHLHIWDTAGQDD 77 K++L+GD G GKT +L F++ AF ++ T+ + + +++ GK + L IWDTAGQ+ Sbjct: 12 KLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKRIKLQIWDTAGQER 71 Query: 78 YDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEV-NHFCKKVPIIVVGCKTDLCKD 136 + + +Y A ++L +D+T+ SFDNI N W + H V +++G K D+ Sbjct: 72 FRTITTAYYRGAMGIMLVYDITNEKSFDNIRN-WIRNIEEHASADVEKMILGNKCDV--- 127 Query: 137 KSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNVHAVF 183 N V+ RG+++A G + ++E SA+ + NV F Sbjct: 128 ---------NDKRQVSKERGEKLALDYG-IKFMETSAKANINVENAF 164 >5SZI-A nrPDB Length = 209 Score = 92.8 bits (229), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 52/167 (31%), Positives = 90/167 (53%), Gaps = 16/167 (9%) Query: 19 KVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMV-NLQVKGKPVHLHIWDTAGQDD 77 K++L+GD G GKT +L F++ AF ++ T+ + + +++ GK + L IWDTAGQ+ Sbjct: 12 KLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKRIKLQIWDTAGQER 71 Query: 78 YDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEV-NHFCKKVPIIVVGCKTDLCKD 136 + + +Y A ++L +D+T+ SFDNI N W + H V +++G K D+ Sbjct: 72 FRTITTAYYRGAMGIMLVYDITNEKSFDNIRN-WIRNIEEHASADVEKMILGNKCDV--- 127 Query: 137 KSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNVHAVF 183 N V+ RG+++A G + ++E SA+ + NV F Sbjct: 128 ---------NDKRQVSKERGEKLALDYG-IKFMETSAKANINVENAF 164 >5LPN-A nrPDB Length = 177 Score = 92.4 bits (228), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 55/175 (31%), Positives = 99/175 (56%), Gaps = 16/175 (9%) Query: 19 KVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMVN-LQVKGKPVHLHIWDTAGQDD 77 K++L+GD G GKT +L F+D AF ++ T+ + + ++++GK + L IWDTAGQ+ Sbjct: 13 KLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQIWDTAGQER 72 Query: 78 YDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVN-HFCKKVPIIVVGCKTDLCKD 136 + + +Y A ++L +D+T+ SF+NI ++W ++ H + V +++G K D+ D Sbjct: 73 FHTITTSYYRGAMGIMLVYDITNGKSFENI-SKWLRNIDEHANEDVERMLLGNKCDM-DD 130 Query: 137 KSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNVHAVFQEAAEVAL 191 K +V K +G+++AR G + + E SA+ + N+ F AE L Sbjct: 131 KRVVPK-----------GKGEQIAREHG-IRFFETSAKANINIEKAFLTLAEDIL 173 >6IF2-B nrPDB Length = 186 Score = 92.0 bits (227), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 57/184 (30%), Positives = 93/184 (50%), Gaps = 15/184 (8%) Query: 19 KVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMV-NLQVKGKPVHLHIWDTAGQDD 77 K++++GD G GK+SLL+ FAD F SY T+ + + +++ G+ V L IWDTAG + Sbjct: 16 KLLIIGDSGVGKSSLLLRFADNTFSGSYITTIGVDFKIRTVEINGEKVKLQIWDTAGLER 75 Query: 78 YDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVNHFCKKVPIIVVGCKTDLCKDK 137 + + +Y +++ +DVTS SF N+ RW E+N C V I+VG K D + K Sbjct: 76 FRTITSTYYRGTHGVIVVYDVTSAESFVNV-KRWLHEINQNCDDVCRILVGNKNDDPERK 134 Query: 138 SLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNVHAVFQEAAEVALSSRGRN 197 V + A +G + E SA+ + NV +F E+ L ++ N Sbjct: 135 ------------VVETEDAYKFAGQMG-IQLFETSAKENVNVEEMFNCITELVLRAKKDN 181 Query: 198 FWRR 201 ++ Sbjct: 182 LAKQ 185 >5SZJ-A nrPDB Length = 202 Score = 92.0 bits (227), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 55/175 (31%), Positives = 99/175 (56%), Gaps = 16/175 (9%) Query: 19 KVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMVN-LQVKGKPVHLHIWDTAGQDD 77 K++L+GD G GKT +L F+D AF ++ T+ + + ++++GK + L IWDTAGQ+ Sbjct: 13 KLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQIWDTAGQER 72 Query: 78 YDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVN-HFCKKVPIIVVGCKTDLCKD 136 + + +Y A ++L +D+T+ SF+NI ++W ++ H + V +++G K D+ D Sbjct: 73 FHTITTSYYRGAMGIMLVYDITNGKSFENI-SKWLRNIDEHANEDVERMLLGNKCDM-DD 130 Query: 137 KSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNVHAVFQEAAEVAL 191 K +V K +G+++AR G + + E SA+ + N+ F AE L Sbjct: 131 KRVVPK-----------GKGEQIAREHG-IRFFETSAKANINIEKAFLTLAEDIL 173 >2G6B-A nrPDB Length = 180 Score = 91.7 bits (226), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 61/175 (34%), Positives = 93/175 (53%), Gaps = 17/175 (9%) Query: 17 SVKVVLVGDGGCGKTSLLMVFADGAF-PESYTPTVFERYMVN-LQVKGKPVHLHIWDTAG 74 + KV+LVGD G GKT LL+ F DGAF ++ TV + L V G V L +WDTAG Sbjct: 10 AFKVMLVGDSGVGKTCLLVRFKDGAFLAGTFISTVGIDFRNKVLDVDGVKVKLQMWDTAG 69 Query: 75 QDDYDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVNHFCK-KVPIIVVGCKTDL 133 Q+ + + +Y DA LLL +DVT+ SFDNI W E++ + + V ++++G K D Sbjct: 70 QERFRSVTHAYYRDAHALLLLYDVTNKASFDNI-QAWLTEIHEYAQHDVALMLLGNKVDS 128 Query: 134 CKDKSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNVHAVFQEAAE 188 ++ V G+++A+ G + ++E SA+ NV F A+ Sbjct: 129 AHER------------VVKREDGEKLAKEYG-LPFMETSAKTGLNVDLAFTAIAK 170 >4M8N-E nrPDB Length = 199 Score = 90.5 bits (223), Expect = 4e-19, Method: Compositional matrix adjust. Identities = 54/172 (31%), Positives = 91/172 (52%), Gaps = 13/172 (7%) Query: 13 PGVRSVKVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMVNLQVKGKPVHLHIWDT 72 P +R K+V++G GG GK++L + F G F E Y PT+ + Y ++V + L I DT Sbjct: 2 PHMREYKLVVLGSGGVGKSALTVQFVQGIFVEKYDPTIEDSYRKQVEVDAQQCMLEILDT 61 Query: 73 AGQDDYDRLRPLFYPDASVLLLCFDVTSPNSFDNIFN-RWYPEVNHFCKKVPIIVVGCKT 131 AG + + +R L+ + L + +T+ ++F+++ + R VP+I+VG K Sbjct: 62 AGTEQFTAMRDLYMKNGQGFALVYSITAQSTFNDLQDLREQILRVKDTDDVPMILVGNKC 121 Query: 132 DLCKDKSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNVHAVF 183 DL +D+ +V K +GQ +AR A+LE SA+ NV+ +F Sbjct: 122 DL-EDERVVGK-----------EQGQNLARQWNNCAFLESSAKSKINVNEIF 161 >1YZU-A nrPDB Length = 170 Score = 90.1 bits (222), Expect = 5e-19, Method: Compositional matrix adjust. Identities = 54/169 (31%), Positives = 91/169 (53%), Gaps = 16/169 (9%) Query: 17 SVKVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMVN-LQVKGKPVHLHIWDTAGQ 75 S KVVL+G+G GKTSL++ + + F + + T+ ++ L + GK V+L IWDTAGQ Sbjct: 6 SFKVVLLGEGCVGKTSLVLRYCENKFNDKHITTLQASFLTKKLNIGGKRVNLAIWDTAGQ 65 Query: 76 DDYDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVNHFC-KKVPIIVVGCKTDLC 134 + + L P++Y D++ +L +D+T +SF + N W E+ ++ + +VG K DL Sbjct: 66 ERFHALGPIYYRDSNGAILVYDITDEDSFQKVKN-WVKELRKMLGNEICLCIVGNKIDLE 124 Query: 135 KDKSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNVHAVF 183 K++ V+ + A SVGA Y SA+ + + +F Sbjct: 125 KER------------HVSIQEAESYAESVGAKHY-HTSAKQNKGIEELF 160 >2IL1-A nrPDB Length = 192 Score = 89.7 bits (221), Expect = 8e-19, Method: Compositional matrix adjust. Identities = 47/173 (27%), Positives = 93/173 (53%), Gaps = 15/173 (8%) Query: 13 PGVRSVKVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMVN-LQVKGKPVHLHIWD 71 P ++V+++G G GKTSL+ F D F E+ TV + + ++++GK + L IWD Sbjct: 22 PADFKLQVIIIGSRGVGKTSLMERFTDDTFCEACKSTVGVDFKIKTVELRGKKIRLQIWD 81 Query: 72 TAGQDDYDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVNHFCKK-VPIIVVGCK 130 TAGQ+ ++ + +Y A ++L +D+T +FD++ +W ++ + + +++VG K Sbjct: 82 TAGQERFNSITSAYYRSAKGIILVYDITKKETFDDL-PKWMKMIDKYASEDAELLLVGNK 140 Query: 131 TDLCKDKSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNVHAVF 183 D D+ +T +G++ A+ + + + E SA+ + NV +F Sbjct: 141 LDCETDRE------------ITRQQGEKFAQQITGMRFCEASAKDNFNVDEIF 181 >5LDD-C nrPDB Length = 207 Score = 88.6 bits (218), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 56/180 (31%), Positives = 87/180 (48%), Gaps = 18/180 (10%) Query: 18 VKVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMV-NLQVKGKPVHLHIWDTAGQD 76 +KV+++GD G GKTSL+ + + F SY T+ ++ + V + V + +WDTAGQ+ Sbjct: 11 LKVIILGDSGVGKTSLMNQYVNKKFSASYKATIGADFLTREVMVDDRQVTMQLWDTAGQE 70 Query: 77 DYDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVNHFC-----KKVPIIVVGCKT 131 + L FY A +L FDV + SFD + + W E + P +V+G K Sbjct: 71 RFQSLGVAFYRGADCCVLVFDVNNAKSFDAL-DSWRDEFLIQASPRDPENFPFVVLGIKI 129 Query: 132 DLCKDKSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNVHAVFQEAAEVAL 191 D+ + K + ++ R Q +S G + Y E SA+ NV FQ A AL Sbjct: 130 DVEESKRV-----------ISTKRAQTFCQSKGGIPYFETSAKEAINVEEAFQVIARNAL 178 >2OCB-A nrPDB Length = 180 Score = 88.2 bits (217), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 62/181 (34%), Positives = 87/181 (48%), Gaps = 20/181 (11%) Query: 18 VKVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYM-VNLQVKGKPVHLHIWDTAGQD 76 +KV+L+GDGG GK+SL+ + F T+ ++ +L+V G+ V L IWDTAGQ+ Sbjct: 8 LKVILLGDGGVGKSSLMNRYVTNKFDSQAFHTIGVEFLNRDLEVDGRFVTLQIWDTAGQE 67 Query: 77 DYDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVNHFC-----KKVPIIVVGCKT 131 + LR FY A LL F V SF+N+ N W E ++ + P +V+G K Sbjct: 68 RFKSLRTPFYRGADCCLLTFSVDDRQSFENLGN-WQKEFIYYADVKDPEHFPFVVLGNK- 125 Query: 132 DLCKDKSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNVHAVFQEAAEVAL 191 V+K R VT Q G YLE SA+ NV F+EA L Sbjct: 126 --------VDKEDRQ----VTTEEAQTWCMENGDYPYLETSAKDDTNVTVAFEEAVRQVL 173 Query: 192 S 192 + Sbjct: 174 A 174 >1WMS-A nrPDB Length = 177 Score = 88.2 bits (217), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 57/182 (31%), Positives = 85/182 (46%), Gaps = 20/182 (10%) Query: 19 KVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYM-VNLQVKGKPVHLHIWDTAGQDD 77 KV+L+GDGG GK+SL+ + F T+ ++ +L+V G V + IWDTAGQ+ Sbjct: 9 KVILLGDGGVGKSSLMNRYVTNKFDTQLFHTIGVEFLNKDLEVDGHFVTMQIWDTAGQER 68 Query: 78 YDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVNHFC-----KKVPIIVVGCKTD 132 + LR FY + LL F V SF N+ N W E ++ + P +++G K D Sbjct: 69 FRSLRTPFYRGSDCCLLTFSVDDSQSFQNLSN-WKKEFIYYADVKEPESFPFVILGNKID 127 Query: 133 LCKDKSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNVHAVFQEAAEVALS 192 + + V+ Q R G Y E SA+ NV A F+EA L+ Sbjct: 128 ISE-------------RQVSTEEAQAWCRDNGDYPYFETSAKDATNVAAAFEEAVRRVLA 174 Query: 193 SR 194 + Sbjct: 175 TE 176 >1X3S-A nrPDB Length = 195 Score = 87.4 bits (215), Expect = 4e-18, Method: Compositional matrix adjust. Identities = 58/191 (30%), Positives = 95/191 (49%), Gaps = 20/191 (10%) Query: 17 SVKVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMV-NLQVKGKPVHLHIWDTAGQ 75 ++K++++G+ G GK+SLL+ F D F T+ + V + V G L IWDTAGQ Sbjct: 15 TLKILIIGESGVGKSSLLLRFTDDTFDPELAATIGVDFKVKTISVDGNKAKLAIWDTAGQ 74 Query: 76 DDYDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVNHFCKKVPII--VVGCKTDL 133 + + L P +Y A ++L +DVT ++F + N W E+ +C + I+ +VG K D Sbjct: 75 ERFRTLTPSYYRGAQGVILVYDVTRRDTFVKLDN-WLNELETYCTRNDIVNMLVGNKID- 132 Query: 134 CKDKSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNVHAVFQEAAEVALSS 193 K+ V+ R GL+ H ++ ++E SA+ D V F+E E + + Sbjct: 133 -KENREVD--RNEGLKFARKH----------SMLFIEASAKTCDGVQCAFEELVEKIIQT 179 Query: 194 RGRNFWRRITQ 204 G W Q Sbjct: 180 PG--LWESENQ 188 >4QXA-A nrPDB Length = 208 Score = 87.0 bits (214), Expect = 5e-18, Method: Compositional matrix adjust. Identities = 58/185 (31%), Positives = 89/185 (48%), Gaps = 20/185 (10%) Query: 19 KVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYM-VNLQVKGKPVHLHIWDTAGQDD 77 K++L+GDGG GK+SL+ + F T+ ++ +L+V G V + IWDTAG + Sbjct: 10 KIILLGDGGVGKSSLMNRYVTNKFDSQLFHTIGVEFLNKDLEVDGHFVTMQIWDTAGLER 69 Query: 78 YDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVNHFC-----KKVPIIVVGCKTD 132 + LR FY + LL F V SF N+ N W E ++ + P +++G KTD Sbjct: 70 FRSLRTPFYRGSDCCLLTFSVDDSQSFQNLSN-WKKEFIYYADVKEPESFPFVILGNKTD 128 Query: 133 LCKDKSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNVHAVFQEAAEVALS 192 + K R+ V+ Q + G Y E SA+ NV A F+EA L+ Sbjct: 129 I--------KERQ-----VSTEEAQAWCKDNGDYPYFETSAKDSTNVAAAFEEAVRRILA 175 Query: 193 SRGRN 197 + R+ Sbjct: 176 TEDRS 180 >2N1B-A nrPDB Length = 261 Score = 86.7 bits (213), Expect = 6e-18, Method: Compositional matrix adjust. Identities = 56/185 (30%), Positives = 93/185 (50%), Gaps = 19/185 (10%) Query: 2 TAAQAAGEEAPPGVRSV--KVVLVGDGGCGKTSLLMVFADGAFPESYTPTV-FERYMVNL 58 ++ AAG A G V K+VLVGDGG GKT+ + G F + Y T+ E + + Sbjct: 34 SSRSAAGTMAAQGEPQVQFKLVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVF 93 Query: 59 QVKGKPVHLHIWDTAGQDDYDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVNHF 118 P+ ++WDTAGQ+ + LR +Y A ++ FDVTS ++ N+ N W+ ++ Sbjct: 94 HTNRGPIKFNVWDTAGQEKFGGLRDGYYIQAQCAIIMFDVTSRVTYKNVPN-WHRDLVRV 152 Query: 119 CKKVPIIVVGCKTDLCKDKSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDN 178 C+ +PI++ G K D+ K R+ + + +HR + + Y + SA+ + N Sbjct: 153 CENIPIVLCGNKVDI--------KDRKVKAKSIVFHRKKNL-------QYYDISAKSNYN 197 Query: 179 VHAVF 183 F Sbjct: 198 FEKPF 202 >2A5J-A nrPDB Length = 191 Score = 86.7 bits (213), Expect = 7e-18, Method: Compositional matrix adjust. Identities = 59/198 (29%), Positives = 95/198 (47%), Gaps = 26/198 (13%) Query: 12 PPGVRSVKVVLVGDGGCGKTSLLMVFADGAFPESYTPTV---FERYMVNLQVKGKPVHLH 68 P G K +++GD G GK+ LL+ F D F + T+ F MVN + GK + L Sbjct: 16 PRGSYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVN--IDGKQIKLQ 73 Query: 69 IWDTAGQDDYDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVNHFCKKVPIIVVG 128 IWDTAGQ+ + + +Y A+ LL +D+T +F+++ + H + I+++G Sbjct: 74 IWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLTSWLEDARQHSSSNMVIMLIG 133 Query: 129 CKTDLCKDKSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNVHAVFQEAAE 188 K+DL + RR+ V G+ AR G + ++E SA+ NV F A Sbjct: 134 NKSDL--------ESRRD----VKREEGEAFAREHGLI-FMETSAKTACNVEEAFINTA- 179 Query: 189 VALSSRGRNFWRRITQGF 206 + +R+I QG Sbjct: 180 -------KEIYRKIQQGL 190 >2FFQ-A nrPDB Length = 171 Score = 85.5 bits (210), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 51/175 (29%), Positives = 92/175 (52%), Gaps = 16/175 (9%) Query: 19 KVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMV-NLQVKGKPVHLHIWDTAGQDD 77 K+V +G+ GKTSL+ F +F +Y T+ ++ + ++ + V L +WDTAGQ+ Sbjct: 4 KLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQER 63 Query: 78 YDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEV-NHFCKKVPIIVVGCKTDLCKD 136 + L P + D++V ++ +D+T+ NSF ++W +V V I++VG KTDL Sbjct: 64 FRSLIPSYIRDSTVAVVVYDITNLNSFQQT-SKWIDDVRTERGSDVIIMLVGNKTDLADK 122 Query: 137 KSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNVHAVFQEAAEVAL 191 + +T G++ A+ + +V ++E SA+ NV +F+ A L Sbjct: 123 R------------QITIEEGEQRAKEL-SVMFIETSAKTGYNVKQLFRRVASALL 164 >2KE5-A nrPDB Length = 174 Score = 85.5 bits (210), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 56/167 (33%), Positives = 81/167 (48%), Gaps = 15/167 (8%) Query: 19 KVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMVNLQVKGKPVHLHIWDTAGQDDY 78 KV++VG GG GK++L + F F E Y PT + Y + + G+ V + I DTAG +DY Sbjct: 5 KVIMVGSGGVGKSALTLQFMYDEFVEDYEPTKADSYRKKVVLDGEEVQIDILDTAGLEDY 64 Query: 79 DRLRPLFYPDASVLLLCFDVTSPNSFDNI--FNRWYPEVNHFCKKVPIIVVGCKTDLCKD 136 +R ++ LL F +T SF F V K+P++VVG K+DL + Sbjct: 65 AAIRDNYFRSGEGFLLVFSITEHESFTATAEFREQILRVKAEEDKIPLLVVGNKSDLEER 124 Query: 137 KSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNVHAVF 183 + + PV R + A G V Y+E SA+ NV VF Sbjct: 125 RQV----------PVEEARSK--AEEWG-VQYVETSAKTRANVDKVF 158 >4DXA-A nrPDB Length = 169 Score = 85.1 bits (209), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 52/170 (30%), Positives = 89/170 (52%), Gaps = 13/170 (7%) Query: 15 VRSVKVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMVNLQVKGKPVHLHIWDTAG 74 +R K+V++G G GK++L + F G F E Y PT+ + Y ++V + L I DTAG Sbjct: 3 MREYKLVVLGSVGVGKSALTVQFVQGIFVEKYDPTIEDSYRKQVEVDAQQCMLEILDTAG 62 Query: 75 QDDYDRLRPLFYPDASVLLLCFDVTSPNSFDNIFN-RWYPEVNHFCKKVPIIVVGCKTDL 133 + + +R L+ + L + +T+ ++F+++ + R VP+I+VG K DL Sbjct: 63 TEQFTAMRDLYMKNGQGFALVYSITAQSTFNDLQDLREQILRVKDTDDVPMILVGNKCDL 122 Query: 134 CKDKSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNVHAVF 183 +D+ +V K +GQ +AR A+LE SA+ NV+ +F Sbjct: 123 -EDERVVGK-----------EQGQNLARQWNNCAFLESSAKSKINVNEIF 160 >4RKF-A nrPDB Length = 190 Score = 85.1 bits (209), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 51/173 (29%), Positives = 94/173 (54%), Gaps = 16/173 (9%) Query: 19 KVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMVNLQVK-GKPVHLHIWDTAGQDD 77 K++++G+ GKTS L +AD +F ++ TV + V + K V L IWDTAG + Sbjct: 25 KLLIIGNSSVGKTSFLFRYADDSFTSAFVSTVGIDFKVKTVFRHDKRVKLQIWDTAGLER 84 Query: 78 YDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVNHFC-KKVPIIVVGCKTDLCKD 136 Y + +Y A +L +DVT+ +SF+++ W ++ + +I+VG K D+ +D Sbjct: 85 YRTITTAYYRGAMGFILMYDVTNEDSFNSV-QDWVTQIKTYSWDNAQVILVGNKCDM-ED 142 Query: 137 KSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNVHAVFQEAAEV 189 + + +++ RG+++A +G V + E SA+ + NV AVF+ ++ Sbjct: 143 QRV-----------ISFERGRQLADQLG-VEFFETSAKENVNVKAVFERLVDI 183 >5XOJ-A nrPDB Length = 182 Score = 84.7 bits (208), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 55/184 (29%), Positives = 93/184 (50%), Gaps = 22/184 (11%) Query: 1 MTAAQAAGEEAPPGVRSVKVVLVGDGGCGKTSLLMVFADGAFPESYTPTV-FERYMVNLQ 59 M+A A GE V + K+VLVGDGG GKT+ + G F + Y T+ E + ++ Sbjct: 1 MSAPAANGE-----VPTFKLVLVGDGGTGKTTFVKRHLTGEFEKKYIATIGVEVHPLSFY 55 Query: 60 VKGKPVHLHIWDTAGQDDYDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVNHFC 119 + +WDTAG + + LR +Y +A ++ FDVTS ++ N+ N W+ ++ C Sbjct: 56 TNFGEIKFDVWDTAGLEKFGGLRDGYYINAQCAIIMFDVTSRITYKNVPN-WHRDLVRVC 114 Query: 120 KKVPIIVVGCKTDLCKDKSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNV 179 + +PI++ G K D+ K R+ + +T+HR + + Y + SA+ + N Sbjct: 115 ENIPIVLCGNKVDV--------KERKVKAKTITFHRKKNL-------QYYDISAKSNYNF 159 Query: 180 HAVF 183 F Sbjct: 160 EKPF 163 >1D5C-A nrPDB Length = 162 Score = 84.7 bits (208), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 52/171 (30%), Positives = 87/171 (50%), Gaps = 16/171 (9%) Query: 19 KVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMVN-LQVKGKPVHLHIWDTAGQDD 77 K+V +G+ GKTS++ F F +Y T+ ++ L + PV L +WDTAGQ+ Sbjct: 3 KLVFLGEQAVGKTSIITRFMYDTFDNNYQSTIGIDFLSKTLYLDEGPVRLQLWDTAGQER 62 Query: 78 YDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEV-NHFCKKVPIIVVGCKTDLCKD 136 + L P + D++ ++ +D+T+ SF+N +W ++ N K V I +VG KTDL Sbjct: 63 FRSLIPSYIRDSAAAIVVYDITNRQSFENT-TKWIQDILNERGKDVIIALVGNKTDL--- 118 Query: 137 KSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNVHAVFQEAA 187 L VTY G + A+ + + E SA+ N+ +F++ A Sbjct: 119 ---------GDLRKVTYEEGMQKAQEYNTM-FHETSAKAGHNIKVLFKKTA 159 >3OES-A nrPDB Length = 201 Score = 84.7 bits (208), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 63/186 (33%), Positives = 91/186 (48%), Gaps = 20/186 (10%) Query: 10 EAPPGVRSVKVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMVNLQVKGKPVHLHI 69 + P VR KVV++G GKTSL F +G F E Y PTV Y + + HLH+ Sbjct: 17 QGMPLVRYRKVVILGYRCVGKTSLAHQFVEGEFSEGYDPTVENTYSKIVTLGKDEFHLHL 76 Query: 70 WDTAGQDDYDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVN--HFCKKVPIIVV 127 DTAGQD+Y L F +L + VTS +SF + Y +++ H +VP+++V Sbjct: 77 VDTAGQDEYSILPYSFIIGVHGYVLVYSVTSLHSF-QVIESLYQKLHEGHGKTRVPVVLV 135 Query: 128 GCKTDLCKDKSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNVHAVF---- 183 G K DL ++ V G+++A S GA ++E SAR + +F Sbjct: 136 GNKADLSPERE------------VQAVEGKKLAESWGA-TFMESSARENQLTQGIFTKVI 182 Query: 184 QEAAEV 189 QE A V Sbjct: 183 QEIARV 188 >4FMC-F nrPDB Length = 117 Score = 84.7 bits (208), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 41/116 (35%), Positives = 71/116 (61%), Gaps = 3/116 (2%) Query: 20 VVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMV-NLQVKGKPVHLHIWDTAGQDDY 78 ++L+GD G GK+ LL+ FAD + ESY T+ + + +++ GK + L IWDTAGQ+ + Sbjct: 1 LLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQERF 60 Query: 79 DRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVNHFC-KKVPIIVVGCKTDL 133 + +Y A +++ +DVT SF+N+ +W E++ + + V ++VG K DL Sbjct: 61 RTITSSYYRGAHGIIVVYDVTDQESFNNV-KQWLQEIDRYASENVNKLLVGNKCDL 115 >4PHF-A nrPDB Length = 184 Score = 84.3 bits (207), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 57/182 (31%), Positives = 92/182 (50%), Gaps = 21/182 (11%) Query: 18 VKVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMVN-LQVKGKPV-HLHIWDTAGQ 75 +KV+++GD G GKTSL+ + + + Y T+ ++ + V G V + +WDTAGQ Sbjct: 11 LKVIILGDSGVGKTSLMHRYVNDKYSCQYKATIGADFLTKEVTVDGDKVATMQVWDTAGQ 70 Query: 76 DDYDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPE------VNHFCKKVPIIVVGC 129 + + L FY A +L +DVT+ +SF+NI W E VN + P +++G Sbjct: 71 ERFQSLGVAFYRGADCCVLVYDVTNASSFENI-KSWRDEFLVHANVNS-PETFPFVILGN 128 Query: 130 KTDLCKDKSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNVHAVFQEAAEV 189 K D + K +V++ QE+A+S+G + SA+ NV F+E A Sbjct: 129 KIDAEESKKIVSE-----------KSAQELAKSLGDIPLFLTSAKNAINVDTAFEEIARS 177 Query: 190 AL 191 AL Sbjct: 178 AL 179 >2F7S-A nrPDB Length = 217 Score = 84.3 bits (207), Expect = 4e-17, Method: Compositional matrix adjust. Identities = 59/187 (31%), Positives = 91/187 (48%), Gaps = 27/187 (14%) Query: 18 VKVVLVGDGGCGKTSLLMVFADGAFPESYTPTVF-----ERYMVNLQV------KGKPVH 66 +K++ +GD G GKT+ L + D F + TV +R + N Q K VH Sbjct: 26 IKLLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYNAQGPNGSSGKAFKVH 85 Query: 67 LHIWDTAGQDDYDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEV--NHFCKKVPI 124 L +WDTAGQ+ + L F+ DA LL FD+TS SF N+ N W ++ N +C+ I Sbjct: 86 LQLWDTAGQERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVRN-WMSQLQANAYCENPDI 144 Query: 125 IVVGCKTDLCKDKSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNVHAVFQ 184 +++G K DL D+ VN+ + +E+A G + Y E SA NV + Sbjct: 145 VLIGNKADL-PDQREVNE-----------RQARELADKYG-IPYFETSAATGQNVEKAVE 191 Query: 185 EAAEVAL 191 ++ + Sbjct: 192 TLLDLIM 198 >4G01-B nrPDB Length = 181 Score = 84.0 bits (206), Expect = 4e-17, Method: Compositional matrix adjust. Identities = 58/184 (31%), Positives = 88/184 (47%), Gaps = 18/184 (9%) Query: 8 GEEAPPGVRSV--KVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMVN-LQVKGKP 64 G A G +S+ K+VL+GD G GK+SL++ F F E T+ + L V Sbjct: 1 GSMAAAGNKSINAKLVLLGDVGAGKSSLVLRFVKDQFVEFQESTIGAAFFSQTLAVNDAT 60 Query: 65 VHLHIWDTAGQDDYDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVN-HFCKKVP 123 V IWDTAGQ+ Y L P++Y A+ ++ FDVT+ SF+ +W E+ + Sbjct: 61 VKFEIWDTAGQERYHSLAPMYYRGAAAAIIVFDVTNQASFERA-KKWVQELQAQGNPNMV 119 Query: 124 IIVVGCKTDLCKDKSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNVHAVF 183 + + G K+DL + VT Q A+ G + ++E SA+ NV +F Sbjct: 120 MALAGNKSDLLDAR------------KVTAEDAQTYAQENG-LFFMETSAKTATNVKEIF 166 Query: 184 QEAA 187 E A Sbjct: 167 YEIA 170 >3WYF-A nrPDB Length = 219 Score = 84.0 bits (206), Expect = 4e-17, Method: Compositional matrix adjust. Identities = 55/184 (29%), Positives = 93/184 (50%), Gaps = 22/184 (11%) Query: 1 MTAAQAAGEEAPPGVRSVKVVLVGDGGCGKTSLLMVFADGAFPESYTPTV-FERYMVNLQ 59 M+A A GE V + K+VLVGDGG GKT+ + G F + Y T+ E + ++ Sbjct: 1 MSAPAANGE-----VPTFKLVLVGDGGTGKTTFVKRHLTGEFEKKYIATIGVEVHPLSFY 55 Query: 60 VKGKPVHLHIWDTAGQDDYDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVNHFC 119 + +WDTAG + + LR +Y +A ++ FDVTS ++ N+ N W+ ++ C Sbjct: 56 TNFGEIKFDVWDTAGLEKFGGLRDGYYINAQCAIIMFDVTSRITYKNVPN-WHRDLVRVC 114 Query: 120 KKVPIIVVGCKTDLCKDKSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNV 179 + +PI++ G K D+ K R+ + +T+HR + + Y + SA+ + N Sbjct: 115 ENIPIVLCGNKVDV--------KERKVKAKTITFHRKKNL-------QYYDISAKSNYNF 159 Query: 180 HAVF 183 F Sbjct: 160 EKPF 163 >5CLL-A nrPDB Length = 191 Score = 84.0 bits (206), Expect = 5e-17, Method: Compositional matrix adjust. Identities = 50/166 (30%), Positives = 85/166 (51%), Gaps = 17/166 (10%) Query: 19 KVVLVGDGGCGKTSLLMVFADGAFPESYTPTV-FERYMVNLQVKGKPVHLHIWDTAGQDD 77 K+VLVGDGG GKT+ + G F + Y T+ E + + P+ ++WDTAGQ+ Sbjct: 12 KLVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGPIKFNVWDTAGQEK 71 Query: 78 YDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVNHFCKKVPIIVVGCKTDLCKDK 137 + LR +Y A ++ FDVTS ++ N+ N W+ ++ C+ +PI++ G K D+ Sbjct: 72 FGGLRDGYYIQAQCAIIMFDVTSRVTYKNVPN-WHRDLVRVCENIPIVLCGNKVDI---- 126 Query: 138 SLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNVHAVF 183 K R+ + + +HR + + Y + SA+ + N F Sbjct: 127 ----KDRKVKAKSIVFHRKKNL-------QYYDISAKSNYNFEKPF 161 >5UWI-A nrPDB Length = 237 Score = 83.6 bits (205), Expect = 6e-17, Method: Compositional matrix adjust. Identities = 50/166 (30%), Positives = 85/166 (51%), Gaps = 17/166 (10%) Query: 19 KVVLVGDGGCGKTSLLMVFADGAFPESYTPTV-FERYMVNLQVKGKPVHLHIWDTAGQDD 77 K+VLVGDGG GKT+ + G F + Y T+ E + + P+ ++WDTAGQ+ Sbjct: 33 KLVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGPIKFNVWDTAGQEK 92 Query: 78 YDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVNHFCKKVPIIVVGCKTDLCKDK 137 + LR +Y A ++ FDVTS ++ N+ N W+ ++ C+ +PI++ G K D+ Sbjct: 93 FGGLRDGYYIQAQCAIIMFDVTSRVTYKNVPN-WHRDLVRVCENIPIVLCGNKVDI---- 147 Query: 138 SLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNVHAVF 183 K R+ + + +HR + + Y + SA+ + N F Sbjct: 148 ----KDRKVKAKSIVFHRKKNL-------QYYDISAKSNYNFEKPF 182 >2HUP-A nrPDB Length = 201 Score = 83.2 bits (204), Expect = 8e-17, Method: Compositional matrix adjust. Identities = 52/171 (30%), Positives = 84/171 (49%), Gaps = 15/171 (8%) Query: 19 KVVLVGDGGCGKTSLLMVFADGAFPESYTPTV-FERYMVNLQVKGKPVHLHIWDTAGQDD 77 K+VLVGD GKT ++ F GAF E T+ + M L+++GK V L IWDTAGQ+ Sbjct: 31 KLVLVGDASVGKTCVVQRFKTGAFSERQGSTIGVDFTMKTLEIQGKRVKLQIWDTAGQER 90 Query: 78 YDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVNHFC-KKVPIIVVGCKTDLCKD 136 + + +Y A+ +L +D+T +SF ++ W +V + + +++G K+DL + Sbjct: 91 FRTITQSYYRSANGAILAYDITKRSSFLSV-PHWIEDVRKYAGSNIVQLLIGNKSDLSE- 148 Query: 137 KSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNVHAVFQEAA 187 L V+ Q +A + +E SA+ NV F A Sbjct: 149 -----------LREVSLAEAQSLAEHYDILCAIETSAKDSSNVEEAFLRVA 188 >3T5G-A nrPDB Length = 181 Score = 82.4 bits (202), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 54/173 (31%), Positives = 89/173 (51%), Gaps = 14/173 (8%) Query: 13 PGVRSVKVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMVNLQVKGKPVHLHIWDT 72 P +S K+ ++G GK+SL + F +G F +SY PT+ + + V G+ HL + DT Sbjct: 2 PQSKSRKIAILGYRSVGKSSLTIQFVEGQFVDSYDPTIENTFTKLITVNGQEYHLQLVDT 61 Query: 73 AGQDDYDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVNHFCK-KVPIIVVGCKT 131 AGQD+Y + D + +L + VTS SF+ I ++ K ++PI++VG K Sbjct: 62 AGQDEYSIFPQTYSIDINGYILVYSVTSIKSFEVIKVIHGKLLDMVGKVQIPIMLVGNKK 121 Query: 132 DLCKDKSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNVHAVFQ 184 DL ++ ++Y G+ +A S A A+LE SA+ + VF+ Sbjct: 122 DLHMER------------VISYEEGKALAESWNA-AFLESSAKENQTAVDVFR 161 >5FBL-B nrPDB Length = 221 Score = 82.4 bits (202), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 56/168 (33%), Positives = 83/168 (49%), Gaps = 16/168 (9%) Query: 19 KVVLVGDGGCGKTSLLMVFADGAFP-ESYTPTVFERYMVNLQVKGKPVHLHIWDTAGQDD 77 KVVL+GD G GK++LL F F ES + E ++QV GK + IWDTAGQ+ Sbjct: 18 KVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQER 77 Query: 78 YDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEV-NHFCKKVPIIVVGCKTDLCKD 136 Y + +Y A LL +D+ +++N+ RW E+ +H + I++VG K+DL Sbjct: 78 YRAITSAYYRGAVGALLVYDIAKHLTYENV-ERWLKELRDHADSNIVIMLVGNKSDL--- 133 Query: 137 KSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNVHAVFQ 184 L V + A G ++++E SA NV A FQ Sbjct: 134 ---------RHLRAVPTDEARAFAEKNG-LSFIETSALDSTNVEAAFQ 171 >4KLZ-A nrPDB Length = 173 Score = 82.4 bits (202), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 49/177 (27%), Positives = 90/177 (50%), Gaps = 22/177 (12%) Query: 16 RSVKVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMVNLQVKGKPVHLHIWDTAGQ 75 R K+V++G GG GK+++ M F FPE + PT+ + Y + +++ +P +L I DTAGQ Sbjct: 4 REYKLVMLGAGGVGKSAMTMQFISHRFPEDHDPTIEDAYKIRIRIDDEPANLDILDTAGQ 63 Query: 76 DDYDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVNHFCKK---VPIIVVGCKTD 132 ++ +R + ++C+ +T SF + R + ++ + ++ P+++VG K+D Sbjct: 64 AEFTAMRDQYMRAGEGFIICYSITDRRSFHEV--REFKQLIYRVRRTDDTPVVLVGNKSD 121 Query: 133 LCKDKSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSAR----LHDNVHAVFQE 185 L + L VT G +AR + + E SA + D HA+ +E Sbjct: 122 LKQ------------LRQVTKEEGLALAREF-SCPFFETSAAYRYYIDDVFHALVRE 165 >2GIL-A nrPDB Length = 162 Score = 82.0 bits (201), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 50/171 (29%), Positives = 88/171 (51%), Gaps = 16/171 (9%) Query: 19 KVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMV-NLQVKGKPVHLHIWDTAGQDD 77 K+V +G+ GKTSL+ F +F +Y T+ ++ + ++ + V L +WDTAGQ+ Sbjct: 3 KLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQER 62 Query: 78 YDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEV-NHFCKKVPIIVVGCKTDLCKD 136 + L P + D++V ++ +D+T+ NSF +W +V V I++VG KTDL Sbjct: 63 FRSLIPSYIRDSTVAVVVYDITNVNSFQQT-TKWIDDVRTERGSDVIIMLVGNKTDLADK 121 Query: 137 KSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNVHAVFQEAA 187 + V+ G+ A+ + V ++E SA+ NV +F+ A Sbjct: 122 R------------QVSIEEGERKAKELN-VMFIETSAKAGYNVKQLFRRVA 159 >2FG5-A nrPDB Length = 192 Score = 81.6 bits (200), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 50/173 (28%), Positives = 88/173 (50%), Gaps = 16/173 (9%) Query: 14 GVRSVKVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMVNLQVKGKPVH-LHIWDT 72 +R +KV L+GD G GK+S++ F F + +PT+ +M G +H IWDT Sbjct: 20 AIRELKVCLLGDTGVGKSSIVCRFVQDHFDHNISPTIGASFMTKTVPCGNELHKFLIWDT 79 Query: 73 AGQDDYDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVN-HFCKKVPIIVVGCKT 131 AGQ+ + L P++Y ++ ++ +D+T +SF + +W E+ H + + + + G K Sbjct: 80 AGQERFHSLAPMYYRGSAAAVIVYDITKQDSFYTL-KKWVKELKEHGPENIVMAIAGNKC 138 Query: 132 DLCKDKSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNVHAVFQ 184 DL + + V +E A S+GA+ +E SA+ N+ +FQ Sbjct: 139 DL------------SDIREVPLKDAKEYAESIGAIV-VETSAKNAINIEELFQ 178 >2F9L-A nrPDB Length = 199 Score = 81.6 bits (200), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 45/117 (38%), Positives = 67/117 (57%), Gaps = 3/117 (2%) Query: 19 KVVLVGDGGCGKTSLLMVFADGAFP-ESYTPTVFERYMVNLQVKGKPVHLHIWDTAGQDD 77 KVVL+GD G GK++LL F F ES + E ++QV GK + IWDTAGQ+ Sbjct: 7 KVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQER 66 Query: 78 YDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEV-NHFCKKVPIIVVGCKTDL 133 Y R+ +Y A LL +D+ +++N+ RW E+ +H + I++VG K+DL Sbjct: 67 YRRITSAYYRGAVGALLVYDIAKHLTYENV-ERWLKELRDHADSNIVIMLVGNKSDL 122 >2IEY-A nrPDB Length = 195 Score = 81.6 bits (200), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 57/176 (32%), Positives = 84/176 (47%), Gaps = 27/176 (15%) Query: 18 VKVVLVGDGGCGKTSLLMVFADGAFPESYTPTV---FERYMVNLQVKGK--------PVH 66 +K++ +GD G GKT+ L + D F + TV F V +G VH Sbjct: 12 IKLLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYDTQGADGASGKAFKVH 71 Query: 67 LHIWDTAGQDDYDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEV--NHFCKKVPI 124 L +WDTAG + + L F+ DA LL FD+TS SF N+ N W ++ N +C+ I Sbjct: 72 LQLWDTAGLERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVRN-WMSQLQANAYCENPDI 130 Query: 125 IVVGCKTDLCKDKSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNVH 180 +++G K DL D+ VN+ + +E+A G + Y E SA NV Sbjct: 131 VLIGNKADL-PDQREVNE-----------RQARELAEKYG-IPYFETSAATGQNVE 173 >2P5S-A nrPDB Length = 199 Score = 81.6 bits (200), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 60/177 (33%), Positives = 92/177 (51%), Gaps = 11/177 (6%) Query: 16 RSVKVVLVGDGGCGKTSLLMVFADGAFPESYTPTV-FERYMVNLQVKGKPVHLHIWDTAG 74 ++ K+VL GD GK+S LM F E+ + T+ + M L V G+ L +WDTAG Sbjct: 27 KAYKIVLAGDAAVGKSSFLMRLCKNEFRENISATLGVDFQMKTLIVDGERTVLQLWDTAG 86 Query: 75 QDDYDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVNHFC-KKVPIIVVGCKTDL 133 Q+ + + ++ A +LL +DVT SF NI W + + VPI++VG K D+ Sbjct: 87 QERFRSIAKSYFRKADGVLLLYDVTCEKSFLNI-REWVDMIEDAAHETVPIMLVGNKADI 145 Query: 134 CKDKSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDN-VHAVFQEAAEV 189 +D + G + V H G+++A + GA+ + E SA+ N V AV A EV Sbjct: 146 -RDTAAT-----EGQKCVPGHFGEKLAMTYGAL-FCETSAKDGSNIVEAVLHLAREV 195 >5YOZ-A nrPDB Length = 177 Score = 81.6 bits (200), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 51/173 (29%), Positives = 83/173 (47%), Gaps = 15/173 (8%) Query: 17 SVKVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMV-NLQVKGKPVHLHIWDTAGQ 75 S K+V++G+ G GK+S+ + F F + T+ ++ + + G+ + IWDTAG Sbjct: 15 SAKIVMLGESGAGKSSIALRFTRNEFLANQETTIGAAFLSKTVMIDGRALKYEIWDTAGL 74 Query: 76 DDYDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVNHFCKKVPIIV-VGCKTDLC 134 + + L P++Y AS L+ +D+T+ S W E+ IIV VG K DL Sbjct: 75 ERFRSLAPIYYRGASGALVVYDITNSESLKKA-QTWIKELRANADPSLIIVLVGNKKDL- 132 Query: 135 KDKSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNVHAVFQEAA 187 L V++ GQ +A A+ E SA+ ++NV VF + A Sbjct: 133 -----------GSLRQVSFEDGQRLAAEEQLAAFYEASAKDNNNVEQVFLDLA 174 >3CUE-F nrPDB Length = 206 Score = 80.9 bits (198), Expect = 4e-16, Method: Compositional matrix adjust. Identities = 54/188 (28%), Positives = 90/188 (47%), Gaps = 16/188 (8%) Query: 19 KVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMV-NLQVKGKPVHLHIWDTAGQDD 77 K++L+G+ G GK+ LL+ F+D + Y T+ + + +++ GK V L IWDTAGQ+ Sbjct: 10 KLLLIGNSGVGKSCLLLRFSDDTYTNDYISTIGVDFKIKTVELDGKTVKLQIWDTAGQER 69 Query: 78 YDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVNHFCKKVPI-IVVGCKTDLCKD 136 + + +Y + +++ +DVT SF+ + W E++ + + ++VG K DL KD Sbjct: 70 FRTITSSYYRGSHGIIIVYDVTDQESFNGV-KMWLQEIDRYATSTVLKLLVGNKCDL-KD 127 Query: 137 KSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNVHAVFQEAAEVALSSRGR 196 K +V Y +E A + +LE SA NV F A S + Sbjct: 128 KRVVE-----------YDVAKEFA-DANKMPFLETSALDSTNVEDAFLTMARQIKESMSQ 175 Query: 197 NFWRRITQ 204 TQ Sbjct: 176 QNLNETTQ 183 >2IEZ-A nrPDB Length = 220 Score = 80.9 bits (198), Expect = 4e-16, Method: Compositional matrix adjust. Identities = 57/176 (32%), Positives = 84/176 (47%), Gaps = 27/176 (15%) Query: 18 VKVVLVGDGGCGKTSLLMVFADGAFPESYTPTV---FERYMVNLQVKGK--------PVH 66 +K++ +GD G GKT+ L + D F + TV F V +G VH Sbjct: 12 IKLLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYDTQGADGASGKAFKVH 71 Query: 67 LHIWDTAGQDDYDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEV--NHFCKKVPI 124 L +WDTAG + + L F+ DA LL FD+TS SF N+ N W ++ N +C+ I Sbjct: 72 LQLWDTAGLERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVRN-WMSQLQANAYCENPDI 130 Query: 125 IVVGCKTDLCKDKSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNVH 180 +++G K DL D+ VN+ + +E+A G + Y E SA NV Sbjct: 131 VLIGNKADL-PDQREVNE-----------RQARELAEKYG-IPYFETSAATGQNVE 173 >4UJ4-A nrPDB Length = 185 Score = 80.9 bits (198), Expect = 4e-16, Method: Compositional matrix adjust. Identities = 55/168 (32%), Positives = 82/168 (48%), Gaps = 16/168 (9%) Query: 19 KVVLVGDGGCGKTSLLMVFADGAFP-ESYTPTVFERYMVNLQVKGKPVHLHIWDTAGQDD 77 KVVL+GD G GK++LL F F ES + E ++QV GK + IWDTAG + Sbjct: 12 KVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGLER 71 Query: 78 YDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEV-NHFCKKVPIIVVGCKTDLCKD 136 Y + +Y A LL +D+ +++N+ RW E+ +H + I++VG K+DL Sbjct: 72 YRAITSAYYRGAVGALLVYDIAKHLTYENV-ERWLKELRDHADSNIVIMLVGNKSDL--- 127 Query: 137 KSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNVHAVFQ 184 L V + A G ++++E SA NV A FQ Sbjct: 128 ---------RHLRAVPTDEARAFAEKNG-LSFIETSALDSTNVEAAFQ 165 >5LEF-A nrPDB Length = 191 Score = 80.1 bits (196), Expect = 6e-16, Method: Compositional matrix adjust. Identities = 50/175 (28%), Positives = 89/175 (50%), Gaps = 16/175 (9%) Query: 15 VRSVKVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMVN-LQVKGKPVHLHIWDTA 73 +R K+V +G+ GKTSL+ F +F +Y T+ ++ + ++ + V L +WDTA Sbjct: 7 LRKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTA 66 Query: 74 GQDDYDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEV-NHFCKKVPIIVVGCKTD 132 G + + L P + D++V ++ +D+T+ NSF +W +V V I++VG KTD Sbjct: 67 GLERFRSLIPSYIRDSTVAVVVYDITNVNSFQQT-TKWIDDVRTERGSDVIIMLVGNKTD 125 Query: 133 LCKDKSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNVHAVFQEAA 187 L + V+ G+ A+ + V ++E SA+ NV +F+ A Sbjct: 126 LADKR------------QVSIEEGERKAKELN-VMFIETSAKAGYNVKQLFRRVA 167 >3BFK-A nrPDB Length = 181 Score = 80.1 bits (196), Expect = 6e-16, Method: Compositional matrix adjust. Identities = 54/170 (31%), Positives = 87/170 (51%), Gaps = 17/170 (10%) Query: 19 KVVLVGDGGCGKTSLLMVFADGAFP-ESYTPTVFERYMVNLQVKG-KPVHLHIWDTAGQD 76 K+VL+GD G GK++LL F F ES + E ++Q+K K + IWDTAGQ+ Sbjct: 9 KIVLIGDSGVGKSNLLSRFTRDEFNLESKSTIGVEFATKSIQLKNNKIIKAQIWDTAGQE 68 Query: 77 DYDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEV-NHFCKKVPIIVVGCKTDLCK 135 Y + +Y A LL +D+T NSF+NI +W E+ ++ + I++VG K+DL Sbjct: 69 RYRAITSAYYRGAVGALLVYDITKKNSFENI-EKWLKELRDNADSNIVILLVGNKSDLKH 127 Query: 136 DKSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNVHAVFQE 185 + + N + Y + +++ A++E SA NV F + Sbjct: 128 LRVI------NDNDATQYAKKEKL-------AFIETSALEATNVELAFHQ 164 >1YZN-A nrPDB Length = 185 Score = 80.1 bits (196), Expect = 7e-16, Method: Compositional matrix adjust. Identities = 51/171 (29%), Positives = 87/171 (50%), Gaps = 16/171 (9%) Query: 19 KVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMV-NLQVKGKPVHLHIWDTAGQDD 77 K++L+G+ G GK+ LL+ F+D + Y T+ + + +++ GK V L IWDTAGQ+ Sbjct: 23 KLLLIGNSGVGKSCLLLRFSDDTYTNDYISTIGVDFKIKTVELDGKTVKLQIWDTAGQER 82 Query: 78 YDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVNHFCKKVPI-IVVGCKTDLCKD 136 + + +Y + +++ +DVT SF+ + W E++ + + ++VG K DL KD Sbjct: 83 FRTITSSYYRGSHGIIIVYDVTDQESFNGV-KMWLQEIDRYATSTVLKLLVGNKCDL-KD 140 Query: 137 KSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNVHAVFQEAA 187 K +V Y +E A + + +LE SA NV F A Sbjct: 141 KRVVE-----------YDVAKEFADA-NKMPFLETSALDSTNVEDAFLTMA 179 >4KU4-A nrPDB Length = 206 Score = 79.7 bits (195), Expect = 8e-16, Method: Compositional matrix adjust. Identities = 58/193 (30%), Positives = 88/193 (45%), Gaps = 36/193 (18%) Query: 13 PGVRSV--KVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMVNLQVKGKPVHLHIW 70 PG + K+ ++G+GG GKTSL + F E+Y PT+ + Y + G P HL I Sbjct: 8 PGAGKITDKIAMLGEGGVGKTSLTVNLTKHVFSETYDPTLEDSYRRQCVIDGIPSHLEIL 67 Query: 71 DTAGQDDYDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVNHFCKKVP------- 123 DTAGQ++Y LR + + ++ FDVT +SF+ R + EV +K+ Sbjct: 68 DTAGQEEYGALREQWIRQNELFVIVFDVTRRSSFEAA-ERLFEEVIQTKRKLDETRRHPG 126 Query: 124 -------------IIVVGCKTDLCKDKSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLE 170 +++VG K DL RR V G +A+ +G ++E Sbjct: 127 DRHPDDLPFAPSLVVLVGNKCDL--------DTRRE----VGTLEGSSLAKKLGC-GFVE 173 Query: 171 CSARLHDNVHAVF 183 SA+L NV F Sbjct: 174 TSAKLGTNVEEAF 186 >1Z0A-A nrPDB Length = 174 Score = 79.3 bits (194), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 49/171 (28%), Positives = 84/171 (49%), Gaps = 14/171 (8%) Query: 19 KVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMVNL-QVKGKPVHLHIWDTAGQDD 77 K +++GD G GK+ LL+ F D F + T+ + + + GK + L IWDTAGQ+ Sbjct: 12 KYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIWDTAGQES 71 Query: 78 YDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVNHFCKKVPIIVVGCKTDLCKDK 137 + + +Y A+ LL +D+T ++F+++ H + I+++G K+DL Sbjct: 72 FRSITRSYYRGAAGALLVYDITRRDTFNHLTTWLEDARQHSNSNMVIMLIGNKSDL---- 127 Query: 138 SLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNVHAVFQEAAE 188 + RR V G+ AR G + ++E SA+ NV F A+ Sbjct: 128 ----ESRR----EVKKEEGEAFAREHGLI-FMETSAKTASNVEEAFINTAK 169 >5CM8-B nrPDB Length = 203 Score = 79.0 bits (193), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 55/167 (32%), Positives = 80/167 (47%), Gaps = 16/167 (9%) Query: 19 KVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMVNLQVKGKPVHLHIWDTAGQDDY 78 KV++VG GG GK++L + F F E Y PT + Y + + G+ V + I DTAGQ+DY Sbjct: 15 KVIMVGSGGVGKSALTLQFMYDEFVEDYEPTKADSYRKKVVLDGEEVQIDILDTAGQEDY 74 Query: 79 DRLRPLFYPDASVLLLCFDVTSPNSFDNI--FNRWYPEVNHFCKKVPIIVVGCKTDLCKD 136 +R ++ L F +T SF F V + + +P ++VG K DL Sbjct: 75 AAIRDNYFRSGEGFLCVFSITDDESFQATQEFREQILRVKN-DESIPFLLVGNKCDL--- 130 Query: 137 KSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNVHAVF 183 N R+ L R Q+ AV Y+E SA+ +NV VF Sbjct: 131 ----NDKRKVPLSECQL-RAQQW-----AVPYVETSAKTRENVDKVF 167 >3RAB-A nrPDB Length = 169 Score = 78.6 bits (192), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 48/173 (27%), Positives = 86/173 (49%), Gaps = 16/173 (9%) Query: 19 KVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMVNLQVKG-KPVHLHIWDTAGQDD 77 K++++G+ GKTS L +AD +F ++ TV + V + K + L IWDTAGQ+ Sbjct: 7 KILIIGNSSVGKTSFLFRYADDSFTPAFVSTVGIDFKVKTIYRNDKRIKLQIWDTAGQER 66 Query: 78 YDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVNHFC-KKVPIIVVGCKTDLCKD 136 Y + +Y A +L +D+T+ SF N W ++ + +++VG K D+ + Sbjct: 67 YRTITTAYYRGAMGFILMYDITNEESF-NAVQDWSTQIKTYSWDNAQVLLVGNKCDMEDE 125 Query: 137 KSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNVHAVFQEAAEV 189 + V+ RG+++A +G + E SA+ + NV F+ +V Sbjct: 126 R------------VVSSERGRQLADHLG-FEFFEASAKDNINVKQTFERLVDV 165 >3BC1-A nrPDB Length = 195 Score = 77.8 bits (190), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 58/178 (32%), Positives = 85/178 (47%), Gaps = 26/178 (14%) Query: 18 VKVVLVGDGGCGKTSLLMVFADGAFPESYTPTV---FERYMVNLQV--------KGKPVH 66 +K + +GD G GKTS+L + DG F + TV F V + +G+ +H Sbjct: 12 IKFLALGDSGVGKTSVLYQYTDGKFNSKFITTVGIDFREKRVVYRANGPDGAVGRGQRIH 71 Query: 67 LHIWDTAGQDDYDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVN-HFCKKVPII 125 L +WDTAG + + L F+ DA LL FD+T+ SF N+ N W ++ H + P I Sbjct: 72 LQLWDTAGLERFRSLTTAFFRDAMGFLLLFDLTNEQSFLNVRN-WISQLQMHAYSENPDI 130 Query: 126 VVGCKTDLCKDKSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNV-HAV 182 V LC +KS + R V +E+A G + Y E SA N+ HA+ Sbjct: 131 V------LCGNKSDLEDQR-----AVKEEEARELAEKYG-IPYFETSAANGTNISHAI 176 >1Z22-A nrPDB Length = 168 Score = 77.8 bits (190), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 42/130 (32%), Positives = 69/130 (53%), Gaps = 8/130 (6%) Query: 17 SVKVVLVGDGGCGKTSLLMVFADGAFPESYTPTV----FERYMVNLQVKGKPVHLHIWDT 72 ++K+V+VG+G GK+S++ + G F + Y T+ ER +QV + V L +WDT Sbjct: 5 AIKMVVVGNGAVGKSSMIQRYCKGIFTKDYKKTIGVDFLER---QIQVNDEDVRLMLWDT 61 Query: 73 AGQDDYDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVNHFCKKVPIIVVGCKTD 132 AGQ+++D + +Y A +L F T SF+ I + W +V +P +V K D Sbjct: 62 AGQEEFDAITKAYYRGAQACVLVFSTTDRESFEAI-SSWREKVVAEVGDIPTALVQNKID 120 Query: 133 LCKDKSLVNK 142 L D + N+ Sbjct: 121 LLDDSCIKNE 130 >1YVD-A nrPDB Length = 169 Score = 76.3 bits (186), Expect = 8e-15, Method: Compositional matrix adjust. Identities = 46/174 (26%), Positives = 90/174 (51%), Gaps = 16/174 (9%) Query: 14 GVRSVKVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMV-NLQVKGKPVHLHIWDT 72 +R +KV L+GD G GK+S++ F + +F + PT+ +M +Q + + IWDT Sbjct: 2 SLRELKVCLLGDTGVGKSSIVWRFVEDSFDPNINPTIGASFMTKTVQYQNELHKFLIWDT 61 Query: 73 AGQDDYDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEV-NHFCKKVPIIVVGCKT 131 AGQ+ + L P++Y ++ ++ +D+T +F + N W E+ H + + + G K Sbjct: 62 AGQERFRALAPMYYRGSAAAIIVYDITKEETFSTLKN-WVRELRQHGPPSIVVAIAGNKC 120 Query: 132 DLCKDKSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNVHAVFQE 185 DL + ++ + ++ A S+ A+ ++E SA+ N++ +F E Sbjct: 121 DLTDVREVMER------------DAKDYADSIHAI-FVETSAKNAININELFIE 161 >6IYB-A nrPDB Length = 199 Score = 76.3 bits (186), Expect = 8e-15, Method: Compositional matrix adjust. Identities = 55/180 (30%), Positives = 82/180 (45%), Gaps = 21/180 (11%) Query: 18 VKVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMVN-LQVKGKPVHLHIWDTAGQD 76 +KV+++GD G GKTSL+ + + F Y T+ ++ + V + V + IWDTAG + Sbjct: 14 LKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGLE 73 Query: 77 DYDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEV-----NHFCKKVPIIVVGCKT 131 + + FY A +L FDVT+PN+F + + W E + P +V+G K Sbjct: 74 RF-QSGVAFYRGADCCVLVFDVTAPNTFKTL-DSWRDEFLIQASPRDPENFPFVVLGNKI 131 Query: 132 DLCKDKSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNVHAVFQEAAEVAL 191 DL + V R Q S + Y E SA+ NV FQ A AL Sbjct: 132 DLENRQ-------------VATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIARNAL 178 >1Z0F-A nrPDB Length = 179 Score = 75.9 bits (185), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 48/172 (27%), Positives = 86/172 (50%), Gaps = 16/172 (9%) Query: 19 KVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMVNL-QVKGKPVHLHIWDTAGQDD 77 K +++GD G GK+ LL F + F T+ + + +V G+ + L IWDTAGQ+ Sbjct: 17 KYIIIGDMGVGKSCLLHQFTEKKFMADCPHTIGVEFGTRIIEVSGQKIKLQIWDTAGQER 76 Query: 78 YDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVNHFCK-KVPIIVVGCKTDLCKD 136 + + +Y A+ L+ +D+T ++++++ + W + + II++G K DL Sbjct: 77 FRAVTRSYYRGAAGALMVYDITRRSTYNHL-SSWLTDARNLTNPNTVIILIGNKADLEAQ 135 Query: 137 KSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNVHAVFQEAAE 188 + VTY ++ A G + +LE SA+ +NV F EAA+ Sbjct: 136 RD------------VTYEEAKQFAEENG-LLFLEASAKTGENVEDAFLEAAK 174 >4RKE-A nrPDB Length = 176 Score = 75.9 bits (185), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 51/174 (29%), Positives = 83/174 (47%), Gaps = 20/174 (11%) Query: 19 KVVLVGDGGCGKTSLLMVFADGAFPESYTPTV---FERYMVNLQVKGKPVHLHIWDTAGQ 75 K +++GD G GK+ LL+ F D F + T+ F M+ + GK + L IWDTAG Sbjct: 12 KYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMIT--IDGKQIKLQIWDTAGL 69 Query: 76 DDYDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEV-NHFCKKVPIIVVGCKTDLC 134 + + + +Y A+ LL +D+T +F+++ W + H + I+++G K+DL Sbjct: 70 EAFRSITRSYYRGAAGALLVYDITRRETFNHL-TTWLEDARQHSNSNMVIMLIGNKSDL- 127 Query: 135 KDKSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNVHAVFQEAAE 188 + V G+ AR G V ++E SAR NV F A+ Sbjct: 128 -----------DSRREVKKEEGEAFAREHGLV-FMETSARTAANVEEAFINTAK 169 >1TU4-A nrPDB Length = 171 Score = 75.5 bits (184), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 48/172 (27%), Positives = 81/172 (47%), Gaps = 16/172 (9%) Query: 19 KVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMVN-LQVKGKPVHLHIWDTAGQDD 77 K+VL+G+ GK+SL++ F G F E T+ ++ + + V IWDTAGQ+ Sbjct: 9 KLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQER 68 Query: 78 YDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVNHFCK-KVPIIVVGCKTDLCKD 136 Y L P++Y A ++ +D+T+ SF N W E+ + I + G K DL Sbjct: 69 YHSLAPMYYRGAQAAIVVYDITNEESFARAKN-WVKELQRQASPNIVIALSGNKADLANK 127 Query: 137 KSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNVHAVFQEAAE 188 ++ V + Q A ++ ++E SA+ NV+ +F A+ Sbjct: 128 RA------------VDFQEAQSYADD-NSLLFMETSAKTSMNVNEIFMAIAK 166 >3CPJ-B nrPDB Length = 223 Score = 75.1 bits (183), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 48/169 (28%), Positives = 79/169 (46%), Gaps = 16/169 (9%) Query: 19 KVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMV-NLQVKGKPVHLHIWDTAGQDD 77 K+VL+GD G GK++LL F F T+ + L+++GK + IWDTAGQ+ Sbjct: 15 KIVLIGDSGVGKSNLLSRFTKNEFNMDSKSTIGVEFATRTLEIEGKRIKAQIWDTAGQER 74 Query: 78 YDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVNHFC-KKVPIIVVGCKTDLCKD 136 Y + +Y A L+ +D++ +S++N N W E+ V + ++G K+DL Sbjct: 75 YRAITSAYYRGAVGALIVYDISKSSSYENC-NHWLSELRENADDNVAVGLIGNKSDLAH- 132 Query: 137 KSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNVHAVFQE 185 L V + A+ + + E SA +NV F+E Sbjct: 133 -----------LRAVPTEESKTFAQE-NQLLFTETSALNSENVDKAFEE 169 >1ZBD-A nrPDB Length = 203 Score = 74.7 bits (182), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 47/173 (27%), Positives = 85/173 (49%), Gaps = 16/173 (9%) Query: 19 KVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMVNLQVKG-KPVHLHIWDTAGQDD 77 K++++G+ GKTS L +AD +F ++ TV + V + K + L IWDTAG + Sbjct: 10 KILIIGNSSVGKTSFLFRYADDSFTPAFVSTVGIDFKVKTIYRNDKRIKLQIWDTAGLER 69 Query: 78 YDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVNHFC-KKVPIIVVGCKTDLCKD 136 Y + +Y A +L +D+T+ SF N W ++ + +++VG K D+ + Sbjct: 70 YRTITTAYYRGAMGFILMYDITNEESF-NAVQDWSTQIKTYSWDNAQVLLVGNKCDMEDE 128 Query: 137 KSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNVHAVFQEAAEV 189 + V+ RG+++A +G + E SA+ + NV F+ +V Sbjct: 129 R------------VVSSERGRQLADHLG-FEFFEASAKDNINVKQTFERLVDV 168 >1ZC4-A nrPDB Length = 175 Score = 74.3 bits (181), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 51/167 (30%), Positives = 76/167 (45%), Gaps = 16/167 (9%) Query: 19 KVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMVNLQVKGKPVHLHIWDTAGQDDY 78 KV++VG GG GK++L + F F E Y PT + Y + + G+ V + I DTAG +DY Sbjct: 8 KVIMVGSGGVGKSALTLQFMYDEFVEDYEPTKADSYRKKVVLDGEEVQIDILDTAGLEDY 67 Query: 79 DRLRPLFYPDASVLLLCFDVTSPNSFDNI--FNRWYPEVNHFCKKVPIIVVGCKTDLCKD 136 +R ++ L F +T SF F V + VP ++VG K+DL Sbjct: 68 AAIRDNYFRSGEGFLCVFSITEMESFAATADFREQILRVKE-DENVPFLLVGNKSDLEDK 126 Query: 137 KSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNVHAVF 183 + + + +N E V Y+E SA+ NV VF Sbjct: 127 RQVSVEEAKNRAEQWN-------------VNYVETSAKTRANVDKVF 160 >3DZ8-A nrPDB Length = 191 Score = 74.3 bits (181), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 49/172 (28%), Positives = 84/172 (48%), Gaps = 24/172 (13%) Query: 19 KVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMVNLQVKG-----KPVHLHIWDTA 73 K++++G+ GKTS L +AD F ++ TV ++ +VK K V L IWDTA Sbjct: 25 KLLIIGNSSVGKTSFLFRYADDTFTPAFVSTV----GIDFKVKTVYRHEKRVKLQIWDTA 80 Query: 74 GQDDYDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVNHFC-KKVPIIVVGCKTD 132 GQ+ Y + +Y A +L +D+T+ SF N W ++ + +I+VG K D Sbjct: 81 GQERYRTITTAYYRGAMGFILMYDITNEESF-NAVQDWATQIKTYSWDNAQVILVGNKCD 139 Query: 133 LCKDKSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNVHAVFQ 184 + +++ V +GQ +A +G + E SA+ + +V F+ Sbjct: 140 MEEER------------VVPTEKGQLLAEQLG-FDFFEASAKENISVRQAFE 178 >5UB8-A nrPDB Length = 222 Score = 73.9 bits (180), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 42/117 (35%), Positives = 64/117 (54%), Gaps = 3/117 (2%) Query: 19 KVVLVGDGGCGKTSLLMVFADGAFP-ESYTPTVFERYMVNLQVKGKPVHLHIWDTAGQDD 77 K+VL+GD G GK++LL F F ES + E L++ GK V IWDTAGQ+ Sbjct: 17 KIVLIGDSGVGKSNLLSRFTRDEFNLESRSTIGVEFATRTLEIDGKRVKAQIWDTAGQER 76 Query: 78 YDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEV-NHFCKKVPIIVVGCKTDL 133 Y + +Y A L+ +D+ S++++ +RW E+ H + I +VG K+DL Sbjct: 77 YRAITSAYYRGAVGALIVYDIAKTESYESV-SRWLKELKEHADANIIIELVGNKSDL 132 >5XR6-A nrPDB Length = 194 Score = 73.9 bits (180), Expect = 5e-14, Method: Compositional matrix adjust. Identities = 44/117 (37%), Positives = 63/117 (53%), Gaps = 3/117 (2%) Query: 19 KVVLVGDGGCGKTSLLMVFADGAFP-ESYTPTVFERYMVNLQVKGKPVHLHIWDTAGQDD 77 K+VL+GD G GK++LL F F ES + E +V+GK V IWDTAGQ+ Sbjct: 27 KLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATKTTKVEGKVVKAQIWDTAGQER 86 Query: 78 YDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEV-NHFCKKVPIIVVGCKTDL 133 Y + +Y A LL +DVT +F+N RW E+ H + ++++G K DL Sbjct: 87 YRAITSAYYRGAVGALLIYDVTRHATFENA-ARWLRELRGHTDPNIVVMLIGNKCDL 142 >2GF9-A nrPDB Length = 189 Score = 73.9 bits (180), Expect = 5e-14, Method: Compositional matrix adjust. Identities = 50/173 (28%), Positives = 83/173 (47%), Gaps = 16/173 (9%) Query: 19 KVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMVNLQVK-GKPVHLHIWDTAGQDD 77 K++L+G+ GKTS L +AD +F ++ TV + V + K + L IWDTAGQ+ Sbjct: 24 KLLLIGNSSVGKTSFLFRYADDSFTPAFVSTVGIDFKVKTVYRHDKRIKLQIWDTAGQER 83 Query: 78 YDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVNHFC-KKVPIIVVGCKTDLCKD 136 Y + +Y A LL +D+ + SF + W ++ + +I+VG K DL + Sbjct: 84 YRTITTAYYRGAMGFLLMYDIANQESFAAV-QDWATQIKTYSWDNAQVILVGNKCDLEDE 142 Query: 137 KSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNVHAVFQEAAEV 189 + V G+ +A +G + E SA+ + NV VF+ +V Sbjct: 143 R------------VVPAEDGRRLADDLG-FEFFEASAKENINVKQVFERLVDV 182 >2ERY-A nrPDB Length = 172 Score = 73.6 bits (179), Expect = 6e-14, Method: Compositional matrix adjust. Identities = 49/162 (30%), Positives = 73/162 (45%), Gaps = 16/162 (9%) Query: 30 KTSLLMVFADGAFPESYTPTVFERYMVNLQVKGKPVHLHIWDTAGQDDYDRLRPLFYPDA 89 K++L + F F Y PT+ + Y + + L I DTAGQ+++ +R + Sbjct: 18 KSALTIQFIQSYFVTDYDPTIEDSYTKQCVIDDRAARLDILDTAGQEEFGAMREQYMRTG 77 Query: 90 SVLLLCFDVTSPNSFDNI--FNRWYPEVNHFCKKVPIIVVGCKTDLCKDKSLVNKLRRNG 147 LL F VT SF+ I F R V + P+I++G K DL + Sbjct: 78 EGFLLVFSVTDRGSFEEIYKFQRQILRVKD-RDEFPMILIGNKADLDHQRQ--------- 127 Query: 148 LEPVTYHRGQEMARSVGAVAYLECSARLHDNVHAVFQEAAEV 189 VT GQ++AR + V Y+E SA++ NV F E V Sbjct: 128 ---VTQEEGQQLARQL-KVTYMEASAKIRMNVDQAFHELVRV 165 >2BMD-A nrPDB Length = 186 Score = 72.8 bits (177), Expect = 9e-14, Method: Compositional matrix adjust. Identities = 52/178 (29%), Positives = 85/178 (47%), Gaps = 20/178 (11%) Query: 19 KVVLVGDGGCGKTSLLMVFADGAFPESYTPTV---FERYMVNLQVKGKPVHLHIWDTAGQ 75 K +++G+ G GK+ LL F + F + T+ F ++N V GK V L IWDTAGQ Sbjct: 12 KFLVIGNAGTGKSCLLHQFIEKKFKDDSNHTIGVEFGSKIIN--VGGKYVKLQIWDTAGQ 69 Query: 76 DDYDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVNHFC-KKVPIIVVGCKTDLC 134 + + + +Y A+ LL +D+TS +++ + N W + + + II+ G K DL Sbjct: 70 ERFRSVTRSYYRGAAGALLVYDITSRETYNALTN-WLTDARMLASQNIVIILCGNKKDLD 128 Query: 135 KDKSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNVHAVFQEAAEVALS 192 D+ VT+ A+ + +LE SA +NV F + A L+ Sbjct: 129 ADR------------EVTFLEASRFAQE-NELMFLETSALTGENVEEAFVQCARKILN 173 >2ERX-A nrPDB Length = 172 Score = 72.8 bits (177), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 48/169 (28%), Positives = 77/169 (45%), Gaps = 15/169 (8%) Query: 19 KVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMVNLQVKGKPVHLHIWDTAGQDDY 78 +V + G GG GK+SL++ F G F ESY PTV + Y + L I DT G + Sbjct: 5 RVAVFGAGGVGKSSLVLRFVKGTFRESYIPTVEDTYRQVISCDKSICTLQITDTTGSHQF 64 Query: 79 DRLRPLFYPDASVLLLCFDVTSPNSFDNI--FNRWYPEVNHFCKKVPIIVVGCKTDLCKD 136 ++ L +L + +TS S + + E+ + +PI++VG K D Sbjct: 65 PAMQRLSISKGHAFILVYSITSRQSLEELKPIYEQICEIKGDVESIPIMLVGNKCDESPS 124 Query: 137 KSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNVHAVFQE 185 + V + +AR+ A++E SA+L+ NV +FQE Sbjct: 125 RE------------VQSSEAEALART-WKCAFMETSAKLNHNVKELFQE 160 >4DJT-A nrPDB Length = 218 Score = 72.8 bits (177), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 53/176 (30%), Positives = 80/176 (45%), Gaps = 17/176 (9%) Query: 17 SVKVVLVGDGGCGKTSLLMVFADGAFPESYTPTV--FERYMVNLQVKGKPVHLHIWDTAG 74 + K+ L+GDGG GKT+ + DG F ++Y TV + L +G + ++WDTAG Sbjct: 11 TYKICLIGDGGVGKTTYINRVLDGRFEKNYNATVGAVNHPVTFLDDQGNVIKFNVWDTAG 70 Query: 75 QDDYDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVNHFC-KKVPIIVVGCKTDL 133 Q+ L+ ++Y AS +L FDVTS + N+ RW E + PI+V K D+ Sbjct: 71 QEKKAVLKDVYYIGASGAILFFDVTSRITCQNL-ARWVKEFQAVVGNEAPIVVCANKIDI 129 Query: 134 CKDKSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNVHAVFQEAAEV 189 + + KL L+ Y Y E SA+ N F A + Sbjct: 130 KNRQKISKKLVMEVLKGKNYE-------------YFEISAKTAHNFGLPFLHLARI 172 >4KYI-B nrPDB Length = 170 Score = 72.4 bits (176), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 46/172 (26%), Positives = 81/172 (47%), Gaps = 16/172 (9%) Query: 19 KVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMVN-LQVKGKPVHLHIWDTAGQDD 77 K+VL+G+ GK+SL++ F G F E T+ ++ + + V IWDTAG + Sbjct: 11 KLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDTTVKFEIWDTAGLER 70 Query: 78 YDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVNHFCK-KVPIIVVGCKTDLCKD 136 Y L P++Y A ++ +D+T+ ++F N W E+ + I + G K DL Sbjct: 71 YHSLAPMYYRGAQAAIVVYDITNTDTFARAKN-WVKELQRQASPNIVIALAGNKADLASK 129 Query: 137 KSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNVHAVFQEAAE 188 ++ V + Q A ++ ++E SA+ NV+ +F A+ Sbjct: 130 RA------------VEFQEAQAYADD-NSLLFMETSAKTAMNVNEIFMAIAK 168 >2HEI-A nrPDB Length = 179 Score = 72.0 bits (175), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 46/167 (27%), Positives = 78/167 (46%), Gaps = 16/167 (9%) Query: 19 KVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMV-NLQVKGKPVHLHIWDTAGQDD 77 K+VL+G+ GK+SL++ F G F E T+ ++ ++ + V IWDTAGQ+ Sbjct: 10 KLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQSVCLDDTTVKFEIWDTAGQER 69 Query: 78 YDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVNHFCK-KVPIIVVGCKTDLCKD 136 Y L P++Y A ++ +D+T+ +F W E+ + I + G K DL Sbjct: 70 YHSLAPMYYRGAQAAIVVYDITNQETFARA-KTWVKELQRQASPSIVIALAGNKADLANK 128 Query: 137 KSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNVHAVF 183 + V Y Q A ++ ++E SA+ NV+ +F Sbjct: 129 R------------MVEYEEAQAYADD-NSLLFMETSAKTAMNVNDLF 162 >6HUF-A nrPDB Length = 182 Score = 70.9 bits (172), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 43/123 (34%), Positives = 66/123 (53%), Gaps = 4/123 (3%) Query: 18 VKVVLVGDGGCGKTSLLMVFADGAFPESYTPTV-FERYMVNLQVKGKPVHLHIWDTAGQD 76 +K + +GD G GKTS+L + DG F + TV + + K + L +WDTAG + Sbjct: 10 IKFLALGDSGVGKTSVLYQYTDGKFNSKFITTVGIDFREKTIYRNDKRIKLQLWDTAGLE 69 Query: 77 DYDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEV-NHFCKKVPIIVV-GCKTDLC 134 + L F+ DA LL FD+T+ SF N+ N W ++ H + P IV+ G K+DL Sbjct: 70 RFRSLTTAFFRDAMGFLLLFDLTNEESFLNVRN-WISQLKTHAYSENPDIVLCGNKSDLE 128 Query: 135 KDK 137 ++ Sbjct: 129 DER 131 >3RWM-B nrPDB Length = 185 Score = 69.7 bits (169), Expect = 8e-13, Method: Compositional matrix adjust. Identities = 49/169 (28%), Positives = 77/169 (45%), Gaps = 16/169 (9%) Query: 19 KVVLVGDGGCGKTSLLMVFADGAFP-ESYTPTVFERYMVNLQVKGKPVHLHIWDTAGQDD 77 K+VL+GD G GK++LL F F ES + E ++V+ K + IWDTAG + Sbjct: 12 KIVLIGDSGVGKSNLLSRFTTDEFNIESKSTIGVEFATRTIEVENKKIKAQIWDTAGLER 71 Query: 78 YDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVNHFC-KKVPIIVVGCKTDLCKD 136 Y + +Y A L+ +D++ +S++N N W E+ V + ++G K+DL Sbjct: 72 YRAITSAYYRGAVGALIVYDISKSSSYENC-NHWLTELRENADDNVAVGLIGNKSDLAH- 129 Query: 137 KSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNVHAVFQE 185 L V + A + + E SA DNV F+E Sbjct: 130 -----------LRAVPTDEAKNFAME-NQMLFTETSALNSDNVDKAFRE 166 >2O52-A nrPDB Length = 200 Score = 68.6 bits (166), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 51/178 (28%), Positives = 81/178 (45%), Gaps = 20/178 (11%) Query: 19 KVVLVGDGGCGKTSLLMVFADGAFPESYTPTV---FERYMVNLQVKGKPVHLHIWDTAGQ 75 K +++G G GK+ LL F + F + T+ F +VN V GK V L IWDTAGQ Sbjct: 27 KFLVIGSAGTGKSCLLHQFIENKFKQDSNHTIGVEFGSRVVN--VGGKTVKLQIWDTAGQ 84 Query: 76 DDYDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVNHFCK-KVPIIVVGCKTDLC 134 + + + +Y A+ LL +D+TS ++ N W + + +I+ G K DL Sbjct: 85 ERFRSVTRSYYRGAAGALLVYDITSRETY-NSLAAWLTDARTLASPNIVVILCGNKKDLD 143 Query: 135 KDKSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNVHAVFQEAAEVALS 192 ++ VT+ A+ + +LE SA +NV F + A L+ Sbjct: 144 PER------------EVTFLEASRFAQE-NELMFLETSALTGENVEEAFLKCARTILN 188 >3TSO-A nrPDB Length = 178 Score = 67.8 bits (164), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 48/168 (28%), Positives = 75/168 (44%), Gaps = 16/168 (9%) Query: 19 KVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMVNLQVKGKP-VHLHIWDTAGQDD 77 KVVL+G+ G GKT+LL F F T+ + + G V IWDTAG + Sbjct: 12 KVVLIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVMLGTAAVKAQIWDTAGLER 71 Query: 78 YDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEV-NHFCKKVPIIVVGCKTDLCKD 136 Y + +Y A LL FD+T ++ + RW E+ +H + +++VG K+DL + Sbjct: 72 YRAITSAYYRGAVGALLVFDLTKHQTY-AVVERWLKELYDHAEATIVVMLVGNKSDLSQA 130 Query: 137 KSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNVHAVFQ 184 + + + R M + +LE SA NV F+ Sbjct: 131 REVPTEEAR-------------MFAENNGLLFLETSALDSTNVELAFE 165 >3E5H-A nrPDB Length = 178 Score = 65.5 bits (158), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 41/125 (32%), Positives = 68/125 (54%), Gaps = 7/125 (5%) Query: 15 VRSVKVVLVGDGGCGKTSLLMVFADGAFPESYTPTV-FERYMVNLQVKGK-PVHLHIWDT 72 +R +K+V++GDG GKTSL FA F + Y T+ + ++ + + G V L IWD Sbjct: 4 MRQLKIVVLGDGASGKTSLTTCFAQETFGKQYKQTIGLDFFLRRITLPGNLNVTLQIWDI 63 Query: 73 AGQDDYDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWY---PEVNHFCKKVPII-VVG 128 GQ ++ + A +LL +D+T+ SF+N+ WY +V+ + P++ +VG Sbjct: 64 GGQTIGGKMLDKYIYGAQGVLLVYDITNYQSFENL-EDWYTVVKKVSEESETQPLVALVG 122 Query: 129 CKTDL 133 K DL Sbjct: 123 NKIDL 127 >5XC3-A nrPDB Length = 176 Score = 64.7 bits (156), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 39/122 (31%), Positives = 67/122 (54%), Gaps = 6/122 (4%) Query: 19 KVVLVGDGGCGKTSLLMVFADGAFPESYTPTV---FERYMVNLQVKGKPVHLHIWDTAGQ 75 K++L+G G GK+S++ F + +PT+ F V + GK + L+IWDTAGQ Sbjct: 7 KIILIGSSGVGKSSIVHQFLFNRKISNVSPTIGAAFASKQV-IAKNGKTLKLNIWDTAGQ 65 Query: 76 DDYDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVNHFCKKV-PIIVVGCKTDLC 134 + + + ++Y ++ L+ FDVT SFD+++ W ++ C I+VV K D+ Sbjct: 66 ERFRSITKMYYTNSLGCLVVFDVTDRESFDDVY-YWINDLRINCHTTYYILVVANKIDID 124 Query: 135 KD 136 K+ Sbjct: 125 KN 126 >3RAP-R nrPDB Length = 167 Score = 61.2 bits (147), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 34/106 (32%), Positives = 55/106 (51%), Gaps = 3/106 (2%) Query: 30 KTSLLMVFADGAFPESYTPTVFERYMVNLQVKGKPVHLHIWDTAGQDDYDRLRPLFYPDA 89 K++L + F G F E Y PT+ + Y ++V P L I DTAG + + +R L+ + Sbjct: 16 KSALTVQFVTGTFIEKYDPTIEDFYRKEIEVDSSPSVLEILDTAGTEQFASMRDLYIKNG 75 Query: 90 SVLLLCFDVTSPNSFDNI--FNRWYPEVNHFCKKVPIIVVGCKTDL 133 +L + + + SF +I V + +KVP+I+VG K DL Sbjct: 76 QGFILVYSLVNQQSFQDIKPMRDQIIRVKRY-EKVPVILVGNKVDL 120 >1Z06-A nrPDB Length = 189 Score = 61.2 bits (147), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 40/134 (29%), Positives = 67/134 (50%), Gaps = 11/134 (8%) Query: 8 GEEAPPGVRS--VKVVLVGDGGCGKTSLLMVFADGAFPESYTPTV---FERYMVNLQVKG 62 G P G RS K++++GD GKT L F G FP+ T+ F V+ + G Sbjct: 9 GSLVPRGSRSRIFKIIVIGDSNVGKTCLTYRFCAGRFPDRTEATIGVDFRERAVD--IDG 66 Query: 63 KPVHLHIWDTAGQDDYDR-LRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVNH--FC 119 + + + +WDTAGQ+ + + + +Y + ++ +D+T+ SF ++ W E Sbjct: 67 ERIKIQLWDTAGQERFRKSMVQHYYRNVHAVVFVYDMTNMASFHSL-PAWIEECKQHLLA 125 Query: 120 KKVPIIVVGCKTDL 133 +P I+VG K DL Sbjct: 126 NDIPRILVGNKCDL 139 >2G77-B nrPDB Length = 198 Score = 60.8 bits (146), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 39/134 (29%), Positives = 67/134 (50%), Gaps = 9/134 (6%) Query: 6 AAGEEAPPGVRSVKVVLVGDGGCGKTSLLMVFADGAFPESYTPTV---FERYMVNLQVKG 62 A+G P R K++++GD GKT L F G FP+ T+ F V+ + G Sbjct: 18 ASGCLPPARSRIFKIIVIGDSNVGKTCLTYRFCAGRFPDRTEATIGVDFRERAVD--IDG 75 Query: 63 KPVHLHIWDTAGQDDYDR-LRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVNH--FC 119 + + + +WDTAGQ+ + + + +Y + ++ +D+T+ SF ++ W E Sbjct: 76 ERIKIQLWDTAGQERFRKSMVQHYYRNVHAVVFVYDMTNMASFHSL-PAWIEECKQHLLA 134 Query: 120 KKVPIIVVGCKTDL 133 +P I+VG K DL Sbjct: 135 NDIPRILVGNKCDL 148 >2FN4-A nrPDB Length = 181 Score = 60.8 bits (146), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 52/179 (29%), Positives = 83/179 (46%), Gaps = 22/179 (12%) Query: 12 PPGVRSVKVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMVNLQVKGKPVHLHIWD 71 PP + K+V+VG GG GK++L + F F Y PT+ + Y V G P L I D Sbjct: 4 PPPSETHKLVVVGGGGVGKSALTIQFIQSYFVSDYDPTIEDSYTKICSVDGIPARLDILD 63 Query: 72 TAGQDDYDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVNHFCKK--VPIIVVGC 129 TAGQ+++ +R + LL F + SF+ + + + ++ + P+++VG Sbjct: 64 TAGQEEFGAMREQYMRAGHGFLLVFAINDRQSFNEV-GKLFTQILRVKDRDDFPVVLVGN 122 Query: 130 KTDLCKDKSLVNKLRRNGLEPVTYHRGQEMARSVGA---VAYLECSARLHDNVHAVFQE 185 K DL + + + A + GA VAY E SA+L NV F++ Sbjct: 123 KADLESQRQV----------------PRSEASAFGASHHVAYFEASAKLRLNVDEAFEQ 165 >5WDQ-A nrPDB Length = 170 Score = 60.1 bits (144), Expect = 6e-10, Method: Compositional matrix adjust. Identities = 40/156 (25%), Positives = 71/156 (45%), Gaps = 17/156 (10%) Query: 30 KTSLLMVFADGAFPESYTPTVFERYMVNLQVKGKPVHLHIWDTAGQDDYDRLRPLFYPDA 89 K++L + F + Y PT+ + Y + + G+ L I DTAGQ++Y +R + Sbjct: 20 KSALTIQLIQNHFVDEYDPTIEDSYRKQVVIDGETCLLDILDTAGQEEYSAMRDQYMRTG 79 Query: 90 SVLLLCFDVTSPNSFDNIFNRWYPEVNHF--CKKVPIIVVGCKTDLCKDKSLVNKLRRNG 147 L F + + SF++I +++ ++ VP+++VG K D Sbjct: 80 EGFLCVFAINNTKSFEDI-HQYREQIKRVKDSDDVPMVLVGNKCDA-------------A 125 Query: 148 LEPVTYHRGQEMARSVGAVAYLECSARLHDNVHAVF 183 V + Q++ARS G + Y+E SA+ V F Sbjct: 126 ARTVESRQAQDLARSYG-IPYIETSAKTRQGVEDAF 160 >2GF0-A nrPDB Length = 199 Score = 57.8 bits (138), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 39/158 (24%), Positives = 70/158 (44%), Gaps = 16/158 (10%) Query: 30 KTSLLMVFADGAFPESYTPTVFERYMVNLQVKGKPVHLHIWDTAGQDDYDRLRPLFYPDA 89 K+SL++ F G F ++Y PT+ + Y + L I DT G + ++ L Sbjct: 21 KSSLVLRFVKGTFRDTYIPTIEDTYRQVISCDKSVCTLQITDTTGSHQFPAMQRLSISKG 80 Query: 90 SVLLLCFDVTSPNSFDNI--FNRWYPEVNHFCKKVPIIVVGCKTDLCKDKSLVNKLRRNG 147 +L F VTS S + + + ++ + +P+++VG K D + Sbjct: 81 HAFILVFSVTSKQSLEELGPIYKLIVQIKGSVEDIPVMLVGNKCDETQ------------ 128 Query: 148 LEPVTYHRGQEMARSVGAVAYLECSARLHDNVHAVFQE 185 V Q +A+ A++E SA+++ NV +FQE Sbjct: 129 -REVDTREAQAVAQE-WKCAFMETSAKMNYNVKELFQE 164 >5WDR-A nrPDB Length = 171 Score = 57.4 bits (137), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 43/156 (27%), Positives = 70/156 (44%), Gaps = 16/156 (10%) Query: 30 KTSLLMVFADGAFPESYTPTVFERYMVNLQVKGKPVHLHIWDTAGQDDYDRLRPLFYPDA 89 K++L + F Y PT+ + Y ++ + + L I DTAGQ+DY +R + Sbjct: 20 KSALTIQLIQQHFVTEYDPTIEDSYRKHVSIDDEACLLDILDTAGQEDYSAMRDQYMRTG 79 Query: 90 SVLLLCFDVTSPNSFDNI--FNRWYPEVNHFCKKVPIIVVGCKTDLCKDKSLVNKLRRNG 147 L + + S S D I F V +VP+I+VG K DL + + Sbjct: 80 EGFLCVYSIDSQQSLDEIHSFREQILRVKD-QDEVPMILVGNKCDLEEHR---------- 128 Query: 148 LEPVTYHRGQEMARSVGAVAYLECSARLHDNVHAVF 183 V+ GQ +A+S ++ ++E SA+ NV F Sbjct: 129 --EVSTEAGQAVAKSY-SIPFMETSAKKRINVEEAF 161 >2ATV-A nrPDB Length = 196 Score = 57.4 bits (137), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 49/173 (28%), Positives = 81/173 (46%), Gaps = 20/173 (11%) Query: 17 SVKVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMVNLQVKGKPVHLHIWDTAGQD 76 VK+ + G G GK++L++ F F Y PT+ Y + + V + I DTAGQ+ Sbjct: 28 EVKLAIFGRAGVGKSALVVRFLTKRFIWEYDPTLESTYRHQATIDDEVVSMEILDTAGQE 87 Query: 77 D-YDRLRPLFYPDASVLLLCFDVTSPNSFDNI--FNRWYPEVNHFCKKVPIIVVGCKTDL 133 D R + + + VL+ +D+T SF+ + E+ K V +I+VG K DL Sbjct: 88 DTIQREGHMRWGEGFVLV--YDITDRGSFEEVLPLKNILDEIKK-PKNVTLILVGNKADL 144 Query: 134 CKDKSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHD-NVHAVFQE 185 + V+ G+++A + A A+ ECSA + N+ +F E Sbjct: 145 DHSRQ------------VSTEEGEKLATEL-ACAFYECSACTGEGNITEIFYE 184 >3CLV-A nrPDB Length = 208 Score = 57.0 bits (136), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 49/210 (23%), Positives = 82/210 (39%), Gaps = 54/210 (25%) Query: 17 SVKVVLVGDGGCGKTSLLMVFADGAFPESYTPTV---FERYMVNLQVKGK---------- 63 S K VL+G+ GK+S+++ F E+ T+ F Y+VNL Sbjct: 7 SYKTVLLGESSVGKSSIVLRLTKDTFHENTNTTIGASFCTYVVNLNDINIKNNSNNEKNN 66 Query: 64 -------------------------PVHLHIWDTAGQDDYDRLRPLFYPDASVLLLCFDV 98 + IWDTAGQ+ Y + PL+Y A+ ++ FD+ Sbjct: 67 NINSINDDNNVIITNQHNNYNENLCNIKFDIWDTAGQERYASIVPLYYRGATCAIVVFDI 126 Query: 99 TSPNSFDNIFNRWYPEVNHFCKKVPIIVVGCKTDLCKDKSLVNKLRRNGLEPVTYHRGQE 158 ++ N+ D W ++ II+V K D NK + + LE Y + Sbjct: 127 SNSNTLDRA-KTWVNQL-KISSNYIIILVANKIDK-------NKFQVDILEVQKYAQDNN 177 Query: 159 MARSVGAVAYLECSARLHDNVHAVFQEAAE 188 + +++ SA+ N+ +F AE Sbjct: 178 L-------LFIQTSAKTGTNIKNIFYMLAE 200 >3CON-A nrPDB Length = 190 Score = 57.0 bits (136), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 40/156 (25%), Positives = 69/156 (44%), Gaps = 17/156 (10%) Query: 30 KTSLLMVFADGAFPESYTPTVFERYMVNLQVKGKPVHLHIWDTAGQDDYDRLRPLFYPDA 89 K++L + F + Y PT+ + Y + + G+ L I DTAGQ++Y +R + Sbjct: 34 KSALTIQLIQNHFVDEYDPTIEDSYRKQVVIDGETCLLDILDTAGQEEYSAMRDQYMRTG 93 Query: 90 SVLLLCFDVTSPNSFDNIFNRWYPEVNHF--CKKVPIIVVGCKTDLCKDKSLVNKLRRNG 147 L F + + SF +I N + ++ VP+++VG K DL Sbjct: 94 EGFLCVFAINNSKSFADI-NLYREQIKRVKDSDDVPMVLVGNKCDL-------------P 139 Query: 148 LEPVTYHRGQEMARSVGAVAYLECSARLHDNVHAVF 183 V + E+A+S G + ++E SA+ V F Sbjct: 140 TRTVDTKQAHELAKSYG-IPFIETSAKTRQGVEDAF 174 >5UHV-A nrPDB Length = 166 Score = 56.6 bits (135), Expect = 7e-09, Method: Compositional matrix adjust. Identities = 40/156 (25%), Positives = 69/156 (44%), Gaps = 17/156 (10%) Query: 30 KTSLLMVFADGAFPESYTPTVFERYMVNLQVKGKPVHLHIWDTAGQDDYDRLRPLFYPDA 89 K++L + F + Y PT+ + Y + + G+ L I DTAGQ++Y +R + Sbjct: 16 KSALTIQLIQNHFVDEYDPTIEDSYRKQVVIDGETCLLDILDTAGQEEYSAMRDQYMRTG 75 Query: 90 SVLLLCFDVTSPNSFDNIFNRWYPEVNHF--CKKVPIIVVGCKTDLCKDKSLVNKLRRNG 147 L F + + SF +I N + ++ VP+++VG K DL Sbjct: 76 EGFLCVFAINNSKSFADI-NLYREQIKRVKDSDDVPMVLVGNKCDL-------------P 121 Query: 148 LEPVTYHRGQEMARSVGAVAYLECSARLHDNVHAVF 183 V + E+A+S G + ++E SA+ V F Sbjct: 122 TRTVDTKQAHELAKSYG-IPFIETSAKTRQGVEDAF 156 >4WA7-A nrPDB Length = 170 Score = 55.5 bits (132), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 39/156 (25%), Positives = 71/156 (45%), Gaps = 17/156 (10%) Query: 30 KTSLLMVFADGAFPESYTPTVFERYMVNLQVKGKPVHLHIWDTAGQDDYDRLRPLFYPDA 89 K++L + F + Y PT+ + Y + + G+ L I DTAG ++Y +R + Sbjct: 17 KSALTIQLIQNHFVDEYDPTIEDSYRKQVVIDGETCLLDILDTAGLEEYSAMRDQYMRTG 76 Query: 90 SVLLLCFDVTSPNSFDNIFNRWYPEVNHF--CKKVPIIVVGCKTDLCKDKSLVNKLRRNG 147 L F + + SF++I + + ++ + VP+++VG K DL Sbjct: 77 EGFLCVFAINNTKSFEDI-HHYREQIKRVKDSEDVPMVLVGNKCDLPS------------ 123 Query: 148 LEPVTYHRGQEMARSVGAVAYLECSARLHDNVHAVF 183 V + Q++ARS G + ++E SA+ V F Sbjct: 124 -RTVDTKQAQDLARSYG-IPFIETSAKTRQGVDDAF 157 >3CBQ-A nrPDB Length = 195 Score = 55.5 bits (132), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 55/188 (29%), Positives = 82/188 (43%), Gaps = 28/188 (14%) Query: 19 KVVLVGDGGCGKTSLLMVFA----DGAF-PESYTPTVFERYMVNLQVKGKPVHLHIWDTA 73 KV+LVG+ G GK++L F D A PE+ T R MV+ + V L ++D Sbjct: 25 KVMLVGESGVGKSTLAGTFGGLQGDSAHEPENPEDTYERRIMVDKE----EVTLVVYDIW 80 Query: 74 GQDDYDR-LRPLFYPDASVLLLCFDVTSPNSFDNI---FNRWYPEVNHFCKKVPIIVVGC 129 Q D LR L+ F VT SF + R H +P+I+VG Sbjct: 81 EQGDAGGWLRDHCLQTGDAFLIVFSVTDRRSFSKVPETLLRLRAGRPHH--DLPVILVGN 138 Query: 130 KTDLCKDKSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNVHAVFQEAAEV 189 K+DL + + V+ G+ +A ++ + ++E SA LH N +F+ A Sbjct: 139 KSDLARSRE------------VSLEEGRHLAGTL-SCKHIETSAALHHNTRELFEGAVRQ 185 Query: 190 ALSSRGRN 197 RGRN Sbjct: 186 IRLRRGRN 193 >3PIR-A nrPDB Length = 183 Score = 55.1 bits (131), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 42/167 (25%), Positives = 77/167 (46%), Gaps = 25/167 (14%) Query: 30 KTSLLMVFADGAFPESYTPTVFERYMVNLQVKGKPVHLHIWDTAGQDDYDRLRPLFYPDA 89 K++L + F F Y PT+ + Y+ + ++ + L + DTAGQ+++ +R + Sbjct: 31 KSALTIQFFQKIFVPEYDPTIEDSYLKHTEIDNQWAILDVLDTAGQEEFSAMREQYMRTG 90 Query: 90 SVLLLCFDVTSPNSFDNIFNRWYPEVNHFCKK--VPIIVVGCKTDLCKDKSLVNKLRRNG 147 L+ + VT SF+++ +R++ + + P+I+V K DL Sbjct: 91 DGFLIVYSVTDKASFEHV-DRFHQLILRVKDRESFPMILVANKVDLMH------------ 137 Query: 148 LEPVTYHRGQEMARSVGAVAYLECSAR---------LHDNVHAVFQE 185 L VT +G+EMA + Y+E SA+ HD V + Q+ Sbjct: 138 LRKVTRDQGKEMATKYN-IPYIETSAKDPPLNVDKTFHDLVRVIRQQ 183 >4CZ2-A nrPDB Length = 230 Score = 54.3 bits (129), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 42/175 (24%), Positives = 83/175 (47%), Gaps = 22/175 (12%) Query: 19 KVVLVGDGGCGKTSLLMVFADGAFPESYTPTV---FERYMVNLQVKGKPVHLHIWDTAGQ 75 KV+++G+ G GKTS++ + F + Y T+ F ++N + V L +WD AG Sbjct: 32 KVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVLNWDSR-TLVRLQLWDIAGL 90 Query: 76 DDYDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVN---HFCKKVPIIVVGCKTD 132 + + + ++Y +A + FD++ ++F+ + +W +++ H PI V Sbjct: 91 ERFGNMTRVYYKEAMGAFVVFDISRSSTFEAVL-KWKSDLDSKVHLPNGSPIPAV----- 144 Query: 133 LCKDKSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNVHAVFQEAA 187 L NK +N ++ + + + G + E SA+ DN++ +EAA Sbjct: 145 -----LLANKCDQNKDSSMSPSQMDQFCKEHGFAGWFETSAK--DNIN--IEEAA 190 >6FF8-A nrPDB Length = 181 Score = 53.5 bits (127), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 33/128 (25%), Positives = 66/128 (51%), Gaps = 10/128 (7%) Query: 19 KVVLVGDGGCGKTSLLMVFADGAFPESYTPTV---FERYMVNLQVKGKPVHLHIWDTAGQ 75 KV+++G+ G GKTS++ + F + Y T+ F ++N + V L +WD AG Sbjct: 10 KVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVLNWDSR-TLVRLQLWDIAGL 68 Query: 76 DDYDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVN---HFCKKVPI--IVVGCK 130 + + + ++Y +A + FD++ ++F+ + +W +++ H PI +++ K Sbjct: 69 ERFGNMTRVYYKEAVGAFVVFDISRSSTFEAVL-KWKSDLDSKVHLPNGSPIPAVLLANK 127 Query: 131 TDLCKDKS 138 D KD S Sbjct: 128 CDQNKDSS 135 >5C1S-A nrPDB Length = 391 Score = 52.4 bits (124), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 36/131 (27%), Positives = 62/131 (47%), Gaps = 9/131 (6%) Query: 14 GVRSVKVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMVNLQVKGKPVHLHIWDTA 73 G + +++++VG G GKT+L F ES+ E ++Q+ + + I D A Sbjct: 59 GKKEIRLLVVGSSGVGKTTLC-----DCFFESHQSQGEETREKHVQIDNDFIRISISDIA 113 Query: 74 GQDD-YDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVNHFCK-KVPIIVVGCKT 131 GQ Y P Y +L+ +D+T SF ++ W P++ +C II++G K Sbjct: 114 GQQSFYACDNP--YDGYDAILVMYDITELKSFTDLKTMWLPDIFLYCNIDTQIIIIGNKK 171 Query: 132 DLCKDKSLVNK 142 D D+ + K Sbjct: 172 DQEIDRIITRK 182 Score = 47.4 bits (111), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 28/117 (23%), Positives = 56/117 (47%), Gaps = 5/117 (4%) Query: 18 VKVVLVGDGGCGKTSLLMVFA-DGAFPESYTPTVFERYMVNLQVKGKPVHLHIWDTAGQD 76 +++++VGD GKT+ + FA + + R+ +++ + + D + Sbjct: 223 IRMLMVGDQNVGKTTFIRKFALQDPTGHDFMNAITTRF----EMEKIKYEIIMIDWGFYN 278 Query: 77 DYDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVNHFCKKVPIIVVGCKTDL 133 + P +L+ +D+T+ SF NI ++YP +N+ V ++VG KTDL Sbjct: 279 KLLQTNPAISRTIEAILIVYDITNEESFQNIHRKYYPLINNKFSDVAGVIVGYKTDL 335 >3DPU-A nrPDB Length = 535 Score = 48.9 bits (115), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 40/145 (27%), Positives = 62/145 (42%), Gaps = 22/145 (15%) Query: 1 MTAAQAAGEEAPPGVRSVKVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMVNLQV 60 + A++ GE A ++ +KV L+GDG GKTSLL E++ P + + +N+ Sbjct: 26 IEEARSKGE-ALVHLQEIKVHLIGDGMAGKTSLLKQL----IGETFDPKESQTHGLNVVT 80 Query: 61 KGKP-------------VHLHIWDTAGQDDYDRLRPLFYPDASVLLLCFDVTSPNSFDNI 107 K P H WD GQ+ F +SV +L D + D+ Sbjct: 81 KQAPNIKGLENDDELKECLFHFWDFGGQEIMHASHQFFMTRSSVYMLLLDSRT----DSN 136 Query: 108 FNRWYPEVNHFCKKVPIIVVGCKTD 132 + W + + K P+IVV K D Sbjct: 137 KHYWLRHIEKYGGKSPVIVVMNKID 161 >3Q85-A nrPDB Length = 169 Score = 48.9 bits (115), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 47/176 (26%), Positives = 77/176 (43%), Gaps = 26/176 (14%) Query: 19 KVVLVGDGGCGKTSLLMVF----ADGAFPESYTPTVFERYMVNLQVKGKPVHLHIWDTAG 74 KV+LVG+ G GK++L F D A + +ER ++ V + V L ++D Sbjct: 4 KVMLVGESGVGKSTLAGTFGGLQGDHAHEMENSEDTYERRIM---VDKEEVTLIVYDIWE 60 Query: 75 QDDYDR-LRPLFYPDASVLLLCFDVTSPNSFDNI---FNRWYPEVNHFCKKVPIIVVGCK 130 Q D L+ L+ F VT SF + R H +P+I+VG K Sbjct: 61 QGDAGGWLQDHCLQTGDAFLIVFSVTDRRSFSKVPETLLRLRAGRPH--HDLPVILVGNK 118 Query: 131 TDLCKDKSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNVHAVFQEA 186 +DL + + V+ G+ +A ++ + ++E SA LH N +F+ A Sbjct: 119 SDLARSR------------EVSLEEGRHLAGTL-SCKHIETSAALHHNTRELFEGA 161 >2NZJ-A nrPDB Length = 175 Score = 48.5 bits (114), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 49/172 (28%), Positives = 74/172 (43%), Gaps = 22/172 (12%) Query: 19 KVVLVGDGGCGKTSLLMVFA---DGAFPESYTPTVFERYMVNLQVKGKPVHLHIWDTAGQ 75 +VVL+GD G GKTSL +FA + E V+ER L V G+ L + DT Sbjct: 6 RVVLLGDPGVGKTSLASLFAGKQERDLHEQLGEDVYER---TLTVDGEDTTLVVVDTWEA 62 Query: 76 DDYDR--LRPLFYPDASVLLLCFDVTSPNSFDNIFN-RWYPEVNHFCKKVPIIVVGCKTD 132 + D+ + S ++ + + SF++ R H VPII+VG K D Sbjct: 63 EKLDKSWSQESCLQGGSAYVIVYSIADRGSFESASELRIQLRRTHQADHVPIILVGNKAD 122 Query: 133 LCKDKSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNVHAVFQ 184 L + + V+ G+ A V ++E SA L NV +F+ Sbjct: 123 LARCR------------EVSVEEGRACA-VVFDCKFIETSATLQHNVAELFE 161 >3Q72-A nrPDB Length = 166 Score = 48.1 bits (113), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 49/170 (28%), Positives = 75/170 (44%), Gaps = 21/170 (12%) Query: 19 KVVLVGDGGCGKTSLLMVFA---DGAFPESYTPTVFERYMVNLQVKGKPVHLHIWDTAGQ 75 KV+L+G G GK++L +F DG E+ T ++R +V V G+ L ++D Q Sbjct: 4 KVLLLGAPGVGKSALARIFGGVEDGPEAEAAGHT-YDRSIV---VDGEEASLMVYDIWEQ 59 Query: 76 DDYDRLRPLFYPDASVLLLCFDVTSPNSFDNIFN-RWYPEVNHFCKKVPIIVVGCKTDLC 134 D L ++ + VT SF+ R VPII+VG K+DL Sbjct: 60 DGGRWLPGHCMAMGDAYVIVYSVTDKGSFEKASELRVQLRRARQTDDVPIILVGNKSDLV 119 Query: 135 KDKSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNVHAVFQ 184 + + V+ G+ A V ++E SA LH NV A+F+ Sbjct: 120 RSRE------------VSVDEGRACA-VVFDCKFIETSAALHHNVQALFE 156 >6HLU-A nrPDB Length = 974 Score = 47.4 bits (111), Expect = 4e-06, Method: Composition-based stats. Identities = 38/136 (27%), Positives = 57/136 (41%), Gaps = 21/136 (15%) Query: 10 EAPPGVRSVKVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMVNLQVKGKP----- 64 EA ++ +KV L+GDG GKTSLL E++ P + + +N+ K P Sbjct: 473 EALVHLQEIKVHLIGDGMAGKTSLLKQL----IGETFDPKESQTHGLNVVTKQAPNIKGL 528 Query: 65 --------VHLHIWDTAGQDDYDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVN 116 H WD GQ+ F +SV +L D + D+ + W + Sbjct: 529 ENDDELKECLFHFWDFGGQEIMHASHQFFMTRSSVYMLLLDSRT----DSNKHYWLRHIE 584 Query: 117 HFCKKVPIIVVGCKTD 132 + K P+IVV K D Sbjct: 585 KYGGKSPVIVVMNKID 600 >3D6T-B nrPDB Length = 171 Score = 47.4 bits (111), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 29/130 (22%), Positives = 57/130 (43%), Gaps = 14/130 (10%) Query: 18 VKVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMVNLQVKGKPVH----------L 67 +K+++VG+ G GKT+LL + + V + VK P+ L Sbjct: 1 MKLMIVGNTGSGKTTLLQQL----MKTKKSDLGMQSATVGIDVKDWPIQIRDKRKRDLVL 56 Query: 68 HIWDTAGQDDYDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVNHFCKKVPIIVV 127 ++WD AG++++ P F ++ L +D++ + + W + P+I+V Sbjct: 57 NVWDFAGREEFYSTHPHFMTQRALYLAVYDLSKGQAEVDAMKPWLFNIKARASSSPVILV 116 Query: 128 GCKTDLCKDK 137 G D+ +K Sbjct: 117 GTHLDVSDEK 126 >4WNR-A nrPDB Length = 349 Score = 46.6 bits (109), Expect = 8e-06, Method: Compositional matrix adjust. Identities = 35/126 (27%), Positives = 51/126 (40%), Gaps = 7/126 (5%) Query: 8 GEEAPPGVRSVKVVLVGDGGCGKTSLLM-VFADGAFPESYTPTVFERYMVNLQVKGKPVH 66 GE+ P + VKV+LVGDG GKTSLL + +G + + K K + Sbjct: 34 GEKKP--LNEVKVLLVGDGEAGKTSLLKRLLGEGFDGNEHQTQGINIKKWGFKDKDKEIK 91 Query: 67 LHIWDTAGQDDYDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVNHFCKKVPIIV 126 ++ WD GQ+ F S+ +L D D W + F P++V Sbjct: 92 VNFWDFGGQEIMHATHQFFLSKRSLYILVLDSRR----DEKAEYWLKHIRSFGGDSPVLV 147 Query: 127 VGCKTD 132 K D Sbjct: 148 ALNKID 153 >2AL7-A nrPDB Length = 186 Score = 44.7 bits (104), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 38/149 (25%), Positives = 69/149 (46%), Gaps = 20/149 (13%) Query: 12 PPGVRS-VKVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMVNLQVKGKPVHLHIW 70 P G + +++ LVG GKT+ + V A G F E PTV + + KG V + IW Sbjct: 16 PRGSKEEMELTLVGLQYSGKTTFVNVIASGQFSEDMIPTVG--FNMRKVTKGN-VTIKIW 72 Query: 71 DTAGQDDYDRLRPLFYPDASVLLLCFDV-------TSPNSFDNIFNRWYPEVNHFCKKVP 123 D GQ + + + + ++ D S N N+ ++ P++ + +P Sbjct: 73 DIGGQPRFRSMWERYCRGVNAIVYMIDAADREKIEASRNELHNLLDK--PQL----QGIP 126 Query: 124 IIVVGCKTDL---CKDKSLVNKLRRNGLE 149 ++V+G K DL +K L+ K+ + ++ Sbjct: 127 VLVLGNKRDLPNALDEKQLIEKMNLSAIQ 155 >4ILE-A nrPDB Length = 184 Score = 44.3 bits (103), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 36/144 (25%), Positives = 66/144 (45%), Gaps = 19/144 (13%) Query: 16 RSVKVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMVNLQVKGKPVHLHIWDTAGQ 75 +++ LVG GKT+ + V A G F E PTV + + KG V + +WD GQ Sbjct: 21 EEMELTLVGLQYSGKTTFVNVIASGQFNEDMIPTV--GFNMRKITKGN-VTIKLWDIGGQ 77 Query: 76 DDYDRLRPLFYPDASVLLLCFDV-------TSPNSFDNIFNRWYPEVNHFCKKVPIIVVG 128 + + + S ++ D S N N+ ++ P++ + +P++V+G Sbjct: 78 PRFRSMWERYCRGVSAIVYMVDAADQEKIEASKNELHNLLDK--PQL----QGIPVLVLG 131 Query: 129 CKTDL---CKDKSLVNKLRRNGLE 149 K DL +K L+ K+ + ++ Sbjct: 132 NKRDLPGALDEKELIEKMNLSAIQ 155 >2CJW-A nrPDB Length = 192 Score = 43.1 bits (100), Expect = 8e-05, Method: Compositional matrix adjust. Identities = 42/177 (23%), Positives = 77/177 (43%), Gaps = 21/177 (11%) Query: 14 GVRSVKVVLVGDGGCGKTSLLMVFAD-----GAFPESYTPTVFERYMVNLQVKGKPVHLH 68 G+ +VVL+G+ G GK++L +FA + E +ER ++ + L Sbjct: 3 GMTYYRVVLIGEQGVGKSTLANIFAGVHDSMDSDCEVLGEDTYERTLMVDGESATIILLD 62 Query: 69 IWDTAGQDDYDRLRPLFYPDASVLLLCFDVTSPNSFDNIFN-RWYPEVNHFCKKVPIIVV 127 +W+ G++++ + DA L+ + +T SF+ R + +PII+V Sbjct: 63 MWENKGENEWLHDHCMQVGDA--YLIVYSITDRASFEKASELRIQLRRARQTEDIPIILV 120 Query: 128 GCKTDLCKDKSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNVHAVFQ 184 G K+DL + V+ G+ A V ++E SA + NV +F+ Sbjct: 121 GNKSDLVR------------CREVSVSEGRACA-VVFDCKFIETSAAVQHNVKELFE 164 >2G3Y-A nrPDB Length = 211 Score = 42.4 bits (98), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 42/180 (23%), Positives = 77/180 (42%), Gaps = 21/180 (11%) Query: 11 APPGVRSVKVVLVGDGGCGKTSLLMVFAD-----GAFPESYTPTVFERYMVNLQVKGKPV 65 + G +VVL+G+ G GK++L +FA + E +ER ++ + Sbjct: 31 SESGNTYYRVVLIGEQGVGKSTLANIFAGVHDSMDSDCEVLGEDTYERTLMVDGESATII 90 Query: 66 HLHIWDTAGQDDYDRLRPLFYPDASVLLLCFDVTSPNSFDNIFN-RWYPEVNHFCKKVPI 124 L +W+ G++++ + DA L+ + +T SF+ R + +PI Sbjct: 91 LLDMWENKGENEWLHDHCMQVGDA--YLIVYSITDRASFEKASELRIQLRRARQTEDIPI 148 Query: 125 IVVGCKTDLCKDKSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNVHAVFQ 184 I+VG K+DL + V+ G+ A V ++E SA + NV +F+ Sbjct: 149 ILVGNKSDLVR------------CREVSVSEGRACA-VVFDCKFIETSAAVQHNVKELFE 195 >3C5C-A nrPDB Length = 187 Score = 41.6 bits (96), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 44/180 (24%), Positives = 74/180 (41%), Gaps = 16/180 (8%) Query: 14 GVRSVKVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMVNLQVKGKPVHLHIWDTA 73 G V + ++G G GK++L + F F Y P + + Y V +PVHL + DTA Sbjct: 18 GPLEVNLAILGRRGAGKSALTVKFLTKRFISEYDPNLEDTYSSEETVDHQPVHLRVMDTA 77 Query: 74 GQDD-YDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYP-EVNHFCKKVPIIVVGCKT 131 D + R L + A +++ D + + + +P +++G K Sbjct: 78 DLDTPRNCERYLNWAHAFLVVYSVDSRQSFDSSSSYLELLALHAKETQRSIPALLLGNKL 137 Query: 132 DLCKDKSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLH-DNVHAVFQEAAEVA 190 D+ + + VT G +A G + + E SA L ++V VF EA A Sbjct: 138 DMAQYRQ------------VTKAEGVALAGRFGCL-FFEVSACLDFEHVQHVFHEAVREA 184 >3IHW-A nrPDB Length = 184 Score = 38.9 bits (89), Expect = 0.002, Method: Compositional matrix adjust. Identities = 41/181 (22%), Positives = 81/181 (44%), Gaps = 19/181 (10%) Query: 18 VKVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMVNLQVKGKPVHLHIWDTAGQDD 77 +KV +VG+ GK++L+ + G + + +P R+ + V G+ L I D G + Sbjct: 21 LKVGIVGNLSSGKSALVHRYLTGTYVQEESPE-GGRFKKEIVVDGQSYLLLIRDEGGPPE 79 Query: 78 YDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVNHF--CKKVPIIVVGCKTDLCK 135 L+ + DA V + F + SF ++N ++ + F +VP+++VG + + Sbjct: 80 ---LQFAAWVDAVVFV--FSLEDEISFQTVYN-YFLRLCSFRNASEVPMVLVGTQDAISA 133 Query: 136 DKSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNVHAVFQEAAEVALSSRG 195 V + R ++++ + Y E A NV VFQ+ A+ ++ R Sbjct: 134 ANPRV----------IDDSRARKLSTDLKRCTYYETCATYGLNVERVFQDVAQKVVALRK 183 Query: 196 R 196 + Sbjct: 184 K 184 >4C0K-A nrPDB Length = 423 Score = 38.5 bits (88), Expect = 0.002, Method: Compositional matrix adjust. Identities = 36/129 (27%), Positives = 60/129 (46%), Gaps = 21/129 (16%) Query: 16 RSV-KVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMVNL-------QVKGKPVHL 67 RSV K ++G G GKT + G E + + + N+ QV G+ HL Sbjct: 244 RSVYKCHVIGPKGSGKTGM----CRGFLVEDMHKLIGKEFKTNVVNCINSVQVYGQEKHL 299 Query: 68 HIWDTAGQDDYDRLRPLFYPDASVLLLCFDVTSPNSFD---NIFNRWYPEVNHFCKKVPI 124 + D + D L+P + V L +D ++P SF+ I+ ++Y E K+P+ Sbjct: 300 ILRDIDVRHALDPLQPQEV-NCDVACLVYDSSNPRSFEYVARIYIKYYAE-----SKIPV 353 Query: 125 IVVGCKTDL 133 ++VG K D+ Sbjct: 354 MIVGTKCDM 362 >2GJ9-A nrPDB Length = 172 Score = 38.5 bits (88), Expect = 0.002, Method: Compositional matrix adjust. Identities = 38/134 (28%), Positives = 58/134 (43%), Gaps = 15/134 (11%) Query: 14 GVRSVKVVLVGDGGCGKTSLLMVFA--DGAFPESYTPTVFERYMVNLQVKGKPVHLHIWD 71 G +KVV+ G GK+SLL A + A T + ++ + G P LHI D Sbjct: 1 GSHGMKVVIAGRPNAGKSSLLNALAGREAAIVTDIAGTTRDVLREHIHIDGMP--LHIID 58 Query: 72 TAG----QDDYDRLRP----LFYPDASVLLLCFDVTSPNSFDNIFNRWYPE-VNHFCKKV 122 TAG D+ +R+ A +L D T+ ++ D +PE + K+ Sbjct: 59 TAGLREASDEVERIGIERAWQEIEQADRVLFMVDGTTTDAVDPA--EIWPEFIARLPAKL 116 Query: 123 PIIVVGCKTDLCKD 136 PI VV K D+ + Sbjct: 117 PITVVRNKADITGE 130 >3LRP-A nrPDB Length = 181 Score = 37.0 bits (84), Expect = 0.005, Method: Compositional matrix adjust. Identities = 31/123 (25%), Positives = 55/123 (44%), Gaps = 13/123 (10%) Query: 16 RSVKVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMVNLQ-VKGKPVHLHIWDTAG 74 + V++++VG GKT++L G + PT+ N++ V+ + + +WD G Sbjct: 16 KDVRILMVGLDAAGKTTILYKVKLGEVVTT-IPTI----GFNVETVEFRNISFTVWDVGG 70 Query: 75 QDDYDRLRPL---FYPDASVLLLCFDVTSPNSFDNIFNRWYPEVN-HFCKKVPIIVVGCK 130 Q D++RPL +Y + L+ D D+ + +N K I+V K Sbjct: 71 Q---DKIRPLWRHYYSNTDGLIFVVDSNDRERIDDAREELHRMINEEELKDAIILVFANK 127 Query: 131 TDL 133 DL Sbjct: 128 QDL 130 >4YLG-A nrPDB Length = 173 Score = 37.0 bits (84), Expect = 0.007, Method: Compositional matrix adjust. Identities = 32/143 (22%), Positives = 62/143 (43%), Gaps = 13/143 (9%) Query: 14 GVRSVKVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMVNLQ-VKGKPVHLHIWDT 72 G + +++++VG GKTS+L G + PT+ N++ V+ K + +WD Sbjct: 10 GKKEMRILMVGLDAAGKTSILYKLKLGEIVTT-IPTIG----FNVETVEYKNISFTVWDV 64 Query: 73 AGQDDYDRLRPL---FYPDASVLLLCFDVTSPNSFDNIFNRWYPEVNH-FCKKVPIIVVG 128 GQ D++RPL +Y + ++ D + +N + ++V Sbjct: 65 GGQ---DKIRPLWRHYYQNTQAIIFVVDSNDRDRIGEAREELMKMLNEDEMRNAILLVFA 121 Query: 129 CKTDLCKDKSLVNKLRRNGLEPV 151 K DL + S+ + GL+ + Sbjct: 122 NKHDLPQAMSISEVTEKLGLQTI 144 >2YC4-C nrPDB Length = 208 Score = 35.4 bits (80), Expect = 0.016, Method: Compositional matrix adjust. Identities = 34/124 (27%), Positives = 57/124 (45%), Gaps = 10/124 (8%) Query: 19 KVVLVGDGGCGKTSLLMVFAD--GAFPESYTPTVFERYMV---NLQVKGKPVHLHIWDTA 73 KV +VG+ GK++L+ +F F + Y T +V + V L + DTA Sbjct: 22 KVAVVGEATVGKSALISMFTSKGSKFLKDYAMTSGVEVVVAPVTIPDTTVSVELFLLDTA 81 Query: 74 GQDDYDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVNHF--CKKVPI--IVVGC 129 G D Y ++ +L FDV+S SF++ W+ + ++ P+ ++V Sbjct: 82 GSDLYKEQISQYWNGVYYAILVFDVSSMESFESC-KAWFELLKSARPDRERPLRAVLVAN 140 Query: 130 KTDL 133 KTDL Sbjct: 141 KTDL 144 >6CES-A nrPDB Length = 313 Score = 35.0 bits (79), Expect = 0.025, Method: Compositional matrix adjust. Identities = 29/101 (28%), Positives = 43/101 (42%), Gaps = 18/101 (17%) Query: 12 PPGVRSVKVVLVGDGGCGKTSLL-MVFADGAFPESYTPTVFERYMVNLQVKGKPVH---- 66 P KV+L+G G GKTS+ ++FA+ Y R + V+ V Sbjct: 2 PNTAMKKKVLLMGKSGSGKTSMRSIIFAN------YIARDTRRLGATIDVEHSHVRFLGN 55 Query: 67 --LHIWDTAGQDD-----YDRLRPLFYPDASVLLLCFDVTS 100 L++WD GQD + R + + VL+ FDV S Sbjct: 56 LVLNLWDCGGQDTFMENYFTSQRDNIFRNVEVLIYVFDVES 96 >2IWR-A nrPDB Length = 178 Score = 34.7 bits (78), Expect = 0.028, Method: Compositional matrix adjust. Identities = 40/181 (22%), Positives = 77/181 (42%), Gaps = 21/181 (11%) Query: 18 VKVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMVNLQVKGKPVHLHIWDTAGQDD 77 +++ ++GD GK+SL+ F G++ + T E+Y + V G+ + I + AG D Sbjct: 8 LRLGVLGDARSGKSSLIHRFLTGSY-QVLEKTESEQYKKEMLVDGQTHLVLIREEAGAPD 66 Query: 78 YDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVNHFCKK----VPIIVVGCKTDL 133 F A ++ F + NSF + +R + +++ + + + +VG + + Sbjct: 67 AK-----FSGWADAVIFVFSLEDENSFQAV-SRLHGQLSSLRGEGRGGLALALVGTQDRI 120 Query: 134 CKDKSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNVHAVFQEAAEVALSS 193 V V R + + + +Y E A NV VFQE A+ ++ Sbjct: 121 SASSPRV----------VGDARARALCADMKRCSYYETCATYGLNVDRVFQEVAQKVVTL 170 Query: 194 R 194 R Sbjct: 171 R 171 >2A5F-A nrPDB Length = 175 Score = 34.7 bits (78), Expect = 0.030, Method: Compositional matrix adjust. Identities = 32/125 (25%), Positives = 56/125 (44%), Gaps = 13/125 (10%) Query: 14 GVRSVKVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMVNLQ-VKGKPVHLHIWDT 72 G + ++++++G GKT++L G + PTV N++ V K V ++WD Sbjct: 10 GNKEMRILMLGLDAAGKTTILYKLKLGQ-SVTTIPTVG----FNVETVTYKNVKFNVWDV 64 Query: 73 AGQDDYDRLRPL---FYPDASVLLLCFDVTSPNSFDNIFNRWYPEVNHFCKKVPIIVV-G 128 GQ D++RPL +Y L+ D + D + +N + II++ Sbjct: 65 GGQ---DKIRPLWRHYYTGTQGLIFVVDCADRDRIDEARQELHRIINDREMRDAIILIFA 121 Query: 129 CKTDL 133 K DL Sbjct: 122 NKQDL 126 >5NZV-F nrPDB Length = 181 Score = 33.9 bits (76), Expect = 0.046, Method: Compositional matrix adjust. Identities = 22/85 (25%), Positives = 41/85 (48%), Gaps = 6/85 (7%) Query: 14 GVRSVKVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMVNLQ-VKGKPVHLHIWDT 72 G + +++++VG G GKT++L G + PT+ N++ V+ K + +WD Sbjct: 14 GNKEMRILMVGLDGAGKTTVLYKLKLGEVITT-IPTI----GFNVETVQYKNISFTVWDV 68 Query: 73 AGQDDYDRLRPLFYPDASVLLLCFD 97 GQD L +Y + ++ D Sbjct: 69 GGQDRIRSLWRHYYRNTEGVIFVVD 93 >3LVQ-E nrPDB Length = 497 Score = 33.9 bits (76), Expect = 0.058, Method: Compositional matrix adjust. Identities = 32/136 (23%), Positives = 56/136 (41%), Gaps = 12/136 (8%) Query: 2 TAAQAAGEEAPPGVRSVKVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMVNLQVK 61 TA+ + G E + ++++++G GKT++L G + F V Sbjct: 308 TASNSPGIEGLSN-KEMRILMLGLDAAGKTTILYKLKLGQSVTTIPTVGFNVETVTY--- 363 Query: 62 GKPVHLHIWDTAGQDDYDRLRPL---FYPDASVLLLCFDVTSPNSFDNIFNRWYPEVNHF 118 K V ++WD GQ D++RPL +Y L+ D + D + +N Sbjct: 364 -KNVKFNVWDVGGQ---DKIRPLWRHYYTGTQGLIFVVDCADRDRIDEARQELHRIINDR 419 Query: 119 CKKVPIIVV-GCKTDL 133 + II++ K DL Sbjct: 420 EMRDAIILIFANKQDL 435 >1YZG-A nrPDB Length = 179 Score = 33.5 bits (75), Expect = 0.060, Method: Compositional matrix adjust. Identities = 25/116 (21%), Positives = 46/116 (39%), Gaps = 5/116 (4%) Query: 19 KVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMVNLQVKGKPVHLHIWDTAGQDDY 78 KV++VG GKT++L F + +PT+ ++ K H +WD GQ+ Sbjct: 18 KVIIVGLDNAGKTTILYQFLMNEVVHT-SPTIGSNVE---EIVVKNTHFLMWDIGGQESL 73 Query: 79 DRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVNHF-CKKVPIIVVGCKTDL 133 +Y + ++L D Y + H +K +++ K D+ Sbjct: 74 RSSWNTYYSNTEFIILVVDSIDRERLAITKEELYRMLAHEDLRKAAVLIFANKQDM 129 >3O47-A nrPDB Length = 329 Score = 33.5 bits (75), Expect = 0.071, Method: Compositional matrix adjust. Identities = 21/73 (28%), Positives = 39/73 (53%), Gaps = 9/73 (12%) Query: 14 GVRSVKVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMVNLQ-VKGKPVHLHIWDT 72 G + +++++VG GKT++L G + PT+ N++ V+ K + +WD Sbjct: 162 GKKEMRILMVGLDAAGKTTILYKLKLGEIVTT-IPTI----GFNVETVEYKNISFTVWDV 216 Query: 73 AGQDDYDRLRPLF 85 GQ D++RPL+ Sbjct: 217 GGQ---DKIRPLW 226 >5UF8-A nrPDB Length = 181 Score = 33.1 bits (74), Expect = 0.079, Method: Compositional matrix adjust. Identities = 21/73 (28%), Positives = 39/73 (53%), Gaps = 9/73 (12%) Query: 14 GVRSVKVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMVNLQ-VKGKPVHLHIWDT 72 G + +++++VG GKT++L G + PT+ N++ V+ K + +WD Sbjct: 14 GNKEMRILMVGLDAAGKTTILYKLKLGEIVTT-IPTI----GFNVETVEYKNISFTVWDV 68 Query: 73 AGQDDYDRLRPLF 85 GQ D++RPL+ Sbjct: 69 GGQ---DKIRPLW 78 >6GNI-B nrPDB Length = 167 Score = 33.1 bits (74), Expect = 0.083, Method: Compositional matrix adjust. Identities = 29/124 (23%), Positives = 52/124 (41%), Gaps = 23/124 (18%) Query: 19 KVVLVGDGGCGKTSLLMVFAD---GAFPESYTPTVFERYMVNLQVKGKPVHLHIWDTAGQ 75 K++ +G GKT+LL + + ++ PT E + N++ +D G Sbjct: 3 KLLFLGLDNAGKTTLLHMLKNDRLATLQPTWHPTSEELAIGNIKFT-------TFDLGGH 55 Query: 76 DDYDRLRPLFYPDASVLLLCFDVTSPNSFDN-------IFNRWYPEVNHFCKKVPIIVVG 128 RL ++P+ + ++ D P FD +FN E+ K VP +++G Sbjct: 56 IQARRLWKDYFPEVNGIVFLVDAADPERFDEARVELDALFN--IAEL----KDVPFVILG 109 Query: 129 CKTD 132 K D Sbjct: 110 NKID 113 >1Z6X-A nrPDB Length = 180 Score = 33.1 bits (74), Expect = 0.094, Method: Compositional matrix adjust. Identities = 22/73 (30%), Positives = 39/73 (53%), Gaps = 9/73 (12%) Query: 14 GVRSVKVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMVNLQ-VKGKPVHLHIWDT 72 G + +++++VG GKT++L G + PT+ N++ V+ K + +WD Sbjct: 14 GKKQMRILMVGLDAAGKTTILYKLKLGEIVTT-IPTIG----FNVETVEYKNICFTVWDV 68 Query: 73 AGQDDYDRLRPLF 85 GQ DR+RPL+ Sbjct: 69 GGQ---DRIRPLW 78 >1M2O-B nrPDB Length = 190 Score = 33.1 bits (74), Expect = 0.095, Method: Compositional matrix adjust. Identities = 29/124 (23%), Positives = 52/124 (41%), Gaps = 23/124 (18%) Query: 19 KVVLVGDGGCGKTSLLMVFAD---GAFPESYTPTVFERYMVNLQVKGKPVHLHIWDTAGQ 75 K++ +G GKT+LL + + ++ PT E + N++ +D G Sbjct: 25 KLLFLGLDNAGKTTLLHMLKNDRLATLQPTWHPTSEELAIGNIKFT-------TFDLGGH 77 Query: 76 DDYDRLRPLFYPDASVLLLCFDVTSPNSFDN-------IFNRWYPEVNHFCKKVPIIVVG 128 RL ++P+ + ++ D P FD +FN E+ K VP +++G Sbjct: 78 IQARRLWKDYFPEVNGIVFLVDAADPERFDEARVELDALFN--IAEL----KDVPFVILG 131 Query: 129 CKTD 132 K D Sbjct: 132 NKID 135 >6FAE-B nrPDB Length = 213 Score = 33.1 bits (74), Expect = 0.099, Method: Compositional matrix adjust. Identities = 23/86 (26%), Positives = 44/86 (51%), Gaps = 12/86 (13%) Query: 16 RSVKVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMVNLQ-VKGKPVHLHIWDTAG 74 +S+++++VG GKT++L G + PT+ N++ V+ K + +WD G Sbjct: 48 QSMRILMVGLDAAGKTTILYKLKLGEIVTT-IPTI----GFNVETVEYKNISFTVWDVGG 102 Query: 75 QDDYDRLRPL---FYPDASVLLLCFD 97 Q D++RPL ++ + L+ D Sbjct: 103 Q---DKIRPLWRHYFQNTQGLIFVVD 125 >4ZI3-A nrPDB Length = 190 Score = 32.7 bits (73), Expect = 0.11, Method: Compositional matrix adjust. Identities = 28/122 (22%), Positives = 53/122 (43%), Gaps = 11/122 (9%) Query: 16 RSVKVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMVNLQVKGKPVHLHIWDTAGQ 75 + V+++L+G GKT+LL A TPT + + + V+ + L++WD GQ Sbjct: 16 QEVRILLLGLDNAGKTTLLKQLASEDISH-ITPT--QGFNIK-SVQSQGFKLNVWDIGGQ 71 Query: 76 DDYDRLRPL---FYPDASVLLLCFDVTSPNSFDNIFNRWYPEVNHFCKK-VPIIVVGCKT 131 ++RP ++ + +L+ D F+ + VP+++ K Sbjct: 72 ---RKIRPYWRSYFENTDILIYVIDSADRKRFEETGQELTELLEEEKLSCVPVLIFANKQ 128 Query: 132 DL 133 DL Sbjct: 129 DL 130 >4M9Q-A nrPDB Length = 227 Score = 32.7 bits (73), Expect = 0.13, Method: Compositional matrix adjust. Identities = 31/123 (25%), Positives = 49/123 (39%), Gaps = 9/123 (7%) Query: 14 GVRSVKVVLVGDGGCGKTSLLMVFADGAFPESYTPTV-FERYMVNLQVKGKPVHLHIWDT 72 G R + + L+G GKT+LL G TPT F +N +GK + ++D Sbjct: 1 GPRKITIALLGLDNAGKTTLLNSI-QGEVDRDTTPTFGFNSTTLN---EGK-YKIEVFDL 55 Query: 73 AGQDDYDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEV--NHFCKKVPIIVVGCK 130 G + + + + ++ D P F+ EV N F + PI + K Sbjct: 56 GGGKNIRGVWKKYLAEVHAIVYVVDAADPGRFEE-SKMTMAEVLENQFMRDKPICIFANK 114 Query: 131 TDL 133 DL Sbjct: 115 QDL 117 >5DI3-B nrPDB Length = 263 Score = 32.7 bits (73), Expect = 0.13, Method: Compositional matrix adjust. Identities = 31/123 (25%), Positives = 49/123 (39%), Gaps = 9/123 (7%) Query: 14 GVRSVKVVLVGDGGCGKTSLLMVFADGAFPESYTPTV-FERYMVNLQVKGKPVHLHIWDT 72 G R + + L+G GKT+LL G TPT F +N +GK + ++D Sbjct: 1 GPRKITIALLGLDNAGKTTLLNSIQ-GEVDRDTTPTFGFNSTTLN---EGK-YKIEVFDL 55 Query: 73 AGQDDYDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEV--NHFCKKVPIIVVGCK 130 G + + + + ++ D P F+ EV N F + PI + K Sbjct: 56 GGGKNIRGVWKKYLAEVHAIVYVVDAADPGRFEE-SKMTMAEVLENQFMRDKPICIFANK 114 Query: 131 TDL 133 DL Sbjct: 115 QDL 117 >3AQ4-A nrPDB Length = 184 Score = 31.6 bits (70), Expect = 0.24, Method: Compositional matrix adjust. Identities = 22/86 (25%), Positives = 43/86 (50%), Gaps = 12/86 (13%) Query: 16 RSVKVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMVNLQ-VKGKPVHLHIWDTAG 74 + +++++VG GKT++L G + PT+ N++ V+ K + +WD G Sbjct: 19 KEMRILMVGLDAAGKTTILYKLKLGEIVTT-IPTI----GFNVETVEYKNISFTVWDVGG 73 Query: 75 QDDYDRLRPL---FYPDASVLLLCFD 97 Q D++RPL ++ + L+ D Sbjct: 74 Q---DKIRPLWRHYFQNTQGLIFVVD 96 >2H16-A nrPDB Length = 183 Score = 31.6 bits (70), Expect = 0.26, Method: Compositional matrix adjust. Identities = 25/119 (21%), Positives = 48/119 (40%), Gaps = 11/119 (9%) Query: 19 KVVLVGDGGCGKTSLLMVFADGAFPESYTPTV---FERYMVNLQVKGKPVHLHIWDTAGQ 75 KV++VG GKT++L F+ + +PT+ E ++N +WD GQ Sbjct: 24 KVIIVGLDNAGKTTILYQFSMNEVVHT-SPTIGSNVEEIVIN------NTRFLMWDIGGQ 76 Query: 76 DDYDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVNHF-CKKVPIIVVGCKTDL 133 + +Y + +++ D T Y + H +K +++ K D+ Sbjct: 77 ESLRSSWNTYYTNTEFVIVVVDSTDRERISVTREELYKMLAHEDLRKAGLLIFANKQDV 135 >2B6H-A nrPDB Length = 192 Score = 31.2 bits (69), Expect = 0.33, Method: Compositional matrix adjust. Identities = 23/88 (26%), Positives = 44/88 (50%), Gaps = 12/88 (13%) Query: 14 GVRSVKVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMVNLQ-VKGKPVHLHIWDT 72 G + +++++VG GKT++L G + PT+ N++ V+ K + +WD Sbjct: 26 GKKQMRILMVGLDAAGKTTILYKLKLGEIVTT-IPTIG----FNVETVEYKNICFTVWDV 80 Query: 73 AGQDDYDRLRPL---FYPDASVLLLCFD 97 GQ D++RPL ++ + L+ D Sbjct: 81 GGQ---DKIRPLWRHYFQNTQGLIFVVD 105 >1MOZ-A nrPDB Length = 183 Score = 31.2 bits (69), Expect = 0.36, Method: Compositional matrix adjust. Identities = 22/91 (24%), Positives = 45/91 (49%), Gaps = 12/91 (13%) Query: 16 RSVKVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMVNLQ-VKGKPVHLHIWDTAG 74 + ++++++G G GKT++L G + PT+ N++ + K + L++WD G Sbjct: 17 KELRILILGLDGAGKTTILYRLQIGEVVTT-KPTIG----FNVETLSYKNLKLNVWDLGG 71 Query: 75 QDDYDRLRPL---FYPDASVLLLCFDVTSPN 102 Q +RP +Y D + ++ D T + Sbjct: 72 Q---TSIRPYWRCYYADTAAVIFVVDSTDKD 99 >3BH6-A nrPDB Length = 164 Score = 30.4 bits (67), Expect = 0.55, Method: Compositional matrix adjust. Identities = 28/124 (22%), Positives = 52/124 (41%), Gaps = 11/124 (8%) Query: 14 GVRSVKVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMVNLQVKGKPVHLHIWDTA 73 G V+++L+G GKT+LL A TPT + + + V+ + L++WD Sbjct: 1 GGSEVRILLLGLDNAGKTTLLKQLASEDISH-ITPT--QGFNIK-SVQSQGFKLNVWDIG 56 Query: 74 GQDDYDRLRPL---FYPDASVLLLCFDVTSPNSFDNIFNRWYPEVNHFCKK-VPIIVVGC 129 G ++RP ++ + +L+ D F+ + VP+++ Sbjct: 57 G---LRKIRPYWRSYFENTDILIYVIDSADRKRFEETGQELTELLEEEKLSCVPVLIFAN 113 Query: 130 KTDL 133 K DL Sbjct: 114 KQDL 117 >1J2J-A nrPDB Length = 166 Score = 30.0 bits (66), Expect = 0.70, Method: Compositional matrix adjust. Identities = 22/85 (25%), Positives = 42/85 (49%), Gaps = 12/85 (14%) Query: 17 SVKVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMVNLQ-VKGKPVHLHIWDTAGQ 75 S+++++VG GKT++L G + PT+ N++ V+ K + +WD G Sbjct: 2 SMRILMVGLDAAGKTTILYKLKLGEIVTT-IPTIG----FNVETVEYKNISFTVWDVGG- 55 Query: 76 DDYDRLRPL---FYPDASVLLLCFD 97 D++RPL ++ + L+ D Sbjct: 56 --LDKIRPLWRHYFQNTQGLIFVVD 78 >2YYZ-A nrPDB Length = 359 Score = 28.5 bits (62), Expect = 2.2, Method: Compositional matrix adjust. Identities = 17/45 (37%), Positives = 23/45 (51%), Gaps = 5/45 (11%) Query: 20 VVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMVNLQVKGKP 64 V L+G GCGKT+ L++ A Y PT E Y ++ V P Sbjct: 32 VALLGPSGCGKTTTLLMLAG-----IYKPTSGEIYFDDVLVNDIP 71 >5IRR-A nrPDB Length = 308 Score = 28.5 bits (62), Expect = 2.3, Method: Compositional matrix adjust. Identities = 16/42 (38%), Positives = 23/42 (54%), Gaps = 14/42 (33%) Query: 18 VKVVLVGDGGCGKTSLL----------MVFADGAFPESYTPT 49 +K+++VGD G GKT+L+ + DG SYTPT Sbjct: 27 IKLIVVGDSGLGKTTLIKSLISIPGERLQVHDG----SYTPT 64 >1SHZ-A nrPDB Length = 340 Score = 28.5 bits (62), Expect = 2.4, Method: Compositional matrix adjust. Identities = 15/59 (25%), Positives = 27/59 (45%), Gaps = 7/59 (11%) Query: 9 EEAPPGVRSVKVVLVGDGGCGKTSLLMVFA-------DGAFPESYTPTVFERYMVNLQV 60 E+ R VK++L+G G GK++ L D E + PT++ + ++V Sbjct: 4 EDGEKAAREVKLLLLGAGESGKSTFLKQMRIIHGQDFDQRAREEFRPTIYSNVIKGMRV 62 >2CC0-A nrPDB Length = 195 Score = 28.1 bits (61), Expect = 2.5, Method: Compositional matrix adjust. Identities = 11/26 (42%), Positives = 19/26 (73%) Query: 137 KSLVNKLRRNGLEPVTYHRGQEMARS 162 +SL+N LR+NGL +++GQ A++ Sbjct: 20 QSLLNALRQNGLRATMFNQGQYAAQN 45 >2X77-A nrPDB Length = 189 Score = 28.1 bits (61), Expect = 2.7, Method: Compositional matrix adjust. Identities = 28/126 (22%), Positives = 53/126 (42%), Gaps = 13/126 (10%) Query: 13 PGVRSVKVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMVNLQ-VKGKPVHLHIWD 71 P R ++V+++G GKTS+L G + VNL+ ++ K + +WD Sbjct: 18 PADRKIRVLMLGLDNAGKTSILYRLHLGDVVTTVPTV-----GVNLETLQYKNISFEVWD 72 Query: 72 TAGQDDYDRLRPL---FYPDASVLLLCFDVTSPNSFDNIFNRWYPEVNH-FCKKVPIIVV 127 GQ +RP ++ D ++ D T + + Y ++ +K +++ Sbjct: 73 LGGQTG---VRPYWRCYFSDTDAVIYVVDSTDRDRMGVAKHELYALLDEDELRKSLLLIF 129 Query: 128 GCKTDL 133 K DL Sbjct: 130 ANKQDL 135 >1D5A-A nrPDB Length = 733 Score = 27.7 bits (60), Expect = 3.3, Method: Composition-based stats. Identities = 22/87 (25%), Positives = 40/87 (45%), Gaps = 12/87 (13%) Query: 69 IWDTAGQDDYDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWY---PEVNH-FCKKVPI 124 +W+ DY L P +++ +V SP++ + R Y P+V H FCK P Sbjct: 396 LWENIVYLDYKSLYP-------SIIITHNV-SPDTLNREGCREYDVAPQVGHRFCKDFPG 447 Query: 125 IVVGCKTDLCKDKSLVNKLRRNGLEPV 151 + DL +++ V K + ++P+ Sbjct: 448 FIPSLLGDLLEERQKVKKKMKATVDPI 474 >5KDW-A nrPDB Length = 885 Score = 27.7 bits (60), Expect = 3.5, Method: Compositional matrix adjust. Identities = 16/49 (32%), Positives = 23/49 (46%), Gaps = 2/49 (4%) Query: 25 DGGCGKTSLLMVFADGAFPESYTPTVFERYMVNLQVKGKPVHLHIWDTA 73 D C TS L+V +GA S + TV R L + VH + W+ + Sbjct: 171 DASCASTSKLLVLGNGASAASLSATVRARLQAGLPI--LFVHTNGWNQS 217 >3A52-A nrPDB Length = 400 Score = 27.7 bits (60), Expect = 3.5, Method: Compositional matrix adjust. Identities = 15/40 (37%), Positives = 21/40 (52%), Gaps = 1/40 (2%) Query: 20 VVLVGDG-GCGKTSLLMVFADGAFPESYTPTVFERYMVNL 58 +++VGDG G TS F D E TVF+R +V + Sbjct: 4 IIMVGDGMGPAYTSAYRYFQDNPDTEEIEQTVFDRLLVGM 43 >6D2K-A nrPDB Length = 288 Score = 27.7 bits (60), Expect = 3.5, Method: Compositional matrix adjust. Identities = 12/29 (41%), Positives = 17/29 (58%), Gaps = 2/29 (6%) Query: 174 RLHDNVHAVFQEAAEVALSSRG--RNFWR 200 +LH VH +Q+ E L SR +NFW+ Sbjct: 247 KLHPEVHGPYQDTLEFLLGSRDECKNFWK 275 >1ZCB-A nrPDB Length = 362 Score = 27.7 bits (60), Expect = 4.0, Method: Compositional matrix adjust. Identities = 15/59 (25%), Positives = 27/59 (45%), Gaps = 7/59 (11%) Query: 9 EEAPPGVRSVKVVLVGDGGCGKTSLLMVFA-------DGAFPESYTPTVFERYMVNLQV 60 E+ R VK++L+G G GK++ L D E + PT++ + ++V Sbjct: 25 EDGERSARLVKILLLGAGESGKSTFLKQMRIIHGQDFDQRAREEFRPTIYSNVIKGMRV 83 >5KSO-A nrPDB Length = 190 Score = 27.3 bits (59), Expect = 4.6, Method: Compositional matrix adjust. Identities = 18/72 (25%), Positives = 36/72 (50%), Gaps = 14/72 (19%) Query: 91 VLLLCFDVTSPNSFD---NIFNRWYPEVNHFCKKVPIIVVGCKTDLCKDKSLVNKLRRNG 147 V+ L +DV++P SF+ IF + + + ++P ++V K+DL + K + Sbjct: 81 VVCLVYDVSNPKSFEYCARIFKQHFMD-----SRIPCLIVAAKSDLHEVK------QEYS 129 Query: 148 LEPVTYHRGQEM 159 + P + R +M Sbjct: 130 ISPTDFCRKHKM 141 >6HQW-A nrPDB Length = 445 Score = 27.3 bits (59), Expect = 5.2, Method: Compositional matrix adjust. Identities = 15/43 (34%), Positives = 22/43 (51%), Gaps = 4/43 (9%) Query: 47 TPTVFERYMVNLQ--VKGKPVHLHIWDTAGQDDY--DRLRPLF 85 +PT E + L+ + P H H WD + D Y DR +P+F Sbjct: 17 SPTATEAFAAWLKDNPQAIPAHSHPWDVSRSDIYVEDRWQPIF 59 >4LTY-C nrPDB Length = 354 Score = 26.9 bits (58), Expect = 6.0, Method: Compositional matrix adjust. Identities = 11/24 (45%), Positives = 15/24 (62%) Query: 39 DGAFPESYTPTVFERYMVNLQVKG 62 D P SY T++ R++VNLQ G Sbjct: 65 DTGSPPSYARTLYNRFVVNLQQTG 88 >5KU1-A nrPDB Length = 424 Score = 26.9 bits (58), Expect = 7.1, Method: Compositional matrix adjust. Identities = 18/72 (25%), Positives = 36/72 (50%), Gaps = 14/72 (19%) Query: 91 VLLLCFDVTSPNSFD---NIFNRWYPEVNHFCKKVPIIVVGCKTDLCKDKSLVNKLRRNG 147 V+ L +DV++P SF+ IF + + + ++P ++V K+DL + K + Sbjct: 315 VVCLVYDVSNPKSFEYCARIFKQHFMD-----SRIPCLIVAAKSDLHEVK------QEYS 363 Query: 148 LEPVTYHRGQEM 159 + P + R +M Sbjct: 364 ISPTDFCRKHKM 375 >3PV0-A nrPDB Length = 381 Score = 26.6 bits (57), Expect = 8.7, Method: Compositional matrix adjust. Identities = 11/19 (57%), Positives = 14/19 (73%) Query: 20 VVLVGDGGCGKTSLLMVFA 38 VV VG GCGK++LL + A Sbjct: 32 VVFVGPSGCGKSTLLRMIA 50 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: 2J1L-A nrPDB 284 2e-77 5C2K-A nrPDB 259 8e-70 5JCP-B nrPDB 257 4e-69 5ZHX-e nrPDB 254 2e-68 3RYT-C nrPDB 250 3e-67 3TH5-A nrPDB 248 1e-66 3VHL-B nrPDB 245 1e-65 2WKQ-A nrPDB 242 7e-65 2FV8-A nrPDB 240 2e-64 2W2X-A nrPDB 240 3e-64 2NTY-C nrPDB 240 3e-64 2WBL-C nrPDB 240 4e-64 1RYH-A nrPDB 240 4e-64 3BWD-D nrPDB 238 1e-63 2J0V-A nrPDB 237 2e-63 3A58-B nrPDB 235 8e-63 5ZVP-A nrPDB 235 1e-62 2ATX-A nrPDB 233 5e-62 5VCU-A nrPDB 232 6e-62 4U5X-A nrPDB 230 2e-61 4MIT-A nrPDB 220 3e-58 2Q3H-A nrPDB 218 9e-58 2A5J-A nrPDB 214 2e-56 5SZI-A nrPDB 212 8e-56 3L0I-B nrPDB 212 9e-56 3CUE-F nrPDB 212 9e-56 4LHX-A nrPDB 212 1e-55 5SZH-B nrPDB 212 1e-55 2RHD-A nrPDB 212 1e-55 1YZN-A nrPDB 208 1e-54 6O62-A nrPDB 207 2e-54 1GWN-A nrPDB 207 4e-54 1Z0A-A nrPDB 207 4e-54 1M7B-A nrPDB 206 5e-54 4M8N-E nrPDB 206 6e-54 2WWX-A nrPDB 206 6e-54 4QXA-A nrPDB 205 8e-54 5SZJ-A nrPDB 205 8e-54 3CPH-A nrPDB 205 1e-53 1WMS-A nrPDB 205 1e-53 5LPN-A nrPDB 205 1e-53 2OCY-C nrPDB 204 3e-53 4RKE-A nrPDB 203 3e-53 6IF2-B nrPDB 203 4e-53 1X3S-A nrPDB 202 1e-52 5FBL-B nrPDB 202 1e-52 2OCB-A nrPDB 201 2e-52 1Z0F-A nrPDB 200 3e-52 1ZBD-A nrPDB 199 6e-52 2GF9-A nrPDB 199 9e-52 4DXA-A nrPDB 198 2e-51 4G01-B nrPDB 198 2e-51 4RKF-A nrPDB 197 2e-51 3RAB-A nrPDB 197 3e-51 2F9L-A nrPDB 197 4e-51 2HEI-A nrPDB 196 7e-51 4KLZ-A nrPDB 195 1e-50 2O52-A nrPDB 195 1e-50 5LDD-C nrPDB 195 1e-50 1TU4-A nrPDB 194 2e-50 4UJ4-A nrPDB 194 2e-50 3DZ8-A nrPDB 194 2e-50 2HUP-A nrPDB 194 2e-50 2F7S-A nrPDB 193 3e-50 3REG-A nrPDB 193 3e-50 2G6B-A nrPDB 193 4e-50 3CPJ-B nrPDB 193 5e-50 2FG5-A nrPDB 193 5e-50 2EW1-A nrPDB 193 6e-50 1EK0-A nrPDB 192 8e-50 2BMD-A nrPDB 192 9e-50 2IL1-A nrPDB 192 1e-49 5XR6-A nrPDB 192 1e-49 2REX-B nrPDB 191 2e-49 6HUF-A nrPDB 190 3e-49 5UB8-A nrPDB 190 3e-49 4PHF-A nrPDB 190 4e-49 3BC1-A nrPDB 190 4e-49 4KYI-B nrPDB 190 5e-49 2IEZ-A nrPDB 189 6e-49 2IEY-A nrPDB 188 1e-48 6IYB-A nrPDB 188 2e-48 1YVD-A nrPDB 187 3e-48 5CM8-B nrPDB 185 1e-47 3BFK-A nrPDB 185 1e-47 1Z06-A nrPDB 185 2e-47 3RWM-B nrPDB 185 2e-47 2G77-B nrPDB 185 2e-47 2FFQ-A nrPDB 184 2e-47 1YZU-A nrPDB 184 3e-47 5YOZ-A nrPDB 183 4e-47 1D5C-A nrPDB 183 4e-47 5LEF-A nrPDB 183 4e-47 3TSO-A nrPDB 183 5e-47 2KE5-A nrPDB 181 2e-46 3CON-A nrPDB 180 3e-46 2GIL-A nrPDB 180 3e-46 2P5S-A nrPDB 180 4e-46 2ERX-A nrPDB 180 5e-46 5HZH-A nrPDB 179 9e-46 2N1B-A nrPDB 178 1e-45 1ZC4-A nrPDB 178 1e-45 3WYF-A nrPDB 178 2e-45 4WA7-A nrPDB 177 2e-45 5XOJ-A nrPDB 177 3e-45 5WDQ-A nrPDB 175 1e-44 5UHV-A nrPDB 175 1e-44 4KU4-A nrPDB 175 2e-44 2ERY-A nrPDB 172 1e-43 5WDR-A nrPDB 171 1e-43 5UWI-A nrPDB 171 1e-43 5CLL-A nrPDB 171 1e-43 2ATV-A nrPDB 171 2e-43 4FMC-F nrPDB 171 2e-43 2FN4-A nrPDB 170 3e-43 1Z22-A nrPDB 170 4e-43 3T5G-A nrPDB 170 4e-43 3OES-A nrPDB 166 5e-42 3PIR-A nrPDB 166 5e-42 3CBQ-A nrPDB 161 2e-40 2CJW-A nrPDB 161 2e-40 4CZ2-A nrPDB 160 3e-40 2G3Y-A nrPDB 160 4e-40 2GF0-A nrPDB 158 2e-39 3RAP-R nrPDB 158 2e-39 6FF8-A nrPDB 157 3e-39 3Q72-A nrPDB 156 8e-39 4DJT-A nrPDB 155 1e-38 3Q85-A nrPDB 154 2e-38 5XC3-A nrPDB 150 6e-37 2NZJ-A nrPDB 150 6e-37 3E5H-A nrPDB 146 6e-36 3CLV-A nrPDB 145 1e-35 3C5C-A nrPDB 132 1e-31 5C1S-A nrPDB 128 1e-30 3IHW-A nrPDB 126 7e-30 6HLU-A nrPDB 116 5e-27 3DPU-A nrPDB 116 5e-27 2AL7-A nrPDB 114 2e-26 4ILE-A nrPDB 110 3e-25 4WNR-A nrPDB 107 3e-24 3D6T-B nrPDB 107 3e-24 4C0K-A nrPDB 92 1e-19 Sequences not found previously or not previously below threshold: 2IWR-A nrPDB 101 2e-22 2YC4-C nrPDB 87 5e-18 3LVQ-E nrPDB 86 1e-17 4YLG-A nrPDB 84 5e-17 2H16-A nrPDB 82 2e-16 2A5F-A nrPDB 81 3e-16 1YZG-A nrPDB 80 8e-16 6BBQ-A nrPDB 79 1e-15 1Z6X-A nrPDB 78 2e-15 3O47-A nrPDB 78 2e-15 5NZV-F nrPDB 78 3e-15 3LRP-A nrPDB 78 3e-15 2B6H-A nrPDB 76 1e-14 6FAE-B nrPDB 76 1e-14 5UF8-A nrPDB 75 2e-14 3AQ4-A nrPDB 75 3e-14 4ZI3-A nrPDB 75 3e-14 6DFF-C nrPDB 73 1e-13 5EE5-B nrPDB 73 1e-13 1J2J-A nrPDB 72 2e-13 3BH6-A nrPDB 71 2e-13 2H57-A nrPDB 70 9e-13 1MOZ-A nrPDB 68 2e-12 1KSG-A nrPDB 68 3e-12 4V0N-A nrPDB 65 2e-11 5DE3-A nrPDB 61 5e-10 2X77-A nrPDB 60 1e-09 4ARZ-A nrPDB 58 3e-09 2GJ9-A nrPDB 58 3e-09 6CES-A nrPDB 58 4e-09 2GAO-A nrPDB 57 4e-09 2YWH-A nrPDB 57 6e-09 3GEH-A nrPDB 56 1e-08 6GNI-B nrPDB 55 2e-08 1M2O-B nrPDB 55 2e-08 1XZP-A nrPDB 54 6e-08 1F6B-A nrPDB 53 7e-08 3J8G-X nrPDB 53 9e-08 5DI3-B nrPDB 52 1e-07 4M9Q-A nrPDB 52 2e-07 6G79-A nrPDB 52 2e-07 2LKD-A nrPDB 51 3e-07 5IMR-C nrPDB 51 3e-07 5J8B-z nrPDB 51 3e-07 4BAS-A nrPDB 51 4e-07 5KU1-A nrPDB 50 5e-07 5KSO-A nrPDB 50 5e-07 3T1O-A nrPDB 50 6e-07 6GDG-D nrPDB 50 8e-07 1WF3-A nrPDB 49 1e-06 6IAE-A nrPDB 49 1e-06 1MKY-A nrPDB 48 3e-06 5DN8-A nrPDB 48 4e-06 5YMX-A nrPDB 47 5e-06 3CB4-D nrPDB 47 7e-06 6D4G-A nrPDB 46 8e-06 2DYK-A nrPDB 45 2e-05 2E87-A nrPDB 45 3e-05 5LAD-A nrPDB 44 3e-05 5ZZM-A nrPDB 44 4e-05 4V7F-o nrPDB 44 4e-05 3PR1-A nrPDB 44 5e-05 3R9W-A nrPDB 44 5e-05 6GB2-BC nrPDB 44 6e-05 4KJZ-A nrPDB 43 9e-05 4B44-A nrPDB 43 9e-05 3V00-C nrPDB 43 1e-04 5KUT-A nrPDB 43 1e-04 3C5H-A nrPDB 43 1e-04 3EC1-A nrPDB 43 1e-04 3J4J-A nrPDB 43 1e-04 2GTP-A nrPDB 42 2e-04 2CXX-A nrPDB 42 2e-04 2QAG-A nrPDB 41 4e-04 3FTQ-A nrPDB 41 4e-04 3IZY-P nrPDB 41 4e-04 1SHZ-A nrPDB 41 5e-04 3JB9-B nrPDB 40 6e-04 3IEU-A nrPDB 40 7e-04 2ODE-A nrPDB 39 0.001 3T5D-A nrPDB 39 0.001 1LNZ-A nrPDB 39 0.001 4TN1-B nrPDB 39 0.002 5YT0-A nrPDB 39 0.002 1ZCB-A nrPDB 39 0.002 4NCL-A nrPDB 39 0.002 4N3G-A nrPDB 39 0.002 5FG3-A nrPDB 38 0.002 6OIK-A nrPDB 38 0.002 2QAG-C nrPDB 38 0.003 5CYO-A nrPDB 38 0.003 3GEE-A nrPDB 38 0.003 3H2Y-A nrPDB 38 0.004 3LLU-A nrPDB 37 0.005 2BCJ-Q nrPDB 37 0.005 4QJ3-A nrPDB 37 0.006 5KH0-A nrPDB 37 0.007 5IRR-A nrPDB 36 0.008 4V8Y-CP nrPDB 36 0.009 1TAG-A nrPDB 36 0.009 4NCF-A nrPDB 36 0.010 3WBI-A nrPDB 36 0.011 4V8Z-CV nrPDB 36 0.012 6OIJ-A nrPDB 36 0.014 6F1T-i nrPDB 35 0.022 6F1Y-j nrPDB 35 0.023 6D9H-A nrPDB 35 0.024 5NON-A nrPDB 35 0.026 4DCU-A nrPDB 35 0.026 2VNE-A nrPDB 35 0.026 2QTH-A nrPDB 35 0.026 6CES-C nrPDB 35 0.027 2Q3F-A nrPDB 35 0.027 1HEY-A nrPDB 35 0.027 4YMS-J nrPDB 34 0.038 1SUL-A nrPDB 34 0.044 3K53-A nrPDB 34 0.048 1G7S-A nrPDB 34 0.059 5VAI-A nrPDB 33 0.068 1PUJ-A nrPDB 33 0.087 4FID-A nrPDB 33 0.11 1ZCA-A nrPDB 33 0.11 4V89-AW nrPDB 33 0.12 1YE8-A nrPDB 33 0.13 6HZK-A nrPDB 33 0.13 4KV9-A nrPDB 33 0.13 5M04-A nrPDB 33 0.14 4U00-A nrPDB 33 0.14 4CSU-9 nrPDB 32 0.17 4KXX-A nrPDB 32 0.20 2QU8-A nrPDB 32 0.20 3DEF-A nrPDB 31 0.26 2YYZ-A nrPDB 31 0.27 1YR7-A nrPDB 31 0.27 3ZJC-A nrPDB 31 0.29 4Z54-A nrPDB 31 0.35 4WQY-BZ nrPDB 31 0.37 5MKK-A nrPDB 31 0.42 5IDV-A nrPDB 31 0.43 1U0L-A nrPDB 31 0.44 5C78-A nrPDB 31 0.47 1IQP-A nrPDB 31 0.47 1R6B-X nrPDB 31 0.49 6G12-A nrPDB 31 0.50 6D00-1 nrPDB 31 0.50 3A1W-A nrPDB 31 0.51 5X4B-A nrPDB 31 0.52 6QUZ-B nrPDB 30 0.56 2YV5-A nrPDB 30 0.56 6ED3-A nrPDB 30 0.59 3V70-A nrPDB 30 0.61 2WJG-A nrPDB 30 0.62 2GA8-A nrPDB 30 0.62 5ZLU-EE nrPDB 30 0.68 5B3F-A nrPDB 30 0.68 5AR1-A nrPDB 30 0.72 2PJZ-A nrPDB 30 0.76 4YPN-A nrPDB 30 0.78 4YPL-A nrPDB 30 0.78 3A1U-A nrPDB 30 0.78 2IYT-A nrPDB 30 0.78 4RY2-A nrPDB 30 0.78 4Q7L-A nrPDB 30 0.79 6HA8-V nrPDB 30 0.79 3B5X-A nrPDB 30 0.82 3GD7-A nrPDB 30 0.85 1QVR-A nrPDB 30 0.95 2NQL-A nrPDB 29 1.0 6G2G-A nrPDB 29 1.0 4AC9-A nrPDB 29 1.0 5OFO-C nrPDB 29 1.0 5NKM-B nrPDB 29 1.1 4CIU-A nrPDB 29 1.1 6FT6-s nrPDB 29 1.1 3J3U-A nrPDB 29 1.1 5H7J-A nrPDB 29 1.1 4YDS-A nrPDB 29 1.1 1JBK-A nrPDB 29 1.2 6EM8-A nrPDB 29 1.2 5MRE-WW nrPDB 29 1.2 2IW3-A nrPDB 29 1.2 5VHD-D nrPDB 29 1.2 4HSE-A nrPDB 29 1.3 6EMW-E nrPDB 29 1.3 5OCH-A nrPDB 29 1.3 3D0O-A nrPDB 29 1.3 6O81-S nrPDB 29 1.3 6FEC-S nrPDB 29 1.3 4MKI-B nrPDB 29 1.3 1NI3-A nrPDB 29 1.3 1IRQ-A nrPDB 29 1.3 3PXG-A nrPDB 29 1.3 5EE0-A nrPDB 29 1.3 1UDX-A nrPDB 29 1.3 3PXI-A nrPDB 29 1.4 2OHF-A nrPDB 29 1.4 3LLM-A nrPDB 29 1.4 4HZI-A nrPDB 29 1.4 3PV0-A nrPDB 29 1.4 5H7K-A nrPDB 29 1.5 2RGK-A nrPDB 29 1.5 2P8Y-T nrPDB 29 1.5 1ZE1-A nrPDB 29 1.5 3VX4-A nrPDB 29 1.5 3LXX-A nrPDB 29 1.5 3FVQ-A nrPDB 29 1.5 1H65-A nrPDB 29 1.5 6H7G-A nrPDB 29 1.5 6I3O-A nrPDB 29 1.6 5D4W-A nrPDB 29 1.6 4MYH-A nrPDB 29 1.6 2GZA-A nrPDB 29 1.6 1WXQ-A nrPDB 29 1.6 5GM6-Y nrPDB 29 1.7 2OUK-A nrPDB 29 1.7 4XGC-D nrPDB 29 1.7 1IM2-A nrPDB 29 1.8 1E94-E nrPDB 29 1.8 1M0T-A nrPDB 29 1.8 1OFI-A nrPDB 29 1.9 6BZR-B nrPDB 29 1.9 4MRS-A nrPDB 29 2.0 5LKM-A nrPDB 29 2.0 5L22-B nrPDB 29 2.0 1KAG-A nrPDB 29 2.0 2WJI-A nrPDB 29 2.1 1IHU-A nrPDB 29 2.1 5LF0-A nrPDB 29 2.1 4G1U-C nrPDB 29 2.1 4N1A-A nrPDB 28 2.2 6MFU-A nrPDB 28 2.3 5NIK-J nrPDB 28 2.4 4DBL-C nrPDB 28 2.4 2VP0-A nrPDB 28 2.4 5LJA-A nrPDB 28 2.4 4TLD-A nrPDB 28 2.4 2ZBL-A nrPDB 28 2.5 2PCL-A nrPDB 28 2.5 2P65-A nrPDB 28 2.5 5A9Z-CA nrPDB 28 2.7 3S1A-A nrPDB 28 2.7 6FA9-A nrPDB 28 2.7 4Z8X-A nrPDB 28 2.9 5GKO-A nrPDB 28 2.9 5OWV-A nrPDB 28 3.0 2XTP-A nrPDB 28 3.1 2BDT-A nrPDB 28 3.1 1ZVD-A nrPDB 28 3.1 5B57-C nrPDB 28 3.3 3MKR-B nrPDB 28 3.3 3EPJ-A nrPDB 28 3.4 2IT1-A nrPDB 28 3.4 1IY1-A nrPDB 28 3.4 5ZME-A nrPDB 28 3.5 5TV4-A nrPDB 28 3.6 2DHR-A nrPDB 28 3.6 1Z6G-A nrPDB 28 3.6 1EZ4-A nrPDB 28 3.6 5JSZ-B nrPDB 28 3.7 6QUZ-A nrPDB 28 3.7 5DO7-A nrPDB 28 4.0 5NP9-A nrPDB 28 4.0 4XIG-S nrPDB 28 4.0 3NHB-A nrPDB 28 4.1 5CDF-E nrPDB 28 4.2 6C2V-A nrPDB 28 4.3 3WMF-A nrPDB 28 4.4 4Q7K-A nrPDB 28 4.4 6FOC-D nrPDB 28 4.6 3WBG-A nrPDB 28 4.6 1S0U-A nrPDB 27 4.8 6FKI-F nrPDB 27 4.8 2W6I-D nrPDB 27 4.8 1LVG-A nrPDB 27 4.9 1JAL-A nrPDB 27 4.9 6CEP-A nrPDB 27 5.0 1WDT-A nrPDB 27 5.0 5EUM-A nrPDB 27 5.0 2XND-D nrPDB 27 5.4 4XD7-D nrPDB 27 5.4 3M6A-A nrPDB 27 5.5 6AQ1-A nrPDB 27 5.6 2FGK-A nrPDB 27 6.3 4O0M-A nrPDB 27 6.6 4F4J-A nrPDB 27 6.8 3N5F-A nrPDB 27 7.3 5JWO-A nrPDB 27 7.4 5TY0-A nrPDB 27 8.1 3PEN-A nrPDB 26 8.9 5ANB-A nrPDB 26 9.0 2KHQ-A nrPDB 26 9.1 1OXV-A nrPDB 26 9.2 2XTZ-A nrPDB 26 9.8 >2J1L-A nrPDB Length = 214 Score = 284 bits (726), Expect = 2e-77, Method: Composition-based stats. Identities = 190/191 (99%), Positives = 190/191 (99%) Query: 7 AGEEAPPGVRSVKVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMVNLQVKGKPVH 66 AGEEAPPGVRSVKVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMVNLQVKGKPVH Sbjct: 24 AGEEAPPGVRSVKVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMVNLQVKGKPVH 83 Query: 67 LHIWDTAGQDDYDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVNHFCKKVPIIV 126 LHIWDTAGQDDYDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVNHFCKKVPIIV Sbjct: 84 LHIWDTAGQDDYDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVNHFCKKVPIIV 143 Query: 127 VGCKTDLCKDKSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNVHAVFQEA 186 VGCKTDL KDKSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNVHAVFQEA Sbjct: 144 VGCKTDLRKDKSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNVHAVFQEA 203 Query: 187 AEVALSSRGRN 197 AEVALSSRGRN Sbjct: 204 AEVALSSRGRN 214 >5C2K-A nrPDB Length = 415 Score = 259 bits (661), Expect = 8e-70, Method: Composition-based stats. Identities = 96/189 (50%), Positives = 126/189 (66%), Gaps = 1/189 (0%) Query: 6 AAGEEAPPGVRSVKVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMVNLQVKGKPV 65 ++G +R K+V+VGDG CGKT LL+VF+ FPE Y PTVFE Y+ +++V GK V Sbjct: 2 SSGSSGMAAIRK-KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQV 60 Query: 66 HLHIWDTAGQDDYDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVNHFCKKVPII 125 L +WDTAGQ+DYDRLRPL YPD V+L+CF + SP+S +NI +W PEV HFC VPII Sbjct: 61 ELALWDTAGQEDYDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVKHFCPNVPII 120 Query: 126 VVGCKTDLCKDKSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNVHAVFQE 185 +VG K DL D+ +L + EPV G++MA +GA Y+ECSA+ D V VF+ Sbjct: 121 LVGNKKDLRNDEHTRRELAKMKQEPVKPEEGRDMANRIGAFGYMECSAKTKDGVREVFEM 180 Query: 186 AAEVALSSR 194 A AL +R Sbjct: 181 ATRAALQAR 189 >5JCP-B nrPDB Length = 419 Score = 257 bits (656), Expect = 4e-69, Method: Composition-based stats. Identities = 96/192 (50%), Positives = 125/192 (65%) Query: 2 TAAQAAGEEAPPGVRSVKVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMVNLQVK 61 TA+ + G E K+V+VGDG CGKT LL+V + FPE Y PTVFE Y+ +++V Sbjct: 228 TASNSPGIEGLSAAIRKKLVIVGDGACGKTCLLIVNSKDQFPEVYVPTVFENYVADIEVD 287 Query: 62 GKPVHLHIWDTAGQDDYDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVNHFCKK 121 GK V L +WDTAGQ+DYDRLRPL YPD V+L+CF + SP+S +NI +W PEV HFC Sbjct: 288 GKQVELALWDTAGQEDYDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVKHFCPN 347 Query: 122 VPIIVVGCKTDLCKDKSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNVHA 181 VPII+VG K DL D+ +L + EPV G++MA +GA Y+ECSA+ D V Sbjct: 348 VPIILVGNKKDLRNDEHTRRELAKMKQEPVKPEEGRDMANRIGAFGYMECSAKTKDGVRE 407 Query: 182 VFQEAAEVALSS 193 VF+ A AL + Sbjct: 408 VFEMATRAALQA 419 >5ZHX-e nrPDB Length = 198 Score = 254 bits (649), Expect = 2e-68, Method: Composition-based stats. Identities = 95/187 (50%), Positives = 122/187 (65%) Query: 8 GEEAPPGVRSVKVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMVNLQVKGKPVHL 67 G K+V+VGDG CGKT LL+VF+ FPE Y PTVFE Y+ +++V GK V L Sbjct: 1 GPLGSMAAIRKKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQVEL 60 Query: 68 HIWDTAGQDDYDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVNHFCKKVPIIVV 127 +WDTAGQ+DYDRLRPL YPD V+L+CF + SP+S +NI +W PEV HFC VPII+V Sbjct: 61 ALWDTAGQEDYDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVKHFCPNVPIILV 120 Query: 128 GCKTDLCKDKSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNVHAVFQEAA 187 G K DL D+ +L + EPV G++MA +GA Y+ECSA+ D V VF+ A Sbjct: 121 GNKKDLRNDEHTRRELAKMKQEPVKPEEGRDMANRIGAFGYMECSAKTKDGVREVFEMAT 180 Query: 188 EVALSSR 194 AL +R Sbjct: 181 RAALQAR 187 >3RYT-C nrPDB Length = 180 Score = 250 bits (639), Expect = 3e-67, Method: Composition-based stats. Identities = 92/179 (51%), Positives = 117/179 (65%) Query: 13 PGVRSVKVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMVNLQVKGKPVHLHIWDT 72 P ++++K V+VGDG GKT LL+ + AFP Y PTVF+ Y N+ V GKPV+L +WDT Sbjct: 2 PHMQAIKCVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDGKPVNLGLWDT 61 Query: 73 AGQDDYDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVNHFCKKVPIIVVGCKTD 132 AG +DYDRLRPL YP V L+CF + SP SF+N+ +WYPEV H C PII+VG K D Sbjct: 62 AGLEDYDRLRPLSYPQTDVFLICFSLVSPASFENVRAKWYPEVRHHCPNTPIILVGTKLD 121 Query: 133 LCKDKSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNVHAVFQEAAEVAL 191 L DK + KL+ L P+TY +G MA+ +GAV YLECSA + VF EA L Sbjct: 122 LRDDKDTIEKLKEKKLTPITYPQGLAMAKEIGAVKYLECSALTQRGLKTVFDEAIRAVL 180 >3TH5-A nrPDB Length = 204 Score = 248 bits (633), Expect = 1e-66, Method: Composition-based stats. Identities = 92/176 (52%), Positives = 116/176 (65%) Query: 16 RSVKVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMVNLQVKGKPVHLHIWDTAGQ 75 +++K V+VGDG GKT LL+ + AFP Y PTVF+ Y N+ V GKPV+L +WDTAGQ Sbjct: 29 QAIKCVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDGKPVNLGLWDTAGQ 88 Query: 76 DDYDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVNHFCKKVPIIVVGCKTDLCK 135 +DYDRLRPL YP V L+CF + SP SF+N+ +WYPEV H C PII+VG K DL Sbjct: 89 EDYDRLRPLSYPQTDVFLICFSLVSPASFENVRAKWYPEVRHHCPNTPIILVGTKLDLRD 148 Query: 136 DKSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNVHAVFQEAAEVAL 191 DK + KL+ L P+TY +G MA+ +GAV YLECSA + VF EA L Sbjct: 149 DKDTIEKLKEKKLTPITYPQGLAMAKEIGAVKYLECSALTQRGLKTVFDEAIRAVL 204 >3VHL-B nrPDB Length = 195 Score = 245 bits (625), Expect = 1e-65, Method: Composition-based stats. Identities = 84/194 (43%), Positives = 117/194 (60%) Query: 8 GEEAPPGVRSVKVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMVNLQVKGKPVHL 67 G G++++K V+VGDG GK LL+ + FP Y PTVF+ Y V + + G+P L Sbjct: 1 GSSGSSGMQTIKCVVVGDGAVGKNCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTL 60 Query: 68 HIWDTAGQDDYDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVNHFCKKVPIIVV 127 ++DTAGQ+DYDRLRPL YP V L+CF V SP+SF+N+ +W PE+ H C K P ++V Sbjct: 61 GLFDTAGQEDYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHCPKTPFLLV 120 Query: 128 GCKTDLCKDKSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNVHAVFQEAA 187 G + DL D S + KL +N +P+T +++AR + AV Y+ECSA + VF EA Sbjct: 121 GTQIDLRDDPSTIEKLAKNKQKPITPETAEKLARDLKAVKYVECSALTQKGLKNVFDEAI 180 Query: 188 EVALSSRGRNFWRR 201 AL RR Sbjct: 181 LAALEPPEPKKSRR 194 >2WKQ-A nrPDB Length = 332 Score = 242 bits (619), Expect = 7e-65, Method: Composition-based stats. Identities = 90/177 (50%), Positives = 112/177 (63%) Query: 18 VKVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMVNLQVKGKPVHLHIWDTAGQDD 77 +K V+VGDG GKT LL+ + AFP Y PTVF+ Y N+ V GKPV+L +WDTAG +D Sbjct: 156 IKCVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDGKPVNLGLWDTAGLED 215 Query: 78 YDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVNHFCKKVPIIVVGCKTDLCKDK 137 YDRLRPL YP V L+CF + SP SF ++ +WYPEV H C PII+VG K DL DK Sbjct: 216 YDRLRPLSYPQTDVFLICFSLVSPASFHHVRAKWYPEVRHHCPNTPIILVGTKLDLRDDK 275 Query: 138 SLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNVHAVFQEAAEVALSSR 194 + KL+ L P+TY +G MA+ +GAV YLECSA + VF EA L Sbjct: 276 DTIEKLKEKKLTPITYPQGLAMAKEIGAVKYLECSALTQRGLKTVFDEAIRAVLCPP 332 >2FV8-A nrPDB Length = 207 Score = 240 bits (614), Expect = 2e-64, Method: Composition-based stats. Identities = 94/176 (53%), Positives = 118/176 (67%) Query: 19 KVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMVNLQVKGKPVHLHIWDTAGQDDY 78 K+V+VGDG CGKT LL+VF+ FPE Y PTVFE Y+ +++V GK V L +WDTAGQ+DY Sbjct: 27 KLVVVGDGACGKTCLLIVFSKDEFPEVYVPTVFENYVADIEVDGKQVELALWDTAGQEDY 86 Query: 79 DRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVNHFCKKVPIIVVGCKTDLCKDKS 138 DRLRPL YPD V+L+CF V SP+S +NI +W PEV HFC VPII+V K DL D+ Sbjct: 87 DRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWVPEVKHFCPNVPIILVANKKDLRSDEH 146 Query: 139 LVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNVHAVFQEAAEVALSSR 194 + +L R EPV G+ MA + A YLECSA+ + V VF+ A AL R Sbjct: 147 VRTELARMKQEPVRTDDGRAMAVRIQAYDYLECSAKTKEGVREVFETATRAALQKR 202 >2W2X-A nrPDB Length = 185 Score = 240 bits (613), Expect = 3e-64, Method: Composition-based stats. Identities = 86/181 (47%), Positives = 114/181 (62%) Query: 11 APPGVRSVKVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMVNLQVKGKPVHLHIW 70 G +++K V+VGD GKT LL+ + AFP Y PTVF+ Y N+ V KPV+L +W Sbjct: 3 GSGGSQAIKCVVVGDVAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDSKPVNLGLW 62 Query: 71 DTAGQDDYDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVNHFCKKVPIIVVGCK 130 DTAGQ+DYDRLRPL YP V L+CF + SP S++N+ +W+PEV H C PII+VG K Sbjct: 63 DTAGQEDYDRLRPLSYPQTDVFLICFSLVSPASYENVRAKWFPEVRHHCPSTPIILVGTK 122 Query: 131 TDLCKDKSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNVHAVFQEAAEVA 190 DL DK + KL+ L P+TY +G +A+ + +V YLECSA + VF EA Sbjct: 123 LDLRDDKDTIEKLKEKKLAPITYPQGLALAKEIDSVKYLECSALTQRGLKTVFDEAIRAV 182 Query: 191 L 191 L Sbjct: 183 L 183 >2NTY-C nrPDB Length = 180 Score = 240 bits (613), Expect = 3e-64, Method: Composition-based stats. Identities = 77/182 (42%), Positives = 110/182 (60%), Gaps = 2/182 (1%) Query: 12 PPGVRSVKVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMVNLQVKGKPVHLHIWD 71 R +K V VGDG GKT +L+ + FP Y PTVF+ + N+ V G V+L +WD Sbjct: 1 MSASRFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGNTVNLGLWD 60 Query: 72 TAGQDDYDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVNHFCKKVPIIVVGCKT 131 TAGQ+DY+RLRPL Y A V +L F + S S++N+ +W PE+ H+ VPII+VG K Sbjct: 61 TAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVAKKWIPELRHYAPGVPIILVGTKL 120 Query: 132 DLCKDKSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNVHAVFQEAAEVAL 191 DL DK + G P+T ++G+E+ + +G+ Y+ECS++ NV AVF A +V L Sbjct: 121 DLRDDKQFF--IDHPGAVPITTNQGEELKKLIGSPIYIECSSKTQQNVKAVFDAAIKVVL 178 Query: 192 SS 193 Sbjct: 179 QP 180 >2WBL-C nrPDB Length = 180 Score = 240 bits (613), Expect = 4e-64, Method: Composition-based stats. Identities = 80/182 (43%), Positives = 109/182 (59%), Gaps = 2/182 (1%) Query: 12 PPGVRSVKVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMVNLQVKGKPVHLHIWD 71 R +K V VGDG GKT +L+ + FP Y PTVF+ + N+ V G V+L +WD Sbjct: 1 MSTARFIKCVTVGDGAVGKTCMLISYTGNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWD 60 Query: 72 TAGQDDYDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVNHFCKKVPIIVVGCKT 131 TAGQ+DY+RLRPL Y A V LL F + S S++NI +W PE+ H+ +PI++VG K Sbjct: 61 TAGQEDYNRLRPLSYRGADVFLLAFSLISKASYENIHKKWLPELKHYAPGIPIVLVGTKL 120 Query: 132 DLCKDKSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNVHAVFQEAAEVAL 191 DL DK + G +T +G+E+ + +GAV YLECS++ NV AVF A VAL Sbjct: 121 DLRDDKQFLKD--HPGAASITTAQGEELRKMIGAVRYLECSSKTQQNVKAVFDTAIRVAL 178 Query: 192 SS 193 Sbjct: 179 RP 180 >1RYH-A nrPDB Length = 203 Score = 240 bits (612), Expect = 4e-64, Method: Composition-based stats. Identities = 93/199 (46%), Positives = 118/199 (59%), Gaps = 19/199 (9%) Query: 15 VRSVKVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMVNLQVKGKPVHLHIWDTAG 74 ++++K V+VGDG GKT LL+ + AFP Y PTVF+ Y N+ V GKPV+L +WDTAG Sbjct: 3 MQAIKCVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDGKPVNLGLWDTAG 62 Query: 75 QDDYDRLRPLFYPD-------------------ASVLLLCFDVTSPNSFDNIFNRWYPEV 115 Q+DYDRLRPL YP A V L+CF + SP SF+N+ +WYPEV Sbjct: 63 QEDYDRLRPLSYPQTVGETYGKDITSRGKDKPIADVFLICFSLVSPASFENVRAKWYPEV 122 Query: 116 NHFCKKVPIIVVGCKTDLCKDKSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARL 175 H C PII+VG K DL DK + KL+ L P+TY +G MA+ +GAV YLECSA Sbjct: 123 RHHCPNTPIILVGTKLDLRDDKDTIEKLKEKKLTPITYPQGLAMAKEIGAVKYLECSALT 182 Query: 176 HDNVHAVFQEAAEVALSSR 194 + VF EA L Sbjct: 183 QRGLKTVFDEAIRAVLCPP 201 >3BWD-D nrPDB Length = 182 Score = 238 bits (608), Expect = 1e-63, Method: Composition-based stats. Identities = 78/182 (42%), Positives = 109/182 (59%), Gaps = 2/182 (1%) Query: 12 PPGVRSVKVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMVNLQVKGKPVHLHIWD 71 R +K V VGDG GKT LL+ + FP Y PTVF+ + N+ V G V+L +WD Sbjct: 3 MSASRFIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVNGATVNLGLWD 62 Query: 72 TAGQDDYDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVNHFCKKVPIIVVGCKT 131 TAGQ+DY+RLRPL Y A V +L F + S S++N+ +W PE+ H+ VPI++VG K Sbjct: 63 TAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGVPIVLVGTKL 122 Query: 132 DLCKDKSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNVHAVFQEAAEVAL 191 DL DK + G P+T +G+E+ + +GA AY+ECS++ +NV VF A V L Sbjct: 123 DLRDDKQFF--IDHPGAVPITTVQGEELKKLIGAPAYIECSSKSQENVKGVFDAAIRVVL 180 Query: 192 SS 193 Sbjct: 181 QP 182 >2J0V-A nrPDB Length = 212 Score = 237 bits (606), Expect = 2e-63, Method: Composition-based stats. Identities = 75/186 (40%), Positives = 108/186 (58%), Gaps = 4/186 (2%) Query: 12 PPGVRSVKVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMVNLQVKGKPVHLHIWD 71 + +K V VGDG GKT +L+ + FP Y PTVF+ + N+ V G+ V+L +WD Sbjct: 4 MSVSKFIKCVTVGDGAVGKTCMLICYTSNKFPTDYIPTVFDNFSANVAVDGQIVNLGLWD 63 Query: 72 TAGQDDYDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVNHFCKKVPIIVVGCKT 131 TAGQ+DY RLRPL Y A + +L F + S S++N+ +W PE+ F VPI++VG K Sbjct: 64 TAGQEDYSRLRPLSYRGADIFVLAFSLISKASYENVLKKWMPELRRFAPNVPIVLVGTKL 123 Query: 132 DLCKDKSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNVHAVFQEAAEVAL 191 DL DK + +T +G+E+ + +GA AY+ECS++ NV AVF A +V L Sbjct: 124 DLRDDKGYLAD----HTNVITSTQGEELRKQIGAAAYIECSSKTQQNVKAVFDTAIKVVL 179 Query: 192 SSRGRN 197 R Sbjct: 180 QPPRRK 185 >3A58-B nrPDB Length = 188 Score = 235 bits (601), Expect = 8e-63, Method: Composition-based stats. Identities = 90/177 (50%), Positives = 122/177 (68%) Query: 19 KVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMVNLQVKGKPVHLHIWDTAGQDDY 78 K+V+VGDG CGKT LL+V + G FPE Y PTVFE Y+ +++V G+ V L +WDTAGQ+DY Sbjct: 12 KLVIVGDGACGKTCLLIVNSKGQFPEVYVPTVFENYVADVEVDGRRVELALWDTAGQEDY 71 Query: 79 DRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVNHFCKKVPIIVVGCKTDLCKDKS 138 DRLRPL YPD++V+L+CF + P+S +N+ +W EV HFC+ VPII+VGCK DL D Sbjct: 72 DRLRPLSYPDSNVVLICFSIDLPDSLENVQEKWIAEVLHFCQGVPIILVGCKVDLRNDPQ 131 Query: 139 LVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNVHAVFQEAAEVALSSRG 195 + +LR+ G +PVT GQ +A +GA Y ECSA+ V VF+ A +L + Sbjct: 132 TIEQLRQEGQQPVTSQEGQSVADQIGATGYYECSAKTGYGVREVFEAATRASLMGKS 188 >5ZVP-A nrPDB Length = 181 Score = 235 bits (599), Expect = 1e-62, Method: Composition-based stats. Identities = 92/175 (52%), Positives = 125/175 (71%) Query: 19 KVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMVNLQVKGKPVHLHIWDTAGQDDY 78 K+V+VGDG CGKT LL+V + G FPE Y PTVFE Y+ +++V GK V L +WDTAGQ+DY Sbjct: 7 KLVIVGDGACGKTCLLIVNSKGTFPEVYVPTVFENYVADVEVDGKHVELALWDTAGQEDY 66 Query: 79 DRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVNHFCKKVPIIVVGCKTDLCKDKS 138 DRLRPL YPD+ V+L+CF + SP+S DN+ +W EV HFC+ +PII+VGCK DL D Sbjct: 67 DRLRPLSYPDSHVILICFAIDSPDSLDNVQEKWISEVLHFCQGLPIILVGCKKDLRHDPK 126 Query: 139 LVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNVHAVFQEAAEVALSS 193 + +L + +PVT +G+E+ + +GA YLECSAR ++ V VF+ A AL + Sbjct: 127 TIEELHKTSQKPVTPEQGEEVRKKIGAYKYLECSARTNEGVREVFEAATRAALLT 181 >2ATX-A nrPDB Length = 194 Score = 233 bits (594), Expect = 5e-62, Method: Composition-based stats. Identities = 80/181 (44%), Positives = 111/181 (61%) Query: 13 PGVRSVKVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMVNLQVKGKPVHLHIWDT 72 PG +K V+VGDG GKT LLM +A+ AFPE Y PTVF+ Y V++ V GK L ++DT Sbjct: 14 PGALMLKCVVVGDGAVGKTCLLMSYANDAFPEEYVPTVFDHYAVSVTVGGKQYLLGLYDT 73 Query: 73 AGQDDYDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVNHFCKKVPIIVVGCKTD 132 AGQ+DYDRLRPL YP V L+CF V +P SF N+ W PE+ + VP +++G + D Sbjct: 74 AGQEDYDRLRPLSYPMTDVFLICFSVVNPASFQNVKEEWVPELKEYAPNVPFLLIGTQID 133 Query: 133 LCKDKSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNVHAVFQEAAEVALS 192 L D + +L +P+ +GQ++A+ +GA Y+ECSA + VF EA L+ Sbjct: 134 LRDDPKTLARLNDMKEKPICVEQGQKLAKEIGACCYVECSALTQKGLKTVFDEAIIAILT 193 Query: 193 S 193 Sbjct: 194 P 194 >5VCU-A nrPDB Length = 208 Score = 232 bits (593), Expect = 6e-62, Method: Composition-based stats. Identities = 81/183 (44%), Positives = 118/183 (64%) Query: 15 VRSVKVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMVNLQVKGKPVHLHIWDTAG 74 + S+K V+VGDG GKT+LL+ ++ G FPE Y PTVF+ Y N+ V + ++DTAG Sbjct: 9 MESIKCVVVGDGAVGKTALLIAYSSGCFPEDYVPTVFDNYNKNIPYGDGIVSIALYDTAG 68 Query: 75 QDDYDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVNHFCKKVPIIVVGCKTDLC 134 Q+DYDRLRPL YPD V L+CF + +PNS +N ++W E+ H+ PI++VG K DL Sbjct: 69 QEDYDRLRPLSYPDTDVFLVCFSLENPNSLENCHSKWAEELKHYNPDTPIVLVGTKLDLK 128 Query: 135 KDKSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNVHAVFQEAAEVALSSR 194 KD+ V KL+ + PVT +GQEM + A Y+ECSA+ +N+ F A ++A+ R Sbjct: 129 KDEEYVKKLKEKKISPVTTEQGQEMKDKIKACGYIECSAKTMENLTEAFNMAIDIAMKQR 188 Query: 195 GRN 197 ++ Sbjct: 189 LKD 191 >4U5X-A nrPDB Length = 178 Score = 230 bits (588), Expect = 2e-61, Method: Composition-based stats. Identities = 73/177 (41%), Positives = 110/177 (62%), Gaps = 2/177 (1%) Query: 16 RSVKVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMVNLQVKGKPVHLHIWDTAGQ 75 R +K V VGDG GKT +L+ + FP Y PTVF+ + N+ V G V+L +WDTAG Sbjct: 4 RFIKCVTVGDGAVGKTCMLICYTSNKFPTDYIPTVFDNFSANVSVDGSVVNLGLWDTAGL 63 Query: 76 DDYDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVNHFCKKVPIIVVGCKTDLCK 135 +DY RLRPL Y A V +L F + S S++N+ +W PE+ F VP+++VG K DL + Sbjct: 64 EDYSRLRPLSYRGADVFILSFSLISRASYENVQKKWMPELRRFAPGVPVVLVGTKLDLRE 123 Query: 136 DKSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNVHAVFQEAAEVALS 192 D++ + + + +T +G+E+ + +GAVAY+ECS++ N+ AVF A +V L Sbjct: 124 DRAYLADHPASSI--ITTEQGEELRKLIGAVAYIECSSKTQRNIKAVFDTAIKVVLQ 178 >4MIT-A nrPDB Length = 186 Score = 220 bits (561), Expect = 3e-58, Method: Composition-based stats. Identities = 81/179 (45%), Positives = 118/179 (65%) Query: 15 VRSVKVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMVNLQVKGKPVHLHIWDTAG 74 S+K+V+VGDG GKT LL+ ++ FPE Y PTVF+ Y+V+L + + L +WDTAG Sbjct: 8 PTSIKLVVVGDGAVGKTCLLISYSIRKFPEDYIPTVFDNYVVSLTAGTRQIQLALWDTAG 67 Query: 75 QDDYDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVNHFCKKVPIIVVGCKTDLC 134 ++YD+LRPL Y AS+ L+CF VTS S+DN+ +W+PEV HF KVPII+VG K D Sbjct: 68 LEEYDQLRPLSYSSASIFLICFSVTSSVSYDNVITKWHPEVIHFAPKVPIILVGTKLDTR 127 Query: 135 KDKSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNVHAVFQEAAEVALSS 193 D ++V +L G+ + +G+E+ + AV Y+ECSA+ +N+ VF EA + L + Sbjct: 128 NDPAIVKRLTEQGMTVINTAKGEELKNRIKAVKYIECSAKTSENLKTVFDEAVKTVLMN 186 >2Q3H-A nrPDB Length = 201 Score = 218 bits (557), Expect = 9e-58, Method: Composition-based stats. Identities = 72/170 (42%), Positives = 105/170 (61%) Query: 18 VKVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMVNLQVKGKPVHLHIWDTAGQDD 77 VK VLVGDG GKTSL++ + +P Y PT F+ + + V G+PV L + DTAGQD+ Sbjct: 21 VKCVLVGDGAVGKTSLVVSYTTNGYPTEYIPTAFDNFSAVVSVDGRPVRLQLCDTAGQDE 80 Query: 78 YDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVNHFCKKVPIIVVGCKTDLCKDK 137 +D+LRPL Y + + LLCF V SP+SF N+ +W PE+ C K PII+VG ++DL +D Sbjct: 81 FDKLRPLCYTNTDIFLLCFSVVSPSSFQNVSEKWVPEIRCHCPKAPIILVGTQSDLREDV 140 Query: 138 SLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNVHAVFQEAA 187 ++ +L + +PV + +A + A +Y+ECSA N+ VF A Sbjct: 141 KVLIELDKCKEKPVPEEAAKLLAEEIKAASYIECSALTQKNLKEVFDAAI 190 >2A5J-A nrPDB Length = 191 Score = 214 bits (546), Expect = 2e-56, Method: Composition-based stats. Identities = 53/198 (26%), Positives = 90/198 (45%), Gaps = 22/198 (11%) Query: 10 EAPPGVRSVKVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMVN-LQVKGKPVHLH 68 P G K +++GD G GK+ LL+ F D F + T+ + + + GK + L Sbjct: 14 LVPRGSYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVNIDGKQIKLQ 73 Query: 69 IWDTAGQDDYDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVNHFCKKVPIIVVG 128 IWDTAGQ+ + + +Y A+ LL +D+T +F+++ + H + I+++G Sbjct: 74 IWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLTSWLEDARQHSSSNMVIMLIG 133 Query: 129 CKTDLCKDKSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNVHAVFQEAAE 188 K+DL + V G+ AR G + ++E SA+ NV F A Sbjct: 134 NKSDLESRRD------------VKREEGEAFAREHGLI-FMETSAKTACNVEEAFINTA- 179 Query: 189 VALSSRGRNFWRRITQGF 206 + +R+I QG Sbjct: 180 -------KEIYRKIQQGL 190 >5SZI-A nrPDB Length = 209 Score = 212 bits (540), Expect = 8e-56, Method: Composition-based stats. Identities = 55/200 (27%), Positives = 96/200 (48%), Gaps = 16/200 (8%) Query: 8 GEEAPPGVRSVKVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMV-NLQVKGKPVH 66 G A K++L+GD G GKT +L F++ AF ++ T+ + + +++ GK + Sbjct: 1 GHMAKTYDYLFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKRIK 60 Query: 67 LHIWDTAGQDDYDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVNHFCK-KVPII 125 L IWDTAGQ+ + + +Y A ++L +D+T+ SFDNI N W + V + Sbjct: 61 LQIWDTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIRN-WIRNIEEHASADVEKM 119 Query: 126 VVGCKTDLCKDKSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNVHAVFQE 185 ++G K D+ + V+ RG+++A G + ++E SA+ + NV F Sbjct: 120 ILGNKCDVNDKRQ------------VSKERGEKLALDYG-IKFMETSAKANINVENAFFT 166 Query: 186 AAEVALSSRGRNFWRRITQG 205 A + + QG Sbjct: 167 LARDIKAKMDKKLEGNSPQG 186 >3L0I-B nrPDB Length = 199 Score = 212 bits (540), Expect = 9e-56, Method: Composition-based stats. Identities = 59/189 (31%), Positives = 94/189 (49%), Gaps = 16/189 (8%) Query: 9 EEAPPGVRSVKVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMV-NLQVKGKPVHL 67 P K++L+GD G GK+ LL+ FAD + ESY T+ + + +++ GK + L Sbjct: 25 SMNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKL 84 Query: 68 HIWDTAGQDDYDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVNHFC-KKVPIIV 126 IWDTAGQ+ + + +Y A +++ +DVT SF+N+ +W E++ + + V ++ Sbjct: 85 QIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNV-KQWLQEIDRYASENVNKLL 143 Query: 127 VGCKTDLCKDKSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNVHAVFQEA 186 VG K DL K V Y +E A S+G + +LE SA+ NV F Sbjct: 144 VGNKCDLTTKK------------VVDYTTAKEFADSLG-IPFLETSAKNATNVEQSFMTM 190 Query: 187 AEVALSSRG 195 A G Sbjct: 191 AAEIKKRMG 199 >3CUE-F nrPDB Length = 206 Score = 212 bits (540), Expect = 9e-56, Method: Composition-based stats. Identities = 51/189 (26%), Positives = 87/189 (46%), Gaps = 16/189 (8%) Query: 18 VKVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYM-VNLQVKGKPVHLHIWDTAGQD 76 K++L+G+ G GK+ LL+ F+D + Y T+ + +++ GK V L IWDTAGQ+ Sbjct: 9 FKLLLIGNSGVGKSCLLLRFSDDTYTNDYISTIGVDFKIKTVELDGKTVKLQIWDTAGQE 68 Query: 77 DYDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVNHFCKKVPI-IVVGCKTDLCK 135 + + +Y + +++ +DVT SF+ + W E++ + + ++VG K DL Sbjct: 69 RFRTITSSYYRGSHGIIIVYDVTDQESFNGV-KMWLQEIDRYATSTVLKLLVGNKCDLKD 127 Query: 136 DKSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNVHAVFQEAAEVALSSRG 195 + V Y +E A + + +LE SA NV F A S Sbjct: 128 KR------------VVEYDVAKEFADA-NKMPFLETSALDSTNVEDAFLTMARQIKESMS 174 Query: 196 RNFWRRITQ 204 + TQ Sbjct: 175 QQNLNETTQ 183 >4LHX-A nrPDB Length = 186 Score = 212 bits (540), Expect = 1e-55, Method: Composition-based stats. Identities = 55/200 (27%), Positives = 96/200 (48%), Gaps = 16/200 (8%) Query: 8 GEEAPPGVRSVKVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMV-NLQVKGKPVH 66 G A K++L+GD G GKT +L F++ AF ++ T+ + + +++ GK + Sbjct: 1 GHMAKTYDYLFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKRIK 60 Query: 67 LHIWDTAGQDDYDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVNHFCK-KVPII 125 L IWDTAGQ+ + + +Y A ++L +D+T+ SFDNI N W + V + Sbjct: 61 LQIWDTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIRN-WIRNIEEHASADVEKM 119 Query: 126 VVGCKTDLCKDKSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNVHAVFQE 185 ++G K D+ + V+ RG+++A G + ++E SA+ + NV F Sbjct: 120 ILGNKCDVNDKRQ------------VSKERGEKLALDYG-IKFMETSAKANINVENAFFT 166 Query: 186 AAEVALSSRGRNFWRRITQG 205 A + + QG Sbjct: 167 LARDIKAKMDKKLEGNSPQG 186 >5SZH-B nrPDB Length = 203 Score = 212 bits (539), Expect = 1e-55, Method: Composition-based stats. Identities = 58/191 (30%), Positives = 94/191 (49%), Gaps = 16/191 (8%) Query: 8 GEEAPPGVRSVKVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMV-NLQVKGKPVH 66 G P K++L+GD G GK+ LL+ FAD + ESY T+ + + +++ GK + Sbjct: 1 GHMNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIK 60 Query: 67 LHIWDTAGQDDYDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVNHFC-KKVPII 125 L IWDTAGQ+ + + +Y A +++ +DVT S+ N+ +W E++ + + V + Sbjct: 61 LQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESYANV-KQWLQEIDRYASENVNKL 119 Query: 126 VVGCKTDLCKDKSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNVHAVFQE 185 +VG K+DL K V +E A S+G + +LE SA+ NV F Sbjct: 120 LVGNKSDLTTKK------------VVDNTTAKEFADSLG-IPFLETSAKNATNVEQAFMT 166 Query: 186 AAEVALSSRGR 196 A G Sbjct: 167 MAAEIKKRMGP 177 >2RHD-A nrPDB Length = 175 Score = 212 bits (539), Expect = 1e-55, Method: Composition-based stats. Identities = 56/178 (31%), Positives = 93/178 (52%), Gaps = 16/178 (8%) Query: 18 VKVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMV-NLQVKGKPVHLHIWDTAGQD 76 K++L+GD G GK+ LL+ FAD + +SY T+ + + + ++ K V L IWDTAGQ+ Sbjct: 10 FKLLLIGDSGVGKSCLLLRFADDTYTDSYISTIGVDFKIRTISLENKTVKLQIWDTAGQE 69 Query: 77 DYDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVNHFC-KKVPIIVVGCKTDLCK 135 + + +Y A +++ +DVT +SFDN+ +W E++ + + V ++VG K DL Sbjct: 70 RFRTITSSYYRGAHGIIIVYDVTDRDSFDNV-KQWIQEIDRYAMENVNKLLVGNKCDLVS 128 Query: 136 DKSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNVHAVFQEAAEVALSS 193 + VT G+E+A S G + ++E SA+ NV F A Sbjct: 129 KR------------VVTSDEGRELADSHG-IKFIETSAKNAYNVEQAFHTMAGEIKKR 173 >1YZN-A nrPDB Length = 185 Score = 208 bits (531), Expect = 1e-54, Method: Composition-based stats. Identities = 52/191 (27%), Positives = 87/191 (45%), Gaps = 19/191 (9%) Query: 8 GEEAPPGVRS---VKVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYM-VNLQVKGK 63 G P G K++L+G+ G GK+ LL+ F+D + Y T+ + +++ GK Sbjct: 9 GSLVPRGSEYDYLFKLLLIGNSGVGKSCLLLRFSDDTYTNDYISTIGVDFKIKTVELDGK 68 Query: 64 PVHLHIWDTAGQDDYDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVNHFCKKVP 123 V L IWDTAGQ+ + + +Y + +++ +DVT SF+ + W E++ + Sbjct: 69 TVKLQIWDTAGQERFRTITSSYYRGSHGIIIVYDVTDQESFNGV-KMWLQEIDRYATSTV 127 Query: 124 I-IVVGCKTDLCKDKSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNVHAV 182 + ++VG K DL + V Y +E A + + +LE SA NV Sbjct: 128 LKLLVGNKCDLKDKR------------VVEYDVAKEFADA-NKMPFLETSALDSTNVEDA 174 Query: 183 FQEAAEVALSS 193 F A S Sbjct: 175 FLTMARQIKES 185 >6O62-A nrPDB Length = 184 Score = 207 bits (528), Expect = 2e-54, Method: Composition-based stats. Identities = 56/187 (29%), Positives = 94/187 (50%), Gaps = 14/187 (7%) Query: 5 QAAGEEAPPGVRSVKVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMV-NLQVKGK 63 G + +K++LVGD G GK+ LL+ F + F S+ T+ + + ++ KGK Sbjct: 2 SGKGTSSRAYDMIMKLLLVGDSGVGKSCLLLRFVEDKFNPSFITTIGIDFKIRTIESKGK 61 Query: 64 PVHLHIWDTAGQDDYDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVNHFCKKVP 123 + L +WDTAGQ+ + + +Y A ++L +DVT SF+N+ N + H + Sbjct: 62 RIKLQVWDTAGQERFRTITTAYYRGAMGIVLIYDVTDSRSFENVENWFQTVTQHANEDAQ 121 Query: 124 IIVVGCKTDLCKDKSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNVHAVF 183 I +VG K D V+ +GQE+A + V +LE SA+ ++NV ++F Sbjct: 122 IFLVGNKCD------------DEVNRQVSKEQGQELAAKLN-VPFLEASAKSNENVDSIF 168 Query: 184 QEAAEVA 190 E A + Sbjct: 169 YELASII 175 >1GWN-A nrPDB Length = 205 Score = 207 bits (526), Expect = 4e-54, Method: Composition-based stats. Identities = 74/185 (40%), Positives = 112/185 (60%), Gaps = 1/185 (0%) Query: 10 EAPPGVRSVKVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMVNLQVKGKPVHLHI 69 P K+V+VGD CGKT+LL VFA FPE+Y PTVFE Y + ++ + + L + Sbjct: 21 MDPNQNVKCKIVVVGDSQCGKTALLHVFAKDCFPENYVPTVFENYTASFEIDTQRIELSL 80 Query: 70 WDTAGQDDYDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVNHFCKKVPIIVVGC 129 WDT+G YD +RPL YPD+ +L+CFD++ P + D++ +W E+ FC +++VGC Sbjct: 81 WDTSGSPYYDNVRPLSYPDSDAVLICFDISRPETLDSVLKKWKGEIQEFCPNTKMLLVGC 140 Query: 130 KTDLCKDKSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDN-VHAVFQEAAE 188 K+DL D S + +L + PV+Y +G MA+ +GA Y+ECSA +N V +F A Sbjct: 141 KSDLRTDVSTLVELSNHRQTPVSYDQGANMAKQIGAATYIECSALQSENSVRDIFHVATL 200 Query: 189 VALSS 193 ++ Sbjct: 201 ACVNK 205 >1Z0A-A nrPDB Length = 174 Score = 207 bits (526), Expect = 4e-54, Method: Composition-based stats. Identities = 48/184 (26%), Positives = 83/184 (45%), Gaps = 14/184 (7%) Query: 8 GEEAPPGVRSVKVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMVN-LQVKGKPVH 66 G K +++GD G GK+ LL+ F D F + T+ + + + GK + Sbjct: 1 GPLGSAYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIK 60 Query: 67 LHIWDTAGQDDYDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVNHFCKKVPIIV 126 L IWDTAGQ+ + + +Y A+ LL +D+T ++F+++ H + I++ Sbjct: 61 LQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLTTWLEDARQHSNSNMVIML 120 Query: 127 VGCKTDLCKDKSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNVHAVFQEA 186 +G K+DL + V G+ AR G + ++E SA+ NV F Sbjct: 121 IGNKSDLESRR------------EVKKEEGEAFAREHGLI-FMETSAKTASNVEEAFINT 167 Query: 187 AEVA 190 A+ Sbjct: 168 AKEI 171 >1M7B-A nrPDB Length = 184 Score = 206 bits (525), Expect = 5e-54, Method: Composition-based stats. Identities = 73/178 (41%), Positives = 111/178 (62%), Gaps = 1/178 (0%) Query: 17 SVKVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMVNLQVKGKPVHLHIWDTAGQD 76 K+V+VGD CGKT+LL VFA FPE+Y PTVFE Y + ++ + + L +WDT+G Sbjct: 7 KCKIVVVGDSQCGKTALLHVFAKDCFPENYVPTVFENYTASFEIDTQRIELSLWDTSGSP 66 Query: 77 DYDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVNHFCKKVPIIVVGCKTDLCKD 136 YD +RPL YPD+ +L+CFD++ P + D++ +W E+ FC +++VGCK+DL D Sbjct: 67 YYDNVRPLSYPDSDAVLICFDISRPETLDSVLKKWKGEIQEFCPNTKMLLVGCKSDLRTD 126 Query: 137 KSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDN-VHAVFQEAAEVALSS 193 S + +L + PV+Y +G MA+ +GA Y+ECSA +N V +F A ++ Sbjct: 127 VSTLVELSNHRQTPVSYDQGANMAKQIGAATYIECSALQSENSVRDIFHVATLACVNK 184 >4M8N-E nrPDB Length = 199 Score = 206 bits (525), Expect = 6e-54, Method: Composition-based stats. Identities = 52/179 (29%), Positives = 89/179 (49%), Gaps = 13/179 (7%) Query: 13 PGVRSVKVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMVNLQVKGKPVHLHIWDT 72 P +R K+V++G GG GK++L + F G F E Y PT+ + Y ++V + L I DT Sbjct: 2 PHMREYKLVVLGSGGVGKSALTVQFVQGIFVEKYDPTIEDSYRKQVEVDAQQCMLEILDT 61 Query: 73 AGQDDYDRLRPLFYPDASVLLLCFDVTSPNSFDNIFN-RWYPEVNHFCKKVPIIVVGCKT 131 AG + + +R L+ + L + +T+ ++F+++ + R VP+I+VG K Sbjct: 62 AGTEQFTAMRDLYMKNGQGFALVYSITAQSTFNDLQDLREQILRVKDTDDVPMILVGNKC 121 Query: 132 DLCKDKSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNVHAVFQEAAEVA 190 DL ++ V +GQ +AR A+LE SA+ NV+ +F + Sbjct: 122 DLEDER------------VVGKEQGQNLARQWNNCAFLESSAKSKINVNEIFYDLVRQI 168 >2WWX-A nrPDB Length = 175 Score = 206 bits (524), Expect = 6e-54, Method: Composition-based stats. Identities = 58/181 (32%), Positives = 93/181 (51%), Gaps = 16/181 (8%) Query: 18 VKVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMV-NLQVKGKPVHLHIWDTAGQD 76 K++L+GD G GK+ LL+ FAD + ESY T+ + + +++ GK + L IWDTAGQ+ Sbjct: 9 FKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQE 68 Query: 77 DYDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVNHFC-KKVPIIVVGCKTDLCK 135 + + +Y A +++ +DVT SF+N+ +W E++ + + V ++VG K DL Sbjct: 69 RFRTITSSYYRGAHGIIVVYDVTDQESFNNV-KQWLQEIDRYASENVNKLLVGIKCDLTT 127 Query: 136 DKSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNVHAVFQEAAEVALSSRG 195 K V Y +E A S+G + +LE SA+ NV F A G Sbjct: 128 KK------------VVDYTTAKEFADSLG-IPFLETSAKNATNVEQSFMTMAAEIKKRMG 174 Query: 196 R 196 Sbjct: 175 P 175 >4QXA-A nrPDB Length = 208 Score = 205 bits (523), Expect = 8e-54, Method: Composition-based stats. Identities = 56/186 (30%), Positives = 87/186 (46%), Gaps = 20/186 (10%) Query: 18 VKVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYM-VNLQVKGKPVHLHIWDTAGQD 76 K++L+GDGG GK+SL+ + F T+ ++ +L+V G V + IWDTAG + Sbjct: 9 FKIILLGDGGVGKSSLMNRYVTNKFDSQLFHTIGVEFLNKDLEVDGHFVTMQIWDTAGLE 68 Query: 77 DYDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVNHFC-----KKVPIIVVGCKT 131 + LR FY + LL F V SF N+ N W E ++ + P +++G KT Sbjct: 69 RFRSLRTPFYRGSDCCLLTFSVDDSQSFQNLSN-WKKEFIYYADVKEPESFPFVILGNKT 127 Query: 132 DLCKDKSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNVHAVFQEAAEVAL 191 D+ + V+ Q + G Y E SA+ NV A F+EA L Sbjct: 128 DIKE-------------RQVSTEEAQAWCKDNGDYPYFETSAKDSTNVAAAFEEAVRRIL 174 Query: 192 SSRGRN 197 ++ R+ Sbjct: 175 ATEDRS 180 >5SZJ-A nrPDB Length = 202 Score = 205 bits (523), Expect = 8e-54, Method: Composition-based stats. Identities = 52/178 (29%), Positives = 94/178 (52%), Gaps = 16/178 (8%) Query: 18 VKVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYM-VNLQVKGKPVHLHIWDTAGQD 76 K++L+GD G GKT +L F+D AF ++ T+ + ++++GK + L IWDTAGQ+ Sbjct: 12 FKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQIWDTAGQE 71 Query: 77 DYDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVN-HFCKKVPIIVVGCKTDLCK 135 + + +Y A ++L +D+T+ SF+NI +W ++ H + V +++G K D+ Sbjct: 72 RFHTITTSYYRGAMGIMLVYDITNGKSFENIS-KWLRNIDEHANEDVERMLLGNKCDMDD 130 Query: 136 DKSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNVHAVFQEAAEVALSS 193 + V +G+++AR G + + E SA+ + N+ F AE L Sbjct: 131 KR------------VVPKGKGEQIAREHG-IRFFETSAKANINIEKAFLTLAEDILRK 175 >3CPH-A nrPDB Length = 213 Score = 205 bits (523), Expect = 1e-53, Method: Composition-based stats. Identities = 52/189 (27%), Positives = 94/189 (49%), Gaps = 15/189 (7%) Query: 18 VKVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYM-VNLQVKGKPVHLHIWDTAGQD 76 +K++L+GD G GK+ LL+ F + F S+ T+ + + + GK V L +WDTAGQ+ Sbjct: 21 MKILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGKKVKLQLWDTAGQE 80 Query: 77 DYDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVNHFCKKVPIIVVGCKTDLCKD 136 + + +Y A ++L +DVT +F NI + H + +++VG K+D+ Sbjct: 81 RFRTITTAYYRGAMGIILVYDVTDERTFTNIKQWFKTVNEHANDEAQLLLVGNKSDME-- 138 Query: 137 KSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNVHAVFQEAAEVALSSRGR 196 VT +G+ +A+ +G + ++E SA+ DNV+ +F A++ Sbjct: 139 -----------TRVVTADQGEALAKELG-IPFIESSAKNDDNVNEIFFTLAKLIQEKIDS 186 Query: 197 NFWRRITQG 205 N + G Sbjct: 187 NKLVGVGNG 195 >1WMS-A nrPDB Length = 177 Score = 205 bits (522), Expect = 1e-53, Method: Composition-based stats. Identities = 57/184 (30%), Positives = 85/184 (46%), Gaps = 20/184 (10%) Query: 18 VKVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYM-VNLQVKGKPVHLHIWDTAGQD 76 KV+L+GDGG GK+SL+ + F T+ ++ +L+V G V + IWDTAGQ+ Sbjct: 8 FKVILLGDGGVGKSSLMNRYVTNKFDTQLFHTIGVEFLNKDLEVDGHFVTMQIWDTAGQE 67 Query: 77 DYDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVNHFC-----KKVPIIVVGCKT 131 + LR FY + LL F V SF N+ N W E ++ + P +++G K Sbjct: 68 RFRSLRTPFYRGSDCCLLTFSVDDSQSFQNLSN-WKKEFIYYADVKEPESFPFVILGNKI 126 Query: 132 DLCKDKSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNVHAVFQEAAEVAL 191 D+ + V+ Q R G Y E SA+ NV A F+EA L Sbjct: 127 DISE-------------RQVSTEEAQAWCRDNGDYPYFETSAKDATNVAAAFEEAVRRVL 173 Query: 192 SSRG 195 ++ Sbjct: 174 ATED 177 >5LPN-A nrPDB Length = 177 Score = 205 bits (522), Expect = 1e-53, Method: Composition-based stats. Identities = 52/178 (29%), Positives = 94/178 (52%), Gaps = 16/178 (8%) Query: 18 VKVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYM-VNLQVKGKPVHLHIWDTAGQD 76 K++L+GD G GKT +L F+D AF ++ T+ + ++++GK + L IWDTAGQ+ Sbjct: 12 FKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQIWDTAGQE 71 Query: 77 DYDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVN-HFCKKVPIIVVGCKTDLCK 135 + + +Y A ++L +D+T+ SF+NI +W ++ H + V +++G K D+ Sbjct: 72 RFHTITTSYYRGAMGIMLVYDITNGKSFENIS-KWLRNIDEHANEDVERMLLGNKCDMDD 130 Query: 136 DKSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNVHAVFQEAAEVALSS 193 + V +G+++AR G + + E SA+ + N+ F AE L Sbjct: 131 KR------------VVPKGKGEQIAREHG-IRFFETSAKANINIEKAFLTLAEDILRK 175 >2OCY-C nrPDB Length = 170 Score = 204 bits (519), Expect = 3e-53, Method: Composition-based stats. Identities = 51/181 (28%), Positives = 92/181 (50%), Gaps = 15/181 (8%) Query: 18 VKVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYM-VNLQVKGKPVHLHIWDTAGQD 76 +K++L+GD G GK+ LL+ F + F S+ T+ + + + GK V L +WDTAGQ+ Sbjct: 4 MKILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGKKVKLQLWDTAGQE 63 Query: 77 DYDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVNHFCKKVPIIVVGCKTDLCKD 136 + + +Y A ++L +DVT +F NI + H + +++VG K+D+ Sbjct: 64 RFRTITTAYYRGAMGIILVYDVTDERTFTNIKQWFKTVNEHANDEAQLLLVGNKSDME-- 121 Query: 137 KSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNVHAVFQEAAEVALSSRGR 196 VT +G+ +A+ +G + ++E SA+ DNV+ +F A++ Sbjct: 122 -----------TRVVTADQGEALAKELG-IPFIESSAKNDDNVNEIFFTLAKLIQEKIDS 169 Query: 197 N 197 N Sbjct: 170 N 170 >4RKE-A nrPDB Length = 176 Score = 203 bits (518), Expect = 3e-53, Method: Composition-based stats. Identities = 49/184 (26%), Positives = 81/184 (44%), Gaps = 14/184 (7%) Query: 8 GEEAPPGVRSVKVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMVN-LQVKGKPVH 66 G K +++GD G GK+ LL+ F D F + T+ + + + GK + Sbjct: 1 GAMGMSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIK 60 Query: 67 LHIWDTAGQDDYDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVNHFCKKVPIIV 126 L IWDTAG + + + +Y A+ LL +D+T +F+++ H + I++ Sbjct: 61 LQIWDTAGLEAFRSITRSYYRGAAGALLVYDITRRETFNHLTTWLEDARQHSNSNMVIML 120 Query: 127 VGCKTDLCKDKSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNVHAVFQEA 186 +G K+DL + V G+ AR G V ++E SAR NV F Sbjct: 121 IGNKSDLDSRR------------EVKKEEGEAFAREHGLV-FMETSARTAANVEEAFINT 167 Query: 187 AEVA 190 A+ Sbjct: 168 AKEI 171 >6IF2-B nrPDB Length = 186 Score = 203 bits (517), Expect = 4e-53, Method: Composition-based stats. Identities = 56/185 (30%), Positives = 92/185 (49%), Gaps = 15/185 (8%) Query: 18 VKVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMV-NLQVKGKPVHLHIWDTAGQD 76 K++++GD G GK+SLL+ FAD F SY T+ + + +++ G+ V L IWDTAG + Sbjct: 15 FKLLIIGDSGVGKSSLLLRFADNTFSGSYITTIGVDFKIRTVEINGEKVKLQIWDTAGLE 74 Query: 77 DYDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVNHFCKKVPIIVVGCKTDLCKD 136 + + +Y +++ +DVTS SF N+ RW E+N C V I+VG K D Sbjct: 75 RFRTITSTYYRGTHGVIVVYDVTSAESFVNV-KRWLHEINQNCDDVCRILVGNKND---- 129 Query: 137 KSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNVHAVFQEAAEVALSSRGR 196 + V + A +G + E SA+ + NV +F E+ L ++ Sbjct: 130 --------DPERKVVETEDAYKFAGQMG-IQLFETSAKENVNVEEMFNCITELVLRAKKD 180 Query: 197 NFWRR 201 N ++ Sbjct: 181 NLAKQ 185 >1X3S-A nrPDB Length = 195 Score = 202 bits (514), Expect = 1e-52, Method: Composition-based stats. Identities = 56/205 (27%), Positives = 92/205 (44%), Gaps = 25/205 (12%) Query: 8 GEEAPPGVRS-----VKVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYM-VNLQVK 61 G G+ +K++++G+ G GK+SLL+ F D F T+ + + V Sbjct: 1 GSSGSSGMDEDVLTTLKILIIGESGVGKSSLLLRFTDDTFDPELAATIGVDFKVKTISVD 60 Query: 62 GKPVHLHIWDTAGQDDYDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVNHFC-- 119 G L IWDTAGQ+ + L P +Y A ++L +DVT ++F + N W E+ +C Sbjct: 61 GNKAKLAIWDTAGQERFRTLTPSYYRGAQGVILVYDVTRRDTFVKLDN-WLNELETYCTR 119 Query: 120 KKVPIIVVGCKTDLCKDKSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNV 179 + ++VG K D V + G + AR ++ ++E SA+ D V Sbjct: 120 NDIVNMLVGNKIDKEN-------------REVDRNEGLKFARKH-SMLFIEASAKTCDGV 165 Query: 180 HAVFQEAAEVALSSRGRNFWRRITQ 204 F+E E + + G W Q Sbjct: 166 QCAFEELVEKIIQTPG--LWESENQ 188 >5FBL-B nrPDB Length = 221 Score = 202 bits (513), Expect = 1e-52, Method: Composition-based stats. Identities = 56/190 (29%), Positives = 82/190 (43%), Gaps = 19/190 (10%) Query: 6 AAGEEAPPGVRS---VKVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMVN-LQVK 61 A G KVVL+GD G GK++LL F F T+ + +QV Sbjct: 2 AMGSMGTRDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVD 61 Query: 62 GKPVHLHIWDTAGQDDYDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVN-HFCK 120 GK + IWDTAGQ+ Y + +Y A LL +D+ +++N+ RW E+ H Sbjct: 62 GKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENV-ERWLKELRDHADS 120 Query: 121 KVPIIVVGCKTDLCKDKSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNVH 180 + I++VG K+DL L V + A G ++++E SA NV Sbjct: 121 NIVIMLVGNKSDLRH------------LRAVPTDEARAFAEKNG-LSFIETSALDSTNVE 167 Query: 181 AVFQEAAEVA 190 A FQ Sbjct: 168 AAFQTILTEI 177 >2OCB-A nrPDB Length = 180 Score = 201 bits (512), Expect = 2e-52, Method: Composition-based stats. Identities = 60/185 (32%), Positives = 85/185 (45%), Gaps = 20/185 (10%) Query: 18 VKVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYM-VNLQVKGKPVHLHIWDTAGQD 76 +KV+L+GDGG GK+SL+ + F T+ ++ +L+V G+ V L IWDTAGQ+ Sbjct: 8 LKVILLGDGGVGKSSLMNRYVTNKFDSQAFHTIGVEFLNRDLEVDGRFVTLQIWDTAGQE 67 Query: 77 DYDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVNHFC-----KKVPIIVVGCKT 131 + LR FY A LL F V SF+N+ N W E ++ + P +V+G K Sbjct: 68 RFKSLRTPFYRGADCCLLTFSVDDRQSFENLGN-WQKEFIYYADVKDPEHFPFVVLGNKV 126 Query: 132 DLCKDKSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNVHAVFQEAAEVAL 191 D VT Q G YLE SA+ NV F+EA L Sbjct: 127 DKED-------------RQVTTEEAQTWCMENGDYPYLETSAKDDTNVTVAFEEAVRQVL 173 Query: 192 SSRGR 196 + + Sbjct: 174 AVEEQ 178 >1Z0F-A nrPDB Length = 179 Score = 200 bits (510), Expect = 3e-52, Method: Composition-based stats. Identities = 51/189 (26%), Positives = 88/189 (46%), Gaps = 16/189 (8%) Query: 8 GEEAPPGVRSV--KVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMVNL-QVKGKP 64 G P S K +++GD G GK+ LL F + F T+ + + +V G+ Sbjct: 4 GSATAPYNYSYIFKYIIIGDMGVGKSCLLHQFTEKKFMADCPHTIGVEFGTRIIEVSGQK 63 Query: 65 VHLHIWDTAGQDDYDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVNHFCKKVPI 124 + L IWDTAGQ+ + + +Y A+ L+ +D+T ++++++ + N I Sbjct: 64 IKLQIWDTAGQERFRAVTRSYYRGAAGALMVYDITRRSTYNHLSSWLTDARNLTNPNTVI 123 Query: 125 IVVGCKTDLCKDKSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNVHAVFQ 184 I++G K DL + VTY ++ A G + +LE SA+ +NV F Sbjct: 124 ILIGNKADLEAQRD------------VTYEEAKQFAEENG-LLFLEASAKTGENVEDAFL 170 Query: 185 EAAEVALSS 193 EAA+ + Sbjct: 171 EAAKKIYQN 179 >1ZBD-A nrPDB Length = 203 Score = 199 bits (507), Expect = 6e-52, Method: Composition-based stats. Identities = 46/183 (25%), Positives = 85/183 (46%), Gaps = 16/183 (8%) Query: 18 VKVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYM-VNLQVKGKPVHLHIWDTAGQD 76 K++++G+ GKTS L +AD +F ++ TV + + K + L IWDTAG + Sbjct: 9 FKILIIGNSSVGKTSFLFRYADDSFTPAFVSTVGIDFKVKTIYRNDKRIKLQIWDTAGLE 68 Query: 77 DYDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVNHFC-KKVPIIVVGCKTDLCK 135 Y + +Y A +L +D+T+ SF N W ++ + +++VG K D+ Sbjct: 69 RYRTITTAYYRGAMGFILMYDITNEESF-NAVQDWSTQIKTYSWDNAQVLLVGNKCDMED 127 Query: 136 DKSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNVHAVFQEAAEVALSSRG 195 ++ V+ RG+++A +G + E SA+ + NV F+ +V Sbjct: 128 ER------------VVSSERGRQLADHLG-FEFFEASAKDNINVKQTFERLVDVICEKMS 174 Query: 196 RNF 198 + Sbjct: 175 ESL 177 >2GF9-A nrPDB Length = 189 Score = 199 bits (506), Expect = 9e-52, Method: Composition-based stats. Identities = 52/184 (28%), Positives = 87/184 (47%), Gaps = 17/184 (9%) Query: 10 EAPPGVRSV-KVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMVNLQVK-GKPVHL 67 P G + K++L+G+ GKTS L +AD +F ++ TV + V + K + L Sbjct: 14 LVPRGSDYMFKLLLIGNSSVGKTSFLFRYADDSFTPAFVSTVGIDFKVKTVYRHDKRIKL 73 Query: 68 HIWDTAGQDDYDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVNHFC-KKVPIIV 126 IWDTAGQ+ Y + +Y A LL +D+ + SF + + W ++ + +I+ Sbjct: 74 QIWDTAGQERYRTITTAYYRGAMGFLLMYDIANQESFAAVQD-WATQIKTYSWDNAQVIL 132 Query: 127 VGCKTDLCKDKSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNVHAVFQEA 186 VG K DL ++ V G+ +A +G + E SA+ + NV VF+ Sbjct: 133 VGNKCDLEDER------------VVPAEDGRRLADDLG-FEFFEASAKENINVKQVFERL 179 Query: 187 AEVA 190 +V Sbjct: 180 VDVI 183 >4DXA-A nrPDB Length = 169 Score = 198 bits (503), Expect = 2e-51, Method: Composition-based stats. Identities = 50/177 (28%), Positives = 87/177 (49%), Gaps = 13/177 (7%) Query: 15 VRSVKVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMVNLQVKGKPVHLHIWDTAG 74 +R K+V++G G GK++L + F G F E Y PT+ + Y ++V + L I DTAG Sbjct: 3 MREYKLVVLGSVGVGKSALTVQFVQGIFVEKYDPTIEDSYRKQVEVDAQQCMLEILDTAG 62 Query: 75 QDDYDRLRPLFYPDASVLLLCFDVTSPNSFDNIFN-RWYPEVNHFCKKVPIIVVGCKTDL 133 + + +R L+ + L + +T+ ++F+++ + R VP+I+VG K DL Sbjct: 63 TEQFTAMRDLYMKNGQGFALVYSITAQSTFNDLQDLREQILRVKDTDDVPMILVGNKCDL 122 Query: 134 CKDKSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNVHAVFQEAAEVA 190 ++ V +GQ +AR A+LE SA+ NV+ +F + Sbjct: 123 EDER------------VVGKEQGQNLARQWNNCAFLESSAKSKINVNEIFYDLVRQI 167 >4G01-B nrPDB Length = 181 Score = 198 bits (503), Expect = 2e-51, Method: Composition-based stats. Identities = 58/185 (31%), Positives = 88/185 (47%), Gaps = 18/185 (9%) Query: 8 GEEAPPGVRSV--KVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFE-RYMVNLQVKGKP 64 G A G +S+ K+VL+GD G GK+SL++ F F E T+ + L V Sbjct: 1 GSMAAAGNKSINAKLVLLGDVGAGKSSLVLRFVKDQFVEFQESTIGAAFFSQTLAVNDAT 60 Query: 65 VHLHIWDTAGQDDYDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVNHFC-KKVP 123 V IWDTAGQ+ Y L P++Y A+ ++ FDVT+ SF+ +W E+ + Sbjct: 61 VKFEIWDTAGQERYHSLAPMYYRGAAAAIIVFDVTNQASFERA-KKWVQELQAQGNPNMV 119 Query: 124 IIVVGCKTDLCKDKSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNVHAVF 183 + + G K+DL + VT Q A+ G + ++E SA+ NV +F Sbjct: 120 MALAGNKSDLLDARK------------VTAEDAQTYAQENG-LFFMETSAKTATNVKEIF 166 Query: 184 QEAAE 188 E A Sbjct: 167 YEIAR 171 >4RKF-A nrPDB Length = 190 Score = 197 bits (502), Expect = 2e-51, Method: Composition-based stats. Identities = 50/175 (28%), Positives = 92/175 (52%), Gaps = 16/175 (9%) Query: 18 VKVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMVNLQVK-GKPVHLHIWDTAGQD 76 K++++G+ GKTS L +AD +F ++ TV + V + K V L IWDTAG + Sbjct: 24 FKLLIIGNSSVGKTSFLFRYADDSFTSAFVSTVGIDFKVKTVFRHDKRVKLQIWDTAGLE 83 Query: 77 DYDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVNHFC-KKVPIIVVGCKTDLCK 135 Y + +Y A +L +DVT+ +SF+++ + W ++ + +I+VG K D+ Sbjct: 84 RYRTITTAYYRGAMGFILMYDVTNEDSFNSVQD-WVTQIKTYSWDNAQVILVGNKCDMED 142 Query: 136 DKSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNVHAVFQEAAEVA 190 + +++ RG+++A +G V + E SA+ + NV AVF+ ++ Sbjct: 143 QR------------VISFERGRQLADQLG-VEFFETSAKENVNVKAVFERLVDII 184 >3RAB-A nrPDB Length = 169 Score = 197 bits (501), Expect = 3e-51, Method: Composition-based stats. Identities = 47/175 (26%), Positives = 85/175 (48%), Gaps = 16/175 (9%) Query: 18 VKVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYM-VNLQVKGKPVHLHIWDTAGQD 76 K++++G+ GKTS L +AD +F ++ TV + + K + L IWDTAGQ+ Sbjct: 6 FKILIIGNSSVGKTSFLFRYADDSFTPAFVSTVGIDFKVKTIYRNDKRIKLQIWDTAGQE 65 Query: 77 DYDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVNHFC-KKVPIIVVGCKTDLCK 135 Y + +Y A +L +D+T+ SF N W ++ + +++VG K D+ Sbjct: 66 RYRTITTAYYRGAMGFILMYDITNEESF-NAVQDWSTQIKTYSWDNAQVLLVGNKCDMED 124 Query: 136 DKSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNVHAVFQEAAEVA 190 ++ V+ RG+++A +G + E SA+ + NV F+ +V Sbjct: 125 ER------------VVSSERGRQLADHLG-FEFFEASAKDNINVKQTFERLVDVI 166 >2F9L-A nrPDB Length = 199 Score = 197 bits (500), Expect = 4e-51, Method: Composition-based stats. Identities = 52/175 (29%), Positives = 79/175 (45%), Gaps = 16/175 (9%) Query: 18 VKVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMVN-LQVKGKPVHLHIWDTAGQD 76 KVVL+GD G GK++LL F F T+ + +QV GK + IWDTAGQ+ Sbjct: 6 FKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQE 65 Query: 77 DYDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVN-HFCKKVPIIVVGCKTDLCK 135 Y R+ +Y A LL +D+ +++N+ RW E+ H + I++VG K+DL Sbjct: 66 RYRRITSAYYRGAVGALLVYDIAKHLTYENV-ERWLKELRDHADSNIVIMLVGNKSDLRH 124 Query: 136 DKSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNVHAVFQEAAEVA 190 L V + A ++++E SA NV F+ Sbjct: 125 ------------LRAVPTDEARAFAEKNN-LSFIETSALDSTNVEEAFKNILTEI 166 >2HEI-A nrPDB Length = 179 Score = 196 bits (498), Expect = 7e-51, Method: Composition-based stats. Identities = 49/184 (26%), Positives = 82/184 (44%), Gaps = 16/184 (8%) Query: 17 SVKVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMVN-LQVKGKPVHLHIWDTAGQ 75 K+VL+G+ GK+SL++ F G F E T+ ++ + + V IWDTAGQ Sbjct: 8 QFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQSVCLDDTTVKFEIWDTAGQ 67 Query: 76 DDYDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVNHFC-KKVPIIVVGCKTDLC 134 + Y L P++Y A ++ +D+T+ +F W E+ + I + G K DL Sbjct: 68 ERYHSLAPMYYRGAQAAIVVYDITNQETFARA-KTWVKELQRQASPSIVIALAGNKADLA 126 Query: 135 KDKSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNVHAVFQEAAEVALSSR 194 + V Y Q A ++ ++E SA+ NV+ +F A+ S Sbjct: 127 NKR------------MVEYEEAQAYADD-NSLLFMETSAKTAMNVNDLFLAIAKKLPKSE 173 Query: 195 GRNF 198 +N Sbjct: 174 PQNL 177 >4KLZ-A nrPDB Length = 173 Score = 195 bits (496), Expect = 1e-50, Method: Composition-based stats. Identities = 46/183 (25%), Positives = 80/183 (43%), Gaps = 14/183 (7%) Query: 15 VRSVKVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMVNLQVKGKPVHLHIWDTAG 74 R K+V++G GG GK+++ M F FPE + PT+ + Y + +++ +P +L I DTAG Sbjct: 3 SREYKLVMLGAGGVGKSAMTMQFISHRFPEDHDPTIEDAYKIRIRIDDEPANLDILDTAG 62 Query: 75 QDDYDRLRPLFYPDASVLLLCFDVTSPNSFDNIFN-RWYPEVNHFCKKVPIIVVGCKTDL 133 Q ++ +R + ++C+ +T SF + + P+++VG K+DL Sbjct: 63 QAEFTAMRDQYMRAGEGFIICYSITDRRSFHEVREFKQLIYRVRRTDDTPVVLVGNKSDL 122 Query: 134 CKDKSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNVHAVFQEAAEVALSS 193 + L VT G +AR + + E SA + VF Sbjct: 123 KQ------------LRQVTKEEGLALAREF-SCPFFETSAAYRYYIDDVFHALVREIRRK 169 Query: 194 RGR 196 Sbjct: 170 EKE 172 >2O52-A nrPDB Length = 200 Score = 195 bits (495), Expect = 1e-50, Method: Composition-based stats. Identities = 46/177 (25%), Positives = 79/177 (44%), Gaps = 14/177 (7%) Query: 18 VKVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMVNLQ-VKGKPVHLHIWDTAGQD 76 K +++G G GK+ LL F + F + T+ + + V GK V L IWDTAGQ+ Sbjct: 26 FKFLVIGSAGTGKSCLLHQFIENKFKQDSNHTIGVEFGSRVVNVGGKTVKLQIWDTAGQE 85 Query: 77 DYDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVNHFCKKVPIIVVGCKTDLCKD 136 + + +Y A+ LL +D+TS +++++ + +I+ G K DL + Sbjct: 86 RFRSVTRSYYRGAAGALLVYDITSRETYNSLAAWLTDARTLASPNIVVILCGNKKDLDPE 145 Query: 137 KSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNVHAVFQEAAEVALSS 193 + VT+ A+ + +LE SA +NV F + A L+ Sbjct: 146 R------------EVTFLEASRFAQE-NELMFLETSALTGENVEEAFLKCARTILNK 189 >5LDD-C nrPDB Length = 207 Score = 195 bits (495), Expect = 1e-50, Method: Composition-based stats. Identities = 57/196 (29%), Positives = 88/196 (44%), Gaps = 18/196 (9%) Query: 8 GEEAPPGVRSVKVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMVN-LQVKGKPVH 66 G + +KV+++GD G GKTSL+ + + F SY T+ ++ + V + V Sbjct: 1 GSMSSRKKVLLKVIILGDSGVGKTSLMNQYVNKKFSASYKATIGADFLTREVMVDDRQVT 60 Query: 67 LHIWDTAGQDDYDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEV-----NHFCKK 121 + +WDTAGQ+ + L FY A +L FDV + SFD + + W E + Sbjct: 61 MQLWDTAGQERFQSLGVAFYRGADCCVLVFDVNNAKSFDAL-DSWRDEFLIQASPRDPEN 119 Query: 122 VPIIVVGCKTDLCKDKSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNVHA 181 P +V+G K D+ + K ++ R Q +S G + Y E SA+ NV Sbjct: 120 FPFVVLGIKIDVEESK-----------RVISTKRAQTFCQSKGGIPYFETSAKEAINVEE 168 Query: 182 VFQEAAEVALSSRGRN 197 FQ A AL Sbjct: 169 AFQVIARNALMQEESE 184 >1TU4-A nrPDB Length = 171 Score = 194 bits (494), Expect = 2e-50, Method: Composition-based stats. Identities = 48/176 (27%), Positives = 80/176 (45%), Gaps = 16/176 (9%) Query: 17 SVKVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMV-NLQVKGKPVHLHIWDTAGQ 75 K+VL+G+ GK+SL++ F G F E T+ ++ + + V IWDTAGQ Sbjct: 7 QFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQ 66 Query: 76 DDYDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVNHFC-KKVPIIVVGCKTDLC 134 + Y L P++Y A ++ +D+T+ SF N W E+ + I + G K DL Sbjct: 67 ERYHSLAPMYYRGAQAAIVVYDITNEESFARAKN-WVKELQRQASPNIVIALSGNKADLA 125 Query: 135 KDKSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNVHAVFQEAAEVA 190 + V + Q A ++ ++E SA+ NV+ +F A+ Sbjct: 126 NKR------------AVDFQEAQSYADD-NSLLFMETSAKTSMNVNEIFMAIAKKL 168 >4UJ4-A nrPDB Length = 185 Score = 194 bits (494), Expect = 2e-50, Method: Composition-based stats. Identities = 53/175 (30%), Positives = 79/175 (45%), Gaps = 16/175 (9%) Query: 18 VKVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMVN-LQVKGKPVHLHIWDTAGQD 76 KVVL+GD G GK++LL F F T+ + +QV GK + IWDTAG + Sbjct: 11 FKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGLE 70 Query: 77 DYDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVN-HFCKKVPIIVVGCKTDLCK 135 Y + +Y A LL +D+ +++N+ RW E+ H + I++VG K+DL Sbjct: 71 RYRAITSAYYRGAVGALLVYDIAKHLTYENV-ERWLKELRDHADSNIVIMLVGNKSDLRH 129 Query: 136 DKSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNVHAVFQEAAEVA 190 L V + A G ++++E SA NV A FQ Sbjct: 130 ------------LRAVPTDEARAFAEKNG-LSFIETSALDSTNVEAAFQTILTEI 171 >3DZ8-A nrPDB Length = 191 Score = 194 bits (493), Expect = 2e-50, Method: Composition-based stats. Identities = 48/182 (26%), Positives = 84/182 (46%), Gaps = 16/182 (8%) Query: 18 VKVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMVNLQVKG-KPVHLHIWDTAGQD 76 K++++G+ GKTS L +AD F ++ TV + V + K V L IWDTAGQ+ Sbjct: 24 FKLLIIGNSSVGKTSFLFRYADDTFTPAFVSTVGIDFKVKTVYRHEKRVKLQIWDTAGQE 83 Query: 77 DYDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVNHFC-KKVPIIVVGCKTDLCK 135 Y + +Y A +L +D+T+ SF N W ++ + +I+VG K D+ + Sbjct: 84 RYRTITTAYYRGAMGFILMYDITNEESF-NAVQDWATQIKTYSWDNAQVILVGNKCDMEE 142 Query: 136 DKSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNVHAVFQEAAEVALSSRG 195 ++ V +GQ +A +G + E SA+ + +V F+ + Sbjct: 143 ER------------VVPTEKGQLLAEQLG-FDFFEASAKENISVRQAFERLVDAICDKMS 189 Query: 196 RN 197 + Sbjct: 190 DS 191 >2HUP-A nrPDB Length = 201 Score = 194 bits (493), Expect = 2e-50, Method: Composition-based stats. Identities = 54/194 (27%), Positives = 91/194 (46%), Gaps = 15/194 (7%) Query: 4 AQAAGEEAPPGVRSVKVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERY-MVNLQVKG 62 + +G+ K+VLVGD GKT ++ F GAF E T+ + M L+++G Sbjct: 16 PRGSGDPDEQYDFLFKLVLVGDASVGKTCVVQRFKTGAFSERQGSTIGVDFTMKTLEIQG 75 Query: 63 KPVHLHIWDTAGQDDYDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVNHFC-KK 121 K V L IWDTAGQ+ + + +Y A+ +L +D+T +SF ++ + W +V + Sbjct: 76 KRVKLQIWDTAGQERFRTITQSYYRSANGAILAYDITKRSSFLSVPH-WIEDVRKYAGSN 134 Query: 122 VPIIVVGCKTDLCKDKSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNVHA 181 + +++G K+DL + L V+ Q +A + +E SA+ NV Sbjct: 135 IVQLLIGNKSDLSE------------LREVSLAEAQSLAEHYDILCAIETSAKDSSNVEE 182 Query: 182 VFQEAAEVALSSRG 195 F A + G Sbjct: 183 AFLRVATELIMRHG 196 >2F7S-A nrPDB Length = 217 Score = 193 bits (492), Expect = 3e-50, Method: Composition-based stats. Identities = 53/192 (27%), Positives = 84/192 (43%), Gaps = 27/192 (14%) Query: 18 VKVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMVNLQVKGKP-----------VH 66 +K++ +GD G GKT+ L + D F + TV + V VH Sbjct: 26 IKLLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYNAQGPNGSSGKAFKVH 85 Query: 67 LHIWDTAGQDDYDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVN--HFCKKVPI 124 L +WDTAGQ+ + L F+ DA LL FD+TS SF N+ N W ++ +C+ I Sbjct: 86 LQLWDTAGQERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVRN-WMSQLQANAYCENPDI 144 Query: 125 IVVGCKTDLCKDKSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNVHAVFQ 184 +++G K DL + V + +E+A G + Y E SA NV + Sbjct: 145 VLIGNKADLPDQR------------EVNERQARELADKYG-IPYFETSAATGQNVEKAVE 191 Query: 185 EAAEVALSSRGR 196 ++ + + Sbjct: 192 TLLDLIMKRMEQ 203 >3REG-A nrPDB Length = 194 Score = 193 bits (492), Expect = 3e-50, Method: Composition-based stats. Identities = 74/181 (40%), Positives = 112/181 (61%), Gaps = 10/181 (5%) Query: 14 GVRSVKVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMVNLQVKGKPVHLHIWDTA 73 G +++K+V+VGDG GKT LL+ F+ G P +Y PTVFE + ++ K + LH+WDTA Sbjct: 20 GKKALKIVVVGDGAVGKTCLLLAFSKGEIPTAYVPTVFENFSHVMKYKNEEFILHLWDTA 79 Query: 74 GQDDYDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVNHFCKKVPIIVVGCKTDL 133 GQ++YDRLRPL Y D+ V+LLCF V + SFDNI +W PE+ H+ ++VG K DL Sbjct: 80 GQEEYDRLRPLSYADSDVVLLCFAVNNRTSFDNISTKWEPEIKHYIDTAKTVLVGLKVDL 139 Query: 134 CKDKSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNVHAVFQEAAEVALSS 193 KD G + VT G ++ + +G VAY+E S+ ++ VF+++ + S+ Sbjct: 140 RKD----------GSDDVTKQEGDDLCQKLGCVAYIEASSVAKIGLNEVFEKSVDCIFSN 189 Query: 194 R 194 + Sbjct: 190 K 190 >2G6B-A nrPDB Length = 180 Score = 193 bits (492), Expect = 4e-50, Method: Composition-based stats. Identities = 61/183 (33%), Positives = 94/183 (51%), Gaps = 17/183 (9%) Query: 17 SVKVVLVGDGGCGKTSLLMVFADGAF-PESYTPTVFERYM-VNLQVKGKPVHLHIWDTAG 74 + KV+LVGD G GKT LL+ F DGAF ++ TV + L V G V L +WDTAG Sbjct: 10 AFKVMLVGDSGVGKTCLLVRFKDGAFLAGTFISTVGIDFRNKVLDVDGVKVKLQMWDTAG 69 Query: 75 QDDYDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVNHFCK-KVPIIVVGCKTDL 133 Q+ + + +Y DA LLL +DVT+ SFDNI W E++ + + V ++++G K D Sbjct: 70 QERFRSVTHAYYRDAHALLLLYDVTNKASFDNI-QAWLTEIHEYAQHDVALMLLGNKVDS 128 Query: 134 CKDKSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNVHAVFQEAAEVALSS 193 ++ V G+++A+ G + ++E SA+ NV F A+ Sbjct: 129 AHER------------VVKREDGEKLAKEYG-LPFMETSAKTGLNVDLAFTAIAKELKRR 175 Query: 194 RGR 196 + Sbjct: 176 SMK 178 >3CPJ-B nrPDB Length = 223 Score = 193 bits (491), Expect = 5e-50, Method: Composition-based stats. Identities = 48/181 (26%), Positives = 80/181 (44%), Gaps = 16/181 (8%) Query: 18 VKVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERY-MVNLQVKGKPVHLHIWDTAGQD 76 K+VL+GD G GK++LL F F T+ + L+++GK + IWDTAGQ+ Sbjct: 14 FKIVLIGDSGVGKSNLLSRFTKNEFNMDSKSTIGVEFATRTLEIEGKRIKAQIWDTAGQE 73 Query: 77 DYDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVNHFC-KKVPIIVVGCKTDLCK 135 Y + +Y A L+ +D++ +S++N N W E+ V + ++G K+DL Sbjct: 74 RYRAITSAYYRGAVGALIVYDISKSSSYENC-NHWLSELRENADDNVAVGLIGNKSDLAH 132 Query: 136 DKSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNVHAVFQEAAEVALSSRG 195 L V + A+ + + E SA +NV F+E Sbjct: 133 ------------LRAVPTEESKTFAQE-NQLLFTETSALNSENVDKAFEELINTIYQKVS 179 Query: 196 R 196 + Sbjct: 180 K 180 >2FG5-A nrPDB Length = 192 Score = 193 bits (490), Expect = 5e-50, Method: Composition-based stats. Identities = 52/185 (28%), Positives = 89/185 (48%), Gaps = 18/185 (9%) Query: 10 EAPPGV--RSVKVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMVNLQVKGKPVH- 66 P G R +KV L+GD G GK+S++ F F + +PT+ +M G +H Sbjct: 14 LVPRGSAIRELKVCLLGDTGVGKSSIVCRFVQDHFDHNISPTIGASFMTKTVPCGNELHK 73 Query: 67 LHIWDTAGQDDYDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVN-HFCKKVPII 125 IWDTAGQ+ + L P++Y ++ ++ +D+T +SF + +W E+ H + + + Sbjct: 74 FLIWDTAGQERFHSLAPMYYRGSAAAVIVYDITKQDSFYTL-KKWVKELKEHGPENIVMA 132 Query: 126 VVGCKTDLCKDKSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNVHAVFQE 185 + G K DL + V +E A S+GA+ +E SA+ N+ +FQ Sbjct: 133 IAGNKCDLSD------------IREVPLKDAKEYAESIGAIV-VETSAKNAINIEELFQG 179 Query: 186 AAEVA 190 + Sbjct: 180 ISRQI 184 >2EW1-A nrPDB Length = 201 Score = 193 bits (490), Expect = 6e-50, Method: Composition-based stats. Identities = 57/202 (28%), Positives = 92/202 (45%), Gaps = 22/202 (10%) Query: 10 EAPPGVRS-----VKVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYM-VNLQVKGK 63 P G K+VL+G+ G GKT L+ F G FP T+ +M +++ G+ Sbjct: 14 LVPRGSMEDYDFLFKIVLIGNAGVGKTCLVRRFTQGLFPPGQGATIGVDFMIKTVEINGE 73 Query: 64 PVHLHIWDTAGQDDYDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVNHFCKKVP 123 V L IWDTAGQ+ + + +Y A+ L+L +D+T SF W E+ + Sbjct: 74 KVKLQIWDTAGQERFRSITQSYYRSANALILTYDITCEESF-RCLPEWLREIEQYASNKV 132 Query: 124 I-IVVGCKTDLCKDKSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNVHAV 182 I ++VG K DL + + V+ R +E + + YLE SA+ DNV + Sbjct: 133 ITVLVGNKIDLAERR------------EVSQQRAEEFS-EAQDMYYLETSAKESDNVEKL 179 Query: 183 FQEAA-EVALSSRGRNFWRRIT 203 F + A + +R ++ Sbjct: 180 FLDLACRLISEARQNTLVNNVS 201 >1EK0-A nrPDB Length = 170 Score = 192 bits (489), Expect = 8e-50, Method: Composition-based stats. Identities = 53/178 (29%), Positives = 90/178 (50%), Gaps = 13/178 (7%) Query: 15 VRSVKVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMVN-LQVKGKPVHLHIWDTA 73 V S+K+VL+G+ GK+S+++ F F E+ PT+ ++ + + V IWDTA Sbjct: 1 VTSIKLVLLGEAAVGKSSIVLRFVSNDFAENKEPTIGAAFLTQRVTINEHTVKFEIWDTA 60 Query: 74 GQDDYDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVNHFCK-KVPIIVVGCKTD 132 GQ+ + L P++Y +A L+ +DVT P SF + W E++ + I +VG K D Sbjct: 61 GQERFASLAPMYYRNAQAALVVYDVTKPQSFIKARH-WVKELHEQASKDIIIALVGNKID 119 Query: 133 LCKDKSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNVHAVFQEAAEVA 190 + ++ G V G+++A G + + E SA+ +NV+ VF E Sbjct: 120 MLQE---------GGERKVAREEGEKLAEEKG-LLFFETSAKTGENVNDVFLGIGEKI 167 >2BMD-A nrPDB Length = 186 Score = 192 bits (488), Expect = 9e-50, Method: Composition-based stats. Identities = 50/178 (28%), Positives = 80/178 (44%), Gaps = 16/178 (8%) Query: 18 VKVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERY-MVNLQVKGKPVHLHIWDTAGQD 76 K +++G+ G GK+ LL F + F + T+ + + V GK V L IWDTAGQ+ Sbjct: 11 FKFLVIGNAGTGKSCLLHQFIEKKFKDDSNHTIGVEFGSKIINVGGKYVKLQIWDTAGQE 70 Query: 77 DYDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVNHFCK-KVPIIVVGCKTDLCK 135 + + +Y A+ LL +D+TS ++ N W + + II+ G K DL Sbjct: 71 RFRSVTRSYYRGAAGALLVYDITSRETY-NALTNWLTDARMLASQNIVIILCGNKKDLDA 129 Query: 136 DKSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNVHAVFQEAAEVALSS 193 D+ VT+ A+ + +LE SA +NV F + A L+ Sbjct: 130 DR------------EVTFLEASRFAQE-NELMFLETSALTGENVEEAFVQCARKILNK 174 >2IL1-A nrPDB Length = 192 Score = 192 bits (487), Expect = 1e-49, Method: Composition-based stats. Identities = 48/187 (25%), Positives = 95/187 (50%), Gaps = 15/187 (8%) Query: 10 EAPPGVRSVKVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYM-VNLQVKGKPVHLH 68 P ++V+++G G GKTSL+ F D F E+ TV + ++++GK + L Sbjct: 19 SPRPADFKLQVIIIGSRGVGKTSLMERFTDDTFCEACKSTVGVDFKIKTVELRGKKIRLQ 78 Query: 69 IWDTAGQDDYDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVNHFC-KKVPIIVV 127 IWDTAGQ+ ++ + +Y A ++L +D+T +FD++ +W ++ + + +++V Sbjct: 79 IWDTAGQERFNSITSAYYRSAKGIILVYDITKKETFDDLP-KWMKMIDKYASEDAELLLV 137 Query: 128 GCKTDLCKDKSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNVHAVFQEAA 187 G K D D+ +T +G++ A+ + + + E SA+ + NV +F + Sbjct: 138 GNKLDCETDR------------EITRQQGEKFAQQITGMRFCEASAKDNFNVDEIFLKLV 185 Query: 188 EVALSSR 194 + L Sbjct: 186 DDILKKM 192 >5XR6-A nrPDB Length = 194 Score = 192 bits (487), Expect = 1e-49, Method: Composition-based stats. Identities = 52/175 (29%), Positives = 77/175 (44%), Gaps = 16/175 (9%) Query: 18 VKVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERY-MVNLQVKGKPVHLHIWDTAGQD 76 K+VL+GD G GK++LL F F T+ + +V+GK V IWDTAGQ+ Sbjct: 26 FKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATKTTKVEGKVVKAQIWDTAGQE 85 Query: 77 DYDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVN-HFCKKVPIIVVGCKTDLCK 135 Y + +Y A LL +DVT +F+N RW E+ H + ++++G K DL Sbjct: 86 RYRAITSAYYRGAVGALLIYDVTRHATFENAA-RWLRELRGHTDPNIVVMLIGNKCDLRH 144 Query: 136 DKSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNVHAVFQEAAEVA 190 L V + A ++ ++E SA NV F E Sbjct: 145 ------------LVAVKTEEAKAFAERE-SLYFMETSALDATNVENAFTEVLTQI 186 >2REX-B nrPDB Length = 197 Score = 191 bits (485), Expect = 2e-49, Method: Composition-based stats. Identities = 73/190 (38%), Positives = 114/190 (60%), Gaps = 1/190 (0%) Query: 8 GEEAPPGVRSVKVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMVNLQVKGKPVHL 67 G P V K+VLVGD CGKT++L V A +PE+Y PTVFE Y L+ + + V L Sbjct: 1 GRAPQPVVARCKLVLVGDVQCGKTAMLQVLAKDCYPETYVPTVFENYTACLETEEQRVEL 60 Query: 68 HIWDTAGQDDYDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVNHFCKKVPIIVV 127 +WDT+G YD +RPL Y D+ +LLCFD++ P + D+ +W E+ +C ++++ Sbjct: 61 SLWDTSGSPYYDNVRPLCYSDSDAVLLCFDISRPETVDSALKKWRTEILDYCPSTRVLLI 120 Query: 128 GCKTDLCKDKSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHD-NVHAVFQEA 186 GCKTDL D S + +L P++Y +G +A+ +GA YLE SA + ++H++F+ A Sbjct: 121 GCKTDLRTDLSTLMELSHQKQAPISYEQGCAIAKQLGAEIYLEGSAFTSEKSIHSIFRTA 180 Query: 187 AEVALSSRGR 196 + + L+ Sbjct: 181 SMLCLNKPSP 190 >6HUF-A nrPDB Length = 182 Score = 190 bits (484), Expect = 3e-49, Method: Composition-based stats. Identities = 49/187 (26%), Positives = 85/187 (45%), Gaps = 17/187 (9%) Query: 18 VKVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYM-VNLQVKGKPVHLHIWDTAGQD 76 +K + +GD G GKTS+L + DG F + TV + + K + L +WDTAG + Sbjct: 10 IKFLALGDSGVGKTSVLYQYTDGKFNSKFITTVGIDFREKTIYRNDKRIKLQLWDTAGLE 69 Query: 77 DYDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVN--HFCKKVPIIVVGCKTDLC 134 + L F+ DA LL FD+T+ SF N+ N W ++ + + I++ G K+DL Sbjct: 70 RFRSLTTAFFRDAMGFLLLFDLTNEESFLNVRN-WISQLKTHAYSENPDIVLCGNKSDLE 128 Query: 135 KDKSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNVHAVFQEAAEVALSSR 194 ++ V +++A G + Y E SA N+ + ++ + Sbjct: 129 DER------------VVAAAEARQLAEHYG-IPYFETSAANGTNISQAIEMLLDLIMKRM 175 Query: 195 GRNFWRR 201 R+ + Sbjct: 176 ERSVDKS 182 >5UB8-A nrPDB Length = 222 Score = 190 bits (484), Expect = 3e-49, Method: Composition-based stats. Identities = 49/185 (26%), Positives = 78/185 (42%), Gaps = 16/185 (8%) Query: 18 VKVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERY-MVNLQVKGKPVHLHIWDTAGQD 76 K+VL+GD G GK++LL F F T+ + L++ GK V IWDTAGQ+ Sbjct: 16 YKIVLIGDSGVGKSNLLSRFTRDEFNLESRSTIGVEFATRTLEIDGKRVKAQIWDTAGQE 75 Query: 77 DYDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVNHFCK-KVPIIVVGCKTDLCK 135 Y + +Y A L+ +D+ S++++ RW E+ + I +VG K+DL Sbjct: 76 RYRAITSAYYRGAVGALIVYDIAKTESYESVS-RWLKELKEHADANIIIELVGNKSDLDH 134 Query: 136 DKSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNVHAVFQEAAEVALSSRG 195 L V + A + + E SA DNV F + + Sbjct: 135 ------------LRAVPTEEAKNFAMENN-LLFTEASALSSDNVDLSFHQLLKNIYEMIS 181 Query: 196 RNFWR 200 ++ Sbjct: 182 KHQLE 186 >4PHF-A nrPDB Length = 184 Score = 190 bits (483), Expect = 4e-49, Method: Composition-based stats. Identities = 56/193 (29%), Positives = 90/193 (46%), Gaps = 19/193 (9%) Query: 8 GEEAPPGVRSVKVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERY-MVNLQVKGKPV- 65 G + +KV+++GD G GKTSL+ + + + Y T+ + + V G V Sbjct: 1 GHMSSRKKNILKVIILGDSGVGKTSLMHRYVNDKYSCQYKATIGADFLTKEVTVDGDKVA 60 Query: 66 HLHIWDTAGQDDYDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVNHFC-----K 120 + +WDTAGQ+ + L FY A +L +DVT+ +SF+NI W E + Sbjct: 61 TMQVWDTAGQERFQSLGVAFYRGADCCVLVYDVTNASSFENI-KSWRDEFLVHANVNSPE 119 Query: 121 KVPIIVVGCKTDLCKDKSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNVH 180 P +++G K D + K + V+ QE+A+S+G + SA+ NV Sbjct: 120 TFPFVILGNKIDAEESKKI-----------VSEKSAQELAKSLGDIPLFLTSAKNAINVD 168 Query: 181 AVFQEAAEVALSS 193 F+E A AL Sbjct: 169 TAFEEIARSALQQ 181 >3BC1-A nrPDB Length = 195 Score = 190 bits (482), Expect = 4e-49, Method: Composition-based stats. Identities = 52/197 (26%), Positives = 87/197 (44%), Gaps = 27/197 (13%) Query: 18 VKVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMVNLQV-----------KGKPVH 66 +K + +GD G GKTS+L + DG F + TV + V +G+ +H Sbjct: 12 IKFLALGDSGVGKTSVLYQYTDGKFNSKFITTVGIDFREKRVVYRANGPDGAVGRGQRIH 71 Query: 67 LHIWDTAGQDDYDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVN--HFCKKVPI 124 L +WDTAG + + L F+ DA LL FD+T+ SF N+ N W ++ + + I Sbjct: 72 LQLWDTAGLERFRSLTTAFFRDAMGFLLLFDLTNEQSFLNVRN-WISQLQMHAYSENPDI 130 Query: 125 IVVGCKTDLCKDKSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNVHAVFQ 184 ++ G K+DL + V +E+A G + Y E SA N+ + Sbjct: 131 VLCGNKSDLEDQR------------AVKEEEARELAEKYG-IPYFETSAANGTNISHAIE 177 Query: 185 EAAEVALSSRGRNFWRR 201 ++ + R+ + Sbjct: 178 MLLDLIMKRMERSVDKS 194 >4KYI-B nrPDB Length = 170 Score = 190 bits (482), Expect = 5e-49, Method: Composition-based stats. Identities = 46/176 (26%), Positives = 80/176 (45%), Gaps = 16/176 (9%) Query: 17 SVKVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMV-NLQVKGKPVHLHIWDTAGQ 75 K+VL+G+ GK+SL++ F G F E T+ ++ + + V IWDTAG Sbjct: 9 QFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDTTVKFEIWDTAGL 68 Query: 76 DDYDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVNHFC-KKVPIIVVGCKTDLC 134 + Y L P++Y A ++ +D+T+ ++F N W E+ + I + G K DL Sbjct: 69 ERYHSLAPMYYRGAQAAIVVYDITNTDTFARAKN-WVKELQRQASPNIVIALAGNKADLA 127 Query: 135 KDKSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNVHAVFQEAAEVA 190 + V + Q A ++ ++E SA+ NV+ +F A+ Sbjct: 128 SKR------------AVEFQEAQAYADD-NSLLFMETSAKTAMNVNEIFMAIAKKL 170 >2IEZ-A nrPDB Length = 220 Score = 189 bits (481), Expect = 6e-49, Method: Composition-based stats. Identities = 52/192 (27%), Positives = 83/192 (43%), Gaps = 27/192 (14%) Query: 18 VKVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMVNLQVKGKP-----------VH 66 +K++ +GD G GKT+ L + D F + TV + V VH Sbjct: 12 IKLLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYDTQGADGASGKAFKVH 71 Query: 67 LHIWDTAGQDDYDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVN--HFCKKVPI 124 L +WDTAG + + L F+ DA LL FD+TS SF N+ N W ++ +C+ I Sbjct: 72 LQLWDTAGLERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVRN-WMSQLQANAYCENPDI 130 Query: 125 IVVGCKTDLCKDKSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNVHAVFQ 184 +++G K DL + V + +E+A G + Y E SA NV + Sbjct: 131 VLIGNKADLPDQR------------EVNERQARELAEKYG-IPYFETSAATGQNVEKSVE 177 Query: 185 EAAEVALSSRGR 196 ++ + + Sbjct: 178 TLLDLIMKRMEK 189 >2IEY-A nrPDB Length = 195 Score = 188 bits (479), Expect = 1e-48, Method: Composition-based stats. Identities = 52/192 (27%), Positives = 83/192 (43%), Gaps = 27/192 (14%) Query: 18 VKVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMVNLQVKGKP-----------VH 66 +K++ +GD G GKT+ L + D F + TV + V VH Sbjct: 12 IKLLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYDTQGADGASGKAFKVH 71 Query: 67 LHIWDTAGQDDYDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVN--HFCKKVPI 124 L +WDTAG + + L F+ DA LL FD+TS SF N+ N W ++ +C+ I Sbjct: 72 LQLWDTAGLERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVRN-WMSQLQANAYCENPDI 130 Query: 125 IVVGCKTDLCKDKSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNVHAVFQ 184 +++G K DL + V + +E+A G + Y E SA NV + Sbjct: 131 VLIGNKADLPDQR------------EVNERQARELAEKYG-IPYFETSAATGQNVEKSVE 177 Query: 185 EAAEVALSSRGR 196 ++ + + Sbjct: 178 TLLDLIMKRMEK 189 >6IYB-A nrPDB Length = 199 Score = 188 bits (477), Expect = 2e-48, Method: Composition-based stats. Identities = 55/183 (30%), Positives = 79/183 (43%), Gaps = 21/183 (11%) Query: 18 VKVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERY-MVNLQVKGKPVHLHIWDTAGQD 76 +KV+++GD G GKTSL+ + + F Y T+ + + V + V + IWDTAG + Sbjct: 14 LKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGLE 73 Query: 77 DYDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEV-----NHFCKKVPIIVVGCKT 131 + FY A +L FDVT+PN+F + + W E + P +V+G K Sbjct: 74 RFQS-GVAFYRGADCCVLVFDVTAPNTFKTL-DSWRDEFLIQASPRDPENFPFVVLGNKI 131 Query: 132 DLCKDKSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNVHAVFQEAAEVAL 191 DL V R Q S + Y E SA+ NV FQ A AL Sbjct: 132 DLEN-------------RQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIARNAL 178 Query: 192 SSR 194 Sbjct: 179 KQE 181 >1YVD-A nrPDB Length = 169 Score = 187 bits (476), Expect = 3e-48, Method: Composition-based stats. Identities = 44/177 (24%), Positives = 88/177 (49%), Gaps = 14/177 (7%) Query: 15 VRSVKVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYM-VNLQVKGKPVHLHIWDTA 73 +R +KV L+GD G GK+S++ F + +F + PT+ +M +Q + + IWDTA Sbjct: 3 LRELKVCLLGDTGVGKSSIVWRFVEDSFDPNINPTIGASFMTKTVQYQNELHKFLIWDTA 62 Query: 74 GQDDYDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVNHFCKKVPIIVVGCKTDL 133 GQ+ + L P++Y ++ ++ +D+T +F + N H + + + G K DL Sbjct: 63 GQERFRALAPMYYRGSAAAIIVYDITKEETFSTLKNWVRELRQHGPPSIVVAIAGNKCDL 122 Query: 134 CKDKSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNVHAVFQEAAEVA 190 + ++ + ++ A S+ A+ ++E SA+ N++ +F E + Sbjct: 123 TDVREVMER------------DAKDYADSIHAI-FVETSAKNAININELFIEISRRI 166 >5CM8-B nrPDB Length = 203 Score = 185 bits (470), Expect = 1e-47, Method: Composition-based stats. Identities = 54/193 (27%), Positives = 84/193 (43%), Gaps = 14/193 (7%) Query: 6 AAGEEAPPGVRSVKVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMVNLQVKGKPV 65 + ++ G KV++VG GG GK++L + F F E Y PT + Y + + G+ V Sbjct: 2 SMSKKPTAGPALHKVIMVGSGGVGKSALTLQFMYDEFVEDYEPTKADSYRKKVVLDGEEV 61 Query: 66 HLHIWDTAGQDDYDRLRPLFYPDASVLLLCFDVTSPNSFDNIFN-RWYPEVNHFCKKVPI 124 + I DTAGQ+DY +R ++ L F +T SF R + +P Sbjct: 62 QIDILDTAGQEDYAAIRDNYFRSGEGFLCVFSITDDESFQATQEFREQILRVKNDESIPF 121 Query: 125 IVVGCKTDLCKDKSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNVHAVFQ 184 ++VG K DL + V Q A+ AV Y+E SA+ +NV VF Sbjct: 122 LLVGNKCDLNDKRK------------VPLSECQLRAQQW-AVPYVETSAKTRENVDKVFF 168 Query: 185 EAAEVALSSRGRN 197 + S + + Sbjct: 169 DLMREIRSRKTED 181 >3BFK-A nrPDB Length = 181 Score = 185 bits (469), Expect = 1e-47, Method: Composition-based stats. Identities = 53/187 (28%), Positives = 86/187 (45%), Gaps = 17/187 (9%) Query: 18 VKVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERY-MVNLQVKG-KPVHLHIWDTAGQ 75 K+VL+GD G GK++LL F F T+ + ++Q+K K + IWDTAGQ Sbjct: 8 FKIVLIGDSGVGKSNLLSRFTRDEFNLESKSTIGVEFATKSIQLKNNKIIKAQIWDTAGQ 67 Query: 76 DDYDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVNHFCK-KVPIIVVGCKTDLC 134 + Y + +Y A LL +D+T NSF+NI +W E+ + I++VG K+DL Sbjct: 68 ERYRAITSAYYRGAVGALLVYDITKKNSFENI-EKWLKELRDNADSNIVILLVGNKSDLK 126 Query: 135 KDKSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNVHAVFQEAAEVALSSR 194 L + + + A+ +A++E SA NV F + + R Sbjct: 127 H------------LRVINDNDATQYAKKEK-LAFIETSALEATNVELAFHQLLNEIYNVR 173 Query: 195 GRNFWRR 201 + + Sbjct: 174 QKKQATK 180 >1Z06-A nrPDB Length = 189 Score = 185 bits (469), Expect = 2e-47, Method: Composition-based stats. Identities = 49/189 (25%), Positives = 84/189 (44%), Gaps = 23/189 (12%) Query: 8 GEEAPPGVRS--VKVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMVN-LQVKGKP 64 G P G RS K++++GD GKT L F G FP+ T+ + + + G+ Sbjct: 9 GSLVPRGSRSRIFKIIVIGDSNVGKTCLTYRFCAGRFPDRTEATIGVDFRERAVDIDGER 68 Query: 65 VHLHIWDTAGQDDYD-RLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVNHF--CKK 121 + + +WDTAGQ+ + + +Y + ++ +D+T+ SF ++ W E Sbjct: 69 IKIQLWDTAGQERFRKSMVQHYYRNVHAVVFVYDMTNMASFHSLPA-WIEECKQHLLAND 127 Query: 122 VPIIVVGCKTDLCKDKSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSAR---LHDN 178 +P I+VG K DL V Q+ A + ++ E SA+ +D+ Sbjct: 128 IPRILVGNKCDLR------------SAIQVPTDLAQKFADTH-SMPLFETSAKNPNDNDH 174 Query: 179 VHAVFQEAA 187 V A+F A Sbjct: 175 VEAIFMTLA 183 >3RWM-B nrPDB Length = 185 Score = 185 bits (469), Expect = 2e-47, Method: Composition-based stats. Identities = 48/191 (25%), Positives = 78/191 (40%), Gaps = 16/191 (8%) Query: 8 GEEAPPGVRSVKVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERY-MVNLQVKGKPVH 66 G K+VL+GD G GK++LL F F T+ + ++V+ K + Sbjct: 1 GAMGYDYDYLFKIVLIGDSGVGKSNLLSRFTTDEFNIESKSTIGVEFATRTIEVENKKIK 60 Query: 67 LHIWDTAGQDDYDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVNHFC-KKVPII 125 IWDTAG + Y + +Y A L+ +D++ +S++N N W E+ V + Sbjct: 61 AQIWDTAGLERYRAITSAYYRGAVGALIVYDISKSSSYENC-NHWLTELRENADDNVAVG 119 Query: 126 VVGCKTDLCKDKSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNVHAVFQE 185 ++G K+DL L V + A + + E SA DNV F+E Sbjct: 120 LIGNKSDLAH------------LRAVPTDEAKNFAME-NQMLFTETSALNSDNVDKAFRE 166 Query: 186 AAEVALSSRGR 196 + Sbjct: 167 LIVAIFQMVSK 177 >2G77-B nrPDB Length = 198 Score = 185 bits (469), Expect = 2e-47, Method: Composition-based stats. Identities = 48/191 (25%), Positives = 85/191 (44%), Gaps = 21/191 (10%) Query: 4 AQAAGEEAPPGVRSVKVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMVN-LQVKG 62 + A+G P R K++++GD GKT L F G FP+ T+ + + + G Sbjct: 16 SGASGCLPPARSRIFKIIVIGDSNVGKTCLTYRFCAGRFPDRTEATIGVDFRERAVDIDG 75 Query: 63 KPVHLHIWDTAGQDDYD-RLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVNHF--C 119 + + + +WDTAGQ+ + + +Y + ++ +D+T+ SF ++ W E Sbjct: 76 ERIKIQLWDTAGQERFRKSMVQHYYRNVHAVVFVYDMTNMASFHSLPA-WIEECKQHLLA 134 Query: 120 KKVPIIVVGCKTDLCKDKSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSAR---LH 176 +P I+VG K DL V Q+ A + ++ E SA+ + Sbjct: 135 NDIPRILVGNKCDLR------------SAIQVPTDLAQKFADTH-SMPLFETSAKNPNDN 181 Query: 177 DNVHAVFQEAA 187 D+V A+F A Sbjct: 182 DHVEAIFMTLA 192 >2FFQ-A nrPDB Length = 171 Score = 184 bits (468), Expect = 2e-47, Method: Composition-based stats. Identities = 51/178 (28%), Positives = 91/178 (51%), Gaps = 16/178 (8%) Query: 17 SVKVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYM-VNLQVKGKPVHLHIWDTAGQ 75 K+V +G+ GKTSL+ F +F +Y T+ ++ + ++ + V L +WDTAGQ Sbjct: 2 KFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQ 61 Query: 76 DDYDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVN-HFCKKVPIIVVGCKTDLC 134 + + L P + D++V ++ +D+T+ NSF +W +V V I++VG KTDL Sbjct: 62 ERFRSLIPSYIRDSTVAVVVYDITNLNSFQQTS-KWIDDVRTERGSDVIIMLVGNKTDLA 120 Query: 135 KDKSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNVHAVFQEAAEVALS 192 + +T G++ A+ + +V ++E SA+ NV +F+ A L Sbjct: 121 DKRQ------------ITIEEGEQRAKEL-SVMFIETSAKTGYNVKQLFRRVASALLE 165 >1YZU-A nrPDB Length = 170 Score = 184 bits (467), Expect = 3e-47, Method: Composition-based stats. Identities = 53/179 (29%), Positives = 94/179 (52%), Gaps = 16/179 (8%) Query: 17 SVKVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERY-MVNLQVKGKPVHLHIWDTAGQ 75 S KVVL+G+G GKTSL++ + + F + + T+ + L + GK V+L IWDTAGQ Sbjct: 6 SFKVVLLGEGCVGKTSLVLRYCENKFNDKHITTLQASFLTKKLNIGGKRVNLAIWDTAGQ 65 Query: 76 DDYDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVNH-FCKKVPIIVVGCKTDLC 134 + + L P++Y D++ +L +D+T +SF + N W E+ ++ + +VG K DL Sbjct: 66 ERFHALGPIYYRDSNGAILVYDITDEDSFQKVKN-WVKELRKMLGNEICLCIVGNKIDLE 124 Query: 135 KDKSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNVHAVFQEAAEVALSS 193 K++ V+ + A SVGA + SA+ + + +F + + + + Sbjct: 125 KERH------------VSIQEAESYAESVGA-KHYHTSAKQNKGIEELFLDLCKRMIET 170 >5YOZ-A nrPDB Length = 177 Score = 183 bits (466), Expect = 4e-47, Method: Composition-based stats. Identities = 49/175 (28%), Positives = 84/175 (48%), Gaps = 15/175 (8%) Query: 15 VRSVKVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYM-VNLQVKGKPVHLHIWDTA 73 S K+V++G+ G GK+S+ + F F + T+ ++ + + G+ + IWDTA Sbjct: 13 ATSAKIVMLGESGAGKSSIALRFTRNEFLANQETTIGAAFLSKTVMIDGRALKYEIWDTA 72 Query: 74 GQDDYDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVNHFCK-KVPIIVVGCKTD 132 G + + L P++Y AS L+ +D+T+ S W E+ + I++VG K D Sbjct: 73 GLERFRSLAPIYYRGASGALVVYDITNSESLKKAQT-WIKELRANADPSLIIVLVGNKKD 131 Query: 133 LCKDKSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNVHAVFQEAA 187 L L V++ GQ +A A+ E SA+ ++NV VF + A Sbjct: 132 L------------GSLRQVSFEDGQRLAAEEQLAAFYEASAKDNNNVEQVFLDLA 174 >1D5C-A nrPDB Length = 162 Score = 183 bits (465), Expect = 4e-47, Method: Composition-based stats. Identities = 51/175 (29%), Positives = 84/175 (48%), Gaps = 14/175 (8%) Query: 17 SVKVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYM-VNLQVKGKPVHLHIWDTAGQ 75 K+V +G+ GKTS++ F F +Y T+ ++ L + PV L +WDTAGQ Sbjct: 1 KYKLVFLGEQAVGKTSIITRFMYDTFDNNYQSTIGIDFLSKTLYLDEGPVRLQLWDTAGQ 60 Query: 76 DDYDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVNHFCKKVPIIVVGCKTDLCK 135 + + L P + D++ ++ +D+T+ SF+N +N K V I +VG KTDL Sbjct: 61 ERFRSLIPSYIRDSAAAIVVYDITNRQSFENTTKWIQDILNERGKDVIIALVGNKTDLGD 120 Query: 136 DKSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNVHAVFQEAAEVA 190 L VTY G + A+ + + E SA+ N+ +F++ A Sbjct: 121 ------------LRKVTYEEGMQKAQEYNTM-FHETSAKAGHNIKVLFKKTASKL 162 >5LEF-A nrPDB Length = 191 Score = 183 bits (465), Expect = 4e-47, Method: Composition-based stats. Identities = 52/182 (28%), Positives = 91/182 (50%), Gaps = 17/182 (9%) Query: 8 GEEAPPGVRSVKVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYM-VNLQVKGKPVH 66 G P +R K+V +G+ GKTSL+ F +F +Y T+ ++ + ++ + V Sbjct: 1 GAMGNP-LRKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVR 59 Query: 67 LHIWDTAGQDDYDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVN-HFCKKVPII 125 L +WDTAG + + L P + D++V ++ +D+T+ NSF +W +V V I+ Sbjct: 60 LQLWDTAGLERFRSLIPSYIRDSTVAVVVYDITNVNSFQQ-TTKWIDDVRTERGSDVIIM 118 Query: 126 VVGCKTDLCKDKSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNVHAVFQE 185 +VG KTDL + V+ G+ A+ + V ++E SA+ NV +F+ Sbjct: 119 LVGNKTDLADKRQ------------VSIEEGERKAKELN-VMFIETSAKAGYNVKQLFRR 165 Query: 186 AA 187 A Sbjct: 166 VA 167 >3TSO-A nrPDB Length = 178 Score = 183 bits (465), Expect = 5e-47, Method: Composition-based stats. Identities = 48/182 (26%), Positives = 79/182 (43%), Gaps = 16/182 (8%) Query: 18 VKVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMV-NLQVKGKPVHLHIWDTAGQD 76 KVVL+G+ G GKT+LL F F T+ + + + V IWDTAG + Sbjct: 11 FKVVLIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVMLGTAAVKAQIWDTAGLE 70 Query: 77 DYDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEV-NHFCKKVPIIVVGCKTDLCK 135 Y + +Y A LL FD+T ++ + RW E+ +H + +++VG K+DL + Sbjct: 71 RYRAITSAYYRGAVGALLVFDLTKHQTY-AVVERWLKELYDHAEATIVVMLVGNKSDLSQ 129 Query: 136 DKSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNVHAVFQEAAEVALSSRG 195 + V + A + G + +LE SA NV F+ + + Sbjct: 130 AR------------EVPTEEARMFAENNG-LLFLETSALDSTNVELAFETVLKEIFAKVS 176 Query: 196 RN 197 + Sbjct: 177 KQ 178 >2KE5-A nrPDB Length = 174 Score = 181 bits (460), Expect = 2e-46, Method: Composition-based stats. Identities = 53/182 (29%), Positives = 80/182 (43%), Gaps = 15/182 (8%) Query: 19 KVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMVNLQVKGKPVHLHIWDTAGQDDY 78 KV++VG GG GK++L + F F E Y PT + Y + + G+ V + I DTAG +DY Sbjct: 5 KVIMVGSGGVGKSALTLQFMYDEFVEDYEPTKADSYRKKVVLDGEEVQIDILDTAGLEDY 64 Query: 79 DRLRPLFYPDASVLLLCFDVTSPNSFDNIFN--RWYPEVNHFCKKVPIIVVGCKTDLCKD 136 +R ++ LL F +T SF V K+P++VVG K+DL + Sbjct: 65 AAIRDNYFRSGEGFLLVFSITEHESFTATAEFREQILRVKAEEDKIPLLVVGNKSDLEER 124 Query: 137 KSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNVHAVFQEAAEVALSSRGR 196 + V + A G V Y+E SA+ NV VF + + + Sbjct: 125 RQ------------VPVEEARSKAEEWG-VQYVETSAKTRANVDKVFFDLMREIRTKKMS 171 Query: 197 NF 198 Sbjct: 172 EN 173 >3CON-A nrPDB Length = 190 Score = 180 bits (458), Expect = 3e-46, Method: Composition-based stats. Identities = 51/197 (25%), Positives = 86/197 (43%), Gaps = 19/197 (9%) Query: 6 AAGEEAP--PGVRSVKVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMVNLQVKGK 63 ++G E G+ K+V+VG GG GK++L + F + Y PT+ + Y + + G+ Sbjct: 8 SSGRENLYFQGMTEYKLVVVGAGGVGKSALTIQLIQNHFVDEYDPTIEDSYRKQVVIDGE 67 Query: 64 PVHLHIWDTAGQDDYDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVNHF--CKK 121 L I DTAGQ++Y +R + L F + + SF +I N + ++ Sbjct: 68 TCLLDILDTAGQEEYSAMRDQYMRTGEGFLCVFAINNSKSFADI-NLYREQIKRVKDSDD 126 Query: 122 VPIIVVGCKTDLCKDKSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNVHA 181 VP+++VG K DL V + E+A+S G + ++E SA+ V Sbjct: 127 VPMVLVGNKCDL-------------PTRTVDTKQAHELAKSYG-IPFIETSAKTRQGVED 172 Query: 182 VFQEAAEVALSSRGRNF 198 F R + Sbjct: 173 AFYTLVREIRQYRMKKL 189 >2GIL-A nrPDB Length = 162 Score = 180 bits (458), Expect = 3e-46, Method: Composition-based stats. Identities = 50/173 (28%), Positives = 88/173 (50%), Gaps = 16/173 (9%) Query: 17 SVKVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYM-VNLQVKGKPVHLHIWDTAGQ 75 K+V +G+ GKTSL+ F +F +Y T+ ++ + ++ + V L +WDTAGQ Sbjct: 1 KFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQ 60 Query: 76 DDYDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVN-HFCKKVPIIVVGCKTDLC 134 + + L P + D++V ++ +D+T+ NSF +W +V V I++VG KTDL Sbjct: 61 ERFRSLIPSYIRDSTVAVVVYDITNVNSFQQ-TTKWIDDVRTERGSDVIIMLVGNKTDLA 119 Query: 135 KDKSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNVHAVFQEAA 187 + V+ G+ A+ + V ++E SA+ NV +F+ A Sbjct: 120 DKRQ------------VSIEEGERKAKELN-VMFIETSAKAGYNVKQLFRRVA 159 >2P5S-A nrPDB Length = 199 Score = 180 bits (457), Expect = 4e-46, Method: Composition-based stats. Identities = 54/180 (30%), Positives = 85/180 (47%), Gaps = 10/180 (5%) Query: 16 RSVKVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERY-MVNLQVKGKPVHLHIWDTAG 74 ++ K+VL GD GK+S LM F E+ + T+ + M L V G+ L +WDTAG Sbjct: 27 KAYKIVLAGDAAVGKSSFLMRLCKNEFRENISATLGVDFQMKTLIVDGERTVLQLWDTAG 86 Query: 75 QDDYDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVNHFC-KKVPIIVVGCKTDL 133 Q+ + + ++ A +LL +DVT SF NI W + + VPI++VG K D+ Sbjct: 87 QERFRSIAKSYFRKADGVLLLYDVTCEKSFLNIRE-WVDMIEDAAHETVPIMLVGNKADI 145 Query: 134 CKDKSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNVHAVFQEAAEVALSS 193 G + V H G+++A + GA+ + E SA+ N+ A Sbjct: 146 RD------TAATEGQKCVPGHFGEKLAMTYGAL-FCETSAKDGSNIVEAVLHLAREVKKR 198 >2ERX-A nrPDB Length = 172 Score = 180 bits (456), Expect = 5e-46, Method: Composition-based stats. Identities = 48/174 (27%), Positives = 77/174 (44%), Gaps = 15/174 (8%) Query: 15 VRSVKVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMVNLQVKGKPVHLHIWDTAG 74 +V + G GG GK+SL++ F G F ESY PTV + Y + L I DT G Sbjct: 1 SNDYRVAVFGAGGVGKSSLVLRFVKGTFRESYIPTVEDTYRQVISCDKSICTLQITDTTG 60 Query: 75 QDDYDRLRPLFYPDASVLLLCFDVTSPNSFDNIFN--RWYPEVNHFCKKVPIIVVGCKTD 132 + ++ L +L + +TS S + + E+ + +PI++VG K D Sbjct: 61 SHQFPAMQRLSISKGHAFILVYSITSRQSLEELKPIYEQICEIKGDVESIPIMLVGNKCD 120 Query: 133 LCKDKSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNVHAVFQEA 186 + V + +AR+ A++E SA+L+ NV +FQE Sbjct: 121 ESPSR------------EVQSSEAEALARTWK-CAFMETSAKLNHNVKELFQEL 161 >5HZH-A nrPDB Length = 332 Score = 179 bits (454), Expect = 9e-46, Method: Composition-based stats. Identities = 70/143 (48%), Positives = 87/143 (60%) Query: 52 ERYMVNLQVKGKPVHLHIWDTAGQDDYDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRW 111 + L GKPV+L +WDTAG +DYDRLRPL YP V L+CF + SP SF+N+ +W Sbjct: 190 DEAAKELGSGGKPVNLGLWDTAGLEDYDRLRPLSYPQTDVFLICFSLVSPASFENVRAKW 249 Query: 112 YPEVNHFCKKVPIIVVGCKTDLCKDKSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLEC 171 YPEV H C PII+VG K DL DK + KL+ L P+TY +G MA+ +GAV YLEC Sbjct: 250 YPEVRHHCPNTPIILVGTKLDLRDDKDTIEKLKEKKLTPITYPQGLAMAKEIGAVKYLEC 309 Query: 172 SARLHDNVHAVFQEAAEVALSSR 194 SA + VF EA L Sbjct: 310 SALTQRGLKTVFDEAIRAVLCPP 332 Score = 76.5 bits (187), Expect = 7e-15, Method: Composition-based stats. Identities = 23/48 (47%), Positives = 32/48 (66%) Query: 15 VRSVKVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMVNLQVKG 62 ++++K V+VGDG GKT LL+ + AFP Y PTVF+ Y N+ V G Sbjct: 4 MQAIKCVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDG 51 >2N1B-A nrPDB Length = 261 Score = 178 bits (453), Expect = 1e-45, Method: Composition-based stats. Identities = 56/200 (28%), Positives = 94/200 (47%), Gaps = 19/200 (9%) Query: 2 TAAQAAGEEAPPGVRSV--KVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFER-YMVNL 58 ++ AAG A G V K+VLVGDGG GKT+ + G F + Y T+ + + Sbjct: 34 SSRSAAGTMAAQGEPQVQFKLVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVF 93 Query: 59 QVKGKPVHLHIWDTAGQDDYDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVNHF 118 P+ ++WDTAGQ+ + LR +Y A ++ FDVTS ++ N+ N W+ ++ Sbjct: 94 HTNRGPIKFNVWDTAGQEKFGGLRDGYYIQAQCAIIMFDVTSRVTYKNVPN-WHRDLVRV 152 Query: 119 CKKVPIIVVGCKTDLCKDKSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDN 178 C+ +PI++ G K D+ R+ + + +HR + + Y + SA+ + N Sbjct: 153 CENIPIVLCGNKVDIKD--------RKVKAKSIVFHRKKNL-------QYYDISAKSNYN 197 Query: 179 VHAVFQEAAEVALSSRGRNF 198 F A + F Sbjct: 198 FEKPFLWLARKLIGDPNLEF 217 >1ZC4-A nrPDB Length = 175 Score = 178 bits (452), Expect = 1e-45, Method: Composition-based stats. Identities = 51/181 (28%), Positives = 79/181 (43%), Gaps = 16/181 (8%) Query: 19 KVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMVNLQVKGKPVHLHIWDTAGQDDY 78 KV++VG GG GK++L + F F E Y PT + Y + + G+ V + I DTAG +DY Sbjct: 8 KVIMVGSGGVGKSALTLQFMYDEFVEDYEPTKADSYRKKVVLDGEEVQIDILDTAGLEDY 67 Query: 79 DRLRPLFYPDASVLLLCFDVTSPNSFDNI--FNRWYPEVNHFCKKVPIIVVGCKTDLCKD 136 +R ++ L F +T SF F V + VP ++VG K+DL Sbjct: 68 AAIRDNYFRSGEGFLCVFSITEMESFAATADFREQILRVKE-DENVPFLLVGNKSDLEDK 126 Query: 137 KSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNVHAVFQEAAEVALSSRGR 196 + V+ + A V Y+E SA+ NV VF + + + Sbjct: 127 RQ------------VSVEEAKNRAEQWN-VNYVETSAKTRANVDKVFFDLMREIRARKME 173 Query: 197 N 197 + Sbjct: 174 D 174 >3WYF-A nrPDB Length = 219 Score = 178 bits (452), Expect = 2e-45, Method: Composition-based stats. Identities = 56/199 (28%), Positives = 95/199 (47%), Gaps = 22/199 (11%) Query: 1 MTAAQAAGEEAPPGVRSVKVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFER-YMVNLQ 59 M+A A GE V + K+VLVGDGG GKT+ + G F + Y T+ + ++ Sbjct: 1 MSAPAANGE-----VPTFKLVLVGDGGTGKTTFVKRHLTGEFEKKYIATIGVEVHPLSFY 55 Query: 60 VKGKPVHLHIWDTAGQDDYDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVNHFC 119 + +WDTAG + + LR +Y +A ++ FDVTS ++ N+ N W+ ++ C Sbjct: 56 TNFGEIKFDVWDTAGLEKFGGLRDGYYINAQCAIIMFDVTSRITYKNVPN-WHRDLVRVC 114 Query: 120 KKVPIIVVGCKTDLCKDKSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNV 179 + +PI++ G K D+ K R+ + +T+HR + + Y + SA+ + N Sbjct: 115 ENIPIVLCGNKVDV--------KERKVKAKTITFHRKKNL-------QYYDISAKSNYNF 159 Query: 180 HAVFQEAAEVALSSRGRNF 198 F A + F Sbjct: 160 EKPFLWLARKLAGNPQLEF 178 >4WA7-A nrPDB Length = 170 Score = 177 bits (450), Expect = 2e-45, Method: Composition-based stats. Identities = 47/185 (25%), Positives = 84/185 (45%), Gaps = 17/185 (9%) Query: 14 GVRSVKVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMVNLQVKGKPVHLHIWDTA 73 G+ K+V+VG GG GK++L + F + Y PT+ + Y + + G+ L I DTA Sbjct: 1 GMTEYKLVVVGAGGVGKSALTIQLIQNHFVDEYDPTIEDSYRKQVVIDGETCLLDILDTA 60 Query: 74 GQDDYDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVNHF--CKKVPIIVVGCKT 131 G ++Y +R + L F + + SF++I + + ++ + VP+++VG K Sbjct: 61 GLEEYSAMRDQYMRTGEGFLCVFAINNTKSFEDI-HHYREQIKRVKDSEDVPMVLVGNKC 119 Query: 132 DLCKDKSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNVHAVFQEAAEVAL 191 DL V + Q++ARS G + ++E SA+ V F Sbjct: 120 DL-------------PSRTVDTKQAQDLARSYG-IPFIETSAKTRQGVDDAFYTLVREIR 165 Query: 192 SSRGR 196 + + Sbjct: 166 KHKEK 170 >5XOJ-A nrPDB Length = 182 Score = 177 bits (449), Expect = 3e-45, Method: Composition-based stats. Identities = 56/199 (28%), Positives = 95/199 (47%), Gaps = 22/199 (11%) Query: 1 MTAAQAAGEEAPPGVRSVKVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFER-YMVNLQ 59 M+A A GE V + K+VLVGDGG GKT+ + G F + Y T+ + ++ Sbjct: 1 MSAPAANGE-----VPTFKLVLVGDGGTGKTTFVKRHLTGEFEKKYIATIGVEVHPLSFY 55 Query: 60 VKGKPVHLHIWDTAGQDDYDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVNHFC 119 + +WDTAG + + LR +Y +A ++ FDVTS ++ N+ N W+ ++ C Sbjct: 56 TNFGEIKFDVWDTAGLEKFGGLRDGYYINAQCAIIMFDVTSRITYKNVPN-WHRDLVRVC 114 Query: 120 KKVPIIVVGCKTDLCKDKSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNV 179 + +PI++ G K D+ K R+ + +T+HR + + Y + SA+ + N Sbjct: 115 ENIPIVLCGNKVDV--------KERKVKAKTITFHRKKNL-------QYYDISAKSNYNF 159 Query: 180 HAVFQEAAEVALSSRGRNF 198 F A + F Sbjct: 160 EKPFLWLARKLAGNPQLEF 178 >5WDQ-A nrPDB Length = 170 Score = 175 bits (443), Expect = 1e-44, Method: Composition-based stats. Identities = 47/181 (25%), Positives = 81/181 (44%), Gaps = 17/181 (9%) Query: 14 GVRSVKVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMVNLQVKGKPVHLHIWDTA 73 + K+V+VG GG GK++L + F + Y PT+ + Y + + G+ L I DTA Sbjct: 4 HMTEYKLVVVGAGGVGKSALTIQLIQNHFVDEYDPTIEDSYRKQVVIDGETCLLDILDTA 63 Query: 74 GQDDYDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVNHF--CKKVPIIVVGCKT 131 GQ++Y +R + L F + + SF++I +++ ++ VP+++VG K Sbjct: 64 GQEEYSAMRDQYMRTGEGFLCVFAINNTKSFEDI-HQYREQIKRVKDSDDVPMVLVGNKC 122 Query: 132 DLCKDKSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNVHAVFQEAAEVAL 191 D V + Q++ARS G + Y+E SA+ V F Sbjct: 123 D-------------AAARTVESRQAQDLARSYG-IPYIETSAKTRQGVEDAFYTLVREIR 168 Query: 192 S 192 Sbjct: 169 Q 169 >5UHV-A nrPDB Length = 166 Score = 175 bits (443), Expect = 1e-44, Method: Composition-based stats. Identities = 40/165 (24%), Positives = 69/165 (41%), Gaps = 17/165 (10%) Query: 30 KTSLLMVFADGAFPESYTPTVFERYMVNLQVKGKPVHLHIWDTAGQDDYDRLRPLFYPDA 89 K++L + F + Y PT+ + Y + + G+ L I DTAGQ++Y +R + Sbjct: 16 KSALTIQLIQNHFVDEYDPTIEDSYRKQVVIDGETCLLDILDTAGQEEYSAMRDQYMRTG 75 Query: 90 SVLLLCFDVTSPNSFDNIFNRWYPEVNHF--CKKVPIIVVGCKTDLCKDKSLVNKLRRNG 147 L F + + SF +I N + ++ VP+++VG K DL Sbjct: 76 EGFLCVFAINNSKSFADI-NLYREQIKRVKDSDDVPMVLVGNKCDL-------------P 121 Query: 148 LEPVTYHRGQEMARSVGAVAYLECSARLHDNVHAVFQEAAEVALS 192 V + E+A+S G + ++E SA+ V F Sbjct: 122 TRTVDTKQAHELAKSYG-IPFIETSAKTRQGVEDAFYTLVREIRQ 165 >4KU4-A nrPDB Length = 206 Score = 175 bits (443), Expect = 2e-44, Method: Composition-based stats. Identities = 59/214 (27%), Positives = 91/214 (42%), Gaps = 37/214 (17%) Query: 13 PGVRSV--KVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMVNLQVKGKPVHLHIW 70 PG + K+ ++G+GG GKTSL + F E+Y PT+ + Y + G P HL I Sbjct: 8 PGAGKITDKIAMLGEGGVGKTSLTVNLTKHVFSETYDPTLEDSYRRQCVIDGIPSHLEIL 67 Query: 71 DTAGQDDYDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEV--------------- 115 DTAGQ++Y LR + + ++ FDVT +SF+ R + EV Sbjct: 68 DTAGQEEYGALREQWIRQNELFVIVFDVTRRSSFEAA-ERLFEEVIQTKRKLDETRRHPG 126 Query: 116 NHFCKKVP-----IIVVGCKTDLCKDKSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLE 170 + +P +++VG K DL + V G +A+ +G ++E Sbjct: 127 DRHPDDLPFAPSLVVLVGNKCDLDTRR------------EVGTLEGSSLAKKLG-CGFVE 173 Query: 171 CSARLHDNVHAVFQEAAEVALSSRGRNFWRRITQ 204 SA+L NV F A R R + Sbjct: 174 TSAKLGTNVEEAFFSVVR-ADRRRKREVTDEEQR 206 >2ERY-A nrPDB Length = 172 Score = 172 bits (436), Expect = 1e-43, Method: Composition-based stats. Identities = 48/169 (28%), Positives = 75/169 (44%), Gaps = 16/169 (9%) Query: 30 KTSLLMVFADGAFPESYTPTVFERYMVNLQVKGKPVHLHIWDTAGQDDYDRLRPLFYPDA 89 K++L + F F Y PT+ + Y + + L I DTAGQ+++ +R + Sbjct: 18 KSALTIQFIQSYFVTDYDPTIEDSYTKQCVIDDRAARLDILDTAGQEEFGAMREQYMRTG 77 Query: 90 SVLLLCFDVTSPNSFDNIFN--RWYPEVNHFCKKVPIIVVGCKTDLCKDKSLVNKLRRNG 147 LL F VT SF+ I+ R V + P+I++G K DL + Sbjct: 78 EGFLLVFSVTDRGSFEEIYKFQRQILRVKDR-DEFPMILIGNKADLDHQRQ--------- 127 Query: 148 LEPVTYHRGQEMARSVGAVAYLECSARLHDNVHAVFQEAAEVALSSRGR 196 VT GQ++AR + V Y+E SA++ NV F E V + + Sbjct: 128 ---VTQEEGQQLARQLK-VTYMEASAKIRMNVDQAFHELVRVIRKFQEQ 172 >5WDR-A nrPDB Length = 171 Score = 171 bits (435), Expect = 1e-43, Method: Composition-based stats. Identities = 43/165 (26%), Positives = 71/165 (43%), Gaps = 16/165 (9%) Query: 30 KTSLLMVFADGAFPESYTPTVFERYMVNLQVKGKPVHLHIWDTAGQDDYDRLRPLFYPDA 89 K++L + F Y PT+ + Y ++ + + L I DTAGQ+DY +R + Sbjct: 20 KSALTIQLIQQHFVTEYDPTIEDSYRKHVSIDDEACLLDILDTAGQEDYSAMRDQYMRTG 79 Query: 90 SVLLLCFDVTSPNSFDNI--FNRWYPEVNHFCKKVPIIVVGCKTDLCKDKSLVNKLRRNG 147 L + + S S D I F V +VP+I+VG K DL + + Sbjct: 80 EGFLCVYSIDSQQSLDEIHSFREQILRVKDQ-DEVPMILVGNKCDLEEHR---------- 128 Query: 148 LEPVTYHRGQEMARSVGAVAYLECSARLHDNVHAVFQEAAEVALS 192 V+ GQ +A+S ++ ++E SA+ NV F + Sbjct: 129 --EVSTEAGQAVAKSY-SIPFMETSAKKRINVEEAFYQLVREIRK 170 >5UWI-A nrPDB Length = 237 Score = 171 bits (435), Expect = 1e-43, Method: Composition-based stats. Identities = 50/183 (27%), Positives = 86/183 (46%), Gaps = 17/183 (9%) Query: 17 SVKVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFER-YMVNLQVKGKPVHLHIWDTAGQ 75 K+VLVGDGG GKT+ + G F + Y T+ + + P+ ++WDTAGQ Sbjct: 31 QFKLVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGPIKFNVWDTAGQ 90 Query: 76 DDYDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVNHFCKKVPIIVVGCKTDLCK 135 + + LR +Y A ++ FDVTS ++ N+ N W+ ++ C+ +PI++ G K D+ Sbjct: 91 EKFGGLRDGYYIQAQCAIIMFDVTSRVTYKNVPN-WHRDLVRVCENIPIVLCGNKVDIKD 149 Query: 136 DKSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNVHAVFQEAAEVALSSRG 195 R+ + + +HR + + Y + SA+ + N F A + Sbjct: 150 --------RKVKAKSIVFHRKKNL-------QYYDISAKSNYNFEKPFLWLARKLIGDPN 194 Query: 196 RNF 198 F Sbjct: 195 LEF 197 >5CLL-A nrPDB Length = 191 Score = 171 bits (435), Expect = 1e-43, Method: Composition-based stats. Identities = 50/183 (27%), Positives = 86/183 (46%), Gaps = 17/183 (9%) Query: 17 SVKVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFER-YMVNLQVKGKPVHLHIWDTAGQ 75 K+VLVGDGG GKT+ + G F + Y T+ + + P+ ++WDTAGQ Sbjct: 10 QFKLVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGPIKFNVWDTAGQ 69 Query: 76 DDYDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVNHFCKKVPIIVVGCKTDLCK 135 + + LR +Y A ++ FDVTS ++ N+ N W+ ++ C+ +PI++ G K D+ Sbjct: 70 EKFGGLRDGYYIQAQCAIIMFDVTSRVTYKNVPN-WHRDLVRVCENIPIVLCGNKVDIKD 128 Query: 136 DKSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNVHAVFQEAAEVALSSRG 195 R+ + + +HR + + Y + SA+ + N F A + Sbjct: 129 --------RKVKAKSIVFHRKKNL-------QYYDISAKSNYNFEKPFLWLARKLIGDPN 173 Query: 196 RNF 198 F Sbjct: 174 LEF 176 >2ATV-A nrPDB Length = 196 Score = 171 bits (434), Expect = 2e-43, Method: Composition-based stats. Identities = 49/188 (26%), Positives = 80/188 (42%), Gaps = 18/188 (9%) Query: 10 EAPPGVRSVKVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMVNLQVKGKPVHLHI 69 ++ VK+ + G G GK++L++ F F Y PT+ Y + + V + I Sbjct: 21 QSMAKSAEVKLAIFGRAGVGKSALVVRFLTKRFIWEYDPTLESTYRHQATIDDEVVSMEI 80 Query: 70 WDTAGQDDYDRLRPLFYPDASVLLLCFDVTSPNSFDNI--FNRWYPEVNHFCKKVPIIVV 127 DTAGQ+D R +L +D+T SF+ + E+ K V +I+V Sbjct: 81 LDTAGQED-TIQREGHMRWGEGFVLVYDITDRGSFEEVLPLKNILDEIKK-PKNVTLILV 138 Query: 128 GCKTDLCKDKSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHD-NVHAVFQEA 186 G K DL + V+ G+++A + A A+ ECSA + N+ +F E Sbjct: 139 GNKADLDHSRQ------------VSTEEGEKLATEL-ACAFYECSACTGEGNITEIFYEL 185 Query: 187 AEVALSSR 194 R Sbjct: 186 CREVRRRR 193 >4FMC-F nrPDB Length = 117 Score = 171 bits (433), Expect = 2e-43, Method: Composition-based stats. Identities = 41/116 (35%), Positives = 71/116 (61%), Gaps = 3/116 (2%) Query: 20 VVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMV-NLQVKGKPVHLHIWDTAGQDDY 78 ++L+GD G GK+ LL+ FAD + ESY T+ + + +++ GK + L IWDTAGQ+ + Sbjct: 1 LLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQERF 60 Query: 79 DRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVNHFC-KKVPIIVVGCKTDL 133 + +Y A +++ +DVT SF+N+ +W E++ + + V ++VG K DL Sbjct: 61 RTITSSYYRGAHGIIVVYDVTDQESFNNV-KQWLQEIDRYASENVNKLLVGNKCDL 115 >2FN4-A nrPDB Length = 181 Score = 170 bits (432), Expect = 3e-43, Method: Composition-based stats. Identities = 51/192 (26%), Positives = 80/192 (41%), Gaps = 16/192 (8%) Query: 9 EEAPPGVRSVKVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMVNLQVKGKPVHLH 68 PP + K+V+VG GG GK++L + F F Y PT+ + Y V G P L Sbjct: 1 SMDPPPSETHKLVVVGGGGVGKSALTIQFIQSYFVSDYDPTIEDSYTKICSVDGIPARLD 60 Query: 69 IWDTAGQDDYDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVNHFC--KKVPIIV 126 I DTAGQ+++ +R + LL F + SF+ + + + ++ P+++ Sbjct: 61 ILDTAGQEEFGAMREQYMRAGHGFLLVFAINDRQSFNEVG-KLFTQILRVKDRDDFPVVL 119 Query: 127 VGCKTDLCKDKSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNVHAVFQEA 186 VG K DL + V S VAY E SA+L NV F++ Sbjct: 120 VGNKADLESQRQ------------VPRSEASAFGASHH-VAYFEASAKLRLNVDEAFEQL 166 Query: 187 AEVALSSRGRNF 198 + + Sbjct: 167 VRAVRKYQEQEL 178 >1Z22-A nrPDB Length = 168 Score = 170 bits (431), Expect = 4e-43, Method: Composition-based stats. Identities = 48/178 (26%), Positives = 84/178 (47%), Gaps = 15/178 (8%) Query: 17 SVKVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYM-VNLQVKGKPVHLHIWDTAGQ 75 ++K+V+VG+G GK+S++ + G F + Y T+ ++ +QV + V L +WDTAGQ Sbjct: 5 AIKMVVVGNGAVGKSSMIQRYCKGIFTKDYKKTIGVDFLERQIQVNDEDVRLMLWDTAGQ 64 Query: 76 DDYDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVNHFCKKVPIIVVGCKTDLCK 135 +++D + +Y A +L F T SF+ I + W +V +P +V K DL Sbjct: 65 EEFDAITKAYYRGAQACVLVFSTTDRESFEAISS-WREKVVAEVGDIPTALVQNKIDLLD 123 Query: 136 DKSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNVHAVFQEAAEVALSS 193 D + + +A+ + + + S + NV VF+ AE L Sbjct: 124 D------------SCIKNEEAEGLAKRLK-LRFYRTSVKEDLNVSEVFKYLAEKHLQK 168 >3T5G-A nrPDB Length = 181 Score = 170 bits (431), Expect = 4e-43, Method: Composition-based stats. Identities = 56/197 (28%), Positives = 95/197 (48%), Gaps = 17/197 (8%) Query: 12 PPGVRSVKVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMVNLQVKGKPVHLHIWD 71 P +S K+ ++G GK+SL + F +G F +SY PT+ + + V G+ HL + D Sbjct: 1 MPQSKSRKIAILGYRSVGKSSLTIQFVEGQFVDSYDPTIENTFTKLITVNGQEYHLQLVD 60 Query: 72 TAGQDDYDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVNHFCK-KVPIIVVGCK 130 TAGQD+Y + D + +L + VTS SF+ I ++ K ++PI++VG K Sbjct: 61 TAGQDEYSIFPQTYSIDINGYILVYSVTSIKSFEVIKVIHGKLLDMVGKVQIPIMLVGNK 120 Query: 131 TDLCKDKSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNVHAVFQEAAEVA 190 DL ++ ++Y G+ +A S A A+LE SA+ + VF+ + Sbjct: 121 KDLHMER------------VISYEEGKALAESWNA-AFLESSAKENQTAVDVFR---RII 164 Query: 191 LSSRGRNFWRRITQGFC 207 L + + + C Sbjct: 165 LEAEKMDGACSQGKSSC 181 >3OES-A nrPDB Length = 201 Score = 166 bits (422), Expect = 5e-42, Method: Composition-based stats. Identities = 59/182 (32%), Positives = 87/182 (47%), Gaps = 14/182 (7%) Query: 10 EAPPGVRSVKVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMVNLQVKGKPVHLHI 69 + P VR KVV++G GKTSL F +G F E Y PTV Y + + HLH+ Sbjct: 17 QGMPLVRYRKVVILGYRCVGKTSLAHQFVEGEFSEGYDPTVENTYSKIVTLGKDEFHLHL 76 Query: 70 WDTAGQDDYDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYP-EVNHFCKKVPIIVVG 128 DTAGQD+Y L F +L + VTS +SF I + + H +VP+++VG Sbjct: 77 VDTAGQDEYSILPYSFIIGVHGYVLVYSVTSLHSFQVIESLYQKLHEGHGKTRVPVVLVG 136 Query: 129 CKTDLCKDKSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNVHAVFQEAAE 188 K DL ++ V G+++A S GA ++E SAR + +F + + Sbjct: 137 NKADLSPER------------EVQAVEGKKLAESWGA-TFMESSARENQLTQGIFTKVIQ 183 Query: 189 VA 190 Sbjct: 184 EI 185 >3PIR-A nrPDB Length = 183 Score = 166 bits (421), Expect = 5e-42, Method: Composition-based stats. Identities = 43/167 (25%), Positives = 75/167 (44%), Gaps = 17/167 (10%) Query: 30 KTSLLMVFADGAFPESYTPTVFERYMVNLQVKGKPVHLHIWDTAGQDDYDRLRPLFYPDA 89 K++L + F F Y PT+ + Y+ + ++ + L + DTAGQ+++ +R + Sbjct: 31 KSALTIQFFQKIFVPEYDPTIEDSYLKHTEIDNQWAILDVLDTAGQEEFSAMREQYMRTG 90 Query: 90 SVLLLCFDVTSPNSFDNI--FNRWYPEVNHFCKKVPIIVVGCKTDLCKDKSLVNKLRRNG 147 L+ + VT SF+++ F++ V + P+I+V K DL Sbjct: 91 DGFLIVYSVTDKASFEHVDRFHQLILRVKDR-ESFPMILVANKVDLMH------------ 137 Query: 148 LEPVTYHRGQEMARSVGAVAYLECSARL-HDNVHAVFQEAAEVALSS 193 L VT +G+EMA + Y+E SA+ NV F + V Sbjct: 138 LRKVTRDQGKEMATKYN-IPYIETSAKDPPLNVDKTFHDLVRVIRQQ 183 >3CBQ-A nrPDB Length = 195 Score = 161 bits (407), Expect = 2e-40, Method: Composition-based stats. Identities = 48/183 (26%), Positives = 77/183 (42%), Gaps = 16/183 (8%) Query: 18 VKVVLVGDGGCGKTSLLMVFADGAFPESYTP-TVFERYMVNLQVKGKPVHLHIWDTAGQD 76 KV+LVG+ G GK++L F ++ P + Y + V + V L ++D Q Sbjct: 24 FKVMLVGESGVGKSTLAGTFGGLQGDSAHEPENPEDTYERRIMVDKEEVTLVVYDIWEQG 83 Query: 77 DYD-RLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVNHFCK-KVPIIVVGCKTDLC 134 D LR L+ F VT SF + +P+I+VG K+DL Sbjct: 84 DAGGWLRDHCLQTGDAFLIVFSVTDRRSFSKVPETLLRLRAGRPHHDLPVILVGNKSDLA 143 Query: 135 KDKSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNVHAVFQEAAEVALSSR 194 + + V+ G+ +A ++ + ++E SA LH N +F+ A R Sbjct: 144 RSR------------EVSLEEGRHLAGTL-SCKHIETSAALHHNTRELFEGAVRQIRLRR 190 Query: 195 GRN 197 GRN Sbjct: 191 GRN 193 >2CJW-A nrPDB Length = 192 Score = 161 bits (407), Expect = 2e-40, Method: Composition-based stats. Identities = 42/194 (21%), Positives = 76/194 (39%), Gaps = 21/194 (10%) Query: 14 GVRSVKVVLVGDGGCGKTSLLMVF--ADGAFPESYTPTVFERYMVNLQVKGK---PVHLH 68 G+ +VVL+G+ G GK++L +F + + Y L V G+ + L Sbjct: 3 GMTYYRVVLIGEQGVGKSTLANIFAGVHDSMDSDCEVLGEDTYERTLMVDGESATIILLD 62 Query: 69 IWDTAGQDDYDRLRPLFYPDASVLLLCFDVTSPNSFDNIFN-RWYPEVNHFCKKVPIIVV 127 +W+ G++++ L L+ + +T SF+ R + +PII+V Sbjct: 63 MWENKGENEW--LHDHCMQVGDAYLIVYSITDRASFEKASELRIQLRRARQTEDIPIILV 120 Query: 128 GCKTDLCKDKSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNVHAVFQEAA 187 G K+DL + + V+ G+ A V ++E SA + NV +F+ Sbjct: 121 GNKSDLVRCR------------EVSVSEGRACA-VVFDCKFIETSAAVQHNVKELFEGIV 167 Query: 188 EVALSSRGRNFWRR 201 R Sbjct: 168 RQVRLRRDSKEKNE 181 >4CZ2-A nrPDB Length = 230 Score = 160 bits (406), Expect = 3e-40, Method: Composition-based stats. Identities = 36/181 (19%), Positives = 80/181 (44%), Gaps = 20/181 (11%) Query: 18 VKVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMVNLQ--VKGKPVHLHIWDTAGQ 75 KV+++G+ G GKTS++ + F + Y T+ + + + V L +WD AG Sbjct: 31 FKVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVLNWDSRTLVRLQLWDIAGL 90 Query: 76 DDYDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVN---HFCKKVPI--IVVGCK 130 + + + ++Y +A + FD++ ++F+ + +W +++ H PI +++ K Sbjct: 91 ERFGNMTRVYYKEAMGAFVVFDISRSSTFEAVL-KWKSDLDSKVHLPNGSPIPAVLLANK 149 Query: 131 TDLCKDKSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNVHAVFQEAAEVA 190 D +N ++ + + + G + E SA+ + N+ + E Sbjct: 150 CD------------QNKDSSMSPSQMDQFCKEHGFAGWFETSAKDNINIEEAARFLVEKM 197 Query: 191 L 191 L Sbjct: 198 L 198 >2G3Y-A nrPDB Length = 211 Score = 160 bits (405), Expect = 4e-40, Method: Composition-based stats. Identities = 42/191 (21%), Positives = 75/191 (39%), Gaps = 21/191 (10%) Query: 13 PGVRSVKVVLVGDGGCGKTSLLMVF--ADGAFPESYTPTVFERYMVNLQVKGK---PVHL 67 G +VVL+G+ G GK++L +F + + Y L V G+ + L Sbjct: 33 SGNTYYRVVLIGEQGVGKSTLANIFAGVHDSMDSDCEVLGEDTYERTLMVDGESATIILL 92 Query: 68 HIWDTAGQDDYDRLRPLFYPDASVLLLCFDVTSPNSFDNIFN-RWYPEVNHFCKKVPIIV 126 +W+ G++++ L L+ + +T SF+ R + +PII+ Sbjct: 93 DMWENKGENEW--LHDHCMQVGDAYLIVYSITDRASFEKASELRIQLRRARQTEDIPIIL 150 Query: 127 VGCKTDLCKDKSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNVHAVFQEA 186 VG K+DL + + V+ G+ A V ++E SA + NV +F+ Sbjct: 151 VGNKSDLVRCR------------EVSVSEGRACA-VVFDCKFIETSAAVQHNVKELFEGI 197 Query: 187 AEVALSSRGRN 197 R Sbjct: 198 VRQVRLRRDSK 208 >2GF0-A nrPDB Length = 199 Score = 158 bits (399), Expect = 2e-39, Method: Composition-based stats. Identities = 39/159 (24%), Positives = 69/159 (43%), Gaps = 16/159 (10%) Query: 30 KTSLLMVFADGAFPESYTPTVFERYMVNLQVKGKPVHLHIWDTAGQDDYDRLRPLFYPDA 89 K+SL++ F G F ++Y PT+ + Y + L I DT G + ++ L Sbjct: 21 KSSLVLRFVKGTFRDTYIPTIEDTYRQVISCDKSVCTLQITDTTGSHQFPAMQRLSISKG 80 Query: 90 SVLLLCFDVTSPNSFDNI--FNRWYPEVNHFCKKVPIIVVGCKTDLCKDKSLVNKLRRNG 147 +L F VTS S + + + ++ + +P+++VG K D Sbjct: 81 HAFILVFSVTSKQSLEELGPIYKLIVQIKGSVEDIPVMLVGNKCD-------------ET 127 Query: 148 LEPVTYHRGQEMARSVGAVAYLECSARLHDNVHAVFQEA 186 V Q +A+ A++E SA+++ NV +FQE Sbjct: 128 QREVDTREAQAVAQEWK-CAFMETSAKMNYNVKELFQEL 165 >3RAP-R nrPDB Length = 167 Score = 158 bits (399), Expect = 2e-39, Method: Composition-based stats. Identities = 43/162 (26%), Positives = 74/162 (45%), Gaps = 16/162 (9%) Query: 30 KTSLLMVFADGAFPESYTPTVFERYMVNLQVKGKPVHLHIWDTAGQDDYDRLRPLFYPDA 89 K++L + F G F E Y PT+ + Y ++V P L I DTAG + + +R L+ + Sbjct: 16 KSALTVQFVTGTFIEKYDPTIEDFYRKEIEVDSSPSVLEILDTAGTEQFASMRDLYIKNG 75 Query: 90 SVLLLCFDVTSPNSFDNIF--NRWYPEVNHFCKKVPIIVVGCKTDLCKDKSLVNKLRRNG 147 +L + + + SF +I V + +KVP+I+VG K DL ++ + + Sbjct: 76 QGFILVYSLVNQQSFQDIKPMRDQIIRVKRY-EKVPVILVGNKVDLESEREVSSSE---- 130 Query: 148 LEPVTYHRGQEMARSVGAVAYLECSARLHDNVHAVFQEAAEV 189 G+ +A G ++E SA+ V +F E Sbjct: 131 --------GRALAEEWG-CPFMETSAKSKTMVDELFAEIVRQ 163 >6FF8-A nrPDB Length = 181 Score = 157 bits (398), Expect = 3e-39, Method: Composition-based stats. Identities = 38/181 (20%), Positives = 80/181 (44%), Gaps = 20/181 (11%) Query: 18 VKVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMVNLQ--VKGKPVHLHIWDTAGQ 75 KV+++G+ G GKTS++ + F + Y T+ + + + V L +WD AG Sbjct: 9 FKVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVLNWDSRTLVRLQLWDIAGL 68 Query: 76 DDYDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVN---HFCKKVPI--IVVGCK 130 + + + ++Y +A + FD++ ++F+ + +W +++ H PI +++ K Sbjct: 69 ERFGNMTRVYYKEAVGAFVVFDISRSSTFEAVL-KWKSDLDSKVHLPNGSPIPAVLLANK 127 Query: 131 TDLCKDKSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNVHAVFQEAAEVA 190 D KD S + + + + G + E SA+ + N+ + E Sbjct: 128 CDQNKDSSQ------------SPSQVDQFCKEHGFAGWFETSAKDNINIEEAARFLVEKI 175 Query: 191 L 191 L Sbjct: 176 L 176 >3Q72-A nrPDB Length = 166 Score = 156 bits (394), Expect = 8e-39, Method: Composition-based stats. Identities = 45/178 (25%), Positives = 69/178 (38%), Gaps = 15/178 (8%) Query: 18 VKVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMVNLQVKGKPVHLHIWDTAGQDD 77 KV+L+G G GK++L +F Y ++ V G+ L ++D QD Sbjct: 3 YKVLLLGAPGVGKSALARIFGGVEDGPEAEA-AGHTYDRSIVVDGEEASLMVYDIWEQDG 61 Query: 78 YDRLRPLFYPDASVLLLCFDVTSPNSFDNIFN-RWYPEVNHFCKKVPIIVVGCKTDLCKD 136 L ++ + VT SF+ R VPII+VG K+DL + Sbjct: 62 GRWLPGHCMAMGDAYVIVYSVTDKGSFEKASELRVQLRRARQTDDVPIILVGNKSDLVRS 121 Query: 137 KSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNVHAVFQEAAEVALSSR 194 + V+ G+ A V ++E SA LH NV A+F+ R Sbjct: 122 R------------EVSVDEGRACA-VVFDCKFIETSAALHHNVQALFEGVVRQIRLRR 166 >4DJT-A nrPDB Length = 218 Score = 155 bits (392), Expect = 1e-38, Method: Composition-based stats. Identities = 53/176 (30%), Positives = 79/176 (44%), Gaps = 17/176 (9%) Query: 17 SVKVVLVGDGGCGKTSLLMVFADGAFPESYTPTVF--ERYMVNLQVKGKPVHLHIWDTAG 74 + K+ L+GDGG GKT+ + DG F ++Y TV + L +G + ++WDTAG Sbjct: 11 TYKICLIGDGGVGKTTYINRVLDGRFEKNYNATVGAVNHPVTFLDDQGNVIKFNVWDTAG 70 Query: 75 QDDYDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVNHFCKK-VPIIVVGCKTDL 133 Q+ L+ ++Y AS +L FDVTS + N+ RW E PI+V K D+ Sbjct: 71 QEKKAVLKDVYYIGASGAILFFDVTSRITCQNLA-RWVKEFQAVVGNEAPIVVCANKIDI 129 Query: 134 CKDKSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNVHAVFQEAAEV 189 + + KL L+ Y Y E SA+ N F A + Sbjct: 130 KNRQKISKKLVMEVLKGKNYE-------------YFEISAKTAHNFGLPFLHLARI 172 >3Q85-A nrPDB Length = 169 Score = 154 bits (390), Expect = 2e-38, Method: Composition-based stats. Identities = 44/181 (24%), Positives = 72/181 (39%), Gaps = 18/181 (9%) Query: 18 VKVVLVGDGGCGKTSLLMVF--ADGAFPESYTPTVFERYMVNLQVKGKPVHLHIWDTAGQ 75 KV+LVG+ G GK++L F G + Y + V + V L ++D Q Sbjct: 3 FKVMLVGESGVGKSTLAGTFGGLQGDHAHEME-NSEDTYERRIMVDKEEVTLIVYDIWEQ 61 Query: 76 DDYD-RLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVNHFCK-KVPIIVVGCKTDL 133 D L+ L+ F VT SF + +P+I+VG K+DL Sbjct: 62 GDAGGWLQDHCLQTGDAFLIVFSVTDRRSFSKVPETLLRLRAGRPHHDLPVILVGNKSDL 121 Query: 134 CKDKSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNVHAVFQEAAEVALSS 193 + + V+ G+ +A ++ + ++E SA LH N +F+ A Sbjct: 122 ARSR------------EVSLEEGRHLAGTL-SCKHIETSAALHHNTRELFEGAVRQIRLR 168 Query: 194 R 194 R Sbjct: 169 R 169 >5XC3-A nrPDB Length = 176 Score = 150 bits (378), Expect = 6e-37, Method: Composition-based stats. Identities = 44/175 (25%), Positives = 83/175 (47%), Gaps = 16/175 (9%) Query: 18 VKVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMVNLQV--KGKPVHLHIWDTAGQ 75 K++L+G G GK+S++ F + +PT+ + + GK + L+IWDTAGQ Sbjct: 6 YKIILIGSSGVGKSSIVHQFLFNRKISNVSPTIGAAFASKQVIAKNGKTLKLNIWDTAGQ 65 Query: 76 DDYDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVNHFCKKV-PIIVVGCKTDLC 134 + + + ++Y ++ L+ FDVT SFD+++ W ++ C I+VV K D+ Sbjct: 66 ERFRSITKMYYTNSLGCLVVFDVTDRESFDDVY-YWINDLRINCHTTYYILVVANKIDID 124 Query: 135 KDKSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNVHAVFQEAAEV 189 K+ V+ + ++ R Y+ S+ D V+ +F + + Sbjct: 125 KNNWR-----------VSENEIKKFCRD-NDCDYVFASSFESDTVNNLFGKMIDK 167 >2NZJ-A nrPDB Length = 175 Score = 150 bits (378), Expect = 6e-37, Method: Composition-based stats. Identities = 46/173 (26%), Positives = 72/173 (41%), Gaps = 16/173 (9%) Query: 15 VRSVKVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMVNLQVKGKPVHLHIWDTAG 74 + +VVL+GD G GKTSL +FA + + + Y L V G+ L + DT Sbjct: 2 MALYRVVLLGDPGVGKTSLASLFAGKQERDLHEQLGEDVYERTLTVDGEDTTLVVVDTWE 61 Query: 75 QDDYD--RLRPLFYPDASVLLLCFDVTSPNSFDNIFN-RWYPEVNHFCKKVPIIVVGCKT 131 + D + S ++ + + SF++ R H VPII+VG K Sbjct: 62 AEKLDKSWSQESCLQGGSAYVIVYSIADRGSFESASELRIQLRRTHQADHVPIILVGNKA 121 Query: 132 DLCKDKSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNVHAVFQ 184 DL + + V+ G+ A V ++E SA L NV +F+ Sbjct: 122 DLARCR------------EVSVEEGRACA-VVFDCKFIETSATLQHNVAELFE 161 >3E5H-A nrPDB Length = 178 Score = 146 bits (369), Expect = 6e-36, Method: Composition-based stats. Identities = 49/185 (26%), Positives = 83/185 (44%), Gaps = 20/185 (10%) Query: 13 PGVRSVKVVLVGDGGCGKTSLLMVFADGAFPESYTPTVF-ERYMVNLQVKGK-PVHLHIW 70 +R +K+V++GDG GKTSL FA F + Y T+ + ++ + + G V L IW Sbjct: 2 SHMRQLKIVVLGDGASGKTSLTTCFAQETFGKQYKQTIGLDFFLRRITLPGNLNVTLQIW 61 Query: 71 DTAGQDDYDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVNHFCKKVP----IIV 126 D GQ ++ + A +LL +D+T+ SF+N+ WY V ++ + + Sbjct: 62 DIGGQTIGGKMLDKYIYGAQGVLLVYDITNYQSFENL-EDWYTVVKKVSEESETQPLVAL 120 Query: 127 VGCKTDLCKDKSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNVHAVFQEA 186 VG K DL + + + + G ++ SA+ D+V FQ+ Sbjct: 121 VGNKIDLEH------------MRTIKPEKHLRFCQENGFSSHF-VSAKTGDSVFLCFQKV 167 Query: 187 AEVAL 191 A L Sbjct: 168 AAEIL 172 >3CLV-A nrPDB Length = 208 Score = 145 bits (366), Expect = 1e-35, Method: Composition-based stats. Identities = 43/218 (19%), Positives = 78/218 (35%), Gaps = 54/218 (24%) Query: 11 APPGVRSVKVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERY---------------- 54 S K VL+G+ GK+S+++ F E+ T+ + Sbjct: 1 GMEKKSSYKTVLLGESSVGKSSIVLRLTKDTFHENTNTTIGASFCTYVVNLNDINIKNNS 60 Query: 55 -------------MVNLQVKGK---------PVHLHIWDTAGQDDYDRLRPLFYPDASVL 92 N+ + + + IWDTAGQ+ Y + PL+Y A+ Sbjct: 61 NNEKNNNINSINDDNNVIITNQHNNYNENLCNIKFDIWDTAGQERYASIVPLYYRGATCA 120 Query: 93 LLCFDVTSPNSFDNIFNRWYPEVNHFCKKVPIIVVGCKTDLCKDKSLVNKLRRNGLEPVT 152 ++ FD+++ N+ D W ++ II+V K D V Sbjct: 121 IVVFDISNSNTLDRA-KTWVNQLK-ISSNYIIILVANKID-------------KNKFQVD 165 Query: 153 YHRGQEMARSVGAVAYLECSARLHDNVHAVFQEAAEVA 190 Q+ A+ + +++ SA+ N+ +F AE Sbjct: 166 ILEVQKYAQDNN-LLFIQTSAKTGTNIKNIFYMLAEEI 202 >3C5C-A nrPDB Length = 187 Score = 132 bits (332), Expect = 1e-31, Method: Composition-based stats. Identities = 51/194 (26%), Positives = 80/194 (41%), Gaps = 22/194 (11%) Query: 6 AAGEEAP--PGVRSVKVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMVNLQVKGK 63 ++G E G V + ++G G GK++L + F F Y P + + Y V + Sbjct: 8 SSGRENLYFQGPLEVNLAILGRRGAGKSALTVKFLTKRFISEYDPNLEDTYSSEETVDHQ 67 Query: 64 PVHLHIWDTAGQDDYD-RLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWY---PEVNHFC 119 PVHL + DTA D R L + A L+ + V S SFD+ + Sbjct: 68 PVHLRVMDTADLDTPRNCERYLNW--AHAFLVVYSVDSRQSFDSSSSYLELLALHAKETQ 125 Query: 120 KKVPIIVVGCKTDLCKDKSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLH-DN 178 + +P +++G K D+ + + VT G +A G + E SA L ++ Sbjct: 126 RSIPALLLGNKLDMAQYRQ------------VTKAEGVALAGRFG-CLFFEVSACLDFEH 172 Query: 179 VHAVFQEAAEVALS 192 V VF EA A Sbjct: 173 VQHVFHEAVREARR 186 >5C1S-A nrPDB Length = 391 Score = 128 bits (323), Expect = 1e-30, Method: Composition-based stats. Identities = 40/180 (22%), Positives = 75/180 (41%), Gaps = 21/180 (11%) Query: 14 GVRSVKVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMVNLQVKGKPVHLHIWDTA 73 G + +++++VG G GKT+L F ES+ E ++Q+ + + I D A Sbjct: 59 GKKEIRLLVVGSSGVGKTTLC-----DCFFESHQSQGEETREKHVQIDNDFIRISISDIA 113 Query: 74 GQDDYDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVNHFCK-KVPIIVVGCKTD 132 GQ + Y +L+ +D+T SF ++ W P++ +C II++G K D Sbjct: 114 GQQSFYAC-DNPYDGYDAILVMYDITELKSFTDLKTMWLPDIFLYCNIDTQIIIIGNKKD 172 Query: 133 LCKDKSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNVHAVFQEAAEVALS 192 D+ +T ++ A+ + E S + D+ +F + L Sbjct: 173 QEIDRI------------ITRKEAEQFAQD-RLCQFYEISTKD-DSCQLLFDCISRDFLQ 218 Score = 78.8 bits (193), Expect = 1e-15, Method: Composition-based stats. Identities = 37/183 (20%), Positives = 77/183 (42%), Gaps = 22/183 (12%) Query: 17 SVKVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFER---YMVNLQVKGKPVHLHIWDTA 73 +++++VGD GKT+ + FA PT + +++ + + D Sbjct: 222 KIRMLMVGDQNVGKTTFIRKFALQ------DPTGHDFMNAITTRFEMEKIKYEIIMIDWG 275 Query: 74 GQDDYDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVNHFCKKVPIIVVGCKTDL 133 + + P +L+ +D+T+ SF NI ++YP +N+ V ++VG KTDL Sbjct: 276 FYNKLLQTNPAISRTIEAILIVYDITNEESFQNIHRKYYPLINNKFSDVAGVIVGYKTDL 335 Query: 134 CKDKSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNVHAVFQEAAEVALSS 193 + +T +A +G Y+E S++ ++ ++ + A + Sbjct: 336 EAQRK------------ITMGDALTLADWLG-YKYVEMSSKDTEDHSSIIKALAHSIRIN 382 Query: 194 RGR 196 R + Sbjct: 383 RLK 385 >3IHW-A nrPDB Length = 184 Score = 126 bits (317), Expect = 7e-30, Method: Composition-based stats. Identities = 39/182 (21%), Positives = 78/182 (42%), Gaps = 17/182 (9%) Query: 16 RSVKVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMVNLQVKGKPVHLHIWDTAGQ 75 +KV +VG+ GK++L+ + G + + +P R+ + V G+ L I D G Sbjct: 19 PELKVGIVGNLSSGKSALVHRYLTGTYVQEESPEGG-RFKKEIVVDGQSYLLLIRDEGGP 77 Query: 76 DDYDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVN-HFCKKVPIIVVGCKTDLC 134 + L+ + DA V F + SF ++N + + +VP+++VG + Sbjct: 78 PE---LQFAAWVDAVVF--VFSLEDEISFQTVYNYFLRLCSFRNASEVPMVLVGTQ---- 128 Query: 135 KDKSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNVHAVFQEAAEVALSSR 194 + + + R ++++ + Y E A NV VFQ+ A+ ++ R Sbjct: 129 ------DAISAANPRVIDDSRARKLSTDLKRCTYYETCATYGLNVERVFQDVAQKVVALR 182 Query: 195 GR 196 + Sbjct: 183 KK 184 >6HLU-A nrPDB Length = 974 Score = 116 bits (292), Expect = 5e-27, Method: Composition-based stats. Identities = 43/191 (22%), Positives = 69/191 (36%), Gaps = 27/191 (14%) Query: 1 MTAAQAAGEEAPPGVRSVKVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMVN--- 57 + A++ GE A ++ +KV L+GDG GKTSLL F + T + Sbjct: 465 IEEARSKGE-ALVHLQEIKVHLIGDGMAGKTSLLKQLIGETFDPKESQTHGLNVVTKQAP 523 Query: 58 ----LQVKG--KPVHLHIWDTAGQDDYDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRW 111 L+ K H WD GQ+ F +SV +L D + D+ + W Sbjct: 524 NIKGLENDDELKECLFHFWDFGGQEIMHASHQFFMTRSSVYMLLLDSRT----DSNKHYW 579 Query: 112 YPEVNHFCKKVPIIVVGCKTDLCKDKSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLEC 171 + + K P+IVV K D ++ K + + Sbjct: 580 LRHIEKYGGKSPVIVVMNKIDENPSYNIEQKKINERFPAIENR-------------FHRI 626 Query: 172 SARLHDNVHAV 182 S + D V ++ Sbjct: 627 SCKNGDGVESI 637 >3DPU-A nrPDB Length = 535 Score = 116 bits (292), Expect = 5e-27, Method: Composition-based stats. Identities = 43/191 (22%), Positives = 69/191 (36%), Gaps = 27/191 (14%) Query: 1 MTAAQAAGEEAPPGVRSVKVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMVN--- 57 + A++ GE A ++ +KV L+GDG GKTSLL F + T + Sbjct: 26 IEEARSKGE-ALVHLQEIKVHLIGDGMAGKTSLLKQLIGETFDPKESQTHGLNVVTKQAP 84 Query: 58 ----LQVKG--KPVHLHIWDTAGQDDYDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRW 111 L+ K H WD GQ+ F +SV +L D + D+ + W Sbjct: 85 NIKGLENDDELKECLFHFWDFGGQEIMHASHQFFMTRSSVYMLLLDSRT----DSNKHYW 140 Query: 112 YPEVNHFCKKVPIIVVGCKTDLCKDKSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLEC 171 + + K P+IVV K D ++ K + + Sbjct: 141 LRHIEKYGGKSPVIVVMNKIDENPSYNIEQKKINERFPAIENR-------------FHRI 187 Query: 172 SARLHDNVHAV 182 S + D V ++ Sbjct: 188 SCKNGDGVESI 198 >2AL7-A nrPDB Length = 186 Score = 114 bits (287), Expect = 2e-26, Method: Composition-based stats. Identities = 37/173 (21%), Positives = 66/173 (38%), Gaps = 15/173 (8%) Query: 10 EAPPGVRS-VKVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMVNLQVKGKPVHLH 68 P G + +++ LVG GKT+ + V A G F E PTV + + KG V + Sbjct: 14 LVPRGSKEEMELTLVGLQYSGKTTFVNVIASGQFSEDMIPTVG--FNMRKVTKGN-VTIK 70 Query: 69 IWDTAGQDDYDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVNH-FCKKVPIIVV 127 IWD GQ + + + + ++ D + N + ++ + +P++V+ Sbjct: 71 IWDIGGQPRFRSMWERYCRGVNAIVYMIDAADREKIEASRNELHNLLDKPQLQGIPVLVL 130 Query: 128 GCKTDLCKDKSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNVH 180 G K DL + + L + Y S + DN+ Sbjct: 131 GNKRDLPNALDEKQLIEKMNLSAIQDRE---------ICCY-SISCKEKDNID 173 >4ILE-A nrPDB Length = 184 Score = 110 bits (276), Expect = 3e-25, Method: Composition-based stats. Identities = 35/167 (20%), Positives = 63/167 (37%), Gaps = 14/167 (8%) Query: 15 VRSVKVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMVNLQVKGKPVHLHIWDTAG 74 +++ LVG GKT+ + V A G F E PTV + + KG V + +WD G Sbjct: 20 KEEMELTLVGLQYSGKTTFVNVIASGQFNEDMIPTVG--FNMRKITKGN-VTIKLWDIGG 76 Query: 75 QDDYDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVNH-FCKKVPIIVVGCKTDL 133 Q + + + S ++ D + N + ++ + +P++V+G K DL Sbjct: 77 QPRFRSMWERYCRGVSAIVYMVDAADQEKIEASKNELHNLLDKPQLQGIPVLVLGNKRDL 136 Query: 134 CKDKSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNVH 180 + + L + Y S + DN+ Sbjct: 137 PGALDEKELIEKMNLSAIQDRE---------ICCY-SISCKEKDNID 173 >4WNR-A nrPDB Length = 349 Score = 107 bits (268), Expect = 3e-24, Method: Composition-based stats. Identities = 40/188 (21%), Positives = 61/188 (32%), Gaps = 21/188 (11%) Query: 8 GEEAPPGVRSVKVVLVGDGGCGKTSLLMVFADGAFP-ESYTPTVFERYMVNLQVKGKPVH 66 GE+ P + VKV+LVGDG GKTSLL F + + K K + Sbjct: 34 GEKKP--LNEVKVLLVGDGEAGKTSLLKRLLGEGFDGNEHQTQGINIKKWGFKDKDKEIK 91 Query: 67 LHIWDTAGQDDYDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVNHFCKKVPIIV 126 ++ WD GQ+ F S+ +L D D W + F P++V Sbjct: 92 VNFWDFGGQEIMHATHQFFLSKRSLYILVLDSRR----DEKAEYWLKHIRSFGGDSPVLV 147 Query: 127 VGCKTDLCKDKSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNVHAVFQEA 186 K D L K + + + S + + Q+ Sbjct: 148 ALNKIDENPSFELNRKFLQEKYPSIK--------------GFFRISCKEDRGIEGFSQKL 193 Query: 187 AEVALSSR 194 + L Sbjct: 194 KKELLKVE 201 >3D6T-B nrPDB Length = 171 Score = 107 bits (268), Expect = 3e-24, Method: Composition-based stats. Identities = 29/138 (21%), Positives = 59/138 (42%), Gaps = 14/138 (10%) Query: 18 VKVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMVNLQVKGKPVH----------L 67 +K+++VG+ G GKT+LL + + V + VK P+ L Sbjct: 1 MKLMIVGNTGSGKTTLLQQLMK----TKKSDLGMQSATVGIDVKDWPIQIRDKRKRDLVL 56 Query: 68 HIWDTAGQDDYDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVNHFCKKVPIIVV 127 ++WD AG++++ P F ++ L +D++ + + W + P+I+V Sbjct: 57 NVWDFAGREEFYSTHPHFMTQRALYLAVYDLSKGQAEVDAMKPWLFNIKARASSSPVILV 116 Query: 128 GCKTDLCKDKSLVNKLRR 145 G D+ +K + + Sbjct: 117 GTHLDVSDEKQRKACMSK 134 >2IWR-A nrPDB Length = 178 Score = 101 bits (253), Expect = 2e-22, Method: Composition-based stats. Identities = 38/189 (20%), Positives = 75/189 (39%), Gaps = 19/189 (10%) Query: 12 PPGVRSVKVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMVNLQVKGKPVHLHIWD 71 + +++ ++GD GK+SL+ F G++ + T E+Y + V G+ + I + Sbjct: 2 MRSIPELRLGVLGDARSGKSSLIHRFLTGSY-QVLEKTESEQYKKEMLVDGQTHLVLIRE 60 Query: 72 TAGQDDYDRLRPLFYPDASVLLLCFDVTSPNSFDNIFN---RWYPEVNHFCKKVPIIVVG 128 AG D F A ++ F + NSF + + + + +VG Sbjct: 61 EAGAPDAK-----FSGWADAVIFVFSLEDENSFQAVSRLHGQLSSLRGEGRGGLALALVG 115 Query: 129 CKTDLCKDKSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNVHAVFQEAAE 188 + +++ + V R + + + +Y E A NV VFQE A+ Sbjct: 116 TQ----------DRISASSPRVVGDARARALCADMKRCSYYETCATYGLNVDRVFQEVAQ 165 Query: 189 VALSSRGRN 197 ++ R + Sbjct: 166 KVVTLRKQQ 174 >4C0K-A nrPDB Length = 423 Score = 92.3 bits (228), Expect = 1e-19, Method: Composition-based stats. Identities = 30/129 (23%), Positives = 59/129 (45%), Gaps = 16/129 (12%) Query: 18 VKVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMVNL-------QVKGKPVHLHIW 70 K ++G G GKT + G E + + + N+ QV G+ HL + Sbjct: 247 YKCHVIGPKGSGKTGM----CRGFLVEDMHKLIGKEFKTNVVNCINSVQVYGQEKHLILR 302 Query: 71 DTAGQDDYDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVNHFCK-KVPIIVVGC 129 D + D L+P + V L +D ++P SF+ + + + ++ + K+P+++VG Sbjct: 303 DIDVRHALDPLQPQEV-NCDVACLVYDSSNPRSFEYVARIY---IKYYAESKIPVMIVGT 358 Query: 130 KTDLCKDKS 138 K D+ + + Sbjct: 359 KCDMDERRQ 367 >2YC4-C nrPDB Length = 208 Score = 87.2 bits (215), Expect = 5e-18, Method: Composition-based stats. Identities = 38/165 (23%), Positives = 66/165 (40%), Gaps = 22/165 (13%) Query: 18 VKVVLVGDGGCGKTSLLMVFADG--AFPESYTPTVFERYMVN-LQVKGKPV--HLHIWDT 72 KV +VG+ GK++L+ +F F + Y T +V + + V L + DT Sbjct: 21 CKVAVVGEATVGKSALISMFTSKGSKFLKDYAMTSGVEVVVAPVTIPDTTVSVELFLLDT 80 Query: 73 AGQDDYDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVNHFCKK----VPIIVVG 128 AG D Y ++ +L FDV+S SF++ W+ + + ++V Sbjct: 81 AGSDLYKEQISQYWNGVYYAILVFDVSSMESFESC-KAWFELLKSARPDRERPLRAVLVA 139 Query: 129 CKTDLCKDKSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSA 173 KTDL + V Q+ A + + + + SA Sbjct: 140 NKTDLPPQRH-----------QVRLDMAQDWATT-NTLDFFDVSA 172 >3LVQ-E nrPDB Length = 497 Score = 86.1 bits (212), Expect = 1e-17, Method: Composition-based stats. Identities = 32/151 (21%), Positives = 58/151 (38%), Gaps = 6/151 (3%) Query: 2 TAAQAAGEEAPPGVRSVKVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMVNLQVK 61 TA+ + G E + ++++++G GKT++L G + PTV + V Sbjct: 308 TASNSPGIEGLS-NKEMRILMLGLDAAGKTTILYKLKLGQSVTT-IPTVG--FNVETVTY 363 Query: 62 GKPVHLHIWDTAGQDDYDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEV-NHFCK 120 K V ++WD GQD L +Y L+ D + D + + + + Sbjct: 364 -KNVKFNVWDVGGQDKIRPLWRHYYTGTQGLIFVVDCADRDRIDEARQELHRIINDREMR 422 Query: 121 KVPIIVVGCKTDLCKDKSLVNKLRRNGLEPV 151 I++ K DL + GL + Sbjct: 423 DAIILIFANKQDLPDAMKPHEIQEKLGLTRI 453 >4YLG-A nrPDB Length = 173 Score = 83.8 bits (206), Expect = 5e-17, Method: Composition-based stats. Identities = 33/164 (20%), Positives = 62/164 (37%), Gaps = 16/164 (9%) Query: 14 GVRSVKVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMVNLQVKGKPVHLHIWDTA 73 G + +++++VG GKTS+L G + PT+ + V V+ K + +WD Sbjct: 10 GKKEMRILMVGLDAAGKTSILYKLKLGEIVTT-IPTIG--FNVE-TVEYKNISFTVWDVG 65 Query: 74 GQDDYDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVNHFCKKVPIIVV-GCKTD 132 GQD L +Y + ++ D + +N + I++V K D Sbjct: 66 GQDKIRPLWRHYYQNTQAIIFVVDSNDRDRIGEAREELMKMLNEDEMRNAILLVFANKHD 125 Query: 133 LCKDKSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLH 176 L + S+ + GL+ + Y + S + Sbjct: 126 LPQAMSISEVTEKLGLQTIK-----------NRKWYCQTSCATN 158 >2H16-A nrPDB Length = 183 Score = 81.9 bits (201), Expect = 2e-16, Method: Composition-based stats. Identities = 27/148 (18%), Positives = 58/148 (39%), Gaps = 6/148 (4%) Query: 10 EAPPGV-RSVKVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMVNLQVKGKPVHLH 68 P G + KV++VG GKT++L F+ + +PT+ + + + Sbjct: 14 LVPRGSHQEHKVIIVGLDNAGKTTILYQFSMNEVVHT-SPTIGSN-VEEIVINNT--RFL 69 Query: 69 IWDTAGQDDYDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVNHFC-KKVPIIVV 127 +WD GQ+ +Y + +++ D T Y + H +K +++ Sbjct: 70 MWDIGGQESLRSSWNTYYTNTEFVIVVVDSTDRERISVTREELYKMLAHEDLRKAGLLIF 129 Query: 128 GCKTDLCKDKSLVNKLRRNGLEPVTYHR 155 K D+ + ++ + L + H+ Sbjct: 130 ANKQDVKECMTVAEISQFLKLTSIKDHQ 157 >2A5F-A nrPDB Length = 175 Score = 81.5 bits (200), Expect = 3e-16, Method: Composition-based stats. Identities = 29/139 (20%), Positives = 53/139 (38%), Gaps = 5/139 (3%) Query: 14 GVRSVKVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMVNLQVKGKPVHLHIWDTA 73 G + ++++++G GKT++L G + PTV + V K V ++WD Sbjct: 10 GNKEMRILMLGLDAAGKTTILYKLKLGQSVTT-IPTVG--FNVETVTY-KNVKFNVWDVG 65 Query: 74 GQDDYDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEV-NHFCKKVPIIVVGCKTD 132 GQD L +Y L+ D + D + + + + I++ K D Sbjct: 66 GQDKIRPLWRHYYTGTQGLIFVVDCADRDRIDEARQELHRIINDREMRDAIILIFANKQD 125 Query: 133 LCKDKSLVNKLRRNGLEPV 151 L + GL + Sbjct: 126 LPDAMKPHEIQEKLGLTRI 144 >1YZG-A nrPDB Length = 179 Score = 79.9 bits (196), Expect = 8e-16, Method: Composition-based stats. Identities = 28/140 (20%), Positives = 53/140 (37%), Gaps = 5/140 (3%) Query: 16 RSVKVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMVNLQVKGKPVHLHIWDTAGQ 75 + KV++VG GKT++L F + +PT+ + + VK H +WD GQ Sbjct: 15 QEHKVIIVGLDNAGKTTILYQFLMNEVVHT-SPTIGSN-VEEIVVKNT--HFLMWDIGGQ 70 Query: 76 DDYDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVNHFC-KKVPIIVVGCKTDLC 134 + +Y + ++L D Y + H +K +++ K D+ Sbjct: 71 ESLRSSWNTYYSNTEFIILVVDSIDRERLAITKEELYRMLAHEDLRKAAVLIFANKQDMK 130 Query: 135 KDKSLVNKLRRNGLEPVTYH 154 + + L + H Sbjct: 131 GCMTAAEISKYLTLSSIKDH 150 >6BBQ-A nrPDB Length = 520 Score = 79.2 bits (194), Expect = 1e-15, Method: Composition-based stats. Identities = 28/139 (20%), Positives = 52/139 (37%), Gaps = 5/139 (3%) Query: 14 GVRSVKVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMVNLQVKGKPVHLHIWDTA 73 G + ++++++G GKT++L G + PTV + V K V ++WD Sbjct: 356 GNKEMRILMLGLDAAGKTTILYKLKLGQSVTT-IPTVG--FNVETVTY-KNVKFNVWDVG 411 Query: 74 GQDDYDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEV-NHFCKKVPIIVVGCKTD 132 G D L +Y L+ D + D + + + + I++ K D Sbjct: 412 GLDKIRPLWRHYYTGTQGLIFVVDCADRDRIDEARQELHRIINDREMRDAIILIFANKQD 471 Query: 133 LCKDKSLVNKLRRNGLEPV 151 L + GL + Sbjct: 472 LPDAMKPHEIQEKLGLTRI 490 >1Z6X-A nrPDB Length = 180 Score = 78.4 bits (192), Expect = 2e-15, Method: Composition-based stats. Identities = 26/138 (18%), Positives = 55/138 (39%), Gaps = 5/138 (3%) Query: 14 GVRSVKVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMVNLQVKGKPVHLHIWDTA 73 G + +++++VG GKT++L G + PT+ + V V+ K + +WD Sbjct: 14 GKKQMRILMVGLDAAGKTTILYKLKLGEIVTT-IPTIG--FNVE-TVEYKNICFTVWDVG 69 Query: 74 GQDDYDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPE-VNHFCKKVPIIVVGCKTD 132 GQD L ++ + L+ D + + + + +++ K D Sbjct: 70 GQDRIRPLWKHYFQNTQGLIFVVDSNDRERIQEVADELQKMLLVDELRDAVLLLFANKQD 129 Query: 133 LCKDKSLVNKLRRNGLEP 150 L ++ + GL+ Sbjct: 130 LPNAMAISEMTDKLGLQS 147 >3O47-A nrPDB Length = 329 Score = 78.4 bits (192), Expect = 2e-15, Method: Composition-based stats. Identities = 27/139 (19%), Positives = 52/139 (37%), Gaps = 5/139 (3%) Query: 11 APPGVRSVKVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMVNLQVKGKPVHLHIW 70 G + +++++VG GKT++L G + PT+ + V V+ K + +W Sbjct: 159 GLFGKKEMRILMVGLDAAGKTTILYKLKLGEIVTT-IPTIG--FNVE-TVEYKNISFTVW 214 Query: 71 DTAGQDDYDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVNHFC-KKVPIIVVGC 129 D GQD L ++ + L+ D + + + ++V Sbjct: 215 DVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERVNEAREELMRMLAEDELRDAVLLVFAN 274 Query: 130 KTDLCKDKSLVNKLRRNGL 148 K DL + + GL Sbjct: 275 KQDLPNAMNAAEITDKLGL 293 >5NZV-F nrPDB Length = 181 Score = 78.0 bits (191), Expect = 3e-15, Method: Composition-based stats. Identities = 30/139 (21%), Positives = 55/139 (39%), Gaps = 5/139 (3%) Query: 14 GVRSVKVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMVNLQVKGKPVHLHIWDTA 73 G + +++++VG G GKT++L G + PT+ + V V+ K + +WD Sbjct: 14 GNKEMRILMVGLDGAGKTTVLYKLKLGEVITT-IPTIG--FNVE-TVQYKNISFTVWDVG 69 Query: 74 GQDDYDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVNHFC-KKVPIIVVGCKTD 132 GQD L +Y + ++ D + +N + +V K D Sbjct: 70 GQDRIRSLWRHYYRNTEGVIFVVDSNDRSRIGEAREVMQRMLNEDELRNAAWLVFANKQD 129 Query: 133 LCKDKSLVNKLRRNGLEPV 151 L + S + GL + Sbjct: 130 LPEAMSAAEITEKLGLHSI 148 >3LRP-A nrPDB Length = 181 Score = 77.6 bits (190), Expect = 3e-15, Method: Composition-based stats. Identities = 32/138 (23%), Positives = 55/138 (39%), Gaps = 5/138 (3%) Query: 15 VRSVKVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMVNLQVKGKPVHLHIWDTAG 74 + V++++VG GKT++L G + PT+ + V V+ + + +WD G Sbjct: 15 KKDVRILMVGLDAAGKTTILYKVKLGEVVTT-IPTIG--FNVE-TVEFRNISFTVWDVGG 70 Query: 75 QDDYDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVNHFCKKVPIIVV-GCKTDL 133 QD L +Y + L+ D D+ + +N K II+V K DL Sbjct: 71 QDKIRPLWRHYYSNTDGLIFVVDSNDRERIDDAREELHRMINEEELKDAIILVFANKQDL 130 Query: 134 CKDKSLVNKLRRNGLEPV 151 S + L + Sbjct: 131 PNAMSAAEVTEKLHLNTI 148 >2B6H-A nrPDB Length = 192 Score = 76.1 bits (186), Expect = 1e-14, Method: Composition-based stats. Identities = 26/137 (18%), Positives = 53/137 (38%), Gaps = 5/137 (3%) Query: 14 GVRSVKVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMVNLQVKGKPVHLHIWDTA 73 G + +++++VG GKT++L G + PT+ + V V+ K + +WD Sbjct: 26 GKKQMRILMVGLDAAGKTTILYKLKLGEIVTT-IPTIG--FNVE-TVEYKNICFTVWDVG 81 Query: 74 GQDDYDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVNHFC-KKVPIIVVGCKTD 132 GQD L ++ + L+ D + + + ++V K D Sbjct: 82 GQDKIRPLWRHYFQNTQGLIFVVDSNDRERVQESADELQKMLQEDELRDAVLLVFANKQD 141 Query: 133 LCKDKSLVNKLRRNGLE 149 + + + GL+ Sbjct: 142 MPNAMPVSELTDKLGLQ 158 >6FAE-B nrPDB Length = 213 Score = 75.7 bits (185), Expect = 1e-14, Method: Composition-based stats. Identities = 27/134 (20%), Positives = 52/134 (38%), Gaps = 5/134 (3%) Query: 16 RSVKVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMVNLQVKGKPVHLHIWDTAGQ 75 +S+++++VG GKT++L G + PT+ + V V+ K + +WD GQ Sbjct: 48 QSMRILMVGLDAAGKTTILYKLKLGEIVTT-IPTIG--FNVE-TVEYKNISFTVWDVGGQ 103 Query: 76 DDYDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVNHFC-KKVPIIVVGCKTDLC 134 D L ++ + L+ D + + + ++V K DL Sbjct: 104 DKIRPLWRHYFQNTQGLIFVVDSNDRERVNEAREELMRMLAEDELRDAVLLVFANKQDLP 163 Query: 135 KDKSLVNKLRRNGL 148 + + GL Sbjct: 164 NAMNAAEITDKLGL 177 >5UF8-A nrPDB Length = 181 Score = 75.3 bits (184), Expect = 2e-14, Method: Composition-based stats. Identities = 27/139 (19%), Positives = 55/139 (39%), Gaps = 5/139 (3%) Query: 14 GVRSVKVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMVNLQVKGKPVHLHIWDTA 73 G + +++++VG GKT++L G + PT+ + V V+ K + +WD Sbjct: 14 GNKEMRILMVGLDAAGKTTILYKLKLGEIVTT-IPTIG--FNVE-TVEYKNISFTVWDVG 69 Query: 74 GQDDYDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVNHFCKKVPIIVV-GCKTD 132 GQD L ++ + ++ D + +N + +++V K D Sbjct: 70 GQDKIRPLWRYYFQNTQGIIFVVDSNDRDRIAEAREELQQMLNEDELRDALLLVFANKQD 129 Query: 133 LCKDKSLVNKLRRNGLEPV 151 L + + GL + Sbjct: 130 LPNAMNAAEITEKLGLHSI 148 >3AQ4-A nrPDB Length = 184 Score = 74.5 bits (182), Expect = 3e-14, Method: Composition-based stats. Identities = 27/136 (19%), Positives = 54/136 (39%), Gaps = 5/136 (3%) Query: 14 GVRSVKVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMVNLQVKGKPVHLHIWDTA 73 + +++++VG GKT++L G + PT+ + V V+ K + +WD Sbjct: 17 AKKEMRILMVGLDAAGKTTILYKLKLGEIVTT-IPTIG--FNVE-TVEYKNISFTVWDVG 72 Query: 74 GQDDYDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVNHFC-KKVPIIVVGCKTD 132 GQD L ++ + L+ D + + + +N + ++V K D Sbjct: 73 GQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQD 132 Query: 133 LCKDKSLVNKLRRNGL 148 L + + GL Sbjct: 133 LPNAMNAAEITDKLGL 148 >4ZI3-A nrPDB Length = 190 Score = 74.5 bits (182), Expect = 3e-14, Method: Composition-based stats. Identities = 32/167 (19%), Positives = 55/167 (32%), Gaps = 15/167 (8%) Query: 16 RSVKVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMVNLQVKGKPVHLHIWDTAGQ 75 + V+++L+G GKT+LL A TPT V+ + L++WD GQ Sbjct: 16 QEVRILLLGLDNAGKTTLLKQLAS-EDISHITPTQGFNIK---SVQSQGFKLNVWDIGGQ 71 Query: 76 DDYDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVNHFCKK-VPIIVVGCKTDLC 134 ++ + +L+ D F+ + VP+++ K DL Sbjct: 72 RKIRPYWRSYFENTDILIYVIDSADRKRFEETGQELTELLEEEKLSCVPVLIFANKQDLL 131 Query: 135 KDKSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNVHA 181 L + V + CSA + V Sbjct: 132 TAAPASEIAEGLNLHTI--------RDRVWQIQ--SCSALTGEGVQD 168 >6DFF-C nrPDB Length = 193 Score = 72.6 bits (177), Expect = 1e-13, Method: Composition-based stats. Identities = 25/133 (18%), Positives = 49/133 (36%), Gaps = 5/133 (3%) Query: 17 SVKVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMVNLQVKGKPVHLHIWDTAGQD 76 +++++VG GKT++L G + PT+ + V V+ K + +WD G D Sbjct: 29 EMRILMVGLDAAGKTTILYKLKLGEIVTT-IPTIG--FNVE-TVEYKNISFTVWDVGGLD 84 Query: 77 DYDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVNHFC-KKVPIIVVGCKTDLCK 135 L ++ + L+ D + + + ++V K DL Sbjct: 85 KIRPLWRHYFQNTQGLIFVVDSNDRERVNEAREELMRMLAEDELRDAVLLVFANKQDLPN 144 Query: 136 DKSLVNKLRRNGL 148 + + GL Sbjct: 145 AMNAAEITDKLGL 157 >5EE5-B nrPDB Length = 171 Score = 72.6 bits (177), Expect = 1e-13, Method: Composition-based stats. Identities = 28/180 (15%), Positives = 59/180 (32%), Gaps = 15/180 (8%) Query: 16 RSVKVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMVNLQVKGKPVHLHIWDTAGQ 75 R ++++++G G GKT++L G + PT+ + V K + +WD G Sbjct: 6 REMRILILGLDGAGKTTILYRLQVGEVVTT-IPTIG--FNVETVTY-KNLKFQVWDLGGL 61 Query: 76 DDYDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVNHFCKKVPIIVV-GCKTDLC 134 +Y + ++ D + + + + I+VV K D+ Sbjct: 62 TSIRPYWRCYYSNTDAVIYVVDSCDRDRIGISKSELVAMLEEEELRKAILVVFANKQDME 121 Query: 135 KDKSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNVHAVFQEAAEVALSSR 194 + + GL + + + SA + + E S + Sbjct: 122 QAMTSSEMANSLGLP--------ALKDRKWQI--FKTSATKGTGLDEAMEWLVETLKSRQ 171 >1J2J-A nrPDB Length = 166 Score = 72.2 bits (176), Expect = 2e-13, Method: Composition-based stats. Identities = 26/133 (19%), Positives = 50/133 (37%), Gaps = 5/133 (3%) Query: 17 SVKVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMVNLQVKGKPVHLHIWDTAGQD 76 S+++++VG GKT++L G + PT+ + V V+ K + +WD G D Sbjct: 2 SMRILMVGLDAAGKTTILYKLKLGEIVTT-IPTIG--FNVE-TVEYKNISFTVWDVGGLD 57 Query: 77 DYDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVNHFC-KKVPIIVVGCKTDLCK 135 L ++ + L+ D + + + ++V K DL Sbjct: 58 KIRPLWRHYFQNTQGLIFVVDSNDRERVNEAREELMRMLAEDELRDAVLLVFANKQDLPN 117 Query: 136 DKSLVNKLRRNGL 148 + + GL Sbjct: 118 AMNAAEITDKLGL 130 >3BH6-A nrPDB Length = 164 Score = 71.5 bits (174), Expect = 2e-13, Method: Composition-based stats. Identities = 32/169 (18%), Positives = 54/169 (31%), Gaps = 15/169 (8%) Query: 14 GVRSVKVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMVNLQVKGKPVHLHIWDTA 73 G V+++L+G GKT+LL A TPT V+ + L++WD Sbjct: 1 GGSEVRILLLGLDNAGKTTLLKQLAS-EDISHITPTQGFNIK---SVQSQGFKLNVWDIG 56 Query: 74 GQDDYDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVNHFCKK-VPIIVVGCKTD 132 G ++ + +L+ D F+ + VP+++ K D Sbjct: 57 GLRKIRPYWRSYFENTDILIYVIDSADRKRFEETGQELTELLEEEKLSCVPVLIFANKQD 116 Query: 133 LCKDKSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNVHA 181 L L + V + CSA + V Sbjct: 117 LLTAAPASEIAEGLNLHTI--------RDRVWQIQ--SCSALTGEGVQD 155 >2H57-A nrPDB Length = 190 Score = 69.5 bits (169), Expect = 9e-13, Method: Composition-based stats. Identities = 31/151 (20%), Positives = 59/151 (39%), Gaps = 15/151 (9%) Query: 10 EAPPGVRSVKVVLVGDGGCGKTSLLMVFA-DGAFPESYTPTVFERYMVNLQVKGKPVHLH 68 P G + V V+ +G GKT+++ A ++ PT+ K + Sbjct: 14 LVPRGSKEVHVLCLGLDNSGKTTIINKLKPSNAQSQNILPTIGFSIEK---FKSSSLSFT 70 Query: 69 IWDTAGQDDYDRLRPLFYPDASVLLLCFDVTSP-------NSFDNIFNRWYPEVNHFCKK 121 ++D +GQ Y L +Y + ++ D + D + N P++ H ++ Sbjct: 71 VFDMSGQGRYRNLWEHYYKEGQAIIFVIDSSDRLRMVVAKEELDTLLNH--PDIKH--RR 126 Query: 122 VPIIVVGCKTDLCKDKSLVNKLRRNGLEPVT 152 +PI+ K DL + V + LE + Sbjct: 127 IPILFFANKMDLRDAVTSVKVSQLLCLENIK 157 >1MOZ-A nrPDB Length = 183 Score = 68.4 bits (166), Expect = 2e-12, Method: Composition-based stats. Identities = 23/118 (19%), Positives = 49/118 (41%), Gaps = 5/118 (4%) Query: 16 RSVKVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMVNLQVKGKPVHLHIWDTAGQ 75 + ++++++G G GKT++L G + PT+ + V + K + L++WD GQ Sbjct: 17 KELRILILGLDGAGKTTILYRLQIGEVVTT-KPTIG--FNVE-TLSYKNLKLNVWDLGGQ 72 Query: 76 DDYDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVNHFC-KKVPIIVVGCKTD 132 +Y D + ++ D T + + + + ++V K D Sbjct: 73 TSIRPYWRCYYADTAAVIFVVDSTDKDRMSTASKELHLMLQEEELQDAALLVFANKQD 130 >1KSG-A nrPDB Length = 186 Score = 67.6 bits (164), Expect = 3e-12, Method: Composition-based stats. Identities = 21/119 (17%), Positives = 46/119 (38%), Gaps = 5/119 (4%) Query: 16 RSVKVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMVNLQVKGKPVHLHIWDTAGQ 75 R ++++++G GKT++L F +G ++ +PT+ ++ + L+IWD GQ Sbjct: 17 RELRLLMLGLDNAGKTTILKKF-NGEDVDTISPTLGFNIK---TLEHRGFKLNIWDVGGQ 72 Query: 76 DDYDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEV-NHFCKKVPIIVVGCKTDL 133 ++ L+ D + + +++ K DL Sbjct: 73 KSLRSYWRNYFESTDGLIWVVDSADRQRMQDCQRELQSLLVEERLAGATLLIFANKQDL 131 >4V0N-A nrPDB Length = 169 Score = 64.9 bits (157), Expect = 2e-11, Method: Composition-based stats. Identities = 32/142 (22%), Positives = 55/142 (38%), Gaps = 5/142 (3%) Query: 13 PGVRSVKVVLVGDGGCGKTSLLMVFA-DGAFPESYTPTVFERYMVNLQVKGKPVHLHIWD 71 + V V++VG GKT+++ PTV + V+ KG P+ ++D Sbjct: 2 AASKKVNVLVVGLDNSGKTTIIERLKPRPRQAAEVAPTVG--FTVDEVEKG-PLTFTVFD 58 Query: 72 TAGQDDYDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVNHFC-KKVPIIVVGCK 130 +G Y L +Y +A ++ D + + H +KVPI+ K Sbjct: 59 MSGAGRYRTLWEQYYREADAVVFVVDSADKLRMVVARDEMEHMLKHSNMRKVPILYFANK 118 Query: 131 TDLCKDKSLVNKLRRNGLEPVT 152 DL V + GL+ + Sbjct: 119 KDLPVAMPPVEIAQALGLDDIK 140 >5DE3-A nrPDB Length = 169 Score = 60.7 bits (146), Expect = 5e-10, Method: Composition-based stats. Identities = 30/164 (18%), Positives = 53/164 (32%), Gaps = 15/164 (9%) Query: 19 KVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMVNLQVKGKPVHLHIWDTAGQDDY 78 +++++G GKT++L ++ + TPT + +L G +L IWD GQ Sbjct: 2 RILVLGLDNAGKTTILKALSE-EDITTITPTQGFN-IKSLSRDG--FNLKIWDIGGQKSI 57 Query: 79 DRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVNHFC-KKVPIIVVGCKTDLCKDK 137 ++ L+ D + VP++V K DL Sbjct: 58 RPYWRNYFDQTDALIYVIDSADSKRLSESEFELTELLQEEKMTGVPLLVFANKQDLVGAL 117 Query: 138 SLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNVHA 181 + L + Q A CSA+ + Sbjct: 118 AADEIASTLDLTSIRDRPWQIQA----------CSAKQGTGLKE 151 >2X77-A nrPDB Length = 189 Score = 59.5 bits (143), Expect = 1e-09, Method: Composition-based stats. Identities = 27/141 (19%), Positives = 53/141 (37%), Gaps = 5/141 (3%) Query: 12 PPGVRSVKVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMVNLQVKGKPVHLHIWD 71 P R ++V+++G GKTS+L G TV + ++ K + +WD Sbjct: 17 LPADRKIRVLMLGLDNAGKTSILYRLHLG----DVVTTVPTVGVNLETLQYKNISFEVWD 72 Query: 72 TAGQDDYDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVNHFC-KKVPIIVVGCK 130 GQ ++ D ++ D T + + Y ++ +K +++ K Sbjct: 73 LGGQTGVRPYWRCYFSDTDAVIYVVDSTDRDRMGVAKHELYALLDEDELRKSLLLIFANK 132 Query: 131 TDLCKDKSLVNKLRRNGLEPV 151 DL S + G+ + Sbjct: 133 QDLPDAASEAEIAEQLGVSSI 153 >4ARZ-A nrPDB Length = 310 Score = 58.0 bits (139), Expect = 3e-09, Method: Composition-based stats. Identities = 31/155 (20%), Positives = 60/155 (38%), Gaps = 24/155 (15%) Query: 19 KVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMVNLQVKGKPVH--------LHIW 70 K++L+G G GK+S+ +Y+ F+ + + + H L++W Sbjct: 8 KLLLMGRSGSGKSSM-----RSIIFSNYSA--FDTRRLGATIDVEHSHLRFLGNMTLNLW 60 Query: 71 DTAGQD-----DYDRLRPLFYPDASVLLLCFDVTSPNSFDN--IFNRWYPEVNHFCKKVP 123 D GQD + + + + VL+ FDV S + IF + ++ + Sbjct: 61 DCGGQDVFMENYFTKQKDHIFQMVQVLIHVFDVESTEVLKDIEIFAKALKQLRKYSPDAK 120 Query: 124 IIVVGCKTDLC--KDKSLVNKLRRNGLEPVTYHRG 156 I V+ K DL + + ++ L + G Sbjct: 121 IFVLLHKMDLVQLDKREELFQIMMKNLSETSSEFG 155 >2GJ9-A nrPDB Length = 172 Score = 58.0 bits (139), Expect = 3e-09, Method: Composition-based stats. Identities = 37/154 (24%), Positives = 61/154 (39%), Gaps = 13/154 (8%) Query: 14 GVRSVKVVLVGDGGCGKTSLLMVFADGA--FPESYTPTVFERYMVNLQVKGKPVHLHIWD 71 G +KVV+ G GK+SLL A T + ++ + G P LHI D Sbjct: 1 GSHGMKVVIAGRPNAGKSSLLNALAGREAAIVTDIAGTTRDVLREHIHIDGMP--LHIID 58 Query: 72 TAGQ-------DDYDRLRP-LFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVNHFCKKVP 123 TAG + R A +L D T+ ++ D W + K+P Sbjct: 59 TAGLREASDEVERIGIERAWQEIEQADRVLFMVDGTTTDAVDPA-EIWPEFIARLPAKLP 117 Query: 124 IIVVGCKTDLCKDKSLVNKLRRNGLEPVTYHRGQ 157 I VV K D+ + ++++ + L ++ G+ Sbjct: 118 ITVVRNKADITGETLGMSEVNGHALIRLSARTGE 151 >6CES-A nrPDB Length = 313 Score = 57.6 bits (138), Expect = 4e-09, Method: Composition-based stats. Identities = 35/151 (23%), Positives = 57/151 (37%), Gaps = 24/151 (15%) Query: 19 KVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMVNLQVKGKPVH------LHIWDT 72 KV+L+G G GKTS+ +Y R + V+ V L++WD Sbjct: 9 KVLLMGKSGSGKTSM-----RSIIFANYIARDTRRLGATIDVEHSHVRFLGNLVLNLWDC 63 Query: 73 AGQDD-----YDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVNHFCKKVP---- 123 GQD + R + + VL+ FDV S + + + + + P Sbjct: 64 GGQDTFMENYFTSQRDNIFRNVEVLIYVFDVESRE-LEKDMHYYQSCLEAILQNSPDAKI 122 Query: 124 IIVVGCKTDL--CKDKSLVNKLRRNGLEPVT 152 +V K DL + L+ K R L ++ Sbjct: 123 FCLV-HKMDLVQEDQRDLIFKEREEDLRRLS 152 >2GAO-A nrPDB Length = 208 Score = 57.2 bits (137), Expect = 4e-09, Method: Composition-based stats. Identities = 33/174 (18%), Positives = 63/174 (36%), Gaps = 9/174 (5%) Query: 15 VRSVKVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMVNLQVKGKPVHLHIWDTAG 74 +S K+V +G GKT+LL + D + + PT+ + + ++ + +D G Sbjct: 33 KKSGKLVFLGLDNAGKTTLLHMLKDDRLGQ-HVPTL---HPTSEELTIAGMTFTTFDLGG 88 Query: 75 QDDYDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRW-YPEVNHFCKKVPIIVVGCKTDL 133 + R+ + P + ++ D + + VPI+++G K D Sbjct: 89 HEQARRVWKNYLPAINGIVFLVDCADHSRLVESKVELNALMTDETISNVPILILGNKIDR 148 Query: 134 CKDKSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLE---CSARLHDNVHAVFQ 184 S GL T +G + + A +E CS F+ Sbjct: 149 TDAISEEKLREIFGLYGQTTGKGNVTLKELNARP-MEVFMCSVLKRQGYGEGFR 201 >2YWH-A nrPDB Length = 600 Score = 56.8 bits (136), Expect = 6e-09, Method: Composition-based stats. Identities = 28/187 (14%), Positives = 48/187 (25%), Gaps = 35/187 (18%) Query: 29 GKTSLLMVFAD-------GAFPESYTPTVFERYMVNLQV------------KGKPVHLHI 69 GK++L + E T+ + V G LH+ Sbjct: 18 GKSTLADRLLEYTGAISEREKREQLLDTLDVERERGITVKMQAVRMFYKAKDGNTYKLHL 77 Query: 70 WDTAGQDDYDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVNHFCKKVPIIVVGC 129 DT G D+ LL D + + N W + + II V Sbjct: 78 IDTPGHVDFSYEVSRALAACEGALLLIDASQGIEAQTVANFW----KAVEQDLVIIPVIN 133 Query: 130 KTDLCKDKSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNVHAVFQEAAEV 189 K DL K + + + + SA+ + + + Sbjct: 134 KIDLPSADVDRVKKQIEEVLGLDPEEA------------ILASAKEGIGIEEILEAIVNR 181 Query: 190 ALSSRGR 196 +G Sbjct: 182 IPPPKGD 188 >3GEH-A nrPDB Length = 462 Score = 56.0 bits (134), Expect = 1e-08, Method: Composition-based stats. Identities = 40/159 (25%), Positives = 63/159 (39%), Gaps = 21/159 (13%) Query: 3 AAQAAGEEAPPGVRSVKVVLVGDGGCGKTSLLMVFA--DGAFPESYTPTVFERYMVNLQV 60 A + GE G +KV +VG GK+SLL ++ D A T + L V Sbjct: 213 ATKDKGELLRTG---LKVAIVGRPNVGKSSLLNAWSQSDRAIVTDLPGTTRDVVESQLVV 269 Query: 61 KGKPVHLHIWDTAG------Q-DDYDRLRPLFYPD-ASVLLLCFDVTSPNSFDNIFNRWY 112 G PV + DTAG Q + R + A ++LL D + + Y Sbjct: 270 GGIPV--QVLDTAGIRETSDQVEKIGVERSRQAANTADLVLLTIDAATGWT--TGDQEIY 325 Query: 113 PEVNHFCKKVPIIVVGCKTDLCKDKSLVNKLRRNGLEPV 151 +V H P+I+V K DL + + + + + + Sbjct: 326 EQVKHR----PLILVMNKIDLVEKQLITSLEYPENITQI 360 >6GNI-B nrPDB Length = 167 Score = 55.3 bits (132), Expect = 2e-08, Method: Composition-based stats. Identities = 30/145 (20%), Positives = 52/145 (35%), Gaps = 19/145 (13%) Query: 19 KVVLVGDGGCGKTSLLMVFADGAFP---ESYTPTVFERYMVNLQVKGKPVHLHIWDTAGQ 75 K++ +G GKT+LL + + ++ PT E + N + +D G Sbjct: 3 KLLFLGLDNAGKTTLLHMLKNDRLATLQPTWHPTSEELAIGN-------IKFTTFDLGGH 55 Query: 76 DDYDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRW-----YPEVNHFCKKVPIIVVGCK 130 RL ++P+ + ++ D P FD E+ VP +++G K Sbjct: 56 IQARRLWKDYFPEVNGIVFLVDAADPERFDEARVELDALFNIAELK----DVPFVILGNK 111 Query: 131 TDLCKDKSLVNKLRRNGLEPVTYHR 155 D S GL T + Sbjct: 112 IDAPNAVSEAELRSALGLLNTTGSQ 136 >1M2O-B nrPDB Length = 190 Score = 55.3 bits (132), Expect = 2e-08, Method: Composition-based stats. Identities = 30/145 (20%), Positives = 52/145 (35%), Gaps = 19/145 (13%) Query: 19 KVVLVGDGGCGKTSLLMVFADGAFP---ESYTPTVFERYMVNLQVKGKPVHLHIWDTAGQ 75 K++ +G GKT+LL + + ++ PT E + N + +D G Sbjct: 25 KLLFLGLDNAGKTTLLHMLKNDRLATLQPTWHPTSEELAIGN-------IKFTTFDLGGH 77 Query: 76 DDYDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRW-----YPEVNHFCKKVPIIVVGCK 130 RL ++P+ + ++ D P FD E+ VP +++G K Sbjct: 78 IQARRLWKDYFPEVNGIVFLVDAADPERFDEARVELDALFNIAELK----DVPFVILGNK 133 Query: 131 TDLCKDKSLVNKLRRNGLEPVTYHR 155 D S GL T + Sbjct: 134 IDAPNAVSEAELRSALGLLNTTGSQ 158 >1XZP-A nrPDB Length = 482 Score = 53.7 bits (128), Expect = 6e-08, Method: Composition-based stats. Identities = 34/218 (15%), Positives = 75/218 (34%), Gaps = 33/218 (15%) Query: 1 MTAAQAAGEEAPPGVRSVKVVLVGDGGCGKTSLLMVFA--DGAFPESYTPTVFERYMVNL 58 +T + R +++V+VG GK++LL D A T + + Sbjct: 227 LTEELKKADAGILLNRGLRMVIVGKPNVGKSTLLNRLLNEDRAIVTDIPGTTRDVISEEI 286 Query: 59 QVKGKPVHLHIWDTAG--------QDDYDRLRPLF-YPDASVLLLCFDVTSPNSFDNIFN 109 ++G + I DTAG + R L A ++L D +SP ++ Sbjct: 287 VIRG--ILFRIVDTAGVRSETNDLVERLGIERTLQEIEKADIVLFVLDASSPLDEED--R 342 Query: 110 RWYPEVNHFCKKVPIIVVGCKTD----LCKDKSLVNKLRRNGLEPVTYHRGQEMARSVGA 165 + + +VV K D + +++ + ++ +G+ + + Sbjct: 343 KILERIK----NKRYLVVINKVDVVEKINEEEIKNKLGTDRHMVKISALKGEGL-EKLEE 397 Query: 166 VAYLECSARLHDNVHAVFQEAAE-VALSSRGRNFWRRI 202 Y E +F+ ++ + + R + + Sbjct: 398 SIYRET--------QEIFERGSDSLITNLRQKQLLENV 427 >1F6B-A nrPDB Length = 198 Score = 53.4 bits (127), Expect = 7e-08, Method: Composition-based stats. Identities = 32/176 (18%), Positives = 62/176 (35%), Gaps = 9/176 (5%) Query: 19 KVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMVNLQVKGKPVHLHIWDTAGQDDY 78 K+V +G GKT+LL + D + + PT+ + + ++ + +D G Sbjct: 27 KLVFLGLDNAGKTTLLHMLKDDRLGQ-HVPTL---HPTSEELTIAGMTFTTFDLGGHIQA 82 Query: 79 DRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRW-YPEVNHFCKKVPIIVVGCKTDLCKDK 137 R+ + P + ++ D + VPI+++G K D + Sbjct: 83 RRVWKNYLPAINGIVFLVDCADHERLLESKEELDSLMTDETIANVPILILGNKIDRPEAI 142 Query: 138 SLVNKLRRNGLEPVTYHRGQEMARSVGAVA---YLECSARLHDNVHAVFQEAAEVA 190 S GL T +G + + A ++ CS F+ A+ Sbjct: 143 SEERLREMFGLYGQTTGKGSVSLKELNARPLEVFM-CSVLKRQGYGEGFRWMAQYI 197 >3J8G-X nrPDB Length = 490 Score = 53.0 bits (126), Expect = 9e-08, Method: Composition-based stats. Identities = 33/193 (17%), Positives = 60/193 (31%), Gaps = 35/193 (18%) Query: 13 PGVRSVKVVLVGDGGCGKTSLLMVFADGAFPESYT--PTVFERYMVNLQVKGKPVHLHIW 70 P +K+ +VG GK++L Y T + + ++ G+ L Sbjct: 198 PQSLPIKLAIVGRPNVGKSTLTNRILGEERVVVYDMPGTTRDSIYIPMERDGREYVLI-- 255 Query: 71 DTAGQDDYDRLRPL-----------FYPDASVLLLCFDVTSPNSFDNIFNRWYPEVNHFC 119 DTAG ++ DA+V++L D S ++ Sbjct: 256 DTAGVRKRGKITDAVEKFSVIKTLQAIEDANVVMLVIDAREGISDQDLS---LLGFILNS 312 Query: 120 KKVPIIVVGCKTDLCKDKSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLE---CSARLH 176 + +IVV K D + V + + +G + + SA Sbjct: 313 GRSLVIVV-NKWD-------------GLSQEVKEQVKETLDFRLGFIDFARVHFISALHG 358 Query: 177 DNVHAVFQEAAEV 189 V +F+ E Sbjct: 359 SGVGNLFESVREA 371 Score = 36.8 bits (84), Expect = 0.006, Method: Composition-based stats. Identities = 27/142 (19%), Positives = 41/142 (28%), Gaps = 16/142 (11%) Query: 20 VVLVGDGGCGKTSLLMVF--ADGAFPESYTPTVFERYMVNLQVKGKPVHLHIWDTAG--- 74 V LVG GK++L A + +R +++G+ DT G Sbjct: 5 VALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGRAEIEGRE--FICIDTGGIDG 62 Query: 75 -----QDDYDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVNHFCKKVPIIVVGC 129 + L +A V+L D + K P +V Sbjct: 63 TEDGVETRMAEQSLLAIEEADVVLFMVDA--RAGLMPADEAIAKHLRSREK--PTFLVAN 118 Query: 130 KTDLCKDKSLVNKLRRNGLEPV 151 KTD V GL + Sbjct: 119 KTDGLDPDQAVVDFYSLGLGEI 140 >5DI3-B nrPDB Length = 263 Score = 52.2 bits (124), Expect = 1e-07, Method: Composition-based stats. Identities = 27/122 (22%), Positives = 45/122 (36%), Gaps = 7/122 (5%) Query: 14 GVRSVKVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMVNLQVKGKPVHLHIWDTA 73 G R + + L+G GKT+LL G TPT + + + ++D Sbjct: 1 GPRKITIALLGLDNAGKTTLLNS-IQGEVDRDTTPTFGFN---STTLNEGKYKIEVFDLG 56 Query: 74 GQDDYDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEV--NHFCKKVPIIVVGCKT 131 G + + + + ++ D P F+ EV N F + PI + K Sbjct: 57 GGKNIRGVWKKYLAEVHAIVYVVDAADPGRFEE-SKMTMAEVLENQFMRDKPICIFANKQ 115 Query: 132 DL 133 DL Sbjct: 116 DL 117 >4M9Q-A nrPDB Length = 227 Score = 52.2 bits (124), Expect = 2e-07, Method: Composition-based stats. Identities = 27/122 (22%), Positives = 45/122 (36%), Gaps = 7/122 (5%) Query: 14 GVRSVKVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMVNLQVKGKPVHLHIWDTA 73 G R + + L+G GKT+LL G TPT + + + ++D Sbjct: 1 GPRKITIALLGLDNAGKTTLLNS-IQGEVDRDTTPTFGFN---STTLNEGKYKIEVFDLG 56 Query: 74 GQDDYDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEV--NHFCKKVPIIVVGCKT 131 G + + + + ++ D P F+ EV N F + PI + K Sbjct: 57 GGKNIRGVWKKYLAEVHAIVYVVDAADPGRFEE-SKMTMAEVLENQFMRDKPICIFANKQ 115 Query: 132 DL 133 DL Sbjct: 116 DL 117 >6G79-A nrPDB Length = 225 Score = 51.8 bits (123), Expect = 2e-07, Method: Composition-based stats. Identities = 40/207 (19%), Positives = 72/207 (34%), Gaps = 27/207 (13%) Query: 9 EEAPPGVRSVKVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMVNLQVKGKPVHLH 68 E+ + VK++L+G GK++++ + +V K +H Sbjct: 22 EDGISAAKDVKLLLLGADNSGKSTIVKQM--KIIHGGSGGSGGTTGIVETHFTFKNLHFR 79 Query: 69 IWDTAGQDDYDRLRPLFYPDASVLLLCFDVTS----PNS---FDNIFNRWYPEVNHFCKK 121 ++D GQ + + D + ++ C D++ S FD+I N N F Sbjct: 80 LFDVGGQRSERKKWIHCFEDVTAIIFCVDLSDYNRMHESLMLFDSICN------NKFFID 133 Query: 122 VPIIVVGCKTDLCKDKSLVNKLR---RNGLEPVTYHRGQEM--------ARSVGAVAYLE 170 II+ K DL +K + L P TY RS Y Sbjct: 134 TSIILFLNKKDLFGEKIKKSPLTICFPEYTGPNTYEDAAAYIQAQFESKNRSPNKEIYCH 193 Query: 171 -CSARLHDNVHAVFQEAAEVALSSRGR 196 A +N +F ++ +++ R Sbjct: 194 MTCATDTNNAQVIFDAVTDIIIANNLR 220 >2LKD-A nrPDB Length = 178 Score = 51.0 bits (121), Expect = 3e-07, Method: Composition-based stats. Identities = 31/174 (17%), Positives = 54/174 (31%), Gaps = 26/174 (14%) Query: 20 VVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMV-NLQVKGKPVHLHIWDTAGQDDY 78 V ++G GKT+LL E + + + V K + DT G + + Sbjct: 11 VTIMGHVDHGKTTLLDAIRHSKVTEQEAGGITQHIGAYQVTVNDKKITF--LDTPGHEAF 68 Query: 79 DRLRPLFYPDASV---LLLCFDVTS---PNSFDNIFNRWYPEVNHFCKKVPIIVVGCKTD 132 +R A V ++L P + + I + VPIIV K D Sbjct: 69 TTMRA---RGAQVTDIVILVVAADDGVMPQTVEAINH-------AKAANVPIIVAINKMD 118 Query: 133 LCKDKSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNVHAVFQEA 186 + V G G + + SA+ + + + + Sbjct: 119 KPEANPDRVMQELMEYNLVPEEWG-------GDTIFCKLSAKTKEGLDHLLEMI 165 >5IMR-C nrPDB Length = 610 Score = 51.0 bits (121), Expect = 3e-07, Method: Composition-based stats. Identities = 25/187 (13%), Positives = 53/187 (28%), Gaps = 35/187 (18%) Query: 29 GKTSLLMVFA-------DGAFPESYTPTVFERYMVNLQV------------KGKPVHLHI 69 GK++L D E + ++ + + G+ H+ Sbjct: 21 GKSTLADRILELTHAVSDREMREQFLDSLELERERGITIKASAVRVTYRAKDGEEYVFHL 80 Query: 70 WDTAGQDDYDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVNHFCKKVPIIVVGC 129 DT G D+ +LL D + + + + + H +P+I Sbjct: 81 IDTPGHVDFTYEVSRALAAVEGVLLVVDASQGVEAETLAKFYMA-LEHGHVIIPVI---N 136 Query: 130 KTDLCKDKSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNVHAVFQEAAEV 189 K DL + L L + + + S + + V + + + Sbjct: 137 KIDLPNARPLEVALEVEEVLGLPADEA------------IFASGKTGEGVEEILEAIVQR 184 Query: 190 ALSSRGR 196 +G Sbjct: 185 IPPPKGD 191 >5J8B-z nrPDB Length = 679 Score = 51.0 bits (121), Expect = 3e-07, Method: Composition-based stats. Identities = 25/187 (13%), Positives = 53/187 (28%), Gaps = 35/187 (18%) Query: 29 GKTSLLMVFA-------DGAFPESYTPTVFERYMVNLQV------------KGKPVHLHI 69 GK++L D E + ++ + + G+ H+ Sbjct: 90 GKSTLADRILELTHAVSDREMREQFLDSLELERERGITIKASAVRVTYRAKDGEEYVFHL 149 Query: 70 WDTAGQDDYDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVNHFCKKVPIIVVGC 129 DT G D+ +LL D + + + + + H +P+I Sbjct: 150 IDTPGHVDFTYEVSRALAAVEGVLLVVDASQGVEAETLAKFYMA-LEHGHVIIPVI---N 205 Query: 130 KTDLCKDKSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNVHAVFQEAAEV 189 K DL + L L + + + S + + V + + + Sbjct: 206 KIDLPNARPLEVALEVEEVLGLPADEA------------IFASGKTGEGVEEILEAIVQR 253 Query: 190 ALSSRGR 196 +G Sbjct: 254 IPPPKGD 260 >4BAS-A nrPDB Length = 199 Score = 50.7 bits (120), Expect = 4e-07, Method: Composition-based stats. Identities = 24/136 (17%), Positives = 45/136 (33%), Gaps = 12/136 (8%) Query: 15 VRSVKVVLVGDGGCGKTSLLMVFADGAFPESYTP-TVFERYMVNLQVKGKPVHLHIWDTA 73 ++VV+ G GKT+++ + TV Y V KG V ++D Sbjct: 15 KTKLQVVMCGLDNSGKTTIINQVKPAQSSSKHITATVG--YNVETFEKG-RVAFTVFDMG 71 Query: 74 GQDDYDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVNHF--------CKKVPII 125 G + L +Y + ++ D + + + + H +VP + Sbjct: 72 GAKKFRGLWETYYDNIDAVIFVVDSSDHLRLCVVKSEIQAMLKHEDIRRELPGGGRVPFL 131 Query: 126 VVGCKTDLCKDKSLVN 141 K D K+ Sbjct: 132 FFANKMDAAGAKTAAE 147 >5KU1-A nrPDB Length = 424 Score = 50.3 bits (119), Expect = 5e-07, Method: Composition-based stats. Identities = 25/139 (17%), Positives = 51/139 (36%), Gaps = 15/139 (10%) Query: 18 VKVVLVGDGGCGKT----SLLMVFA--DGAFPESYTPTVFERYMVNLQVKGKPVHLHIWD 71 + ++G CGK+ +LL E + + V G+ +L + D Sbjct: 243 FRCNVIGVKNCGKSGVLQALLGRNLMRQKKIREDHKSYYAIN---TVYVYGQEKYLLLHD 299 Query: 72 TAGQDDYDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVNHFCKKVPIIVVGCKT 131 + + L V+ L +DV++P SF+ + ++P ++V K+ Sbjct: 300 ISESE---FLTEAEII-CDVVCLVYDVSNPKSFEYCARIFKQHF--MDSRIPCLIVAAKS 353 Query: 132 DLCKDKSLVNKLRRNGLEP 150 DL + K + + Sbjct: 354 DLHEVKQEYSISPTDFCRK 372 >5KSO-A nrPDB Length = 190 Score = 50.3 bits (119), Expect = 5e-07, Method: Composition-based stats. Identities = 25/139 (17%), Positives = 51/139 (36%), Gaps = 15/139 (10%) Query: 18 VKVVLVGDGGCGKT----SLLMVFA--DGAFPESYTPTVFERYMVNLQVKGKPVHLHIWD 71 + ++G CGK+ +LL E + + V G+ +L + D Sbjct: 9 FRCNVIGVKNCGKSGVLQALLGRNLMRQKKIREDHKSYYAIN---TVYVYGQEKYLLLHD 65 Query: 72 TAGQDDYDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVNHFCKKVPIIVVGCKT 131 + + L V+ L +DV++P SF+ + ++P ++V K+ Sbjct: 66 ISESE---FLTEAEII-CDVVCLVYDVSNPKSFEYCARIFKQHF--MDSRIPCLIVAAKS 119 Query: 132 DLCKDKSLVNKLRRNGLEP 150 DL + K + + Sbjct: 120 DLHEVKQEYSISPTDFCRK 138 >3T1O-A nrPDB Length = 198 Score = 50.3 bits (119), Expect = 6e-07, Method: Composition-based stats. Identities = 39/194 (20%), Positives = 64/194 (32%), Gaps = 33/194 (17%) Query: 18 VKVVLVGDGGCGKTS-LLMVFAD------GAFP----ESYTPTVFERYMVNL-QVKGKPV 65 K+V G G GKT+ L +++ G E F+ +++ +VKG Sbjct: 15 FKIVYYGPGLSGKTTNLKWIYSKVPEGRKGEMVSLATEDERTLFFDFLPLDIGEVKGFKT 74 Query: 66 HLHIWDTAGQDDYDRLRPLFYPDASVLLLCFDVT------SPNSFDNIFNRWYPEVNHFC 119 H++ GQ Y+ R L ++ D + S N+ E Sbjct: 75 RFHLYTVPGQVFYNASRKLILRGVDGIVFVADSAPNRLRANAESMRNMREN-LAEYGLTL 133 Query: 120 KKVPIIVVGCKTDLCKDKSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNV 179 VPI++ K DL L + V G+ LE A V Sbjct: 134 DDVPIVIQVNKRDLPDA------LPVEMVRAVVDPEGK--------FPVLEAVATEGKGV 179 Query: 180 HAVFQEAAEVALSS 193 +E + + L+ Sbjct: 180 FETLKEVSRLVLAR 193 >6GDG-D nrPDB Length = 248 Score = 49.9 bits (118), Expect = 8e-07, Method: Composition-based stats. Identities = 27/142 (19%), Positives = 52/142 (36%), Gaps = 17/142 (11%) Query: 17 SVKVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMVNLQVKGKPVHLHIWDTAGQD 76 + +++L+G GK++++ + + QV V+ H++D GQ Sbjct: 35 THRLLLLGADNSGKSTIVKQMRILHGGSGGSGGTSGIFETKFQVD--KVNFHMFDVGGQR 92 Query: 77 DYDRLRPLFYPDASVLLLCFDVTSPNSFDNIF--------NRWYPEVNHFCKKVPIIVVG 128 D R + D + ++ D + N NRW ++ +I+ Sbjct: 93 DERRKWIQCFNDVTAIIFVVDSSDYNRLQEALNLFKSIWNNRWLRTIS-------VILFL 145 Query: 129 CKTDLCKDKSLVNKLRRNGLEP 150 K DL +K L K + P Sbjct: 146 NKQDLLAEKVLAGKSKIEDYFP 167 >1WF3-A nrPDB Length = 301 Score = 49.5 bits (117), Expect = 1e-06, Method: Composition-based stats. Identities = 37/206 (17%), Positives = 65/206 (31%), Gaps = 29/206 (14%) Query: 20 VVLVGDGGCGKTSLLMVFADGAFPE-SYTPTVFERYMVNLQVKGKPVHLHIWDTAGQDD- 77 V +VG GK++LL S P + + + +G+ + DT G Sbjct: 10 VAIVGKPNVGKSTLLNNLLGVKVAPISPRPQTTRKRLRGILTEGRR-QIVFVDTPGLHKP 68 Query: 78 YDRL-----RPLF--YPDASVLLLCFDVTSPNSFDNIFNRWYPEVNHFCKKVPIIVVGCK 130 D L + ++ D + ++ D+ P + ++ + KVPI++VG K Sbjct: 69 MDALGEFMDQEVYEALADVNAVVWVVDLRHPPTPED--ELVARALKPLVGKVPILLVGNK 126 Query: 131 TDLCKDKSLVNKLRRN-------------GLEPVTYHRGQEMA-RSVGAVAYLECSARLH 176 D K K V + +A G Y E A+ Sbjct: 127 LDAAKYPEEAMKAYHELLPEAEPRMLSALDERQVAELKADLLALMPEGPFFYPEDYAKSD 186 Query: 177 DNVHAVFQEAAEVALSSRGRNFWRRI 202 AE+ + W + Sbjct: 187 QTFGE---WVAEILREEAMKRLWHEV 209 >6IAE-A nrPDB Length = 223 Score = 49.1 bits (116), Expect = 1e-06, Method: Composition-based stats. Identities = 33/203 (16%), Positives = 63/203 (31%), Gaps = 38/203 (18%) Query: 18 VKVVLVGDGGCGKTSLLMVF--ADGAFPESYTPT-----------VFERYMVNLQVKG-K 63 VK++++G GK+++ + Y T + + Q G K Sbjct: 10 VKILVLGPSKSGKSTVTNFLAGTRDTPTKEYHETNPLRVLEVEIALDDTRRSGRQAAGLK 69 Query: 64 PVHLHIWDTAGQDDYDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVNHFCKKVP 123 + +WD G + P +A ++ F+ S + WY Sbjct: 70 KAVVQLWDVGGSSKHQAGWPAIASNADGIIYVFNPEVKGSEKELLL-WYKNFAL------ 122 Query: 124 IIVVGCKTDLCKDKSLVNKLRRNGLEPVTYHRGQ-EMA----------RSVGAVAYLECS 172 + +L D + ++ ++H E A + + + LE S Sbjct: 123 -----NQDELDDDNNFKMRVTDGHSLIFSHHSSLPEFAVGDNAIPPMPKQLQGIRALETS 177 Query: 173 ARLH-DNVHAVFQEAAEVALSSR 194 DN F E ++SR Sbjct: 178 LDYQSDNFKEAFDALVEQIIASR 200 >1MKY-A nrPDB Length = 439 Score = 48.0 bits (113), Expect = 3e-06, Method: Composition-based stats. Identities = 31/192 (16%), Positives = 54/192 (28%), Gaps = 28/192 (14%) Query: 9 EEAPPGVRSVKVVLVGDGGCGKTSLLMVFADGA--FPESYTPTVFERYMVNLQVKGKPVH 66 E P ++KV +VG GK++L + T + + + G+ Sbjct: 172 ESKPEITDAIKVAIVGRPNVGKSTLFNAILNKERALVSPIPGTTRDPVDDEVFIDGRKYV 231 Query: 67 LHIWDTAGQDDYDRLRP------LFYP------DASVLLLCFDVTSPNSFDNIFNRWYPE 114 DTAG R+ P Y A V+++ D T + + E Sbjct: 232 F--VDTAGLRRKSRVEPRTVEKYSNYRVVDSIEKADVVVIVLDATQGITRQDQRMAGLME 289 Query: 115 VNHFCKKVPIIVVGCKTDLCKDKSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSAR 174 +VV K DL + + + + SA Sbjct: 290 RRGRAS----VVVFNKWDLVVHREKRYDEFTKLFRE------KLYFIDYSPLIF--TSAD 337 Query: 175 LHDNVHAVFQEA 186 N+ + Sbjct: 338 KGWNIDRMIDAM 349 Score = 38.7 bits (89), Expect = 0.002, Method: Composition-based stats. Identities = 26/187 (13%), Positives = 53/187 (28%), Gaps = 42/187 (22%) Query: 20 VVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMVNLQVKGKPVHLHIWDTAG----- 74 V++VG GK++L R V V+ + DT G Sbjct: 4 VLIVGRPNVGKSTLFNKLVKKKKAIVEDEEGVTRDPVQDTVEWYGKTFKLVDTCGVFDNP 63 Query: 75 ----QDDYDRLRPLFYPDASVLLLCFD----VTSPNSFDNIFNRWYPEVNHFCKKVPIIV 126 + +A ++L D +T + +++ + V I+ Sbjct: 64 QDIISQKMKEVTLNMIREADLVLFVVDGKRGITKED--ESLADFLRK------STVDTIL 115 Query: 127 VGCKTDLCKDKSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLE---CSARLHDNVHAVF 183 V K + R V + ++ + E SA + N+ + Sbjct: 116 VANKA----------ENLREFEREVKPE--------LYSLGFGEPIPVSAEHNINLDTML 157 Query: 184 QEAAEVA 190 + + Sbjct: 158 ETIIKKL 164 >5DN8-A nrPDB Length = 446 Score = 47.6 bits (112), Expect = 4e-06, Method: Composition-based stats. Identities = 28/184 (15%), Positives = 54/184 (29%), Gaps = 33/184 (17%) Query: 18 VKVVLVGDGGCGKTSLLMVFADGAFPESYTP--TVFERYMVNLQVKGKPVHLHIWDTAGQ 75 +K+ ++G GK++L+ Y T + + + L DTAG Sbjct: 179 IKIAMIGRPNVGKSTLINRLLGEERVIVYDQPGTTRDSIYIPFARNDENYTLI--DTAGI 236 Query: 76 DDYDRLRP-----------LFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVNHFCKKVPI 124 +++ A V++ D + ++ R + + I Sbjct: 237 RRRAKIQDYVEKFSMIKSLQAMHAADVVIFLLDARQGVTEQDL--RLLNRIVEAGVSLII 294 Query: 125 IVVGCKTDLC--KDKSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNVHAV 182 V K D +++ V + V AR SA V + Sbjct: 295 AV--NKWDGLNIEERDNVRNAIDRRMPFVD------FARRYF------ISALHGTGVGKL 340 Query: 183 FQEA 186 F+ Sbjct: 341 FRAI 344 >5YMX-A nrPDB Length = 203 Score = 47.2 bits (111), Expect = 5e-06, Method: Composition-based stats. Identities = 35/198 (17%), Positives = 65/198 (32%), Gaps = 36/198 (18%) Query: 18 VKVVLVGDGGCGKTSLLMVFADGA-----------FPESYTPTVFERYM--VNLQVKGKP 64 K+V G G CGKT+ L + T+F ++ +++G Sbjct: 13 CKIVYYGPGLCGKTTNL-QYIYNKTAAETKGKLISLSTETDRTLFFDFLPLSLGEIRGFK 71 Query: 65 VHLHIWDTAGQDDYDRLRPLFYPDASVLLLCFDV------TSPNSFDNIFNRWYPEVNHF 118 H++ GQ YD R L ++ D + S +N+ E + Sbjct: 72 TRFHLYTVPGQVFYDASRKLILKGVDGVVFVADSQIERMEANMESLENLRIN-LAEQGYD 130 Query: 119 CKKVPIIVVGCKTDLCKDKSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDN 178 K+P ++ K DL VT ++ A + + + A Sbjct: 131 LNKIPYVIQYNKRDLPN--------------AVTVEEMRK-ALNHRNIPEYQAVAPTGVG 175 Query: 179 VHAVFQEAAEVALSSRGR 196 V + A++ L+ + Sbjct: 176 VFDTLKAVAKLVLTELKK 193 >3CB4-D nrPDB Length = 599 Score = 46.8 bits (110), Expect = 7e-06, Method: Composition-based stats. Identities = 24/184 (13%), Positives = 44/184 (23%), Gaps = 41/184 (22%) Query: 29 GKTSL---LMVFADGAFPESYTPTVFER----YMVNLQV------------KGKPVHLHI 69 GK++L ++ G V + + + G+ L+ Sbjct: 16 GKSTLSDRIIQICGGLSDREMEAQVLDSMDLERERGITIKAQSVTLDYKASDGETYQLNF 75 Query: 70 WDTAGQDDYDRLRPLFYPDASVLLLCFDV---TSPNSFDNIFNRWYPEVNHFCKKVPIIV 126 DT G D+ LL D + N + ++ ++ Sbjct: 76 IDTPGHVDFSYEVSRSLAACEGALLVVDAGQGVEAQTLANCYTAMEMDLE-------VVP 128 Query: 127 VGCKTDLCKDKSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNVHAVFQEA 186 V K DL + + CSA+ V V + Sbjct: 129 VLNKIDLPAADPERVAEEIEDIVGIDATDAVR------------CSAKTGVGVQDVLERL 176 Query: 187 AEVA 190 Sbjct: 177 VRDI 180 >6D4G-A nrPDB Length = 271 Score = 46.4 bits (109), Expect = 8e-06, Method: Composition-based stats. Identities = 25/114 (21%), Positives = 41/114 (35%), Gaps = 21/114 (18%) Query: 90 SVLLLCFDVTSP--NSFDNIFN---RWYPEVNHFCKKVPIIVVGCKTDLCKDKSLVNKLR 144 LL DV+ +FD+ Y ++ K PI++V K D ++ + Sbjct: 163 DGFLLGIDVSRGMNRNFDDQLKFVSNLYNQLAKTKK--PIVIVLTKCDEGVERYI----- 215 Query: 145 RNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNVHAVFQEAAEVALSSRGRNF 198 A S + +E SAR + NV F ++ SRG+ Sbjct: 216 ---------RDAHTFALSKKNLQVVETSARSNVNVDLAFSTLVQLIDKSRGKTK 260 >2DYK-A nrPDB Length = 161 Score = 45.3 bits (106), Expect = 2e-05, Method: Composition-based stats. Identities = 25/125 (20%), Positives = 36/125 (28%), Gaps = 19/125 (15%) Query: 19 KVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMVNLQVKGKPVHLHIWDTAG---- 74 KVV+VG GK+SL R + V+ + DT G Sbjct: 3 KVVIVGRPNVGKSSLFNRLLKKRSAVVADVPGVTRDLKEGVVETDRGRFLLVDTGGLWSG 62 Query: 75 -------QDDYDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVNHFCKKVPIIVV 127 Q+ DR ++ F V + K P+I+V Sbjct: 63 DKWEKKIQEKVDRALE------DAEVVLFAVDGRAELTQADYEVAEYLRRKGK--PVILV 114 Query: 128 GCKTD 132 K D Sbjct: 115 ATKVD 119 >2E87-A nrPDB Length = 357 Score = 44.9 bits (105), Expect = 3e-05, Method: Composition-based stats. Identities = 32/200 (16%), Positives = 65/200 (32%), Gaps = 32/200 (16%) Query: 20 VVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMVNL-QVKGKPVHLHIWDTAGQ--- 75 VV+ G GK++LL F +N+ Q + I DT G Sbjct: 170 VVIAGHPNVGKSTLLKALTTAK--PEIASYPFTTRGINVGQFEDGYFRYQIIDTPGLLDR 227 Query: 76 --------DDYDRLRPLFYPDASVLLLCFDVTSPNSF-DNIFNRWYPEVNHFCKKVPIIV 126 + L + ++++ FD + F + EV+ K +P +V Sbjct: 228 PISERNEIEKQAILALRYL--GNLIIYIFDPSEHCGFPLEEQIHLFEEVHGEFKDLPFLV 285 Query: 127 VGCKTDLCKDKSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNVHAVFQEA 186 V K D+ ++++ ++ + G ++ SA + V +E Sbjct: 286 VINKIDVADEENIKRL--------------EKFVKEKGLNP-IKISALKGTGIDLVKEEI 330 Query: 187 AEVALSSRGRNFWRRITQGF 206 + + +I + Sbjct: 331 IKTLRPLAEKVAREKIEREL 350 >5LAD-A nrPDB Length = 404 Score = 44.5 bits (104), Expect = 3e-05, Method: Composition-based stats. Identities = 31/134 (23%), Positives = 55/134 (41%), Gaps = 20/134 (14%) Query: 20 VVLVGDGGCGKTSLLMVFADG--AFPESYTPTVFERYMVNLQVKG-KPVHLHIWDTAGQD 76 +V+ G GK+S + + Y T + ++++ PV L DT G D Sbjct: 12 IVVAGRRNVGKSSFMNALVGQNVSIVSEYAGTTTDPVYKSMELYPVGPVTL--VDTPGLD 69 Query: 77 DYDRL--------RPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVNHFCKKVPIIVVG 128 D L R +FY A +L D + P +++ + E+ ++P +VV Sbjct: 70 DVGELGRLRVEKARRVFYR-ADCGILVTD-SEPTPYEDDVVNLFKEM-----EIPFVVVV 122 Query: 129 CKTDLCKDKSLVNK 142 K D+ +K+ K Sbjct: 123 NKIDVLGEKAEELK 136 >5ZZM-A nrPDB Length = 426 Score = 44.5 bits (104), Expect = 4e-05, Method: Composition-based stats. Identities = 35/187 (18%), Positives = 63/187 (33%), Gaps = 45/187 (24%) Query: 20 VVLVGDGGCGKTSLLMV------FADGAFPESYTPTVFERYMVNLQVKGKPVHLHIWDTA 73 V LVG GK++L +A + PT+ +++ G+ V DT Sbjct: 200 VSLVGYTNAGKSTLFNRITEARVYAADQLFATLDPTL---RRIDVADVGETVLA---DTV 253 Query: 74 GQDD---------YDRLRPLFYPDASVLLLCFDVTSPNSFDNI--FNRWYPEVNHFCKKV 122 G + A++LL D +NI N E++ ++ Sbjct: 254 GFIRHLPHDLVAAFKA-TLQETRQATLLLHVIDAADVRVQENIEAVNTVLEEID--AHEI 310 Query: 123 PIIVVGCKTDLCKD-KSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNVHA 181 P ++V K D+ +D + +++ N V SA+ + Sbjct: 311 PTLLVMNKIDMLEDFEPRIDRDEENKPNRVWL------------------SAQTGAGIPQ 352 Query: 182 VFQEAAE 188 +FQ E Sbjct: 353 LFQALTE 359 >4V7F-o nrPDB Length = 647 Score = 44.1 bits (103), Expect = 4e-05, Method: Composition-based stats. Identities = 41/212 (19%), Positives = 76/212 (35%), Gaps = 23/212 (10%) Query: 4 AQAAGEEAPPGVRSVKVVLVGDGGCGKTSLLMVFAD-GAFPESYTPTVFERYMVNLQVKG 62 Q G + +++ G GK+S L + Y T Y+ + Sbjct: 154 RQHIGRLPSIDPNTRTLLICGYPNVGKSSFLRCITKSDVDVQPYAFTTKSLYVGHF--DY 211 Query: 63 KPVHLHIWDTAG-----QDDYDRLRPLF-YPDAS---VLLLCFDVTSPNSFD-NIFNRWY 112 K + DT G ++ + + Y A +L D++ F + + Sbjct: 212 KYLRFQAIDTPGILDRPTEEMNNIEMQSIYAIAHLRSCVLYFMDLSEQCGFTIEAQVKLF 271 Query: 113 PEVNHFCKKVPIIVVGCKTDLCKDKSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECS 172 + ++VV KTD+ + +++ R LE V + V V + S Sbjct: 272 HSIKPLFANKSVMVVINKTDIIR-PEDLDEERAQLLESV---------KEVPGVEIMTSS 321 Query: 173 ARLHDNVHAVFQEAAEVALSSRGRNFWRRITQ 204 +L +NV V +A E L+SR N + ++ Sbjct: 322 CQLEENVMEVRNKACEKLLASRIENKLKSQSR 353 >3PR1-A nrPDB Length = 195 Score = 43.7 bits (102), Expect = 5e-05, Method: Composition-based stats. Identities = 31/200 (15%), Positives = 59/200 (29%), Gaps = 38/200 (19%) Query: 1 MTAAQAAGEEAPPGVRSVKVVLVGDGGCGKTSLLMVFADGA--FPESYTPTVFERYMVNL 58 + A+ G+ PP V VG GK+SLL + F T + +N Sbjct: 9 VKVARTPGDYPPPLKGE--VAFVGRSNVGKSSLLNALFNRKIAFVSK---TPGKTRSINF 63 Query: 59 QVKGKPVHLHIWDTAG--------QDD--YDRLRPLFYPDA----SVLLLCFDVTSPNSF 104 + + D G ++ + RL ++ + V LL P Sbjct: 64 YLVNSKYYF--VDLPGYGYAKVSKKERMLWKRLVEDYFKNRWSLQMVFLLVDGRIPPQDS 121 Query: 105 DNIFNRWYPEVNHFCKKVPIIVVGCKTDLCKDKSLVNKLRRNGLEPVTYHRGQEMARSVG 164 D + W + +P +V K D + +++ G Sbjct: 122 DLMMVEWMKSL-----NIPFTIVLTKMD----------KVKMSERAKKLEEHRKVFSKYG 166 Query: 165 AVAYLECSARLHDNVHAVFQ 184 + S+ + + + Sbjct: 167 EYTIIPTSSVTGEGISELLD 186 >3R9W-A nrPDB Length = 307 Score = 43.7 bits (102), Expect = 5e-05, Method: Composition-based stats. Identities = 31/131 (23%), Positives = 40/131 (30%), Gaps = 28/131 (21%) Query: 20 VVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMVNLQVKGKPVHLHI--WDTAGQ-- 75 V +VG GK++LL G +P M L VK P I DT G Sbjct: 12 VAIVGKPNVGKSTLLNNLL-GTKVSIISPKAGTTRMRVLGVKNIPNEAQIIFLDTPGIYE 70 Query: 76 --------DDYDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVNHFCKKV----- 122 + +A V+L D T W P + Sbjct: 71 PKKSDVLGHSMVEIAKQSLEEADVILFMIDAT---------EGWRPRDEEIYQNFIKPLN 121 Query: 123 -PIIVVGCKTD 132 P+IVV K D Sbjct: 122 KPVIVVINKID 132 >6GB2-BC nrPDB Length = 657 Score = 43.7 bits (102), Expect = 6e-05, Method: Composition-based stats. Identities = 37/189 (19%), Positives = 64/189 (33%), Gaps = 35/189 (18%) Query: 20 VVLVGDGGCGKTSLLMVFADGAFPESYTPTVF--------ERYMVNLQVKGKPVHLHIWD 71 V ++G GKT+LL F ++ V ++V+L G+ + D Sbjct: 113 VTIMGHVDHGKTTLL-----DKFRKTQVAAVETGGITQHIGAFLVSLP-SGEKITF--LD 164 Query: 72 TAGQDDYDRLRPLFYPDASV---LLLCFDVTSPNSFDNIFNRWYPEVNHFCK-KVPIIVV 127 T G + +R A V ++L + + + H +VPII+ Sbjct: 165 TPGHAAFSAMRA---RGAQVTDIVVLVVAADDG-----VMKQTVESIQHAKDAQVPIILA 216 Query: 128 GCKTDLCKDKSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNVHAVFQEAA 187 K D + K + V G G V + SA DN+ A+ + Sbjct: 217 VNKCDKAEADPEKVKKELLAYDVVCEDYG-------GDVQAVPVSALTGDNLMALAEATV 269 Query: 188 EVALSSRGR 196 +A + Sbjct: 270 ALAEMLELK 278 >4KJZ-A nrPDB Length = 473 Score = 43.0 bits (100), Expect = 9e-05, Method: Composition-based stats. Identities = 28/170 (16%), Positives = 54/170 (31%), Gaps = 18/170 (10%) Query: 20 VVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMVNLQVKGKPVHLHIWDTAGQDDYD 79 VV++G GKT+LL + + +++ +VK + DT G + + Sbjct: 75 VVIMGHVDHGKTTLLD-YLRKSRIAEKEAGGITQHVGAFEVKTPQGTVVFIDTPGHEAFT 133 Query: 80 RLRPLFYPDASVLLLCFDVTS---PNSFDNIFNRWYPEVNHFCKKVPIIVVGCKTDLCKD 136 +R A + ++ P + + I + +I K DL + Sbjct: 134 TIRQRGAKVADIAVIVIAADDGIMPQTEEAIAHAKAAGAK-------LIFAINKIDLPQA 186 Query: 137 KSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNVHAVFQEA 186 K + V G G + SA+ V + + Sbjct: 187 DPEKVKRQLMERGFVPEEYG-------GDAIVIPISAKTGQGVQDLLEMI 229 >4B44-A nrPDB Length = 363 Score = 43.0 bits (100), Expect = 9e-05, Method: Composition-based stats. Identities = 28/170 (16%), Positives = 54/170 (31%), Gaps = 18/170 (10%) Query: 20 VVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMVNLQVKGKPVHLHIWDTAGQDDYD 79 VV++G GKT+LL + + +++ +VK + DT G + + Sbjct: 76 VVIMGHVDHGKTTLLD-YLRKSRIAEKEAGGITQHVGAFEVKTPQGTVVFIDTPGHEAFT 134 Query: 80 RLRPLFYPDASVLLLCFDVTS---PNSFDNIFNRWYPEVNHFCKKVPIIVVGCKTDLCKD 136 +R A + ++ P + + I + +I K DL + Sbjct: 135 TIRQRGAKVADIAVIVIAADDGIMPQTEEAIAHAKAAGAK-------LIFAINKIDLPQA 187 Query: 137 KSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNVHAVFQEA 186 K + V G G + SA+ V + + Sbjct: 188 DPEKVKRQLMERGFVPEEYG-------GDAIVIPISAKTGQGVQDLLEMI 230 >3V00-C nrPDB Length = 356 Score = 42.6 bits (99), Expect = 1e-04, Method: Composition-based stats. Identities = 33/195 (16%), Positives = 62/195 (31%), Gaps = 54/195 (27%) Query: 46 YTPTVFERYMVNLQVKG--------KPVHLHIWDTAGQDDYDRLRPLFYPDASVLLLCFD 97 Y PT + ++ G K ++ ++D GQ + + + ++ C Sbjct: 169 YVPTEQDVLRSRVKTTGIIETQFSFKDLNFRMFDVGGQRSERKKWIHCFEGVTAIIFCVA 228 Query: 98 VTS--------------PNS---FDNI-FNRWYPEVNHFCKKVPIIVVGCKTDLCKDKSL 139 ++ S F++I N+W+ II+ K DL ++K Sbjct: 229 LSDYDLVLAEDEEMNRMHESMHLFNSICNNKWFT-------DTSIILFLNKKDLFEEKIK 281 Query: 140 VNKLRRNGLEPV---TYHRGQEMARSVGAVAYLE--------------CSARLHDNVHAV 182 + L E TY A + V +LE A NV V Sbjct: 282 KSPLTICYPEYAGSNTYEE----AGNYIKVQFLELNMRRDVKEIYSHMTCATDTQNVKFV 337 Query: 183 FQEAAEVALSSRGRN 197 F ++ + ++ Sbjct: 338 FDAVTDIIIKENLKD 352 Score = 31.8 bits (71), Expect = 0.25, Method: Composition-based stats. Identities = 10/28 (35%), Positives = 19/28 (67%) Query: 9 EEAPPGVRSVKVVLVGDGGCGKTSLLMV 36 E+A R+VK++L+G G GK++++ Sbjct: 27 EDAEKDARTVKLLLLGAGESGKSTIVKQ 54 >5KUT-A nrPDB Length = 189 Score = 42.6 bits (99), Expect = 1e-04, Method: Composition-based stats. Identities = 28/136 (20%), Positives = 48/136 (35%), Gaps = 14/136 (10%) Query: 20 VVLVGDGGCGKTSLLMVFAD---GAFPESYTPTVFERYMVNLQVKGKPVHLHIWD--TAG 74 +VG G GK++ L F G P + + +QV G+ +L + + T G Sbjct: 12 CKVVGACGVGKSAFLQAFLGRGLGHQDTREQPPGYA--IDTVQVNGQEKYLILCEVGTDG 69 Query: 75 QDDYDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVNHFCKKVPIIVVGCKTDLC 134 L V L FD + P SF + + + + + P + V K DL Sbjct: 70 L-----LATSLDATCDVACLMFDGSDPKSFAHCASVYKHH--YMDGQTPCLFVSSKADLP 122 Query: 135 KDKSLVNKLRRNGLEP 150 + ++ Sbjct: 123 EGVAVSGPSPAEFCRK 138 >3C5H-A nrPDB Length = 255 Score = 42.6 bits (99), Expect = 1e-04, Method: Composition-based stats. Identities = 23/106 (21%), Positives = 37/106 (34%), Gaps = 21/106 (19%) Query: 90 SVLLLCFDVTSP--NSFDNIFN---RWYPEVNHFCKKVPIIVVGCKTDLCKDKSLVNKLR 144 LL DV+ +FD+ Y ++ K PI+VV K D ++ + Sbjct: 164 DGFLLGIDVSRGMNRNFDDQLKFVSNLYNQLAKTKK--PIVVVLTKCDEGVERYI----- 216 Query: 145 RNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNVHAVFQEAAEVA 190 A S + +E SAR + NV F ++ Sbjct: 217 ---------RDAHTFALSKKNLQVVETSARSNVNVDLAFSTLVQLI 253 >3EC1-A nrPDB Length = 369 Score = 42.6 bits (99), Expect = 1e-04, Method: Composition-based stats. Identities = 22/97 (22%), Positives = 32/97 (32%), Gaps = 14/97 (14%) Query: 94 LCFDVTSPNSFDNIFNRWYPEVNHFCKKVPIIVVGCKTDLCKDKSLVNKLRRNGLEPVTY 153 L ++ F+ F P + F PI++VG K DL KL R Sbjct: 74 LVVNIVDIFDFNGSF---IPGLPRFAADNPILLVGNKADLLPRSVKYPKLLRW------- 123 Query: 154 HRGQEMARSVGAVAYLEC--SARLHDNVHAVFQEAAE 188 + MA +G C SA + V + Sbjct: 124 --MRRMAEELGLCPVDVCLVSAAKGIGMAKVMEAINR 158 >3J4J-A nrPDB Length = 569 Score = 42.6 bits (99), Expect = 1e-04, Method: Composition-based stats. Identities = 28/170 (16%), Positives = 54/170 (31%), Gaps = 18/170 (10%) Query: 20 VVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMVNLQVKGKPVHLHIWDTAGQDDYD 79 VV++G GKT+LL + + +++ +VK + DT G + + Sbjct: 76 VVIMGHVDHGKTTLLD-YLRKSRIAEKEAGGITQHVGAFEVKTPQGTVVFIDTPGHEAFT 134 Query: 80 RLRPLFYPDASVLLLCFDVTS---PNSFDNIFNRWYPEVNHFCKKVPIIVVGCKTDLCKD 136 +R A + ++ P + + I + +I K DL + Sbjct: 135 TIRQRGAKVADIAVIVIAADDGIMPQTEEAIAHAKAAGAK-------LIFAINKIDLPQA 187 Query: 137 KSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNVHAVFQEA 186 K + V G G + SA+ V + + Sbjct: 188 DPEKVKRQLMERGFVPEEYG-------GDAIVIPISAKTGQGVQDLLEMI 230 >2GTP-A nrPDB Length = 323 Score = 42.2 bits (98), Expect = 2e-04, Method: Composition-based stats. Identities = 31/193 (16%), Positives = 59/193 (30%), Gaps = 46/193 (23%) Query: 44 ESYTPTVFERYMVNLQVKG--------KPVHLHIWDTAGQDDYDRLRPLFYPDASVLLLC 95 +Y PT + ++ G K +H ++D GQ + + + ++ C Sbjct: 134 PNYIPTQQDVLRTRVKTTGIVETHFTFKDLHFKMFDVGGQRSERKKWIHCFEGVTAIIFC 193 Query: 96 FDVTS--------------PNS---FDNI-FNRWYPEVNHFCKKVPIIVVGCKTDLCKDK 137 ++ S FD+I N+W+ II+ K DL ++K Sbjct: 194 VALSDYDLVLAEDEEMNRMHESMKLFDSICNNKWFT-------DTSIILFLNKKDLFEEK 246 Query: 138 SLVNKLR---RNGLEPVTYHRGQEM----------ARSVGAVAYLECSARLHDNVHAVFQ 184 + L TY + + A NV VF Sbjct: 247 IKKSPLTICYPEYAGSNTYEEAAAYIQCQFEDLNKRKDTKEIYTHFTCATDTKNVQFVFD 306 Query: 185 EAAEVALSSRGRN 197 +V + + ++ Sbjct: 307 AVTDVIIKNNLKD 319 Score = 31.8 bits (71), Expect = 0.24, Method: Composition-based stats. Identities = 8/21 (38%), Positives = 15/21 (71%) Query: 16 RSVKVVLVGDGGCGKTSLLMV 36 R VK++L+G G GK++++ Sbjct: 1 REVKLLLLGAGESGKSTIVKQ 21 >2CXX-A nrPDB Length = 190 Score = 41.8 bits (97), Expect = 2e-04, Method: Composition-based stats. Identities = 34/204 (16%), Positives = 60/204 (29%), Gaps = 42/204 (20%) Query: 20 VVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMVNLQVKGKPVHLHIWDTAG----- 74 ++ G GK++L+ P R ++ ++ K + D G Sbjct: 4 IIFAGRSNVGKSTLIYRLTGKKVRRGKRP-GVTRKIIEIEWKNHKII----DMPGFGFMM 58 Query: 75 ------QDDYDRLRPLFY----PDASVLLLCFDVTSPNSFDNIFNRWYP--EVNHFCK-- 120 Q+ F + V +L D + I RW E+ + Sbjct: 59 GLPKEVQERIKDEIVHFIEDNAKNIDVAVLVVD---GKAAPEIIKRWEKRGEIPIDVEFY 115 Query: 121 ------KVPIIVVGCKTDLCKDKSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSAR 174 +P IV K D K+ V V ++ ++ SA+ Sbjct: 116 QFLRELDIPTIVAVNKLDKIKNVQEVINFLAEKF-EVPLSEIDKV--------FIPISAK 166 Query: 175 LHDNVHAVFQEAAEVALSSRGRNF 198 DN+ + EV +GR Sbjct: 167 FGDNIERLKNRIFEVIRERQGRRV 190 >2QAG-A nrPDB Length = 361 Score = 41.0 bits (95), Expect = 4e-04, Method: Composition-based stats. Identities = 24/115 (20%), Positives = 42/115 (36%), Gaps = 29/115 (25%) Query: 17 SVKVVLVGDGGCGKTSLLMV-FADGAFPESYTP--------TV-FERYMVNLQVKGKPVH 66 +++VG+ G GK++L+ F +PE P TV E V ++ +G + Sbjct: 37 EFTLMVVGESGLGKSTLINSLFLTDLYPERVIPGAAEKIERTVQIEASTVEIEERGVKLR 96 Query: 67 LHIWDTAGQDDYDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVNHFCKK 121 L + DT G Y DA + + F I + + + Sbjct: 97 LTVVDTPG-----------YGDA--------INCRDCFKTIISYIDEQFERYLHD 132 >3FTQ-A nrPDB Length = 274 Score = 41.0 bits (95), Expect = 4e-04, Method: Composition-based stats. Identities = 24/115 (20%), Positives = 42/115 (36%), Gaps = 29/115 (25%) Query: 17 SVKVVLVGDGGCGKTSLLMV-FADGAFPESYTP--------TV-FERYMVNLQVKGKPVH 66 +++VG+ G GK++L+ F +PE P TV E V ++ +G + Sbjct: 5 EFTLMVVGESGLGKSTLINSLFLTDLYPERIIPGAAEKIERTVQIEASTVEIEERGVKLR 64 Query: 67 LHIWDTAGQDDYDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVNHFCKK 121 L + DT G Y DA + + F I + + + Sbjct: 65 LTVVDTPG-----------YGDA--------INCRDCFKTIISYIDEQFERYLHD 100 >3IZY-P nrPDB Length = 537 Score = 40.6 bits (94), Expect = 4e-04, Method: Composition-based stats. Identities = 29/163 (17%), Positives = 51/163 (31%), Gaps = 19/163 (11%) Query: 20 VVLVGDGGCGKTSLLMVFADGA---FPESYTPTVFERYMVNLQVKGKPVHLHIWDTAGQD 76 V ++G GKT+LL ++V+L G+ + DT G Sbjct: 7 VTIMGHVDHGKTTLLDKLRKTQVAAMEAGGITQHIGAFLVSLP-SGEKITF--LDTPGHA 63 Query: 77 DYDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVNHFCK-KVPIIVVGCKTDLCK 135 + +R +++L + + + H VPI++ K D + Sbjct: 64 AFSAMRARGTQVTDIVILVVAADDG-----VMKQTVESIQHAKDAHVPIVLAINKCDKAE 118 Query: 136 DKSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDN 178 K + V G G V + SA +N Sbjct: 119 ADPEKVKKELLAYDVVCEDYG-------GDVQAVHVSALTGEN 154 >1SHZ-A nrPDB Length = 340 Score = 40.6 bits (94), Expect = 5e-04, Method: Composition-based stats. Identities = 18/70 (25%), Positives = 30/70 (42%), Gaps = 10/70 (14%) Query: 9 EEAPPGVRSVKVVLVGDGGCGKTSLLMVF-------ADGAFPESYTPTVFER--YMVNLQ 59 E+ R VK++L+G G GK++ L D E + PT++ + + Sbjct: 4 EDGEKAAREVKLLLLGAGESGKSTFLKQMRIIHGQDFDQRAREEFRPTIYSNVIKGMRVL 63 Query: 60 VKGKPVHLHI 69 V + LHI Sbjct: 64 VDARE-KLHI 72 Score = 38.7 bits (89), Expect = 0.002, Method: Composition-based stats. Identities = 28/166 (16%), Positives = 53/166 (31%), Gaps = 38/166 (22%) Query: 63 KPVHLHIWDTAGQDDYDRLRPLFYPDASVLLLC-----FD---VTSPNS---------FD 105 K +H ++D GQ + + + ++ C +D + + FD Sbjct: 178 KDLHFKMFDVGGQRSERKKWFECFEGVTAIIFCVALSDYDQVLMEDRQTNRMHESMKLFD 237 Query: 106 NI-FNRWYPEVNHFCKKVPIIVVGCKTDLCKDKSLVNKLRRNGLEPV---TYHRGQEM-- 159 +I N+W+ II+ K DL ++K + L E TY Sbjct: 238 SICNNKWFT-------DTSIILFLNKKDLFEEKIKKSPLTICYPEYAGSNTYEEAAAYIQ 290 Query: 160 --------ARSVGAVAYLECSARLHDNVHAVFQEAAEVALSSRGRN 197 + + A NV VF +V + + ++ Sbjct: 291 CQFEDLNKRKDTKEIYTHFTCATDTKNVQFVFDAVTDVIIKNNLKD 336 >3JB9-B nrPDB Length = 984 Score = 40.3 bits (93), Expect = 6e-04, Method: Composition-based stats. Identities = 29/163 (17%), Positives = 54/163 (33%), Gaps = 28/163 (17%) Query: 29 GKTSLLMVFADGAFPES---------YTPTVFERYMVNLQVKGKPVHLHIWD-------- 71 GK++LL + P++ YT T + + +K P+ L + D Sbjct: 153 GKSALLDLLVYYTHPDTKPPKRRSLRYTDTHYLERERVMSIKSTPLTLAVSDMKGKTFAF 212 Query: 72 ----TAGQDDYDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVNHFC-KKVPIIV 126 T G D+ + ++L DV + + + H +PI++ Sbjct: 213 QCIDTPGHVDFVDEVAAPMAISDGVVLVVDVI-----EGVMINTTRIIKHAILHDMPIVL 267 Query: 127 VGCKTD-LCKDKSLVNKLRRNGLEPVTYHRGQEMARSVGAVAY 168 V K D L + L + L V + + + Y Sbjct: 268 VLNKVDRLILELRLPPNDAYHKLRHVIDEVNDNICQISKDLKY 310 >3IEU-A nrPDB Length = 301 Score = 40.3 bits (93), Expect = 7e-04, Method: Composition-based stats. Identities = 30/178 (16%), Positives = 56/178 (31%), Gaps = 38/178 (21%) Query: 20 VVLVGDGGCGKTSLLMVFADGAFP-ESYTPTVFERYMVNLQVKGKPVHLHIWDTAGQ--D 76 + +VG GK++LL S +V + +G DT G + Sbjct: 11 IAIVGRPNVGKSTLLNKLLGQKISITSRKAQTTRHRIVGIHTEGA-YQAIYVDTPGLHME 69 Query: 77 DYDRLRPL-------FYPDASVLLLCFDVTSPNSFDNIFNRWYPEVNHFCK-----KVPI 124 + + L D +++ + T RW P+ K P+ Sbjct: 70 EKRAINRLMNKAASSSIGDVELVIFVVEGT----------RWTPDDEMVLNKLREGKAPV 119 Query: 125 IVVGCKTDLCKDKSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNVHAV 182 I+ K D ++K+ + Q +A + + + SA NV + Sbjct: 120 ILAVNKVDNVQEKADLLPHL------------QFLASQMNFLDIVPISAETGLNVDTI 165 >2ODE-A nrPDB Length = 350 Score = 39.5 bits (91), Expect = 0.001, Method: Composition-based stats. Identities = 31/193 (16%), Positives = 60/193 (31%), Gaps = 46/193 (23%) Query: 44 ESYTPTVFERYMVNLQVKG--------KPVHLHIWDTAGQDDYDRLRPLFYPDASVLLLC 95 +Y PT + ++ G K ++ ++D GQ + + + ++ C Sbjct: 164 SNYIPTQQDVLRTRVKTTGIVETHFTFKDLYFKMFDVGGQRSERKKWIHCFEGVTAIIFC 223 Query: 96 -----FDVT------------SPNSFDNI-FNRWYPEVNHFCKKVPIIVVGCKTDLCKD- 136 +D+ S FD+I N+W+ E II+ K DL ++ Sbjct: 224 VALSDYDLVLAEDEEMNRMHESMKLFDSICNNKWFTE-------TSIILFLNKKDLFEEK 276 Query: 137 --KSLVNKLRRNGLEPVTYHRGQEM----------ARSVGAVAYLECSARLHDNVHAVFQ 184 +S + TY + + A NV VF Sbjct: 277 IKRSPLTICYPEYTGSNTYEEAAAYIQCQFEDLNRRKDTKEIYTHFTCATDTKNVQFVFD 336 Query: 185 EAAEVALSSRGRN 197 +V + + + Sbjct: 337 AVTDVIIKNNLKE 349 Score = 32.9 bits (74), Expect = 0.10, Method: Composition-based stats. Identities = 8/28 (28%), Positives = 17/28 (60%) Query: 9 EEAPPGVRSVKVVLVGDGGCGKTSLLMV 36 E+ + VK++L+G G GK++++ Sbjct: 24 EDGEKAAKEVKLLLLGAGESGKSTIVKQ 51 >3T5D-A nrPDB Length = 274 Score = 39.1 bits (90), Expect = 0.001, Method: Composition-based stats. Identities = 20/74 (27%), Positives = 32/74 (43%), Gaps = 10/74 (13%) Query: 11 APPGV-RSVKVVLVGDGGCGKTSLLMV-FADGAFPESY-------TPTV-FERYMVNLQV 60 P G +++VG+ G GK++L+ F + Y TV E+ V ++ Sbjct: 1 GPLGSGFEFTLMVVGESGLGKSTLINSLFLTDLYSPEYPGPSHRIKKTVQVEQSKVLIKE 60 Query: 61 KGKPVHLHIWDTAG 74 G + L I DT G Sbjct: 61 GGVQLLLTIVDTPG 74 >1LNZ-A nrPDB Length = 342 Score = 39.1 bits (90), Expect = 0.001, Method: Composition-based stats. Identities = 33/207 (15%), Positives = 64/207 (30%), Gaps = 35/207 (16%) Query: 15 VRSVKVV----LVGDGGCGKTSLLMVF--ADGAFPESYTPTVFERYMVNLQVKGKPVHLH 68 V +KV+ LVG GK++LL V A + + T+ + G+ + Sbjct: 152 VLELKVLADVGLVGFPSVGKSTLLSVVSSAKPKIADYHFTTLVPNLGMVETDDGRSFVMA 211 Query: 69 IWD----TAGQDDYDRLRPLFYPDAS---VLLLCFDVT---SPNSFDN--IFNRWYPEVN 116 D G L F V++ D++ + +D+ N+ E N Sbjct: 212 --DLPGLIEGAHQGVGLGHQFLRHIERTRVIVHVIDMSGLEGRDPYDDYLTINQELSEYN 269 Query: 117 HFCKKVPIIVVGCKTDLCKDKSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLH 176 + P I+V K D+ + + + + SA Sbjct: 270 LRLTERPQIIVANKMDMPEAAENLEAFKEKLTD---------------DYPVFPISAVTR 314 Query: 177 DNVHAVFQEAAEVALSSRGRNFWRRIT 203 + + + E A ++ + Sbjct: 315 EGLRELLFEVANQLENTPEFPLYDEEE 341 >4TN1-B nrPDB Length = 345 Score = 39.1 bits (90), Expect = 0.002, Method: Composition-based stats. Identities = 36/225 (16%), Positives = 63/225 (28%), Gaps = 54/225 (24%) Query: 20 VVLVGDGGCGKTSLLMVF------------ADGAFPESYTPTVFERYMVNLQV--KGK-P 64 ++G GKT LL +Y P V V GK Sbjct: 13 CCILGHVRTGKTKLLDKIRQTNVQEGEAGGITQQIGATYFP-VEAIKQKTAVVNKDGKFE 71 Query: 65 VH---LHIWDTAGQDDYDRLRPLFYPDASVLLLCFDVT---SPNSFDNIFNRWYPEVNHF 118 L I DT G + + LR ++ +L D+ P + +++ R E Sbjct: 72 FKVPGLLIIDTPGHESFSNLRSRGSSLCNIAILVVDIMHGLEPQTIESL--RLLRERK-- 127 Query: 119 CKKVPIIVVGCKTD------------LCKDKSLVNKLRRNGLEPVTYHRGQEMARS-VGA 165 P +V K D + +L NK +N + A + Sbjct: 128 ---TPFVVALNKIDRLYGWKKIENNGFRESFALQNKAVQNEFRNRLDQVKLQFAEQGFNS 184 Query: 166 VAYLE------------CSARLHDNVHAVFQEAAEVALSSRGRNF 198 + E SA + + + + ++ + Sbjct: 185 ELFYENKNFARYVSLVPTSAHTGEGIPDMLKLIVQLCQERMASSL 229 >5YT0-A nrPDB Length = 364 Score = 38.7 bits (89), Expect = 0.002, Method: Composition-based stats. Identities = 32/150 (21%), Positives = 48/150 (32%), Gaps = 27/150 (18%) Query: 3 AAQAAGEEAPPGVRSVKVVLVGDGGCGKTSLLMVF------------ADGAFPESYTPTV 50 A G + +R VV++G GKT+LL S P Sbjct: 2 AGDKGGGDGERRLRQPIVVVLGHVDHGKTTLLDKIRRTAVAAKEAGGITQHIGASIVPAD 61 Query: 51 FERYMVNLQVKGKPVHLHI-----WDTAGQDDYDRLRPLFYPDASVLLLCFDVT---SPN 102 + K PV L I DT G + + LR A +L D+ P Sbjct: 62 VIEKIAEPLKKVIPVKLVIPGLLFIDTPGHELFSNLRRRGGSVADFAILVVDIMEGFKPQ 121 Query: 103 SFDNIFNRWYPEVNHFCKKVPIIVVGCKTD 132 +++ + E VP ++ K D Sbjct: 122 TYEAL--ELLKERR-----VPFLIAANKID 144 >1ZCB-A nrPDB Length = 362 Score = 38.7 bits (89), Expect = 0.002, Method: Composition-based stats. Identities = 18/70 (25%), Positives = 30/70 (42%), Gaps = 10/70 (14%) Query: 9 EEAPPGVRSVKVVLVGDGGCGKTSLLMVF-------ADGAFPESYTPTVFER--YMVNLQ 59 E+ R VK++L+G G GK++ L D E + PT++ + + Sbjct: 25 EDGERSARLVKILLLGAGESGKSTFLKQMRIIHGQDFDQRAREEFRPTIYSNVIKGMRVL 84 Query: 60 VKGKPVHLHI 69 V + LHI Sbjct: 85 VDARE-KLHI 93 Score = 31.0 bits (69), Expect = 0.40, Method: Composition-based stats. Identities = 31/167 (18%), Positives = 53/167 (31%), Gaps = 37/167 (22%) Query: 63 KPVHLHIWDTAGQ--DDYDRLRPLFYPDASVLLLC---FD---VTSPNS---------FD 105 K V + D GQ + + + L+ FD + + F+ Sbjct: 199 KNVPFKMVDVGGQRSERKRWFECFDSVTSILFLVSSSEFDQVLMEDRQTNRLTESLNIFE 258 Query: 106 NIFNRWYPEVNHFCKKVPIIVVGCKTDLCKDKSLVNK--------------LRRNGLEPV 151 I N N V II+ KTDL ++K V LR V Sbjct: 259 TIVN------NRVFSNVSIILFLNKTDLLEEKVQVVSIKDYFLEFEGDPHCLRDVQKFLV 312 Query: 152 TYHRGQEMARSVGAVAYLECSARLHDNVHAVFQEAAEVALSSRGRNF 198 RG+ + + + +A +N+ VF++ + L + Sbjct: 313 ECFRGKRRDQQQRPLYHHFTTAINTENIRLVFRDVKDTILHDNLKQL 359 >4NCL-A nrPDB Length = 457 Score = 38.7 bits (89), Expect = 0.002, Method: Composition-based stats. Identities = 36/225 (16%), Positives = 63/225 (28%), Gaps = 54/225 (24%) Query: 20 VVLVGDGGCGKTSLLMVF------------ADGAFPESYTPTVFERYMVNLQV--KGK-P 64 ++G GKT LL +Y P V V GK Sbjct: 13 CCILGHVDTGKTKLLDKIRQTNVQEGEAGGITQQIGATYFP-VEAIKQKTAVVNKDGKFE 71 Query: 65 VH---LHIWDTAGQDDYDRLRPLFYPDASVLLLCFDVT---SPNSFDNIFNRWYPEVNHF 118 L I DT G + + LR ++ +L D+ P + +++ R E Sbjct: 72 FKVPGLLIIDTPGHESFSNLRSRGSSLCNIAILVVDIMHGLEPQTIESL--RLLRERK-- 127 Query: 119 CKKVPIIVVGCKTD------------LCKDKSLVNKLRRNGLEPVTYHRGQEMARS-VGA 165 P +V K D + +L NK +N + A + Sbjct: 128 ---TPFVVALNKIDRLYGWKKIENNGFRESFALQNKAVQNEFRNRLDQVKLQFAEQGFNS 184 Query: 166 VAYLE------------CSARLHDNVHAVFQEAAEVALSSRGRNF 198 + E SA + + + + ++ + Sbjct: 185 ELFYENKNFARYVSLVPTSAHTGEGIPDMLKLIVQLCQERMASSL 229 >4N3G-A nrPDB Length = 603 Score = 38.7 bits (89), Expect = 0.002, Method: Composition-based stats. Identities = 36/225 (16%), Positives = 63/225 (28%), Gaps = 54/225 (24%) Query: 20 VVLVGDGGCGKTSLLMVF------------ADGAFPESYTPTVFERYMVNLQV--KGK-P 64 ++G GKT LL +Y P V V GK Sbjct: 13 CCILGHVDTGKTKLLDKIRQTNVQEGEAGGITQQIGATYFP-VEAIKQKTAVVNKDGKFE 71 Query: 65 VH---LHIWDTAGQDDYDRLRPLFYPDASVLLLCFDVT---SPNSFDNIFNRWYPEVNHF 118 L I DT G + + LR ++ +L D+ P + +++ R E Sbjct: 72 FKVPGLLIIDTPGHESFSNLRSRGSSLCNIAILVVDIMHGLEPQTIESL--RLLRERK-- 127 Query: 119 CKKVPIIVVGCKTD------------LCKDKSLVNKLRRNGLEPVTYHRGQEMARS-VGA 165 P +V K D + +L NK +N + A + Sbjct: 128 ---TPFVVALNKIDRLYGWKKIENNGFRESFALQNKAVQNEFRNRLDQVKLQFAEQGFNS 184 Query: 166 VAYLE------------CSARLHDNVHAVFQEAAEVALSSRGRNF 198 + E SA + + + + ++ + Sbjct: 185 ELFYENKNFARYVSLVPTSAHTGEGIPDMLKLIVQLCQERMASSL 229 >5FG3-A nrPDB Length = 623 Score = 38.3 bits (88), Expect = 0.002, Method: Composition-based stats. Identities = 32/150 (21%), Positives = 48/150 (32%), Gaps = 27/150 (18%) Query: 3 AAQAAGEEAPPGVRSVKVVLVGDGGCGKTSLLMVF------------ADGAFPESYTPTV 50 A G + +R VV++G GKT+LL S P Sbjct: 2 AGDKGGGDGERRLRQPIVVVLGHVDHGKTTLLDKIRRTAVAAKEAGGITQHIGASIVPAD 61 Query: 51 FERYMVNLQVKGKPVHLHI-----WDTAGQDDYDRLRPLFYPDASVLLLCFDVT---SPN 102 + K PV L I DT G + + LR A +L D+ P Sbjct: 62 VIEKIAEPLKKVIPVKLVIPGLLFIDTPGHELFSNLRRRGGSVADFAILVVDIMEGFKPQ 121 Query: 103 SFDNIFNRWYPEVNHFCKKVPIIVVGCKTD 132 +++ + E VP ++ K D Sbjct: 122 TYEAL--ELLKERR-----VPFLIAANKID 144 >6OIK-A nrPDB Length = 354 Score = 38.3 bits (88), Expect = 0.002, Method: Composition-based stats. Identities = 33/183 (18%), Positives = 58/183 (31%), Gaps = 31/183 (16%) Query: 45 SYTPTVFERYMVNLQVKG--------KPVHLHIWDTAGQDDYDRLRPLFYPDASVLLLC- 95 Y PT + ++ G K +H ++D GQ + + D + ++ C Sbjct: 167 DYQPTEQDILRTRVKTTGIVETHFTFKNLHFRLFDVGGQRSERKKWIHCFEDVTAIIFCV 226 Query: 96 ----FD-VTSPNSFDNIFNRWYPEVNHFCKK-----VPIIVVGCKTDLCKDKSLVNKLR- 144 +D V + N + + C II+ K DL +K + L Sbjct: 227 ALSGYDQVLHEDETTNRMHESLMLFDSICNNKFFIDTSIILFLNKKDLFGEKIKKSPLTI 286 Query: 145 --RNGLEPVTYHRGQEM--------ARSVGAVAYLE-CSARLHDNVHAVFQEAAEVALSS 193 P TY RS Y A +N+ VF ++ +++ Sbjct: 287 CFPEYTGPNTYEDAAAYIQAQFESKNRSPNKEIYCHMTCATDTNNIQVVFDAVTDIIIAN 346 Query: 194 RGR 196 R Sbjct: 347 NLR 349 Score = 35.2 bits (80), Expect = 0.019, Method: Composition-based stats. Identities = 24/100 (24%), Positives = 39/100 (39%), Gaps = 18/100 (18%) Query: 9 EEAPPGVRSVKVVLVGDGGCGKTSLLMVF-------ADGAFPESYTPTVFERYMVNLQVK 61 E+ + VK++L+G G GK++++ G + Y P V Y +Q Sbjct: 25 EDGISAAKDVKLLLLGAGESGKSTIVKQMKIIHEDGFSGEDVKQYKPVV---YSNTIQSL 81 Query: 62 GKPVHLHIWDTAGQDDYDRLRPLFYPDASVLLLCFDVTSP 101 V DT G + D+ A ++C DV S Sbjct: 82 AAIVRA--MDTLGIEYGDKE-----RKADAKMVC-DVVSR 113 >2QAG-C nrPDB Length = 418 Score = 37.9 bits (87), Expect = 0.003, Method: Composition-based stats. Identities = 18/67 (26%), Positives = 30/67 (44%), Gaps = 9/67 (13%) Query: 17 SVKVVLVGDGGCGKTSLLMV-FADGAFPESY-------TPTV-FERYMVNLQVKGKPVHL 67 +++VG+ G GK++L+ F + Y TV E+ V ++ G + L Sbjct: 31 EFTLMVVGESGLGKSTLINSLFLTDLYSPEYPGPSHRIKKTVQVEQSKVLIKEGGVQLLL 90 Query: 68 HIWDTAG 74 I DT G Sbjct: 91 TIVDTPG 97 >5CYO-A nrPDB Length = 274 Score = 37.9 bits (87), Expect = 0.003, Method: Composition-based stats. Identities = 17/68 (25%), Positives = 29/68 (42%), Gaps = 10/68 (14%) Query: 17 SVKVVLVGDGGCGKTSLLMVFADGAFP-ESYTPTVFERYMVNLQV---------KGKPVH 66 +++VG G GK++L+ +S PT ER +++ KG + Sbjct: 4 EFNIMVVGQSGLGKSTLINTLFKSKISRKSVQPTSEERIPKTIEIKSITHDIEEKGVRMK 63 Query: 67 LHIWDTAG 74 L + DT G Sbjct: 64 LTVIDTPG 71 >3GEE-A nrPDB Length = 476 Score = 37.9 bits (87), Expect = 0.003, Method: Composition-based stats. Identities = 23/121 (19%), Positives = 39/121 (32%), Gaps = 12/121 (9%) Query: 21 VLVGDGGCGKTSLLMVFA-DGAFPESYTPTVFERYMVNLQVKGKPVHLHIWDTAGQDDYD 79 V+ G GK++LL S+ P Y+ + K + DTAG + Sbjct: 237 VIAGKPNAGKSTLLNTLLGQERAIVSHMPGTTRDYIEECFIHDKT-MFRLTDTAGLREAG 295 Query: 80 ------RLRPLFYPDASVLLLCF--DVTSPNSFDNIFNRWYPEVNHFCKKVPIIVVGCKT 131 +R A L+ + D+ + D + E+ + V K Sbjct: 296 EEIEHEGIRRSRMKMAEADLILYLLDLGTERLDDELTE--IRELKAAHPAAKFLTVANKL 353 Query: 132 D 132 D Sbjct: 354 D 354 >3H2Y-A nrPDB Length = 368 Score = 37.6 bits (86), Expect = 0.004, Method: Composition-based stats. Identities = 17/89 (19%), Positives = 32/89 (35%), Gaps = 16/89 (17%) Query: 94 LCFDVTSPNSFDNIFNRWYPEVNHFCKKVPIIVVGCKTDLCKDKSLVNK----------- 142 L + F+ W P ++ F +++VG K DL +K Sbjct: 72 LVVKIVDIFDFN---GSWLPGLHRFVGNNKVLLVGNKADLIPKSVKHDKVKHWMRYSAKQ 128 Query: 143 --LRRNGLEPVTYHRGQEMARSVGAVAYL 169 L+ + ++ +GQ +A A+ Y Sbjct: 129 LGLKPEDVFLISAAKGQGIAELADAIEYY 157 >3LLU-A nrPDB Length = 196 Score = 37.2 bits (85), Expect = 0.005, Method: Composition-based stats. Identities = 18/86 (20%), Positives = 31/86 (36%), Gaps = 10/86 (11%) Query: 19 KVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMVNLQVKG----KPVHLHIWDTAG 74 +++L+G GK+S+ V P T+F + V+ IWD G Sbjct: 22 RILLMGLRRSGKSSIQKVVFHKMSPNE---TLFLESTNKIYKDDISNSSFVNFQIWDFPG 78 Query: 75 QDDYDRLRPLF---YPDASVLLLCFD 97 Q D+ + + L+ D Sbjct: 79 QMDFFDPTFDYEMIFRGTGALIYVID 104 >2BCJ-Q nrPDB Length = 353 Score = 37.2 bits (85), Expect = 0.005, Method: Composition-based stats. Identities = 28/188 (14%), Positives = 58/188 (30%), Gaps = 34/188 (18%) Query: 43 PESYTPTVFERYMVNLQVKG--------KPVHLHIWDTAGQ--DDYDRLRPLFYPDASVL 92 SY PT + V + G + V + D GQ + + + + Sbjct: 163 DPSYLPTQQDVLRVRVPTTGIIEYPFDLQSVIFRMVDVGGQRSERRKWIHCFENVTSIMF 222 Query: 93 LLC---FD-----VTSPNSFDNIFNRWYPEVNHFC--KKVPIIVVGCKTDLCKDKSLVNK 142 L+ +D + N + + + + + +I+ K DL ++K + + Sbjct: 223 LVALSEYDQVLVESDNENRMEE-SKALFRTIITYPWFQNSSVILFLNKKDLLEEKIMYSH 281 Query: 143 LRRNGLEPVTYHRGQEMARSVGAVAYLE-------------CSARLHDNVHAVFQEAAEV 189 L E R + AR +++ A +N+ VF + Sbjct: 282 LVDYFPEYDGPQRDAQAAREFILKMFVDLNPDSDKIIYSHFTCATDTENIRFVFAAVKDT 341 Query: 190 ALSSRGRN 197 L + Sbjct: 342 ILQLNLKE 349 Score = 32.9 bits (74), Expect = 0.099, Method: Composition-based stats. Identities = 8/28 (28%), Positives = 16/28 (57%) Query: 9 EEAPPGVRSVKVVLVGDGGCGKTSLLMV 36 E+ R +K++L+G G GK++ + Sbjct: 25 EDGERSRRELKLLLLGTGESGKSTFIKQ 52 >4QJ3-A nrPDB Length = 379 Score = 37.2 bits (85), Expect = 0.006, Method: Composition-based stats. Identities = 28/188 (14%), Positives = 58/188 (30%), Gaps = 34/188 (18%) Query: 43 PESYTPTVFERYMVNLQVKG--------KPVHLHIWDTAGQ--DDYDRLRPLFYPDASVL 92 SY PT + V + G + V + D GQ + + + + Sbjct: 189 DPSYLPTQQDVLRVRVPTTGIIEYPFDLQSVIFRMVDVGGQRSERRKWIHCFENVTSIMF 248 Query: 93 LLC---FD-----VTSPNSFDNIFNRWYPEVNHFC--KKVPIIVVGCKTDLCKDKSLVNK 142 L+ +D + N + + + + + +I+ K DL ++K + + Sbjct: 249 LVALSEYDQVLVESDNENRMEE-SKALFRTIITYPWFQNSSVILFLNKKDLLEEKIMYSH 307 Query: 143 LRRNGLEPVTYHRGQEMARSVGAVAYLE-------------CSARLHDNVHAVFQEAAEV 189 L E R + AR +++ A +N+ VF + Sbjct: 308 LVDYFPEYDGPQRDAQAAREFILKMFVDLNPDSDKIIYSHFTCATDTENIRFVFAAVKDT 367 Query: 190 ALSSRGRN 197 L + Sbjct: 368 ILQLNLKE 375 Score = 31.0 bits (69), Expect = 0.34, Method: Composition-based stats. Identities = 7/21 (33%), Positives = 14/21 (66%) Query: 16 RSVKVVLVGDGGCGKTSLLMV 36 R +K++L+G G GK++ + Sbjct: 58 RELKLLLLGTGESGKSTFIKQ 78 >5KH0-A nrPDB Length = 396 Score = 36.8 bits (84), Expect = 0.007, Method: Composition-based stats. Identities = 22/137 (16%), Positives = 46/137 (33%), Gaps = 20/137 (14%) Query: 20 VVLVGDGGCGKTSLLMVFADGA---FPESYTPTVFERYMVNLQVKGKPVHLHIWDTAGQD 76 + + G GK+S + T + P+ L DT G D Sbjct: 11 IAITGRRNVGKSSFMNALIGQEVSIVSNVAGTTTDPVFKSMELSPVGPITLI--DTPGLD 68 Query: 77 DYDRL--------RPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVNHFCKKVPIIVVG 128 D L + Y +L+ D+ P +F+ + + E+ ++P + Sbjct: 69 DVGELGIKRIKKAKKSLYRADCGILIVDDI--PGNFEEQIIKLFKEL-----EIPYFIAI 121 Query: 129 CKTDLCKDKSLVNKLRR 145 K D +++ + ++ Sbjct: 122 NKIDTIDHENIEKEYKK 138 >5IRR-A nrPDB Length = 308 Score = 36.4 bits (83), Expect = 0.008, Method: Composition-based stats. Identities = 14/41 (34%), Positives = 21/41 (51%), Gaps = 6/41 (14%) Query: 15 VRSVKVVLVGDGGCGKTSLLMVFAD------GAFPESYTPT 49 + +K+++VGD G GKT+L+ SYTPT Sbjct: 24 KKYIKLIVVGDSGLGKTTLIKSLISIPGERLQVHDGSYTPT 64 >4V8Y-CP nrPDB Length = 339 Score = 36.4 bits (83), Expect = 0.009, Method: Composition-based stats. Identities = 31/186 (16%), Positives = 57/186 (30%), Gaps = 30/186 (16%) Query: 20 VVLVGDGGCGKTSLLMVF------------ADGAFPESYTPTVFERYMVNLQVKGKPVHL 67 ++G GKT LL +Y P + + + + Sbjct: 8 CCILGHVDTGKTKLLDKIRQTNVQGGEAGGITQQIGATYFPIDAIKAKTKVMAEYEKQTF 67 Query: 68 HI-----WDTAGQDDYDRLRPLFYPDASVLLLCFDVT---SPNSFDNIFNRWYPEVNHFC 119 + DT G + + LR ++ +L D+ + ++I + + Sbjct: 68 DVPGLLVIDTPGHESFSNLRSRGSSLCNIAILVIDIMHGLEQQTIESI--KLLRDRK--- 122 Query: 120 KKVPIIVVGCKTD-LCKDKSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDN 178 P +V K D L K++ N R+ + +E + LE A N Sbjct: 123 --APFVVALNKIDRLYDWKAIPNNSFRDSFAKQSRAVQEEFQSRYSKIQ-LEL-AEQGLN 178 Query: 179 VHAVFQ 184 FQ Sbjct: 179 SELYFQ 184 >1TAG-A nrPDB Length = 324 Score = 36.4 bits (83), Expect = 0.009, Method: Composition-based stats. Identities = 29/190 (15%), Positives = 58/190 (30%), Gaps = 44/190 (23%) Query: 46 YTPTVFERYMVNLQVKG--------KPVHLHIWDTAGQDDYDRLRPLFYPDASVLLLC-- 95 Y PT + ++ G K ++ ++D GQ + + + ++ Sbjct: 137 YVPTEQDVLRSRVKTTGIIETQFSFKDLNFRMFDVGGQRSERKKWIHCFEGVTCIIFIAA 196 Query: 96 ---FD--------VTSPNSFDNIFNRWYPEVNHFCKKVPIIVVGCKTDLCKDKSLVNKLR 144 +D V + ++FN + I++ K D+ +K L Sbjct: 197 LSAYDMVLVEDDEVNRMHESLHLFNSICNH--RYFATTSIVLFLNKKDVFSEKIKKAHLS 254 Query: 145 ---RNGLEPVTYHRGQEMARSVGAVAYLE--------------CSARLHDNVHAVFQEAA 187 + P TY A + V +LE A NV VF Sbjct: 255 ICFPDYNGPNTYED----AGNYIKVQFLELNMRRDVKEIYSHMTCATDTQNVKFVFDAVT 310 Query: 188 EVALSSRGRN 197 ++ + ++ Sbjct: 311 DIIIKENLKD 320 Score = 31.0 bits (69), Expect = 0.35, Method: Composition-based stats. Identities = 8/22 (36%), Positives = 16/22 (72%) Query: 15 VRSVKVVLVGDGGCGKTSLLMV 36 R+VK++L+G G GK++++ Sbjct: 1 ARTVKLLLLGAGESGKSTIVKQ 22 >4NCF-A nrPDB Length = 457 Score = 36.4 bits (83), Expect = 0.010, Method: Composition-based stats. Identities = 31/186 (16%), Positives = 57/186 (30%), Gaps = 30/186 (16%) Query: 20 VVLVGDGGCGKTSLLMVF------------ADGAFPESYTPTVFERYMVNLQVKGKPVHL 67 ++G GKT LL +Y P + + + + Sbjct: 13 CCILGHVDTGKTKLLDKIRQTNVQGGEAGGITQQIGATYFPIDAIKAKTKVMAEYEKQTF 72 Query: 68 HI-----WDTAGQDDYDRLRPLFYPDASVLLLCFDVT---SPNSFDNIFNRWYPEVNHFC 119 + DT G + + LR ++ +L D+ + ++I + + Sbjct: 73 DVPGLLVIDTPGHESFSNLRSRGSSLCNIAILVIDIMHGLEQQTIESI--KLLRDRK--- 127 Query: 120 KKVPIIVVGCKTD-LCKDKSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDN 178 P +V K D L K++ N R+ + +E + LE A N Sbjct: 128 --APFVVALNKIDRLYDWKAIPNNSFRDSFAKQSRAVQEEFQSRYSKIQ-LEL-AEQGLN 183 Query: 179 VHAVFQ 184 FQ Sbjct: 184 SELYFQ 189 >3WBI-A nrPDB Length = 606 Score = 36.0 bits (82), Expect = 0.011, Method: Composition-based stats. Identities = 31/186 (16%), Positives = 57/186 (30%), Gaps = 30/186 (16%) Query: 20 VVLVGDGGCGKTSLLMVF------------ADGAFPESYTPTVFERYMVNLQVKGKPVHL 67 ++G GKT LL +Y P + + + + Sbjct: 12 CCILGHVDTGKTKLLDKIRQTNVQGGEAGGITQQIGATYFPIDAIKAKTKVMAEYEKQTF 71 Query: 68 HI-----WDTAGQDDYDRLRPLFYPDASVLLLCFDVT---SPNSFDNIFNRWYPEVNHFC 119 + DT G + + LR ++ +L D+ + ++I + + Sbjct: 72 DVPGLLVIDTPGHESFSNLRSRGSSLCNIAILVIDIMHGLEQQTIESI--KLLRDRK--- 126 Query: 120 KKVPIIVVGCKTD-LCKDKSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDN 178 P +V K D L K++ N R+ + +E + LE A N Sbjct: 127 --APFVVALNKIDRLYDWKAIPNNSFRDSFAKQSRAVQEEFQSRYSKIQ-LEL-AEQGLN 182 Query: 179 VHAVFQ 184 FQ Sbjct: 183 SELYFQ 188 >4V8Z-CV nrPDB Length = 586 Score = 36.0 bits (82), Expect = 0.012, Method: Composition-based stats. Identities = 31/186 (16%), Positives = 57/186 (30%), Gaps = 30/186 (16%) Query: 20 VVLVGDGGCGKTSLLMVF------------ADGAFPESYTPTVFERYMVNLQVKGKPVHL 67 ++G GKT LL +Y P + + + + Sbjct: 8 CCILGHVDTGKTKLLDKIRQTNVQGGEAGGITQQIGATYFPIDAIKAKTKVMAEYEKQTF 67 Query: 68 HI-----WDTAGQDDYDRLRPLFYPDASVLLLCFDVT---SPNSFDNIFNRWYPEVNHFC 119 + DT G + + LR ++ +L D+ + ++I + + Sbjct: 68 DVPGLLVIDTPGHESFSNLRSRGSSLCNIAILVIDIMHGLEQQTIESI--KLLRDRK--- 122 Query: 120 KKVPIIVVGCKTD-LCKDKSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDN 178 P +V K D L K++ N R+ + +E + LE A N Sbjct: 123 --APFVVALNKIDRLYDWKAIPNNSFRDSFAKQSRAVQEEFQSRYSKIQ-LEL-AEQGLN 178 Query: 179 VHAVFQ 184 FQ Sbjct: 179 SELYFQ 184 >6OIJ-A nrPDB Length = 353 Score = 35.6 bits (81), Expect = 0.014, Method: Composition-based stats. Identities = 28/185 (15%), Positives = 57/185 (30%), Gaps = 34/185 (18%) Query: 46 YTPTVFERYMVNLQVKG--------KPVHLHIWDTAGQ--DDYDRLRPLFYPDASVLLLC 95 Y PT + V + G + + + D GQ + + + + L+ Sbjct: 166 YLPTQQDVLRVRVPTTGIIEYPFDLENIIFRMVDVGGQRSERRKWIHCFENVTSIMFLVA 225 Query: 96 ---FD-----VTSPNSFDNIFNRWYPEVNHFC--KKVPIIVVGCKTDLCKDKSLVNKLRR 145 +D + N + + + + + +I+ K DL +DK L + L Sbjct: 226 LSEYDQVLVESDNENRMEE-SKALFRTIITYPWFQNSSVILFLNKKDLLEDKILYSHLVD 284 Query: 146 NGLEPVTYHRGQEMARSVGAVAYLE-------------CSARLHDNVHAVFQEAAEVALS 192 E R + AR +++ A +N+ VF + L Sbjct: 285 YFPEFDGPQRDAQAAREFILKMFVDLNPDSDKIIYSHFTCATDTENIRFVFAAVKDTILQ 344 Query: 193 SRGRN 197 + Sbjct: 345 LNLKE 349 Score = 32.2 bits (72), Expect = 0.17, Method: Composition-based stats. Identities = 8/28 (28%), Positives = 16/28 (57%) Query: 9 EEAPPGVRSVKVVLVGDGGCGKTSLLMV 36 E+ R +K++L+G G GK++ + Sbjct: 25 EDGEKARRELKLLLLGTGESGKSTFIKQ 52 >6F1T-i nrPDB Length = 492 Score = 35.2 bits (80), Expect = 0.022, Method: Composition-based stats. Identities = 16/90 (17%), Positives = 32/90 (35%), Gaps = 2/90 (2%) Query: 98 VTSPNSFDNIFNRWYPEVNHFCKKVPIIVVGCKTDLCKDKSLVNKLRRNGLEPVTYHRGQ 157 +TS + +N+ V +P++VV K D + R L+ + H + Sbjct: 201 LTSGSDEENVALPLGDNVLTHNLGIPVLVVCTKCDAVSVLEKEHDYRDEHLDFIQSHL-R 259 Query: 158 EMARSVGAVAYLECSARLHDNVHAVFQEAA 187 GA S + N+ +++ Sbjct: 260 RFCLQYGAALIY-TSVKEEKNLDLLYKYIV 288 Score = 29.9 bits (66), Expect = 0.84, Method: Composition-based stats. Identities = 26/184 (14%), Positives = 60/184 (32%), Gaps = 18/184 (9%) Query: 1 MTAAQAAGEEAPPGVRSVKVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMVNLQV 60 ++ P + +++ G+ G GKT+L+ + + V+ + Sbjct: 40 LSEVSTRARSKLPSGK--NILVFGEDGSGKTTLMTKLQGAEHGKKGRGLEYLYLSVHDED 97 Query: 61 KGKPVHLHIWDTAGQDDYDRLRPLFYPDAS-----VLLLCFDVTSPNSFDNIFNRWYPEV 115 + ++W G D Y + F A +++ D++ P + +W + Sbjct: 98 RDDHTRCNVWILDG-DLYHKGLLKFAVSAESLPETLVIFVADMSRPWTVMESLQKWASVL 156 Query: 116 NHFCKKVPIIVVGCKTDLCKDKSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARL 175 K+ K K + L K ++ + + G + + S Sbjct: 157 REHIDKM-------KIPPEKMRELERKFVKDFQDYMEPEEGCQGSPQRRGPL---TSGSD 206 Query: 176 HDNV 179 +NV Sbjct: 207 EENV 210 >6F1Y-j nrPDB Length = 337 Score = 35.2 bits (80), Expect = 0.023, Method: Composition-based stats. Identities = 16/90 (17%), Positives = 32/90 (35%), Gaps = 2/90 (2%) Query: 98 VTSPNSFDNIFNRWYPEVNHFCKKVPIIVVGCKTDLCKDKSLVNKLRRNGLEPVTYHRGQ 157 +TS + +N+ V +P++VV K D + R L+ + H + Sbjct: 165 LTSGSDEENVALPLGDNVLTHNLGIPVLVVCTKCDAVSVLEKEHDYRDEHLDFIQSHL-R 223 Query: 158 EMARSVGAVAYLECSARLHDNVHAVFQEAA 187 GA S + N+ +++ Sbjct: 224 RFCLQYGAALIY-TSVKEEKNLDLLYKYIV 252 Score = 29.9 bits (66), Expect = 0.85, Method: Composition-based stats. Identities = 26/184 (14%), Positives = 60/184 (32%), Gaps = 18/184 (9%) Query: 1 MTAAQAAGEEAPPGVRSVKVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMVNLQV 60 ++ P + +++ G+ G GKT+L+ + + V+ + Sbjct: 4 LSEVSTRARSKLPSGK--NILVFGEDGSGKTTLMTKLQGAEHGKKGRGLEYLYLSVHDED 61 Query: 61 KGKPVHLHIWDTAGQDDYDRLRPLFYPDAS-----VLLLCFDVTSPNSFDNIFNRWYPEV 115 + ++W G D Y + F A +++ D++ P + +W + Sbjct: 62 RDDHTRCNVWILDG-DLYHKGLLKFAVSAESLPETLVIFVADMSRPWTVMESLQKWASVL 120 Query: 116 NHFCKKVPIIVVGCKTDLCKDKSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARL 175 K+ K K + L K ++ + + G + + S Sbjct: 121 REHIDKM-------KIPPEKMRELERKFVKDFQDYMEPEEGCQGSPQRRGPL---TSGSD 170 Query: 176 HDNV 179 +NV Sbjct: 171 EENV 174 >6D9H-A nrPDB Length = 355 Score = 34.9 bits (79), Expect = 0.024, Method: Composition-based stats. Identities = 33/194 (17%), Positives = 60/194 (30%), Gaps = 48/194 (24%) Query: 44 ESYTPTVFERYMVNLQVKG--------KPVHLHIWDTAGQDDYDRLRPLFYPDASVLLLC 95 Y PT + ++ G K +H ++D Q + + + ++ C Sbjct: 166 SDYIPTQQDVLRTRVKTTGIVETHFTFKDLHFKMFDVGAQRSERKKWIHCFEGVTAIIFC 225 Query: 96 -----FDV------------TSPNSFDNI-FNRWYPEVNHFCKKVPIIVVGCKTDLCKDK 137 +D+ S FD+I N+W+ II+ K DL ++K Sbjct: 226 VALSAYDLVLAEDEEMNRMHASMKLFDSICNNKWFT-------DTSIILFLNKKDLFEEK 278 Query: 138 SLVNKLRRNGLEPV---TYHRGQEMARSVGA-----------VAYLECSARLHDNVHAVF 183 + L E Y +S + CS NV VF Sbjct: 279 ITHSPLTICFPEYTGANKYDEAASYIQSKFEDLNKRKDTKEIYTHFTCS-TDTKNVQFVF 337 Query: 184 QEAAEVALSSRGRN 197 +V + + ++ Sbjct: 338 DAVTDVIIKNNLKD 351 Score = 31.0 bits (69), Expect = 0.35, Method: Composition-based stats. Identities = 9/28 (32%), Positives = 16/28 (57%) Query: 9 EEAPPGVRSVKVVLVGDGGCGKTSLLMV 36 E+ R VK++L+G G GK +++ Sbjct: 25 EDGEKAAREVKLLLLGAGESGKNTIVKQ 52 >5NON-A nrPDB Length = 165 Score = 34.9 bits (79), Expect = 0.026, Method: Composition-based stats. Identities = 16/36 (44%), Positives = 19/36 (52%), Gaps = 2/36 (5%) Query: 12 PPGVRSVKVVLVGDGGCGKTSLLMVFADGAFPESYT 47 PG K+ ++GDGG G T L M F G FP Y Sbjct: 45 LPGAFE-KLEIIGDGGVG-TILDMTFVPGEFPHEYK 78 >4DCU-A nrPDB Length = 456 Score = 34.9 bits (79), Expect = 0.026, Method: Composition-based stats. Identities = 26/145 (17%), Positives = 42/145 (28%), Gaps = 19/145 (13%) Query: 18 VKVVLVGDGGCGKTSLLMVFADGA--FPESYTPTVFERYMVNLQVKGKPVHLHIWDTAG- 74 ++ L+G GK+SL+ + T + + + I DTAG Sbjct: 196 IQFCLIGRPNVGKSSLVNAMLGEERVIVSNVAGTTRDAVDTSFTYNQQE--FVIVDTAGM 253 Query: 75 ---------QDDYDRLRPL-FYPDASVLLLCFDVTSPNSFDNIFNRWYPEVNHFCKKVPI 124 + Y LR L + V+ + D + H K + Sbjct: 254 RKKGKVYETTEKYSVLRALKAIDRSEVVAVVLDGEEGIIEQDKR---IAGYAHEAGKAVV 310 Query: 125 IVVGCKTDLCKDKSLVNKLRRNGLE 149 IVV K D K + Sbjct: 311 IVV-NKWDAVDKDESTMKEFEENIR 334 Score = 31.4 bits (70), Expect = 0.28, Method: Composition-based stats. Identities = 20/143 (13%), Positives = 45/143 (31%), Gaps = 14/143 (9%) Query: 10 EAPPGVRSVK--VVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMVNLQVKGKPVHL 67 P G K V +VG GK+++ A R + + Sbjct: 14 LVPRGSHMGKPVVAIVGRPNVGKSTIFNRIAGERISIVEDTPGVTRDRIYSSAEWLNYDF 73 Query: 68 HIWDTAG--------QDDYDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVNHFC 119 ++ DT G + + +A V++ + + ++ + Sbjct: 74 NLIDTGGIDIGDEPFLAQIRQQAEIAMDEADVIIFM---VNGREGVTAADEEVAKILYRT 130 Query: 120 KKVPIIVVGCKTDLCKDKSLVNK 142 KK P+++ K D + ++ + Sbjct: 131 KK-PVVLAVNKLDNTEMRANIYD 152 >2VNE-A nrPDB Length = 201 Score = 34.9 bits (79), Expect = 0.026, Method: Composition-based stats. Identities = 16/36 (44%), Positives = 19/36 (52%), Gaps = 2/36 (5%) Query: 12 PPGVRSVKVVLVGDGGCGKTSLLMVFADGAFPESYT 47 PG K+ ++GDGG G T L M F G FP Y Sbjct: 61 LPGAFE-KLEIIGDGGVG-TILDMTFVPGEFPHEYK 94 >2QTH-A nrPDB Length = 364 Score = 34.9 bits (79), Expect = 0.026, Method: Composition-based stats. Identities = 30/188 (15%), Positives = 63/188 (33%), Gaps = 30/188 (15%) Query: 20 VVLVGDGGCGKTSLLMVFAD-GAFPESYTPTVFERYMVNLQVKGKPVHLHIWDTAGQDD- 77 + +VG GKTSL ++ T + + + + L DT G Sbjct: 182 IGIVGYTNSGKTSLFNSLTGLTQKVDTKLFTTMSPKRYAIPINNRKIML--VDTVGFIRG 239 Query: 78 ---------YDRLRPLFYPDASVLLLCFDVTSPNSF--DNIFNRWYPEVNHFCKKVPIIV 126 + L Y + L+L D T + + + + + PI+V Sbjct: 240 IPPQIVDAFFVTLSEAKY--SDALILVIDSTFSENLLIETLQSSFEILREIGVSGKPILV 297 Query: 127 VGCKTDLCKDKSLVNKLRRNGLEPVTYHRGQEMARSVGAVAY--LECSARLHDNVHAVFQ 184 K D +N L+ V +++++ + + + + SA N+ + Sbjct: 298 TLNKID------KINGDLYKKLDLV-----EKLSKELYSPIFDVIPISALKRTNLELLRD 346 Query: 185 EAAEVALS 192 + ++A Sbjct: 347 KIYQLATQ 354 >6CES-C nrPDB Length = 399 Score = 34.9 bits (79), Expect = 0.027, Method: Composition-based stats. Identities = 18/86 (20%), Positives = 30/86 (34%), Gaps = 10/86 (11%) Query: 19 KVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMVNLQVKG----KPVHLHIWDTAG 74 +++L+G GK S+ V P T+F + V+ IWD G Sbjct: 63 RILLMGLRRSGKNSIQKVVFHKMSPNE---TLFLESTNKIYKDDISNSSFVNFQIWDFPG 119 Query: 75 QDDYDRLRPLF---YPDASVLLLCFD 97 Q D+ + + L+ D Sbjct: 120 QMDFFDPTFDYEMIFRGTGALIYVID 145 >2Q3F-A nrPDB Length = 181 Score = 34.9 bits (79), Expect = 0.027, Method: Composition-based stats. Identities = 27/183 (14%), Positives = 56/183 (30%), Gaps = 18/183 (9%) Query: 19 KVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMVNL----QVKGKPVHLHIWDTAG 74 +++L+G GK+S+ V P T+F + V+ IWD G Sbjct: 6 RILLMGLRRSGKSSIQKVVFHKMSPNE---TLFLESTNKICREDVSNSSFVNFQIWDFPG 62 Query: 75 QDDYDRLRPLF---YPDASVLLLCFDVTSPNSFDNIFNRWYPEVNH---FCKKVPIIVVG 128 Q D+ + + L+ + S + + R + V + V Sbjct: 63 QIDFFDPTFDYEMIFRGTGALIFV--IDSQDDYMEALARLHLTVTRAYKVNTDINFEVFI 120 Query: 129 CKTDLCKDKSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNVHAVFQEAAE 188 K D D + R + + +++ S ++ F + + Sbjct: 121 HKVDGLSDDHKIETQRDIHQRANDDLADAGLEKIH--LSFYLTS-IYDHSIFEAFSKVVQ 177 Query: 189 VAL 191 + Sbjct: 178 KLI 180 >1HEY-A nrPDB Length = 128 Score = 34.9 bits (79), Expect = 0.027, Method: Composition-based stats. Identities = 21/99 (21%), Positives = 37/99 (37%), Gaps = 10/99 (10%) Query: 14 GVRSVKVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMVNLQVKGKPVHLHIW--- 70 + +K ++VG+GG GK+++ + + F + LQ G + W Sbjct: 1 ADKELKFLVVGNGGTGKSTVRNLLKELGFNNVEDAEDGVDALNKLQAGGYGFVISDWNMP 60 Query: 71 --DTAGQDDYDRLRPLFYPDASVLLLCFDVTSPNSFDNI 107 D G + +R A L VT+ +NI Sbjct: 61 NMD--GLELLKTIRA---DGAMSALPVLMVTAEAKKENI 94 >4YMS-J nrPDB Length = 240 Score = 34.5 bits (78), Expect = 0.038, Method: Composition-based stats. Identities = 13/49 (26%), Positives = 25/49 (51%), Gaps = 5/49 (10%) Query: 20 VVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMVNLQVKGKPVHLH 68 VV++G G GK++LL E PT E ++ +++ V+++ Sbjct: 30 VVIIGPSGSGKSTLLR--CINLLEE---PTKGEVFIDGVKINNGKVNIN 73 >1SUL-A nrPDB Length = 195 Score = 34.1 bits (77), Expect = 0.044, Method: Composition-based stats. Identities = 19/126 (15%), Positives = 44/126 (34%), Gaps = 19/126 (15%) Query: 20 VVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMVNLQVKGKPVHLHIWDTAG----- 74 + L G GK+S + + + + +N + LH D G Sbjct: 26 IALAGRSNVGKSSFINSLINRKNLARTSSKPGKTQTLNFYIINDE--LHFVDVPGYGFAK 83 Query: 75 -----QDDYDRLRPLFYPDAS---VLLLCFDVTSPNSFDNIFNRWYPEVNHFCKKVPIIV 126 ++ + R+ + ++ D+ S D++ + + ++ +P+IV Sbjct: 84 VSKSEREAWGRMIETYITTREELKAVVQIVDLRHAPSNDDVQMYEF--LKYYG--IPVIV 139 Query: 127 VGCKTD 132 + K D Sbjct: 140 IATKAD 145 >3K53-A nrPDB Length = 271 Score = 34.1 bits (77), Expect = 0.048, Method: Composition-based stats. Identities = 29/174 (16%), Positives = 52/174 (29%), Gaps = 24/174 (13%) Query: 20 VVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMVNLQVKGKPVHLHIWDTAGQDDYD 79 V LVG+ GKT++ P V + + + D G Sbjct: 6 VALVGNPNVGKTTIFNALTGLRQHVGNWPGVTVEKKEGIMEYREK-EFLVVDLPGIYSLT 64 Query: 80 R------LRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVNHFCKKVPIIVVGCKTDL 133 + F D + ++ D+ K II+V K DL Sbjct: 65 AHSIDELIARNFILDGNADVIV-DIVDSTCLMRNLFLTLELFEMEVKN--IILVLNKFDL 121 Query: 134 CKDKSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNVHAVFQEAA 187 K K + ++M + +G V + +A+ + V + + A Sbjct: 122 LKKKGAKIDI-------------KKMRKELG-VPVIPTNAKKGEGVEELKRMIA 161 >1G7S-A nrPDB Length = 594 Score = 33.7 bits (76), Expect = 0.059, Method: Composition-based stats. Identities = 28/179 (15%), Positives = 51/179 (28%), Gaps = 44/179 (24%) Query: 20 VVLVGDGGCGKTSLL---------MVFADG--------AFPESYTPTVFERYMVNLQVKG 62 V ++G GKT+LL A G P + ++ ++ Sbjct: 8 VSVLGHVDHGKTTLLDHIRGSAVASREAGGITQHIGATEIPMDVIEGICGDFLKKFSIRE 67 Query: 63 KPVHLHIWDTAGQDDYDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVNHFCKKV 122 L DT G + + LR A + +L D+ F + + + Sbjct: 68 TLPGLFFIDTPGHEAFTTLRKRGGALADLAILIVDIN--EGFKPQTQEALNILRMY--RT 123 Query: 123 PIIVVGCKTDLCKDKSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNVHA 181 P +V K D + H G+ ++E ++ V Sbjct: 124 PFVVAANKID--------------RIHGWRVHEGR---------PFMETFSKQDIQVQQ 159 >5VAI-A nrPDB Length = 380 Score = 33.3 bits (75), Expect = 0.068, Method: Composition-based stats. Identities = 33/186 (17%), Positives = 56/186 (30%), Gaps = 45/186 (24%) Query: 54 YMVNLQVKGKPVHLHIWDTAGQDDYDRLRPLFYPDASVLLLCFDVTSPN---SFDNIFNR 110 + QV V+ H++D GQ D R + D + ++ +S N DN NR Sbjct: 194 FETKFQVD--KVNFHMFDVGGQRDERRKWIQCFNDVTAIIFVVASSSYNMVIREDNQTNR 251 Query: 111 WYPEVNHFCK--------KVPIIVVGCKTDLCKDKSLVNKLRRNGLEP----------VT 152 +N F + +I+ K DL +K L K + P T Sbjct: 252 LQEALNLFKSIWNNRWLRTISVILFLNKQDLLAEKVLAGKSKIEDYFPEFARYTTPEDAT 311 Query: 153 YHRGQEMA---------------------RSVGAVAYLECSARLHDNVHAVFQEAAEVAL 191 G++ + A +N+ VF + ++ Sbjct: 312 PEPGEDPRVTRAKYFIRDEFLRISTASGDGRHYCYPHF-TCAVDTENIRRVFNDCRDIIQ 370 Query: 192 SSRGRN 197 R Sbjct: 371 RMHLRQ 376 >1PUJ-A nrPDB Length = 282 Score = 32.9 bits (74), Expect = 0.087, Method: Composition-based stats. Identities = 14/74 (18%), Positives = 29/74 (39%), Gaps = 15/74 (20%) Query: 5 QAAGEEAPPGVRSVKVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMVNLQVKGKP 64 +A G + R+++ +++G GK++L+ A +R + + Sbjct: 112 RAKGVKP----RAIRALIIGIPNVGKSTLINRLAKKN-----IAKTGDRPG--ITTSQQW 160 Query: 65 VH----LHIWDTAG 74 V L + DT G Sbjct: 161 VKVGKELELLDTPG 174 >4FID-A nrPDB Length = 340 Score = 32.9 bits (74), Expect = 0.11, Method: Composition-based stats. Identities = 38/213 (17%), Positives = 60/213 (28%), Gaps = 56/213 (26%) Query: 44 ESYTPTVFE-----RYMVNLQVKGKPVH---LHIWDTAGQDDYDRLRPLFYPDASVLLLC 95 E Y PT + + V H+ D GQ + F+ D + Sbjct: 132 EDYVPTEEDLIHNRTKTTGIHEYDFVVKDIPFHLIDVGGQRSERKKWVSFFSDVDCAIFV 191 Query: 96 -----FDV-------TSPNSFD-NIFNRWYPEVNHFCKKVPIIVVGCKTDLCKDKSLVNK 142 +D+ TS + +F N F K ++ K DL ++K Sbjct: 192 TSLAEYDMKLYEDGNTSRLTESIAVFKDIMT--NEFLKGAVKLIFLNKMDLFEEKLTKVP 249 Query: 143 LR-------------------------RNGLEPVTYHRGQEMARSVGAVAYLE------C 171 L + E + A GAV E Sbjct: 250 LNTIFPEYTGGDNAVMGAQYIQQLFTGKLQTEEMNISGADGTANIEGAVN--EKVYTNPT 307 Query: 172 SARLHDNVHAVFQEAAEVALSSRGRNFWRRITQ 204 +A N+ VF A +V + + N R T+ Sbjct: 308 NATDGSNIKRVFMLAVDVIMKNMAANGKMRPTK 340 Score = 29.1 bits (64), Expect = 1.5, Method: Composition-based stats. Identities = 11/33 (33%), Positives = 16/33 (48%), Gaps = 3/33 (9%) Query: 20 VVLVGDGGCGKTSLLMVFA---DGAFPESYTPT 49 V+L+G G GK+++ G FPE T Sbjct: 8 VMLLGSGESGKSTIAKQLKILFGGGFPEQERAT 40 >1ZCA-A nrPDB Length = 359 Score = 32.9 bits (74), Expect = 0.11, Method: Composition-based stats. Identities = 18/63 (28%), Positives = 29/63 (46%), Gaps = 12/63 (19%) Query: 16 RSVKVVLVGDGGCGKTSLL--MVFADGA-FPE----SYTPTVFERYMVNLQVKGKPVHLH 68 R VK++L+G G GK++ L M G F + + T+F+ +KG V + Sbjct: 34 RLVKILLLGAGESGKSTFLKQMRIIHGREFDQKALLEFRDTIFDN-----ILKGSRVLVD 88 Query: 69 IWD 71 D Sbjct: 89 ARD 91 Score = 27.9 bits (61), Expect = 2.8, Method: Composition-based stats. Identities = 27/192 (14%), Positives = 50/192 (26%), Gaps = 39/192 (20%) Query: 40 GAFPESYTPTVFERYMVNLQVKG---KPVHLHIWDTAGQDDYDRLRPLFYPDASVLLLCF 96 FP + + + K + + D GQ + + + +L Sbjct: 171 NYFPSKQDILLARKATKGIVEHDFVIKKIPFKMVDVGGQRSQRQKWFQCFDGITSILFMV 230 Query: 97 DVT--------SPNS---------FDNIFNRWYPEVNHFCKKVPIIVVGCKTDLCKDK-- 137 + + F+ I N N V II+ K DL +K Sbjct: 231 SSSEYDQVLMEDRRTNRLVESMNIFETIVN------NKLFFNVSIILFLNKMDLLVEKVK 284 Query: 138 --SLVNKLRRNGLEPVTYHRGQEM-------ARSVGAVAYLE--CSARLHDNVHAVFQEA 186 S+ +P Q R + +A +N+ VF Sbjct: 285 SVSIKKHFPDFKGDPHRLEDVQRYLVQCFDRKRRNRSKPLFHHFTTAIDTENIRFVFHAV 344 Query: 187 AEVALSSRGRNF 198 + L ++ Sbjct: 345 KDTILQENLKDI 356 >4V89-AW nrPDB Length = 534 Score = 32.5 bits (73), Expect = 0.12, Method: Composition-based stats. Identities = 12/68 (17%), Positives = 23/68 (33%), Gaps = 4/68 (5%) Query: 65 VHLHIWDTAGQDDYDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVNHFCKKVPI 124 +++ DT G +D+ L+ D ++ + EV + PI Sbjct: 82 CLVNLLDTPGHEDFSEDTYRTLTAVDCCLMVIDAAKGV--EDRTRKLM-EVTRL-RDTPI 137 Query: 125 IVVGCKTD 132 + K D Sbjct: 138 LTFMNKLD 145 >1YE8-A nrPDB Length = 178 Score = 32.5 bits (73), Expect = 0.13, Method: Composition-based stats. Identities = 7/22 (31%), Positives = 15/22 (68%) Query: 18 VKVVLVGDGGCGKTSLLMVFAD 39 +K+++ G+ G GKT+L+ + Sbjct: 1 MKIIITGEPGVGKTTLVKKIVE 22 >6HZK-A nrPDB Length = 333 Score = 32.5 bits (73), Expect = 0.13, Method: Composition-based stats. Identities = 12/35 (34%), Positives = 17/35 (48%), Gaps = 4/35 (11%) Query: 19 KVVLVG---DGGCGKTSLLMVFADGAFPESYTPTV 50 +VVL+G D GCGK++ L A F + Sbjct: 6 RVVLIGVAGDSGCGKSTFLNRLA-DLFGTELMTVI 39 >4KV9-A nrPDB Length = 412 Score = 32.5 bits (73), Expect = 0.13, Method: Composition-based stats. Identities = 14/55 (25%), Positives = 25/55 (45%), Gaps = 3/55 (5%) Query: 18 VKVVLVGDGGCGKTSLLMVFADGAF---PESYTPTVFERYMVNLQVKGKPVHLHI 69 ++ VG+ G GK++LL + F P ++ T + V +K V L + Sbjct: 42 FNILCVGETGIGKSTLLETLFNQKFDFSPSTHDLTDPKLKAVTYDLKEANVKLKL 96 >5M04-A nrPDB Length = 360 Score = 32.5 bits (73), Expect = 0.14, Method: Composition-based stats. Identities = 12/76 (15%), Positives = 23/76 (30%), Gaps = 17/76 (22%) Query: 111 WYPEVNHFCKKV---PIIVVGCKTDLCKDKSLVNKLRRNGLEPVTYHRGQEMARSVG-AV 166 E+ + + + P +V K DL + + +A ++G Sbjct: 282 IISELEKYSQDLATKPRWLVFNKIDLLDKVEA-------------EEKAKAIAEALGWED 328 Query: 167 AYLECSARLHDNVHAV 182 Y SA V + Sbjct: 329 KYYLISAASGLGVKDL 344 >4U00-A nrPDB Length = 244 Score = 32.5 bits (73), Expect = 0.14, Method: Composition-based stats. Identities = 10/48 (20%), Positives = 19/48 (39%), Gaps = 10/48 (20%) Query: 19 KVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMVNLQVKGKPVH 66 K+V++G G GK++L+ + + + V G V Sbjct: 32 KLVIIGPSGSGKSTLIRTINR----------LEDFQEGEVVVDGLSVK 69 >4CSU-9 nrPDB Length = 390 Score = 32.2 bits (72), Expect = 0.17, Method: Composition-based stats. Identities = 12/76 (15%), Positives = 23/76 (30%), Gaps = 17/76 (22%) Query: 111 WYPEVNHFCKKV---PIIVVGCKTDLCKDKSLVNKLRRNGLEPVTYHRGQEMARSVG-AV 166 E+ + + + P +V K DL + + +A ++G Sbjct: 262 IISELEKYSQDLATKPRWLVFNKIDLLDKVEA-------------EEKAKAIAEALGWED 308 Query: 167 AYLECSARLHDNVHAV 182 Y SA V + Sbjct: 309 KYYLISAASGLGVKDL 324 >4KXX-A nrPDB Length = 637 Score = 31.8 bits (71), Expect = 0.20, Method: Composition-based stats. Identities = 19/117 (16%), Positives = 39/117 (33%), Gaps = 20/117 (17%) Query: 102 NSFDNIFNRWYPEVNHFC-KKVPIIVVGCKT---------------DLCKDKSLVNKLRR 145 ++F F R + ++ + I + G DL +S+ Sbjct: 387 STFAAFFTRAFDQIRMAAISESNINLCGSHCGVSIGEDGPSQMALEDLAMFRSVPTSTVF 446 Query: 146 NGLEPVTYHRGQEMARSVGAVAYLECSARLH---DNVHAVFQ-EAAEVALSSRGRNF 198 + V + E+A + + ++ S + N + FQ A+V L S+ Sbjct: 447 YPSDGVATEKAVELAANTKGICFIRTSRPENAIIYNNNEDFQVGQAKVVLKSKDDQV 503 >2QU8-A nrPDB Length = 228 Score = 31.8 bits (71), Expect = 0.20, Method: Composition-based stats. Identities = 32/209 (15%), Positives = 64/209 (30%), Gaps = 25/209 (11%) Query: 10 EAPPGVRSVK--VVLVGDGGCGKTSLLMVFAD-GAFPESYTPTVFERYMVNLQVKGKPVH 66 + P + K ++L G GK+S + + + +SY+ T Y+ + K Sbjct: 20 QGLPSINPHKKTIILSGAPNVGKSSFMNIVSRANVDVQSYSFTTKNLYVGHF--DHKLNK 77 Query: 67 LHIWDTAGQ-----D-----DYDRLRPLFYPDASVLLLCFDVTSPNSFD-NIFNRWYPEV 115 I DT G + + + L + + V+L D++ + + Sbjct: 78 YQIIDTPGLLDRAFENRNTIEMTTITALAHING-VILFIIDISEQCGLTIKEQINLFYSI 136 Query: 116 NHFCKKVPIIVVGCKTDLCKDKSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARL 175 I++ K D C SL + Q + + + S Sbjct: 137 KSVFSNKSIVIGFNKIDKCNMDSLSIDNKLLIK--------QILDNVKNPIKFSSFSTLT 188 Query: 176 HDNVHAVFQEAAEVALSSRGRNFWRRITQ 204 V A E+ + + + Q Sbjct: 189 GVGVEQAKITACELLKNDQAESILLDQEQ 217 >3DEF-A nrPDB Length = 262 Score = 31.4 bits (70), Expect = 0.26, Method: Composition-based stats. Identities = 9/31 (29%), Positives = 17/31 (54%) Query: 8 GEEAPPGVRSVKVVLVGDGGCGKTSLLMVFA 38 G+ + S+ V+++G GG GK+S + Sbjct: 27 GKLKQKDMNSMTVLVLGKGGVGKSSTVNSLI 57 >2YYZ-A nrPDB Length = 359 Score = 31.4 bits (70), Expect = 0.27, Method: Composition-based stats. Identities = 17/45 (37%), Positives = 23/45 (51%), Gaps = 5/45 (11%) Query: 20 VVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMVNLQVKGKP 64 V L+G GCGKT+ L++ A Y PT E Y ++ V P Sbjct: 32 VALLGPSGCGKTTTLLMLAG-----IYKPTSGEIYFDDVLVNDIP 71 >1YR7-A nrPDB Length = 262 Score = 31.4 bits (70), Expect = 0.27, Method: Composition-based stats. Identities = 12/37 (32%), Positives = 19/37 (51%), Gaps = 3/37 (8%) Query: 14 GVRSVKVVLVGDGGCGKTSLL---MVFADGAFPESYT 47 G+ S+ VV VG G GKT+L + + + +Y Sbjct: 11 GMASMIVVFVGTAGSGKTTLTGEFGRYLEDNYKVAYV 47 >3ZJC-A nrPDB Length = 305 Score = 31.4 bits (70), Expect = 0.29, Method: Composition-based stats. Identities = 11/25 (44%), Positives = 16/25 (64%) Query: 8 GEEAPPGVRSVKVVLVGDGGCGKTS 32 G A RS+++VLVG G GK++ Sbjct: 4 GSMAESEDRSLRIVLVGKTGSGKSA 28 >4Z54-A nrPDB Length = 287 Score = 31.0 bits (69), Expect = 0.35, Method: Composition-based stats. Identities = 14/67 (20%), Positives = 25/67 (37%), Gaps = 10/67 (14%) Query: 18 VKVVLVGDGGCGKTSLLMVFADGAFP--------ESYTPTVFERYMV--NLQVKGKPVHL 67 +++VG G GK++L+ E P E + ++ G + L Sbjct: 20 FNIMVVGQSGLGKSTLVNTLFKSQVSRKASSWNREEKIPKTVEIKAIGHVIEEGGVKMKL 79 Query: 68 HIWDTAG 74 + DT G Sbjct: 80 TVIDTPG 86 >4WQY-BZ nrPDB Length = 758 Score = 31.0 bits (69), Expect = 0.37, Method: Composition-based stats. Identities = 14/67 (20%), Positives = 23/67 (34%), Gaps = 4/67 (5%) Query: 66 HLHIWDTAGQDDYDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVNHFCKKVPII 125 ++I DT G D+ ++ FD S + + + + KVP I Sbjct: 145 RINIIDTPGHVDFTIEVERSMRVLDGAIVVFD--SSQGVEPQSETVWRQAEKY--KVPRI 200 Query: 126 VVGCKTD 132 K D Sbjct: 201 AFANKMD 207 >5MKK-A nrPDB Length = 611 Score = 31.0 bits (69), Expect = 0.42, Method: Composition-based stats. Identities = 15/46 (32%), Positives = 20/46 (43%), Gaps = 11/46 (23%) Query: 19 KVVLVGDGGCGKT---SLLMVFADGAFPESYTPTVFERYMVNLQVK 61 KV LVG G GKT SL+ F Y P ++ + V+ Sbjct: 387 KVALVGATGAGKTSVVSLIARF--------YDPQRGCVFLDGVDVR 424 >5IDV-A nrPDB Length = 279 Score = 31.0 bits (69), Expect = 0.43, Method: Composition-based stats. Identities = 12/32 (37%), Positives = 17/32 (53%), Gaps = 2/32 (6%) Query: 20 VVLVGDGGCGKTSLLMVFADGAFPESYTPTVF 51 V LVG G GKTSL+ + F E + ++ Sbjct: 68 VALVGRSGAGKTSLVNMLV--RFQEVSSGQIY 97 >1U0L-A nrPDB Length = 301 Score = 30.6 bits (68), Expect = 0.44, Method: Composition-based stats. Identities = 14/108 (12%), Positives = 33/108 (30%), Gaps = 15/108 (13%) Query: 75 QDDYDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVNHFCKKVPIIVVGCKTDLC 134 + L + ++L V P + I +++ V ++ ++V K DL Sbjct: 71 LHRKNLLTKPHVANVDQVILVVTVKMPETSTYIIDKFL--VLAEKNELETVMVINKMDLY 128 Query: 135 KDKSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNVHAV 182 + L + G ++ SA+ + + Sbjct: 129 DEDDLRKVRELEEIYS-------------GLYPIVKTSAKTGMGIEEL 163 >5C78-A nrPDB Length = 564 Score = 30.6 bits (68), Expect = 0.47, Method: Composition-based stats. Identities = 7/16 (43%), Positives = 13/16 (81%) Query: 19 KVVLVGDGGCGKTSLL 34 K+ +G+ GCGK++L+ Sbjct: 377 KIAFIGESGCGKSTLV 392 >1IQP-A nrPDB Length = 327 Score = 30.6 bits (68), Expect = 0.47, Method: Composition-based stats. Identities = 25/165 (15%), Positives = 54/165 (32%), Gaps = 28/165 (16%) Query: 20 VVLVGDGGCGKTSLLMVFADGAFPESYTPTVFE---RYMVNLQVKGKPVHLHIWDTAGQD 76 ++ G G GKT+ + A F E++ E + V + V Sbjct: 49 LLFAGPPGVGKTTAALALARELFGENWRHNFLELNASDERGINVIREKVK---------- 98 Query: 77 DYDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVNHFCKKVPIIVVGC------- 129 ++ R +P AS ++ D + + + F V I+ Sbjct: 99 EFARTKP--IGGASFKIIFLDEADALT-QDAQQALRRTMEMFSSNVRFILSCNYSSKIIE 155 Query: 130 ----KTDLCKDKSLVNKLRRNGLEPVTYHRGQEMARS-VGAVAYL 169 + + + + L ++ L + + G E+ + A+ Y+ Sbjct: 156 PIQSRCAIFRFRPLRDEDIAKRLRYIAENEGLELTEEGLQAILYI 200 >1R6B-X nrPDB Length = 758 Score = 30.6 bits (68), Expect = 0.49, Method: Composition-based stats. Identities = 12/36 (33%), Positives = 17/36 (47%), Gaps = 5/36 (13%) Query: 21 VLVGDGGCGKTS----LLMVFADGAFPESY-TPTVF 51 +LVG+ G GKT+ L G PE T++ Sbjct: 211 LLVGESGVGKTAIAEGLAWRIVQGDVPEVMADCTIY 246 >6G12-A nrPDB Length = 301 Score = 30.6 bits (68), Expect = 0.50, Method: Composition-based stats. Identities = 12/60 (20%), Positives = 27/60 (45%), Gaps = 3/60 (5%) Query: 15 VRSVKVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMVNLQVKGKPVHLHIWDTAG 74 R+++ ++VG GK++L+ A + ++ + ++V L + DT G Sbjct: 125 PRAIRAMIVGIPNVGKSTLINKLAKRSIAQTGNKPGVTKQQQWIKVGNA---LQLLDTPG 181 >6D00-1 nrPDB Length = 883 Score = 30.6 bits (68), Expect = 0.50, Method: Composition-based stats. Identities = 12/35 (34%), Positives = 15/35 (42%), Gaps = 4/35 (11%) Query: 21 VLVGDGGCGKTS----LLMVFADGAFPESYTPTVF 51 LVG+ G GKT+ L G P S V+ Sbjct: 203 CLVGEPGVGKTAIAEGLANRIVKGDIPSSLQKKVY 237 >3A1W-A nrPDB Length = 168 Score = 30.6 bits (68), Expect = 0.51, Method: Composition-based stats. Identities = 35/189 (18%), Positives = 65/189 (34%), Gaps = 33/189 (17%) Query: 11 APPGVRSVKVVLVGDGGCGKTSLLMVFA-DGAFPESYTPTVFERYMVNLQVKGKPVHLHI 69 P + VKV L G GKTSL + ++ E+ KG ++L Sbjct: 1 GPLHM--VKVALAGCPNVGKTSLFNALTGTKQYVANWPGVTVEKKEGVFTYKGYTINLI- 57 Query: 70 WDTAGQDDYD------RLRPLFY--PDASVLLLCFDVTSPNSFDNIFNRWYPEVNHFCKK 121 D G ++ + DA +++L D +P E+ KK Sbjct: 58 -DLPGTYSLGYSSIDEKIARDYLLKGDADLVILVADSVNPEQ----SLYLLLEILEMEKK 112 Query: 122 VPIIVVGCKTDLCKDKSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNVHA 181 +I+ D + K K+ R E+ + +G + + S+ + + Sbjct: 113 --VILAMTAID--EAKKTGMKIDRY-----------ELQKHLG-IPVVFTSSVTGEGLEE 156 Query: 182 VFQEAAEVA 190 + ++ E A Sbjct: 157 LKEKIVEYA 165 >5X4B-A nrPDB Length = 162 Score = 30.6 bits (68), Expect = 0.52, Method: Composition-based stats. Identities = 17/131 (12%), Positives = 42/131 (32%), Gaps = 12/131 (9%) Query: 20 VVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMVNLQVKGKPVHLHIWDTAG----- 74 V +VG GK+++ A R + + ++ DT G Sbjct: 5 VAIVGRPNVGKSTIFNRIAGERISIVEDTPGVTRDRIYSSAEWLNYDFNLIDTGGIDIGD 64 Query: 75 ---QDDYDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVNHFCKKVPIIVVGCKT 131 + + +A V++ + + ++ + KK P+++ K Sbjct: 65 EPFLAQIRQQAEIAMDEADVIIFM---VNGREGVTAADEEVAKILYRTKK-PVVLAVNKL 120 Query: 132 DLCKDKSLVNK 142 D + ++ + Sbjct: 121 DNTEMRANIYD 131 >6QUZ-B nrPDB Length = 599 Score = 30.2 bits (67), Expect = 0.56, Method: Composition-based stats. Identities = 14/24 (58%), Positives = 15/24 (62%), Gaps = 3/24 (12%) Query: 19 KVVLVGDGGCGKTS---LLMVFAD 39 KV LVG G GKT+ LLM F D Sbjct: 383 KVALVGPTGSGKTTIVNLLMRFYD 406 >2YV5-A nrPDB Length = 302 Score = 30.2 bits (67), Expect = 0.56, Method: Composition-based stats. Identities = 7/19 (36%), Positives = 10/19 (52%) Query: 20 VVLVGDGGCGKTSLLMVFA 38 +L G G GK+S+L Sbjct: 168 CILAGPSGVGKSSILSRLT 186 >6ED3-A nrPDB Length = 848 Score = 30.2 bits (67), Expect = 0.59, Method: Composition-based stats. Identities = 20/70 (28%), Positives = 29/70 (41%), Gaps = 15/70 (21%) Query: 21 VLVGDGGCGKTS----LLMVFADGAFPESY-TPTV----------FERYMVNLQVKGKPV 65 VL+G+ G GKT+ L G PES T+ +Y + + K V Sbjct: 203 VLIGEPGVGKTAIVEGLAQRIVAGDVPESLRDKTIVALDLGSMVAGSKYRGEFEERLKAV 262 Query: 66 HLHIWDTAGQ 75 I ++AGQ Sbjct: 263 LDDIKNSAGQ 272 >3V70-A nrPDB Length = 247 Score = 30.2 bits (67), Expect = 0.61, Method: Composition-based stats. Identities = 15/70 (21%), Positives = 26/70 (37%), Gaps = 3/70 (4%) Query: 6 AAGEEAP--PGVRSVKVVLVGDGGCGKTSLLMV-FADGAFPESYTPTVFERYMVNLQVKG 62 ++G E G + +++LVG G GK++ F T R + Sbjct: 8 SSGRENLYFQGESTRRLILVGRTGAGKSATGNSILGQRRFFSRLGATSVTRACTTGSRRW 67 Query: 63 KPVHLHIWDT 72 H+ + DT Sbjct: 68 DKCHVEVVDT 77 >2WJG-A nrPDB Length = 188 Score = 30.2 bits (67), Expect = 0.62, Method: Composition-based stats. Identities = 19/162 (11%), Positives = 54/162 (33%), Gaps = 21/162 (12%) Query: 11 APPGVRSVKVVLVGDGGCGKTSLLMVFA-DGAFPESYTPTVFERYMVNLQVKGKPVHLHI 69 ++S ++ L+G+ GK+++ + + ++ E+ + G+ + Sbjct: 1 GGSHMKSYEIALIGNPNVGKSTIFNALTGENVYIGNWPGVTVEKKEGEFEYNGE--KFKV 58 Query: 70 WDTAGQDDYDRLRPLFYPD--ASVLL------LCFDVTSPNSFDNIFNRWYPEVNHFCKK 121 D G L + A + L ++ + + ++ Sbjct: 59 VDLPG---VYSLTANSIDEIIARDYIINEKPDLVVNIVDATALERNL-YLTLQLMEMGAN 114 Query: 122 VPIIVVGCKTDLCKDKSLVNKLRR----NGLEPVTYHRGQEM 159 +++ K DL K + + + G++ V ++M Sbjct: 115 --LLLALNKMDLAKSLGIEIDVDKLEKILGVKVVPLSAAKKM 154 >2GA8-A nrPDB Length = 359 Score = 30.2 bits (67), Expect = 0.62, Method: Composition-based stats. Identities = 11/44 (25%), Positives = 19/44 (43%), Gaps = 2/44 (4%) Query: 20 VVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMVNLQVKGK 63 V+LVG G GK+++ E Y T + ++V + Sbjct: 27 VILVGSPGSGKSTIAEELCQ-IINEKY-HTFLSEHPNVIEVNDR 68 >5ZLU-EE nrPDB Length = 497 Score = 30.2 bits (67), Expect = 0.68, Method: Composition-based stats. Identities = 18/91 (19%), Positives = 35/91 (38%), Gaps = 16/91 (17%) Query: 19 KVVLVGDGGCGKTSLLMVF---------ADGAFPE-SYTPTVFERYMVNLQVKGKPVHLH 68 ++ LVGD G GK+SLL V F + ++ + + ++ + L Sbjct: 32 RIGLVGDNGAGKSSLLKVLNGEIVLAEATLQRFGDFAHISQLGGIEIETVEDRAMLSRLG 91 Query: 69 IW----DT--AGQDDYDRLRPLFYPDASVLL 93 + DT G++ ++ F +L Sbjct: 92 VSNVQNDTMSGGEETRAKIAAAFSQQVHGIL 122 Score = 28.7 bits (63), Expect = 2.0, Method: Composition-based stats. Identities = 14/48 (29%), Positives = 20/48 (41%) Query: 19 KVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMVNLQVKGKPVH 66 KV + G G GKTSLL + ++ A + +P Y K Sbjct: 324 KVAITGSNGTGKTSLLKMISERADGLTISPKAEIGYFTQTGYKFNTHK 371 >5B3F-A nrPDB Length = 343 Score = 30.2 bits (67), Expect = 0.68, Method: Composition-based stats. Identities = 7/31 (22%), Positives = 13/31 (41%), Gaps = 1/31 (3%) Query: 20 VVLVGDGGCGKTSLLMVFADGAFPESYTPTV 50 + + GD G GK++ F E ++ Sbjct: 40 IGVAGDSGSGKSTFT-RAISDIFGEELVSSI 69 >5AR1-A nrPDB Length = 303 Score = 30.2 bits (67), Expect = 0.72, Method: Composition-based stats. Identities = 12/69 (17%), Positives = 27/69 (39%), Gaps = 15/69 (21%) Query: 20 VVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMVNLQVK--------------GKPV 65 V++VG G G+++ + ++ + T+ + ++ G + Sbjct: 30 VMIVGQSGSGRSTFINTLCGQQVVDT-STTILLPTDTSTEIDLQLREETVELEDDEGVKI 88 Query: 66 HLHIWDTAG 74 L+I DT G Sbjct: 89 QLNIIDTPG 97 >2PJZ-A nrPDB Length = 263 Score = 29.9 bits (66), Expect = 0.76, Method: Composition-based stats. Identities = 14/61 (22%), Positives = 24/61 (39%), Gaps = 17/61 (27%) Query: 19 KVVLVGDGGCGKTSLLMV------FADGAFPE-----------SYTPTVFERYMVNLQVK 61 KV+++G G GKT+LL ++ F Y+ + E Y + + V Sbjct: 32 KVIILGPNGSGKTTLLRAISGLLPYSGNIFINGMEVRKIRNYIRYSTNLPEAYEIGVTVN 91 Query: 62 G 62 Sbjct: 92 D 92 >4YPN-A nrPDB Length = 293 Score = 29.9 bits (66), Expect = 0.78, Method: Composition-based stats. Identities = 10/14 (71%), Positives = 11/14 (78%) Query: 20 VVLVGDGGCGKTSL 33 +VLVG G GKTSL Sbjct: 146 LVLVGPPGVGKTSL 159 >4YPL-A nrPDB Length = 555 Score = 29.9 bits (66), Expect = 0.78, Method: Composition-based stats. Identities = 10/14 (71%), Positives = 11/14 (78%) Query: 20 VVLVGDGGCGKTSL 33 +VLVG G GKTSL Sbjct: 113 LVLVGPPGVGKTSL 126 >3A1U-A nrPDB Length = 258 Score = 29.9 bits (66), Expect = 0.78, Method: Composition-based stats. Identities = 34/182 (18%), Positives = 63/182 (34%), Gaps = 31/182 (17%) Query: 18 VKVVLVGDGGCGKTSLLMVFA-DGAFPESYTPTVFERYMVNLQVKGKPVHLHIWDTAGQD 76 VKV L G GKTSL + ++ E+ KG ++L D G Sbjct: 6 VKVALAGCPNVGKTSLFNALTGTKQYVANWPGVTVEKKEGVFTYKGYTINLI--DLPGTY 63 Query: 77 DYD------RLRPLFY--PDASVLLLCFDVTSPNSFDNIFNRWYPEVNHFCKKVPIIVVG 128 ++ + DA +++L D +P E+ KK +I+ Sbjct: 64 SLGYSSIDEKIARDYLLKGDADLVILVADSVNPEQ----SLYLLLEILEMEKK--VILAM 117 Query: 129 CKTDLCKDKSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNVHAVFQEAAE 188 D + K K+ R E+ + +G + + S+ + + + ++ E Sbjct: 118 TAID--EAKKTGMKIDRY-----------ELQKHLG-IPVVFTSSVTGEGLEELKEKIVE 163 Query: 189 VA 190 A Sbjct: 164 YA 165 >2IYT-A nrPDB Length = 184 Score = 29.9 bits (66), Expect = 0.78, Method: Composition-based stats. Identities = 15/73 (20%), Positives = 24/73 (32%), Gaps = 6/73 (8%) Query: 19 KVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMVNLQVKGKPVHLHIWDTAGQDDY 78 K VLVG G GK+++ A V + I+ T G+ ++ Sbjct: 4 KAVLVGLPGSGKSTIGRRLAKALGVGLLDTDVAIEQRTGRSI------ADIFATDGEQEF 57 Query: 79 DRLRPLFYPDASV 91 R+ A Sbjct: 58 RRIEEDVVRAALA 70 >4RY2-A nrPDB Length = 730 Score = 29.9 bits (66), Expect = 0.78, Method: Composition-based stats. Identities = 11/47 (23%), Positives = 20/47 (42%), Gaps = 10/47 (21%) Query: 20 VVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMVNLQVKGKPVH 66 V +VG+ G GKT+L + Y+P + + + G + Sbjct: 518 VAIVGESGSGKTTLAKLLM-----NFYSPEKGD-----ILINGHSIK 554 >4Q7L-A nrPDB Length = 256 Score = 29.9 bits (66), Expect = 0.79, Method: Composition-based stats. Identities = 14/24 (58%), Positives = 15/24 (62%), Gaps = 3/24 (12%) Query: 19 KVVLVGDGGCGKTS---LLMVFAD 39 KV LVG G GKT+ LLM F D Sbjct: 33 KVALVGPTGSGKTTIVNLLMRFYD 56 >6HA8-V nrPDB Length = 548 Score = 29.9 bits (66), Expect = 0.79, Method: Composition-based stats. Identities = 9/17 (52%), Positives = 12/17 (70%) Query: 19 KVVLVGDGGCGKTSLLM 35 KV ++G G GKT+LL Sbjct: 325 KVAIIGPNGSGKTTLLN 341 >3B5X-A nrPDB Length = 582 Score = 29.9 bits (66), Expect = 0.82, Method: Composition-based stats. Identities = 8/20 (40%), Positives = 12/20 (60%) Query: 20 VVLVGDGGCGKTSLLMVFAD 39 V LVG G GK+++ +F Sbjct: 372 VALVGRSGSGKSTIANLFTR 391 >3GD7-A nrPDB Length = 390 Score = 29.9 bits (66), Expect = 0.85, Method: Composition-based stats. Identities = 21/108 (19%), Positives = 34/108 (31%), Gaps = 28/108 (25%) Query: 19 KVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMVNLQVKGKPVHLHIWDTAGQDDY 78 +V L+G G GK++LL F T E +Q+ G WD Sbjct: 49 RVGLLGRTGSGKSTLLSAFLR------LLNTEGE-----IQIDGVS-----WD------- 85 Query: 79 DRLRPLFYPDASVLL----LCFDVTSPNSFDNIFNRWYPEVNHFCKKV 122 + + A ++ F T + D E+ +V Sbjct: 86 -SITLEQWRKAFGVIPQKVFIFSGTFRKNLDPNAAHSDQEIWKVADEV 132 >1QVR-A nrPDB Length = 854 Score = 29.9 bits (66), Expect = 0.95, Method: Composition-based stats. Identities = 11/28 (39%), Positives = 14/28 (50%), Gaps = 4/28 (14%) Query: 21 VLVGDGGCGKTS----LLMVFADGAFPE 44 VL+G+ G GKT+ L G PE Sbjct: 195 VLIGEPGVGKTAIVEGLAQRIVKGDVPE 222 >2NQL-A nrPDB Length = 388 Score = 29.5 bits (65), Expect = 1.0, Method: Composition-based stats. Identities = 7/18 (38%), Positives = 11/18 (61%) Query: 67 LHIWDTAGQDDYDRLRPL 84 + +WD AGQ+ +R L Sbjct: 128 IALWDIAGQEAGKSIRDL 145 >6G2G-A nrPDB Length = 310 Score = 29.5 bits (65), Expect = 1.0, Method: Composition-based stats. Identities = 10/29 (34%), Positives = 16/29 (55%) Query: 10 EAPPGVRSVKVVLVGDGGCGKTSLLMVFA 38 + V+ + +VL G GG GK+S+ A Sbjct: 1 MSLSQVKHIILVLSGKGGVGKSSVTTQLA 29 >4AC9-A nrPDB Length = 482 Score = 29.5 bits (65), Expect = 1.0, Method: Composition-based stats. Identities = 11/62 (17%), Positives = 22/62 (35%), Gaps = 7/62 (11%) Query: 121 KVPIIVVGCKTDLCKDKSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNVH 180 +PIIVV K+D + + + H ++ + + SA+ V Sbjct: 125 NIPIIVVITKSDNAGTEEIKRTEMIMKSILQSTH-------NLKNSSIIPISAKTGFGVD 177 Query: 181 AV 182 + Sbjct: 178 EL 179 >5OFO-C nrPDB Length = 871 Score = 29.5 bits (65), Expect = 1.0, Method: Composition-based stats. Identities = 11/28 (39%), Positives = 15/28 (53%), Gaps = 4/28 (14%) Query: 21 VLVGDGGCGKTS----LLMVFADGAFPE 44 VL+G+ G GKT+ L +G PE Sbjct: 207 VLIGEPGVGKTAIVEGLAQRIINGEVPE 234 >5NKM-B nrPDB Length = 317 Score = 29.5 bits (65), Expect = 1.1, Method: Composition-based stats. Identities = 13/50 (26%), Positives = 23/50 (46%), Gaps = 2/50 (4%) Query: 23 VGDGGCGKTSLLMVFADGAFPESYTPTVF--ERYMVNLQVKGKPVHLHIW 70 +G G GK++LL + A + Y VF N Q + + + + I+ Sbjct: 34 IGPQGAGKSTLLSMLAGNNSRQMYREYVFRPVSREANEQSRHQTIQIDIY 83 >4CIU-A nrPDB Length = 727 Score = 29.5 bits (65), Expect = 1.1, Method: Composition-based stats. Identities = 11/28 (39%), Positives = 15/28 (53%), Gaps = 4/28 (14%) Query: 21 VLVGDGGCGKTS----LLMVFADGAFPE 44 VL+G+ G GKT+ L +G PE Sbjct: 61 VLIGEPGVGKTAIVEGLAQRIINGEVPE 88 >6FT6-s nrPDB Length = 520 Score = 29.5 bits (65), Expect = 1.1, Method: Composition-based stats. Identities = 13/56 (23%), Positives = 22/56 (39%), Gaps = 3/56 (5%) Query: 78 YDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVNHFCKKVPIIVVGCKTDL 133 YD++ + V+L D P S +R E + +I++ K DL Sbjct: 165 YDKIFKSVIDASDVILYVLDARDPES---TRSRKVEEAVLQSQGKRLILILNKVDL 217 >3J3U-A nrPDB Length = 810 Score = 29.5 bits (65), Expect = 1.1, Method: Composition-based stats. Identities = 12/45 (26%), Positives = 17/45 (37%), Gaps = 1/45 (2%) Query: 21 VLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMVNLQVKGKPV 65 VL+G+ G GKT++ A P + V G V Sbjct: 205 VLIGEPGVGKTAIAEGLAQQIINNE-VPEILRDKRVMTLDMGTVV 248 >5H7J-A nrPDB Length = 743 Score = 29.5 bits (65), Expect = 1.1, Method: Composition-based stats. Identities = 21/126 (16%), Positives = 37/126 (29%), Gaps = 29/126 (23%) Query: 29 GKTSLLMVFADGA---------------FPESYTP---TV-FERYMVNLQVKGKPVHLHI 69 GKT+L GA F E T+ + +GK +++ Sbjct: 36 GKTTLSDNLLAGAGMISEELAGKQLVLDFDEQEQARGITINAANVSMVHNYEGKDYLINL 95 Query: 70 WDTAGQDDYDRLRPLFYPDASVLLLCFDVTS---PNSFDNIFNRWYPEVNHFCKKVPIIV 126 DT G D+ +++ D P + + V P++ Sbjct: 96 IDTPGHVDFGGDVTRAMRAIDGVIIVVDAVEGVMPQTETVVRQALREYVK------PVLF 149 Query: 127 VGCKTD 132 + K D Sbjct: 150 I-NKVD 154 >4YDS-A nrPDB Length = 228 Score = 29.5 bits (65), Expect = 1.1, Method: Composition-based stats. Identities = 12/53 (22%), Positives = 22/53 (41%), Gaps = 4/53 (7%) Query: 20 VVLVGDGGCGKTSLLMVFADGAFPES---YTPTVFERYMVNLQVKGKPVHLHI 69 +++ GD G GK+ L F G Y T + + +K K + + + Sbjct: 23 IMIEGDHGTGKSVLSAQFVLGFLLSDKKGYVITTEQT-TKDYLIKMKEIKIDL 74 >1JBK-A nrPDB Length = 195 Score = 29.5 bits (65), Expect = 1.2, Method: Composition-based stats. Identities = 11/28 (39%), Positives = 15/28 (53%), Gaps = 4/28 (14%) Query: 21 VLVGDGGCGKTS----LLMVFADGAFPE 44 VL+G+ G GKT+ L +G PE Sbjct: 47 VLIGEPGVGKTAIVEGLAQRIINGEVPE 74 >6EM8-A nrPDB Length = 818 Score = 29.5 bits (65), Expect = 1.2, Method: Composition-based stats. Identities = 10/39 (25%), Positives = 20/39 (51%) Query: 21 VLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMVNLQ 59 VL+G+ G GKT++ A T+ ++ +++L Sbjct: 205 VLIGEPGVGKTAIAEGLAQAIVNNEVPETLKDKRVMSLD 243 >5MRE-WW nrPDB Length = 401 Score = 29.5 bits (65), Expect = 1.2, Method: Composition-based stats. Identities = 8/18 (44%), Positives = 11/18 (61%) Query: 19 KVVLVGDGGCGKTSLLMV 36 K ++ G+ G GKT LL Sbjct: 96 KFIITGEPGVGKTVLLSQ 113 >2IW3-A nrPDB Length = 986 Score = 29.5 bits (65), Expect = 1.2, Method: Composition-based stats. Identities = 10/39 (25%), Positives = 17/39 (43%), Gaps = 5/39 (12%) Query: 19 KVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMVN 57 ++ ++G G GK++L+ V PT E Y Sbjct: 701 RIAVIGPNGAGKSTLINVLTG-----ELLPTSGEVYTHE 734 >5VHD-D nrPDB Length = 870 Score = 29.5 bits (65), Expect = 1.2, Method: Composition-based stats. Identities = 9/24 (37%), Positives = 14/24 (58%) Query: 21 VLVGDGGCGKTSLLMVFADGAFPE 44 V+ G+ GCGKT+ + F + E Sbjct: 80 VISGETGCGKTTQVTQFILDNYIE 103 >4HSE-A nrPDB Length = 397 Score = 29.1 bits (64), Expect = 1.3, Method: Composition-based stats. Identities = 11/28 (39%), Positives = 14/28 (50%), Gaps = 4/28 (14%) Query: 21 VLVGDGGCGKTS----LLMVFADGAFPE 44 VL+G+ G GKT+ L G PE Sbjct: 58 VLIGEPGVGKTAIVEGLAQRIVKGDVPE 85 >6EMW-E nrPDB Length = 181 Score = 29.1 bits (64), Expect = 1.3, Method: Composition-based stats. Identities = 10/39 (25%), Positives = 20/39 (51%) Query: 21 VLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMVNLQ 59 VL+G+ G GKT++ A T+ ++ +++L Sbjct: 44 VLIGEPGVGKTAIAEGLAQAIVNNEVPETLKDKRVMSLD 82 >5OCH-A nrPDB Length = 612 Score = 29.1 bits (64), Expect = 1.3, Method: Composition-based stats. Identities = 19/58 (32%), Positives = 23/58 (39%), Gaps = 19/58 (32%) Query: 12 PPGVRSVKVVLVGDGGCGKT---SLLMVFADGAFPESYTPTVFERYMVNLQVKGKPVH 66 PPG V LVG G GKT SLL F Y PT + + G+ + Sbjct: 389 PPGKI---VALVGQSGGGKTTVASLLERF--------YDPTAG-----VVMLDGRDLR 430 >3D0O-A nrPDB Length = 317 Score = 29.1 bits (64), Expect = 1.3, Method: Composition-based stats. Identities = 11/53 (20%), Positives = 22/53 (41%), Gaps = 10/53 (18%) Query: 19 KVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMVNLQVKGKPVHLHIWD 71 KVVL+G+G G +S + + + +V + + + V + D Sbjct: 8 KVVLIGNGAVG-SSYAFSLVNQSIVDE---------LVIIDLDTEKVRGDVMD 50 >6O81-S nrPDB Length = 472 Score = 29.1 bits (64), Expect = 1.3, Method: Composition-based stats. Identities = 14/91 (15%), Positives = 31/91 (34%), Gaps = 16/91 (17%) Query: 101 PNSFDNIFNRWYPEVNHFCKKVPIIVVGCKTDLCKDKSLVNKLRRNGLEPV-TYHRGQEM 159 P + +++ ++ H I+++ K DL K+ + + T G Sbjct: 168 PQTSEHLAAIEIMKLKH------ILILQNKIDLVKESQAKEQYEQILAFVQGTVAEG--- 218 Query: 160 ARSVGAVAYLECSARLHDNVHAVFQEAAEVA 190 + SA+L N+ V + + Sbjct: 219 ------APIIPISAQLKYNIEVVCEYIVKKI 243 >6FEC-S nrPDB Length = 422 Score = 29.1 bits (64), Expect = 1.3, Method: Composition-based stats. Identities = 14/91 (15%), Positives = 31/91 (34%), Gaps = 16/91 (17%) Query: 101 PNSFDNIFNRWYPEVNHFCKKVPIIVVGCKTDLCKDKSLVNKLRRNGLEPV-TYHRGQEM 159 P + +++ ++ H I+++ K DL K+ + + T G Sbjct: 130 PQTSEHLAAIEIMKLKH------ILILQNKIDLVKESQAKEQYEQILAFVQGTVAEG--- 180 Query: 160 ARSVGAVAYLECSARLHDNVHAVFQEAAEVA 190 + SA+L N+ V + + Sbjct: 181 ------APIIPISAQLKYNIEVVCEYIVKKI 205 >4MKI-B nrPDB Length = 298 Score = 29.1 bits (64), Expect = 1.3, Method: Composition-based stats. Identities = 11/48 (22%), Positives = 21/48 (43%), Gaps = 5/48 (10%) Query: 20 VVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMVNLQVKGKPVHL 67 V ++G G GK++L+ P+ + Y+ + + K V L Sbjct: 40 VGIIGHTGSGKSTLIQQL-----NGLLKPSKGKIYINGIDITDKKVSL 82 >1NI3-A nrPDB Length = 392 Score = 29.1 bits (64), Expect = 1.3, Method: Composition-based stats. Identities = 13/83 (15%), Positives = 26/83 (31%), Gaps = 13/83 (15%) Query: 18 VKVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMVNLQVKGKPVHLHIWDTAGQDD 77 +K +VG GK++ Y + + + + D + Sbjct: 21 LKTGIVGMPNVGKSTFFRAITKSVLGNP------ANYPY-ATIDPEEAKVAVPD----ER 69 Query: 78 YDRLRPLFYPDAS--VLLLCFDV 98 +D L + P + L FD+ Sbjct: 70 FDWLCEAYKPKSRVPAFLTVFDI 92 >1IRQ-A nrPDB Length = 71 Score = 29.1 bits (64), Expect = 1.3, Method: Composition-based stats. Identities = 12/75 (16%), Positives = 27/75 (36%), Gaps = 4/75 (5%) Query: 125 IVVGCKTDLCKDKSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNVHAVFQ 184 ++VG L K+ N + + + + + + + +E A+ NV V Sbjct: 1 MIVGN---LGAQKAKRNDTPISAKKDIMGDKTVRVRADLHHIIKIET-AKNGGNVKEVMD 56 Query: 185 EAAEVALSSRGRNFW 199 +A E + + Sbjct: 57 QALEEYIRKYLPDKL 71 >3PXG-A nrPDB Length = 468 Score = 29.1 bits (64), Expect = 1.3, Method: Composition-based stats. Identities = 11/46 (23%), Positives = 16/46 (34%), Gaps = 1/46 (2%) Query: 21 VLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMVNLQVKGKPVH 66 VL+G+ G GKT++ A P + V G Sbjct: 205 VLIGEPGVGKTAIAEGLAQQIINNE-VPEILRDKRVMTLDMGTKYR 249 >5EE0-A nrPDB Length = 395 Score = 29.1 bits (64), Expect = 1.3, Method: Composition-based stats. Identities = 13/74 (17%), Positives = 28/74 (37%), Gaps = 12/74 (16%) Query: 18 VKVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMVNLQVKGKPVHLHIWDTAGQDD 77 +K+ +VG GK++ + + P P + +++ D + Sbjct: 26 LKIGIVGLPNVGKSTFFNIVTKLSIPAENFP--------FCTIDPNEARVYVPD----ER 73 Query: 78 YDRLRPLFYPDASV 91 +D L L+ P + V Sbjct: 74 FDWLCQLYKPKSEV 87 >1UDX-A nrPDB Length = 416 Score = 29.1 bits (64), Expect = 1.3, Method: Composition-based stats. Identities = 36/205 (17%), Positives = 57/205 (27%), Gaps = 40/205 (19%) Query: 5 QAAGEEAPPGVRSVKVVLVGDGG------CGKTSLLMVFADG--AFPESYTPTVFERYMV 56 AGEE ++++L+ D G GK+SLL T+ V Sbjct: 139 AEAGEEGEKRRLRLELMLIADVGLVGYPNAGKSSLLAAMTRAHPKIAPYPFTTLSPNLGV 198 Query: 57 NLQVKGKPVHLHIWD----TAGQDDYDRLRPLFYPD---ASVLLLCFDVTSPNSFDNIFN 109 + + L D G + L F VLL D Sbjct: 199 VEVSEEERFTLA--DIPGIIEGASEGKGLGLEFLRHIARTRVLLYVLDAADEP--LKTLE 254 Query: 110 RWYPEVNHFCKKV---PIIVVGCKTDLCKDKSLVNKLRRNGLEPVTYHRGQEMARSVGAV 166 EV + + P +V K DL +++++ +AR + Sbjct: 255 TLRKEVGAYDPALLRRPSLVALNKVDLLEEEAVKAL-------------ADALARE--GL 299 Query: 167 AYLECSARLHDN---VHAVFQEAAE 188 A L SA + Sbjct: 300 AVLPVSALTGAGLPALKEALHALVR 324 >3PXI-A nrPDB Length = 758 Score = 29.1 bits (64), Expect = 1.4, Method: Composition-based stats. Identities = 11/46 (23%), Positives = 16/46 (34%), Gaps = 1/46 (2%) Query: 21 VLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMVNLQVKGKPVH 66 VL+G+ G GKT++ A P + V G Sbjct: 205 VLIGEPGVGKTAIAEGLAQQIINNE-VPEILRDKRVMTLDMGTKYR 249 >2OHF-A nrPDB Length = 396 Score = 29.1 bits (64), Expect = 1.4, Method: Composition-based stats. Identities = 18/98 (18%), Positives = 34/98 (34%), Gaps = 20/98 (20%) Query: 8 GEEAPPGV----RSVKVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMVNLQVKGK 63 G + PP + S+K+ +VG GK++ V + P + Sbjct: 9 GIKPPPIIGRFGTSLKIGIVGLPNVGKSTFFNVLTNSQASAENFP--------FCTIDPN 60 Query: 64 PVHLHIWDTAGQDDYDRLRPLFYPDAS---VLLLCFDV 98 + + D + +D L ++ AS L D+ Sbjct: 61 ESRVPVPD----ERFDFL-CQYHKPASKIPAFLNVVDI 93 >3LLM-A nrPDB Length = 235 Score = 29.1 bits (64), Expect = 1.4, Method: Composition-based stats. Identities = 9/26 (34%), Positives = 15/26 (57%) Query: 20 VVLVGDGGCGKTSLLMVFADGAFPES 45 V++ G GCGKT+ + F F ++ Sbjct: 79 VIIRGATGCGKTTQVPQFILDDFIQN 104 >4HZI-A nrPDB Length = 294 Score = 29.1 bits (64), Expect = 1.4, Method: Composition-based stats. Identities = 14/68 (20%), Positives = 30/68 (44%), Gaps = 8/68 (11%) Query: 15 VRSVK----VVLVGDGGCGKTSLLMVFADGAFPESYTPTV--FERYMVNLQVKGKPVHLH 68 +K VL+G G GK++L+ G + + T+ F+ + ++ + Sbjct: 54 SFEIKTNEHCVLLGRNGAGKSTLVN-LIYG-MIWATSGTIRLFQETYGEIAIQDLRKRIG 111 Query: 69 IWDTAGQD 76 I D++ Q+ Sbjct: 112 ILDSSQQE 119 >3PV0-A nrPDB Length = 381 Score = 29.1 bits (64), Expect = 1.4, Method: Composition-based stats. Identities = 10/15 (66%), Positives = 12/15 (80%) Query: 20 VVLVGDGGCGKTSLL 34 VV VG GCGK++LL Sbjct: 32 VVFVGPSGCGKSTLL 46 >5H7K-A nrPDB Length = 397 Score = 29.1 bits (64), Expect = 1.5, Method: Composition-based stats. Identities = 12/75 (16%), Positives = 25/75 (33%), Gaps = 10/75 (13%) Query: 61 KGKPVHLHIWDTAGQDDYDRLRPLFYPDASVLLLCFDVTS---PNSFDNIFNRWYPEVNH 117 +GK +++ DT G D+ +++ D P + + V Sbjct: 87 EGKDYLINLIDTPGHVDFGGDVTRAMRAIDGVIIVVDAVEGVMPQTETVVRQALREYVK- 145 Query: 118 FCKKVPIIVVGCKTD 132 P++ + K D Sbjct: 146 -----PVLFI-NKVD 154 >2RGK-A nrPDB Length = 421 Score = 29.1 bits (64), Expect = 1.5, Method: Composition-based stats. Identities = 10/56 (17%), Positives = 15/56 (26%), Gaps = 10/56 (17%) Query: 67 LHIWDTA--GQDDYDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVNHFCK 120 L WD A ++Y L+ +DVT +W Sbjct: 155 LESWDEAFSKTEEYRG-GNANMHAVEAFLIVYDVTH-------DKKWLDRAIRVAS 202 >2P8Y-T nrPDB Length = 842 Score = 29.1 bits (64), Expect = 1.5, Method: Composition-based stats. Identities = 13/106 (12%), Positives = 31/106 (29%), Gaps = 12/106 (11%) Query: 51 FERYMVNLQVKGKPVHLHIWDTAGQDDYDRLRPLFYPDASVLLLCFDVTSP---NSFDNI 107 + + + G +++ D+ G D+ L+ D + + Sbjct: 84 EDVKEIKQKTDGNSFLINLIDSPGHVDFSSEVTAALRVTDGALVVVDTIEGVCVQTETVL 143 Query: 108 FNRWYPEVNHFCKKVPIIVVGCKTD--LCKDKSLVNKLRRNGLEPV 151 + P++V+ K D L + + L + V Sbjct: 144 RQALGERIK------PVVVI-NKVDRALLELQVSKEDLYQTFARTV 182 >1ZE1-A nrPDB Length = 309 Score = 29.1 bits (64), Expect = 1.5, Method: Composition-based stats. Identities = 12/64 (18%), Positives = 23/64 (35%), Gaps = 3/64 (4%) Query: 110 RWYPEVNHFCKKVPIIVVGCKTDLCKDKSLVNKLRRNGLEPVTYHRGQ--EMARSVGAVA 167 W P V + +I+ G + L K + + V G+ +A + + Sbjct: 227 EWLPRVVVHQESTKMILNGSQIHLEMLKEWDGFKKGEVVR-VFNEEGRLLALAEAERNSS 285 Query: 168 YLEC 171 +LE Sbjct: 286 FLET 289 >3VX4-A nrPDB Length = 273 Score = 29.1 bits (64), Expect = 1.5, Method: Composition-based stats. Identities = 10/17 (58%), Positives = 11/17 (64%) Query: 19 KVVLVGDGGCGKTSLLM 35 KV LVG G GKT+L Sbjct: 63 KVSLVGASGSGKTTLAK 79 >3LXX-A nrPDB Length = 239 Score = 29.1 bits (64), Expect = 1.5, Method: Composition-based stats. Identities = 9/26 (34%), Positives = 16/26 (61%), Gaps = 1/26 (3%) Query: 7 AGEEAPPGVRSVKVVLVGDGGCGKTS 32 G + P + +++VLVG G GK++ Sbjct: 20 PGRQEPRNSQ-LRIVLVGKTGAGKSA 44 >3FVQ-A nrPDB Length = 359 Score = 29.1 bits (64), Expect = 1.5, Method: Composition-based stats. Identities = 9/19 (47%), Positives = 13/19 (68%) Query: 20 VVLVGDGGCGKTSLLMVFA 38 + ++G GCGKT+LL A Sbjct: 33 LFIIGASGCGKTTLLRCLA 51 >1H65-A nrPDB Length = 270 Score = 29.1 bits (64), Expect = 1.5, Method: Composition-based stats. Identities = 15/68 (22%), Positives = 24/68 (35%) Query: 8 GEEAPPGVRSVKVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMVNLQVKGKPVHL 67 G V S+ ++++G GG GK+S + V + L Sbjct: 30 GNLKQEDVNSLTILVMGKGGVGKSSTVNSIIGERVVSISPFQSEGPRPVMVSRSRAGFTL 89 Query: 68 HIWDTAGQ 75 +I DT G Sbjct: 90 NIIDTPGL 97 >6H7G-A nrPDB Length = 346 Score = 29.1 bits (64), Expect = 1.5, Method: Composition-based stats. Identities = 8/29 (27%), Positives = 14/29 (48%), Gaps = 3/29 (10%) Query: 14 GVRSVKVVLVG---DGGCGKTSLLMVFAD 39 + K V++G D GCGK++ + Sbjct: 1 HMDKDKTVVIGLAADSGCGKSTFMRRMTS 29 >6I3O-A nrPDB Length = 677 Score = 29.1 bits (64), Expect = 1.6, Method: Composition-based stats. Identities = 6/19 (31%), Positives = 13/19 (68%) Query: 20 VVLVGDGGCGKTSLLMVFA 38 +++VG+ G GKT+ + + Sbjct: 31 LIVVGETGSGKTTQVTQYL 49 >5D4W-A nrPDB Length = 926 Score = 29.1 bits (64), Expect = 1.6, Method: Composition-based stats. Identities = 7/14 (50%), Positives = 12/14 (85%) Query: 21 VLVGDGGCGKTSLL 34 VL+G+ G GKT+++ Sbjct: 220 VLIGEPGVGKTTIV 233 >4MYH-A nrPDB Length = 598 Score = 29.1 bits (64), Expect = 1.6, Method: Composition-based stats. Identities = 11/51 (21%), Positives = 19/51 (37%), Gaps = 16/51 (31%) Query: 19 KVVLVGDGGCGKTS---LLMVFADGAFPESYTPTVFERYMVNLQVKGKPVH 66 K +VG G GK++ L+ F Y P + + G+ + Sbjct: 367 KTAIVGSSGSGKSTILKLVFRF--------YDPESG-----RILINGRDIK 404 >2GZA-A nrPDB Length = 361 Score = 29.1 bits (64), Expect = 1.6, Method: Composition-based stats. Identities = 13/49 (26%), Positives = 22/49 (44%), Gaps = 2/49 (4%) Query: 20 VVLVGDGGCGKTSLLMVFADG-AFPESYTPTVFERYMVNLQVKGKPVHL 67 +V+ G+ G GKT+L+ F + T+ + + L VHL Sbjct: 178 IVVAGETGSGKTTLMKALMQEIPFDQRLI-TIEDVPELFLPDHPNHVHL 225 >1WXQ-A nrPDB Length = 397 Score = 29.1 bits (64), Expect = 1.6, Method: Composition-based stats. Identities = 14/75 (18%), Positives = 28/75 (37%), Gaps = 13/75 (17%) Query: 108 FNRW-YPEVNHFCKKV-----PIIVVGCKTDLCKD---KSLVNKLRRNGLEPVTYHRGQE 158 +W ++ F ++ P+++ K D D K LV + + G + E Sbjct: 195 PTKWSQDDLLAFASEIRRVNKPMVIAANKADAASDEQIKRLVREEEKRGYIVIPTSAAAE 254 Query: 159 M----ARSVGAVAYL 169 + A G + Y+ Sbjct: 255 LTLRKAAKAGFIEYI 269 >5GM6-Y nrPDB Length = 876 Score = 28.7 bits (63), Expect = 1.7, Method: Composition-based stats. Identities = 8/36 (22%), Positives = 20/36 (55%), Gaps = 5/36 (13%) Query: 15 VRSVK----VVLVGDGGCGKTSLLMVF-ADGAFPES 45 ++ +K ++++G+ G GKT+ L + + F + Sbjct: 233 LQEIKKNQVLIIMGETGSGKTTQLPQYLVEDGFTDQ 268 >2OUK-A nrPDB Length = 263 Score = 28.7 bits (63), Expect = 1.7, Method: Composition-based stats. Identities = 7/18 (38%), Positives = 11/18 (61%) Query: 20 VVLVGDGGCGKTSLLMVF 37 VV++G G GK++ L Sbjct: 53 VVVIGPSGSGKSTFLRCL 70 >4XGC-D nrPDB Length = 459 Score = 28.7 bits (63), Expect = 1.7, Method: Composition-based stats. Identities = 8/26 (30%), Positives = 13/26 (50%) Query: 20 VVLVGDGGCGKTSLLMVFADGAFPES 45 ++L+G G GKT+L+ P Sbjct: 52 LLLLGPRGSGKTTLINSVLADLLPNK 77 >1IM2-A nrPDB Length = 444 Score = 28.7 bits (63), Expect = 1.8, Method: Composition-based stats. Identities = 12/52 (23%), Positives = 19/52 (36%), Gaps = 2/52 (3%) Query: 20 VVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMVNLQVKGKPVHLHIWD 71 ++++G G GKT + A + V + GK V I D Sbjct: 53 ILMIGPTGVGKTEIARRLAK--LANAPFIKVEATKFTEVGYVGKEVDSIIRD 102 >1E94-E nrPDB Length = 449 Score = 28.7 bits (63), Expect = 1.8, Method: Composition-based stats. Identities = 12/52 (23%), Positives = 19/52 (36%), Gaps = 2/52 (3%) Query: 20 VVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMVNLQVKGKPVHLHIWD 71 ++++G G GKT + A + V + GK V I D Sbjct: 59 ILMIGPTGVGKTEIARRLAK--LANAPFIKVEATKFTEVGYVGKEVDSIIRD 108 >1M0T-A nrPDB Length = 491 Score = 28.7 bits (63), Expect = 1.8, Method: Composition-based stats. Identities = 17/86 (19%), Positives = 28/86 (32%), Gaps = 12/86 (13%) Query: 41 AFPESYTPTVFERYMVNLQVKGKPVHLHIWDTAGQDDYDRLRPLFYPDASVLLLCFDVTS 100 F F+ L + K L I DT Q+ + ++Y + T Sbjct: 244 KFGTKSVRLTFDDVNDKLFIDDKTGKLFIRDT-EQE----IAVVYYRTG------YTTTD 292 Query: 101 PNSFDNIFNRWYPEVNHFCKKVPIIV 126 S + R + E F K P ++ Sbjct: 293 YTSEKDWEARLFLE-KSFAIKAPDLL 317 >1OFI-A nrPDB Length = 310 Score = 28.7 bits (63), Expect = 1.9, Method: Composition-based stats. Identities = 12/52 (23%), Positives = 19/52 (36%), Gaps = 2/52 (3%) Query: 20 VVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMVNLQVKGKPVHLHIWD 71 ++++G G GKT + A + V + GK V I D Sbjct: 53 ILMIGPTGVGKTEIARRLAK--LANAPFIKVEATKFTEVGYVGKEVDSIIRD 102 >6BZR-B nrPDB Length = 251 Score = 28.7 bits (63), Expect = 1.9, Method: Composition-based stats. Identities = 9/16 (56%), Positives = 11/16 (68%) Query: 19 KVVLVGDGGCGKTSLL 34 KV +VG G GK+SL Sbjct: 42 KVGIVGRTGAGKSSLA 57 >4MRS-A nrPDB Length = 614 Score = 28.7 bits (63), Expect = 2.0, Method: Composition-based stats. Identities = 10/24 (41%), Positives = 14/24 (58%), Gaps = 3/24 (12%) Query: 19 KVVLVGDGGCGKTS---LLMVFAD 39 +V +VG G GK++ LL F D Sbjct: 389 RVAIVGPSGAGKSTIARLLFRFYD 412 >5LKM-A nrPDB Length = 452 Score = 28.7 bits (63), Expect = 2.0, Method: Composition-based stats. Identities = 23/151 (15%), Positives = 48/151 (31%), Gaps = 31/151 (20%) Query: 20 VVLVG-DGGCGKTSLLMVFADGAFPESYTPTVFERYMVNLQVKGKPVHLHIWDTAGQDDY 78 +VL+G D G GK++LL+ + V V+ + + + L + Sbjct: 90 LVLIGGDPGIGKSTLLLQ------VSTQLSQVGTVLYVSGEESAQQIKLR------AERL 137 Query: 79 DRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVNHFCKKVPIIVVGCKTDLCKDKS 138 + FY + T+ S R P+ I+ + Sbjct: 138 GDIDSEFY--------LYAETNMQSVRAEVERIQPDFLIIDSIQTIM---------SPEI 180 Query: 139 LVNKLRRNGLEPVTYHRGQEMARSVGAVAYL 169 + + + VT Q +A++ ++ Sbjct: 181 SGVQGSVSQVREVTAELMQ-LAKTNNIAIFI 210 >5L22-B nrPDB Length = 572 Score = 28.7 bits (63), Expect = 2.0, Method: Composition-based stats. Identities = 7/15 (46%), Positives = 11/15 (73%) Query: 20 VVLVGDGGCGKTSLL 34 V ++G G GK+SL+ Sbjct: 362 VAIIGPSGSGKSSLV 376 >1KAG-A nrPDB Length = 173 Score = 28.7 bits (63), Expect = 2.0, Method: Composition-based stats. Identities = 12/60 (20%), Positives = 21/60 (35%), Gaps = 6/60 (10%) Query: 20 VVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMVNLQVKGKPVHLHIWDTAGQDDYD 79 + LVG G GK+++ A E Y V ++D G++ + Sbjct: 7 IFLVGPMGAGKSTIGRQLAQQLNMEFYDSDQEIEKRTGADVG------WVFDLEGEEGFR 60 >2WJI-A nrPDB Length = 165 Score = 28.7 bits (63), Expect = 2.1, Method: Composition-based stats. Identities = 19/158 (12%), Positives = 54/158 (34%), Gaps = 21/158 (13%) Query: 15 VRSVKVVLVGDGGCGKTSLLMVFA-DGAFPESYTPTVFERYMVNLQVKGKPVHLHIWDTA 73 ++S ++ L+G+ GK+++ + + ++ E+ + G+ + D Sbjct: 1 MKSYEIALIGNPNVGKSTIFNALTGENVYIGNWPGVTVEKKEGEFEYNGE--KFKVVDLP 58 Query: 74 GQDDYDRLRPLFYPD--ASVLL------LCFDVTSPNSFDNIFNRWYPEVNHFCKKVPII 125 G L + A + L ++ + + ++ ++ Sbjct: 59 G---VYSLTANSIDEIIARDYIINEKPDLVVNIVDATALERNL-YLTLQLMEMGAN--LL 112 Query: 126 VVGCKTDLCKDKSLVNKLRR----NGLEPVTYHRGQEM 159 + K DL K + + + G++ V ++M Sbjct: 113 LALNKMDLAKSLGIEIDVDKLEKILGVKVVPLSAAKKM 150 >1IHU-A nrPDB Length = 589 Score = 28.7 bits (63), Expect = 2.1, Method: Composition-based stats. Identities = 13/54 (24%), Positives = 27/54 (50%), Gaps = 5/54 (9%) Query: 20 VVLVGDGGCGKTSL----LMVFADGAFPESYTPTVFERYMVNLQVKGKPVHLHI 69 ++L+G GG GKT++ + AD F + + T +++ + G +L + Sbjct: 330 IMLMGKGGVGKTTMAAAIAVRLADMGF-DVHLTTSDPAAHLSMTLNGSLNNLQV 382 >5LF0-A nrPDB Length = 234 Score = 28.7 bits (63), Expect = 2.1, Method: Composition-based stats. Identities = 15/69 (21%), Positives = 23/69 (33%), Gaps = 9/69 (13%) Query: 29 GKTSLLMVFADGAFPESYTP----TVFERYMVNLQVKGKPVHLHIWDTAGQDDYDRLRPL 84 GKT L + + E T+ E + + V I + AG + RL P Sbjct: 170 GKTFLEKRYNEDLELEDAIHTAILTLKESFEGQMTEDNIEV--GICNEAG---FRRLTPT 224 Query: 85 FYPDASVLL 93 D + Sbjct: 225 EVKDYLAAI 233 >4G1U-C nrPDB Length = 266 Score = 28.7 bits (63), Expect = 2.1, Method: Composition-based stats. Identities = 9/27 (33%), Positives = 14/27 (51%), Gaps = 1/27 (3%) Query: 20 VVLVGDGGCGKTSLLMVFADGAFPESY 46 V ++G G GK++LL G S+ Sbjct: 40 VAIIGPNGAGKSTLL-RLLTGYLSPSH 65 >4N1A-A nrPDB Length = 589 Score = 28.3 bits (62), Expect = 2.2, Method: Composition-based stats. Identities = 14/43 (32%), Positives = 20/43 (46%), Gaps = 5/43 (11%) Query: 20 VVLVGDGGCGKTSLLMVFADGAFPESYTPT----VFERYMVNL 58 ++ GD CGK++LL E YTP +F Y +L Sbjct: 386 FLVFGDTECGKSNLL-RLITAGIIERYTPQQARLIFIDYSRSL 427 >6MFU-A nrPDB Length = 225 Score = 28.3 bits (62), Expect = 2.3, Method: Composition-based stats. Identities = 13/51 (25%), Positives = 21/51 (41%), Gaps = 5/51 (9%) Query: 20 VVLVGDGGCGKTSLLMVFAD---GAFPESYTPTVFERYMVNLQVKGKPVHL 67 +V+ G G GK++LL + F S + T R + G+ H Sbjct: 22 LVICGPSGTGKSTLLKTLFESQPNTFGFSVSHTT--RKPRPGEENGREYHF 70 >5NIK-J nrPDB Length = 654 Score = 28.3 bits (62), Expect = 2.4, Method: Composition-based stats. Identities = 7/18 (38%), Positives = 12/18 (66%) Query: 20 VVLVGDGGCGKTSLLMVF 37 V +VG G GK++L+ + Sbjct: 37 VAIVGASGSGKSTLMNIL 54 >4DBL-C nrPDB Length = 249 Score = 28.3 bits (62), Expect = 2.4, Method: Composition-based stats. Identities = 8/17 (47%), Positives = 11/17 (64%) Query: 20 VVLVGDGGCGKTSLLMV 36 + LVG G GK++LL Sbjct: 29 LHLVGPNGAGKSTLLAR 45 >2VP0-A nrPDB Length = 250 Score = 28.3 bits (62), Expect = 2.4, Method: Composition-based stats. Identities = 12/40 (30%), Positives = 19/40 (47%), Gaps = 3/40 (7%) Query: 1 MTAAQA---AGEEAPPGVRSVKVVLVGDGGCGKTSLLMVF 37 M A + G + G + V++ G+ G GKT+ L F Sbjct: 1 MAEAASCARKGTKYAEGTQPFTVLIEGNIGSGKTTYLNHF 40 >5LJA-A nrPDB Length = 231 Score = 28.3 bits (62), Expect = 2.4, Method: Composition-based stats. Identities = 7/18 (38%), Positives = 12/18 (66%) Query: 20 VVLVGDGGCGKTSLLMVF 37 V +VG G GK++L+ + Sbjct: 37 VAIVGASGSGKSTLMNIL 54 >4TLD-A nrPDB Length = 253 Score = 28.3 bits (62), Expect = 2.4, Method: Composition-based stats. Identities = 15/53 (28%), Positives = 19/53 (35%) Query: 21 VLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMVNLQVKGKPVHLHIWDTA 73 ++ G G GKT + F E P VF + Q K WD A Sbjct: 43 LVSGTSGTGKTLFSIQFLYNGIIEFDEPGVFVTFEETPQDIIKNARSFGWDLA 95 >2ZBL-A nrPDB Length = 421 Score = 28.3 bits (62), Expect = 2.5, Method: Composition-based stats. Identities = 12/56 (21%), Positives = 16/56 (28%), Gaps = 10/56 (17%) Query: 67 LHIWDTA-GQ-DDYDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVNHFCK 120 L WD A Q +DY L+ +DVT +W Sbjct: 155 LESWDEAFSQTEDYRG-GNANMHAVEAFLIVYDVTH-------DKKWLDRALRIAS 202 >2PCL-A nrPDB Length = 224 Score = 28.3 bits (62), Expect = 2.5, Method: Composition-based stats. Identities = 11/42 (26%), Positives = 20/42 (47%), Gaps = 5/42 (11%) Query: 20 VVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMVNLQVK 61 V ++G G GK++LL + G PT + ++ +V Sbjct: 33 VSIIGASGSGKSTLL--YILGLLDA---PTEGKVFLEGKEVD 69 >2P65-A nrPDB Length = 187 Score = 28.3 bits (62), Expect = 2.5, Method: Composition-based stats. Identities = 7/14 (50%), Positives = 12/14 (85%) Query: 21 VLVGDGGCGKTSLL 34 +L+GD G GKT+++ Sbjct: 47 ILLGDPGVGKTAIV 60 >5A9Z-CA nrPDB Length = 593 Score = 28.3 bits (62), Expect = 2.7, Method: Composition-based stats. Identities = 15/84 (17%), Positives = 25/84 (29%), Gaps = 15/84 (17%) Query: 29 GKTSLLMVFAD--GAFPESYTP--------TVFERYMVNLQVKG-----KPVHLHIWDTA 73 GKT+L+ G F + + + + K ++I DT Sbjct: 17 GKTTLVDKLLQQSGTFDSRAETQERVMDSNDLEKERGITILAKNTAAIKWDYRINIVDTP 76 Query: 74 GQDDYDRLRPLFYPDASVLLLCFD 97 G D+ +LL D Sbjct: 77 GHADFGGEVERVMSMVDSVLLVVD 100 >3S1A-A nrPDB Length = 525 Score = 28.3 bits (62), Expect = 2.7, Method: Composition-based stats. Identities = 15/53 (28%), Positives = 19/53 (35%) Query: 21 VLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMVNLQVKGKPVHLHIWDTA 73 ++ G G GKT + F E P VF + Q K WD A Sbjct: 43 LVSGTSGTGKTLFSIQFLYNGIIEFDEPGVFVTFEETPQDIIKNARSFGWDLA 95 >6FA9-A nrPDB Length = 655 Score = 28.3 bits (62), Expect = 2.7, Method: Composition-based stats. Identities = 7/20 (35%), Positives = 13/20 (65%) Query: 20 VVLVGDGGCGKTSLLMVFAD 39 ++LVG+ G GKT+ + + Sbjct: 50 LILVGETGSGKTTQIPQYLH 69 >4Z8X-A nrPDB Length = 497 Score = 27.9 bits (61), Expect = 2.9, Method: Composition-based stats. Identities = 17/66 (25%), Positives = 27/66 (40%), Gaps = 6/66 (9%) Query: 8 GEEAPPGVRSVKVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMVNLQVKGKPVHL 67 G P G V+L G+ G GKT L A A + + + + + V V Sbjct: 47 GGRPPKG-----VLLYGEPGVGKTLLAKAIAGEAHVPFISVSGSDFVEMFVGVGAARVR- 100 Query: 68 HIWDTA 73 +++TA Sbjct: 101 DLFETA 106 >5GKO-A nrPDB Length = 671 Score = 27.9 bits (61), Expect = 2.9, Method: Composition-based stats. Identities = 7/18 (38%), Positives = 12/18 (66%) Query: 20 VVLVGDGGCGKTSLLMVF 37 V +VG G GK++L+ + Sbjct: 46 VAIVGQSGSGKSTLMNIL 63 >5OWV-A nrPDB Length = 732 Score = 27.9 bits (61), Expect = 3.0, Method: Composition-based stats. Identities = 12/57 (21%), Positives = 20/57 (35%), Gaps = 4/57 (7%) Query: 17 SVKVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMVNLQVKGK--PVHLHIWD 71 + + G GK+SLL F + E + + GK ++ WD Sbjct: 162 EFNIAITGVMNAGKSSLLNALLKEDFLG--VSNIPETANLTVLSYGKSEEAKIYFWD 216 >2XTP-A nrPDB Length = 260 Score = 27.9 bits (61), Expect = 3.1, Method: Composition-based stats. Identities = 9/29 (31%), Positives = 16/29 (55%), Gaps = 2/29 (6%) Query: 4 AQAAGEEAPPGVRSVKVVLVGDGGCGKTS 32 A G+ A ++++LVG G GK++ Sbjct: 11 PHAKGQCASRS--ELRIILVGKTGTGKSA 37 >2BDT-A nrPDB Length = 189 Score = 27.9 bits (61), Expect = 3.1, Method: Composition-based stats. Identities = 9/45 (20%), Positives = 19/45 (42%), Gaps = 4/45 (8%) Query: 19 KVVLV-GDGGCGKTSLLMVFADGAFPESYTPTVFERYMVNLQVKG 62 K+ ++ G G GK++ A +Y + + ++ V G Sbjct: 3 KLYIITGPAGVGKSTTCKRLAAQLDNSAY---IEGDIINHMVVGG 44 >1ZVD-A nrPDB Length = 380 Score = 27.9 bits (61), Expect = 3.1, Method: Composition-based stats. Identities = 5/23 (21%), Positives = 13/23 (56%) Query: 180 HAVFQEAAEVALSSRGRNFWRRI 202 +F+E+ + R ++ W+R+ Sbjct: 32 EEIFEESYRQVMKMRPKDLWKRL 54 >5B57-C nrPDB Length = 273 Score = 27.9 bits (61), Expect = 3.3, Method: Composition-based stats. Identities = 9/18 (50%), Positives = 12/18 (66%) Query: 21 VLVGDGGCGKTSLLMVFA 38 L+G G GK++LL FA Sbjct: 31 ALLGRNGAGKSTLLKTFA 48 >3MKR-B nrPDB Length = 320 Score = 27.9 bits (61), Expect = 3.3, Method: Composition-based stats. Identities = 11/69 (15%), Positives = 30/69 (43%), Gaps = 4/69 (5%) Query: 94 LCFDVTSPNSFDNIFNRWYPEVNHFCKKVPIIVVGCKTDLCKDKSLVNKLRRNGLEPVTY 153 LC+ +T+ F+ ++ + VP++VV K ++ + + L+ R + Sbjct: 108 LCYQLTTVGKFEEAVEKFRSILL----SVPLLVVDNKQEIAEAQQLITICREYIVGLSME 163 Query: 154 HRGQEMARS 162 +++ + Sbjct: 164 TERKKLPKE 172 >3EPJ-A nrPDB Length = 409 Score = 27.9 bits (61), Expect = 3.4, Method: Composition-based stats. Identities = 10/38 (26%), Positives = 16/38 (42%), Gaps = 1/38 (2%) Query: 19 KVVLV-GDGGCGKTSLLMVFADGAFPESYTPTVFERYM 55 KV+++ G G GK+ L + A E + Y Sbjct: 3 KVIVIAGTTGVGKSQLSIQLAQKFNGEVINSDSMQVYK 40 >2IT1-A nrPDB Length = 362 Score = 27.9 bits (61), Expect = 3.4, Method: Composition-based stats. Identities = 12/35 (34%), Positives = 17/35 (48%), Gaps = 5/35 (14%) Query: 20 VVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERY 54 + L+G G GK++LL A Y PT + Y Sbjct: 32 MALLGPSGSGKSTLLYTIAG-----IYKPTSGKIY 61 >1IY1-A nrPDB Length = 254 Score = 27.9 bits (61), Expect = 3.4, Method: Composition-based stats. Identities = 16/54 (29%), Positives = 24/54 (44%), Gaps = 1/54 (1%) Query: 20 VVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMVNLQVKGKPVHLHIWDTA 73 V+LVG G GKT L A A T + + + + V V +++TA Sbjct: 52 VLLVGPPGVGKTHLARAVAGEARVPFITASGSDFVEMFVGVGAARVR-DLFETA 104 >5ZME-A nrPDB Length = 687 Score = 27.9 bits (61), Expect = 3.5, Method: Composition-based stats. Identities = 20/78 (25%), Positives = 28/78 (35%), Gaps = 10/78 (12%) Query: 9 EEAPPGVRSVKVVLVGDGGCGKTSLLMVFADGAFPESYTPTVF--------ERYMVNLQV 60 EE G + +++ G GG GKTSL A +T V + Sbjct: 4 EELAAGQQRKYIMISGKGGVGKTSLSASLAVKLAAAGHTTLVVSTDPAHSLSDSLAQDVS 63 Query: 61 KGKPVHLHIWD--TAGQD 76 G+PV L D G + Sbjct: 64 GGRPVLLQGTDLPLWGLE 81 >5TV4-A nrPDB Length = 605 Score = 27.9 bits (61), Expect = 3.6, Method: Composition-based stats. Identities = 11/23 (47%), Positives = 13/23 (56%), Gaps = 3/23 (13%) Query: 20 VVLVGDGGCGKT---SLLMVFAD 39 V LVG G GK+ SL+ F D Sbjct: 395 VALVGRSGSGKSTIASLITRFYD 417 >2DHR-A nrPDB Length = 499 Score = 27.9 bits (61), Expect = 3.6, Method: Composition-based stats. Identities = 16/54 (29%), Positives = 24/54 (44%), Gaps = 1/54 (1%) Query: 20 VVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMVNLQVKGKPVHLHIWDTA 73 V+LVG G GKT L A A T + + + + V V +++TA Sbjct: 67 VLLVGPPGVGKTHLARAVAGEARVPFITASGSDFVEMFVGVGAARVR-DLFETA 119 >1Z6G-A nrPDB Length = 218 Score = 27.9 bits (61), Expect = 3.6, Method: Composition-based stats. Identities = 8/27 (29%), Positives = 13/27 (48%), Gaps = 1/27 (3%) Query: 20 VVLVGDGGCGKTSLLMVFADGAFPESY 46 +V+ G G GK +L+ FP + Sbjct: 26 LVICGPSGVGKGTLIKKLL-NEFPNYF 51 >1EZ4-A nrPDB Length = 318 Score = 27.9 bits (61), Expect = 3.6, Method: Composition-based stats. Identities = 12/29 (41%), Positives = 14/29 (48%), Gaps = 1/29 (3%) Query: 19 KVVLVGDGGCGKTSLLMVFADGAFPESYT 47 KVVLVGDG G +S A E + Sbjct: 7 KVVLVGDGAVG-SSYAFAMAQQGIAEEFV 34 >5JSZ-B nrPDB Length = 287 Score = 27.5 bits (60), Expect = 3.7, Method: Composition-based stats. Identities = 8/18 (44%), Positives = 12/18 (66%) Query: 20 VVLVGDGGCGKTSLLMVF 37 + LVG G GK++L+ F Sbjct: 36 IALVGHTGSGKSTLMQHF 53 >6QUZ-A nrPDB Length = 587 Score = 27.5 bits (60), Expect = 3.7, Method: Composition-based stats. Identities = 6/16 (37%), Positives = 12/16 (75%) Query: 20 VVLVGDGGCGKTSLLM 35 V ++G+ G GK++L+ Sbjct: 372 VAVLGETGSGKSTLMN 387 >5DO7-A nrPDB Length = 666 Score = 27.5 bits (60), Expect = 4.0, Method: Composition-based stats. Identities = 7/15 (46%), Positives = 11/15 (73%) Query: 20 VVLVGDGGCGKTSLL 34 + ++G G GKT+LL Sbjct: 82 MCILGSSGSGKTTLL 96 >5NP9-A nrPDB Length = 158 Score = 27.5 bits (60), Expect = 4.0, Method: Composition-based stats. Identities = 10/21 (47%), Positives = 13/21 (61%) Query: 20 VVLVGDGGCGKTSLLMVFADG 40 + L GD G GKT+ FA+G Sbjct: 31 LTLEGDLGAGKTTFTKGFAEG 51 >4XIG-S nrPDB Length = 363 Score = 27.5 bits (60), Expect = 4.0, Method: Composition-based stats. Identities = 12/47 (25%), Positives = 22/47 (46%), Gaps = 10/47 (21%) Query: 20 VVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMVNLQVKGKPVH 66 VVLVG GCGK++ + G + E +++ G+ ++ Sbjct: 33 VVLVGPSGCGKST-TLRMVAG---------LEEISGGTIRIDGRVIN 69 >3NHB-A nrPDB Length = 306 Score = 27.5 bits (60), Expect = 4.1, Method: Composition-based stats. Identities = 10/23 (43%), Positives = 13/23 (56%), Gaps = 3/23 (13%) Query: 20 VVLVGDGGCGKTS---LLMVFAD 39 + LVG G GK++ LL F D Sbjct: 83 LALVGPSGAGKSTILRLLFRFYD 105 >5CDF-E nrPDB Length = 474 Score = 27.5 bits (60), Expect = 4.2, Method: Composition-based stats. Identities = 10/29 (34%), Positives = 14/29 (48%) Query: 12 PPGVRSVKVVLVGDGGCGKTSLLMVFADG 40 P + K+ L G G GKT L+M + Sbjct: 139 APYSKGGKIGLFGGAGVGKTVLIMELINN 167 >6C2V-A nrPDB Length = 115 Score = 27.5 bits (60), Expect = 4.3, Method: Composition-based stats. Identities = 14/33 (42%), Positives = 18/33 (54%), Gaps = 2/33 (6%) Query: 20 VVLVGDGGCGKTSL--LMVFADGAFPESYTPTV 50 VV+VG G GKT+L L A P++ TV Sbjct: 5 VVIVGPSGAGKTTLDELARKAKEEVPDAEIRTV 37 Score = 27.5 bits (60), Expect = 4.3, Method: Composition-based stats. Identities = 8/16 (50%), Positives = 11/16 (68%) Query: 20 VVLVGDGGCGKTSLLM 35 VV+VG G GK++L Sbjct: 58 VVIVGPSGSGKSTLAK 73 >3WMF-A nrPDB Length = 621 Score = 27.5 bits (60), Expect = 4.4, Method: Composition-based stats. Identities = 11/23 (47%), Positives = 14/23 (60%), Gaps = 3/23 (13%) Query: 20 VVLVGDGGCGKTS---LLMVFAD 39 V +VG G GK++ LLM F D Sbjct: 382 VAIVGGSGAGKSTIIQLLMRFYD 404 >4Q7K-A nrPDB Length = 250 Score = 27.5 bits (60), Expect = 4.4, Method: Composition-based stats. Identities = 6/16 (37%), Positives = 12/16 (75%) Query: 20 VVLVGDGGCGKTSLLM 35 V ++G+ G GK++L+ Sbjct: 34 VAVLGETGSGKSTLMN 49 >6FOC-D nrPDB Length = 475 Score = 27.5 bits (60), Expect = 4.6, Method: Composition-based stats. Identities = 11/23 (47%), Positives = 13/23 (56%) Query: 13 PGVRSVKVVLVGDGGCGKTSLLM 35 P VR K+ L G G GKT L+ Sbjct: 149 PYVRGGKIALFGGAGVGKTVLIQ 171 >3WBG-A nrPDB Length = 153 Score = 27.5 bits (60), Expect = 4.6, Method: Composition-based stats. Identities = 12/35 (34%), Positives = 15/35 (42%), Gaps = 5/35 (14%) Query: 45 SYTPTVFERYMVNLQV---KGKPVHLHIWDTAGQD 76 + T + V V GK VHL WD GQ+ Sbjct: 90 EFDETTADDRKVKSIVTLDGGKLVHLQKWD--GQE 122 >1S0U-A nrPDB Length = 408 Score = 27.2 bits (59), Expect = 4.8, Method: Composition-based stats. Identities = 16/76 (21%), Positives = 28/76 (36%), Gaps = 13/76 (17%) Query: 124 IIVVGCKTDLCKDKSLVNKLRRNGLEPVTYHRGQEMARSVGA--VAYLECSARLHDNVHA 181 II+V K DL +K Y + +E + A + SA N+ Sbjct: 138 IIIVQNKIDLVDEKQAEE----------NYEQIKEFVKGTIAENAPIIPISAHHEANID- 186 Query: 182 VFQEAAEVALSSRGRN 197 V +A + + + R+ Sbjct: 187 VLLKAIQDFIPTPKRD 202 >6FKI-F nrPDB Length = 498 Score = 27.2 bits (59), Expect = 4.8, Method: Composition-based stats. Identities = 9/22 (40%), Positives = 12/22 (54%) Query: 19 KVVLVGDGGCGKTSLLMVFADG 40 K+ L G G GKT L+M + Sbjct: 167 KIGLFGGAGVGKTVLIMELINN 188 >2W6I-D nrPDB Length = 528 Score = 27.2 bits (59), Expect = 4.8, Method: Composition-based stats. Identities = 9/22 (40%), Positives = 12/22 (54%) Query: 19 KVVLVGDGGCGKTSLLMVFADG 40 K+ L G G GKT L+M + Sbjct: 201 KIGLFGGAGVGKTVLIMELINN 222 >1LVG-A nrPDB Length = 198 Score = 27.2 bits (59), Expect = 4.9, Method: Composition-based stats. Identities = 9/18 (50%), Positives = 11/18 (61%) Query: 20 VVLVGDGGCGKTSLLMVF 37 VVL G G GK++LL Sbjct: 7 VVLSGPSGAGKSTLLKKL 24 >1JAL-A nrPDB Length = 363 Score = 27.2 bits (59), Expect = 4.9, Method: Composition-based stats. Identities = 13/74 (17%), Positives = 20/74 (27%), Gaps = 16/74 (21%) Query: 18 VKVVLVGDGGCGKTSLLMVFADGAFPESYTP--TVFERYMVNLQVKGK------------ 63 K +VG GK++L + P T+ V + Sbjct: 3 FKCGIVGLPNVGKSTLFNALTKAGIEAANYPFCTIEPNTGVVPMPDPRLDALAEIVKPER 62 Query: 64 --PVHLHIWDTAGQ 75 P + D AG Sbjct: 63 ILPTTMEFVDIAGL 76 >6CEP-A nrPDB Length = 334 Score = 27.2 bits (59), Expect = 5.0, Method: Composition-based stats. Identities = 8/28 (28%), Positives = 13/28 (46%) Query: 106 NIFNRWYPEVNHFCKKVPIIVVGCKTDL 133 N+F P++ + IIVV D+ Sbjct: 116 NVFKFIIPQIVKYSPDCIIIVVSNPVDI 143 >1WDT-A nrPDB Length = 665 Score = 27.2 bits (59), Expect = 5.0, Method: Composition-based stats. Identities = 12/34 (35%), Positives = 15/34 (44%), Gaps = 2/34 (5%) Query: 8 GEEAPPGVRSVKVVLVGDGGCGKTSLLMVFADGA 41 G E +R+ V LVG G GKT+L Sbjct: 2 GTEGGAMIRT--VALVGHAGSGKTTLTEALLYKT 33 >5EUM-A nrPDB Length = 258 Score = 27.2 bits (59), Expect = 5.0, Method: Composition-based stats. Identities = 10/23 (43%), Positives = 13/23 (56%), Gaps = 3/23 (13%) Query: 20 VVLVGDGGCGKTS---LLMVFAD 39 V LVG G GK++ L+ F D Sbjct: 48 VALVGRSGSGKSTIANLVTRFYD 70 >2XND-D nrPDB Length = 467 Score = 27.2 bits (59), Expect = 5.4, Method: Composition-based stats. Identities = 9/22 (40%), Positives = 12/22 (54%) Query: 19 KVVLVGDGGCGKTSLLMVFADG 40 K+ L G G GKT L+M + Sbjct: 143 KIGLFGGAGVGKTVLIMELINN 164 >4XD7-D nrPDB Length = 483 Score = 27.2 bits (59), Expect = 5.4, Method: Composition-based stats. Identities = 8/22 (36%), Positives = 10/22 (45%) Query: 19 KVVLVGDGGCGKTSLLMVFADG 40 K+ L G G GKT L+ Sbjct: 163 KIGLFGGAGVGKTVLIQELIHN 184 >3M6A-A nrPDB Length = 543 Score = 27.2 bits (59), Expect = 5.5, Method: Composition-based stats. Identities = 11/27 (40%), Positives = 14/27 (51%), Gaps = 3/27 (11%) Query: 16 RSVK---VVLVGDGGCGKTSLLMVFAD 39 +S+K + L G G GKTSL A Sbjct: 104 KSLKGPILCLAGPPGVGKTSLAKSIAK 130 >6AQ1-A nrPDB Length = 136 Score = 27.2 bits (59), Expect = 5.6, Method: Composition-based stats. Identities = 12/35 (34%), Positives = 15/35 (42%), Gaps = 5/35 (14%) Query: 45 SYTPTVFERYMVNLQV---KGKPVHLHIWDTAGQD 76 + T + V V GK VHL WD GQ+ Sbjct: 73 EFDETTADDRKVKSIVTLDGGKLVHLQKWD--GQE 105 >2FGK-A nrPDB Length = 247 Score = 26.8 bits (58), Expect = 6.3, Method: Composition-based stats. Identities = 8/26 (30%), Positives = 14/26 (53%) Query: 20 VVLVGDGGCGKTSLLMVFADGAFPES 45 + +VG G GK++L + PE+ Sbjct: 38 IGIVGRSGSGKSTLTKLIQRFYIPEN 63 >4O0M-A nrPDB Length = 524 Score = 26.8 bits (58), Expect = 6.6, Method: Composition-based stats. Identities = 8/34 (23%), Positives = 13/34 (38%) Query: 21 VLVGDGGCGKTSLLMVFADGAFPESYTPTVFERY 54 ++ G G GKT + F P +F + Sbjct: 44 LVSGTSGTGKTLFAVQFLYNGITIFNEPGIFVTF 77 >4F4J-A nrPDB Length = 202 Score = 26.8 bits (58), Expect = 6.8, Method: Composition-based stats. Identities = 9/25 (36%), Positives = 13/25 (52%) Query: 13 PGVRSVKVVLVGDGGCGKTSLLMVF 37 G S +V+ G G GK++LL Sbjct: 13 QGSMSRPIVISGPSGTGKSTLLKKL 37 >3N5F-A nrPDB Length = 408 Score = 26.8 bits (58), Expect = 7.3, Method: Composition-based stats. Identities = 7/61 (11%), Positives = 18/61 (29%), Gaps = 10/61 (16%) Query: 72 TAGQDDYDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVNHFCKKVPIIVVGCKT 131 TA + L + +A + + +++ +++VG Sbjct: 31 TAEERRAKDLVASYMREAGLFV----------YEDAAGNLIGRKEGTNPDATVVLVGSHL 80 Query: 132 D 132 D Sbjct: 81 D 81 >5JWO-A nrPDB Length = 247 Score = 26.8 bits (58), Expect = 7.4, Method: Composition-based stats. Identities = 8/34 (23%), Positives = 13/34 (38%) Query: 21 VLVGDGGCGKTSLLMVFADGAFPESYTPTVFERY 54 ++ G G GKT + F P +F + Sbjct: 36 LVSGTSGTGKTLFAVQFLYNGITIFNEPGIFVTF 69 >5TY0-A nrPDB Length = 422 Score = 26.8 bits (58), Expect = 8.1, Method: Composition-based stats. Identities = 12/70 (17%), Positives = 23/70 (32%), Gaps = 10/70 (14%) Query: 66 HLHIWDTAGQDDYDRLRPLFYPDASVLLLCFDV---TSPNSFDNIFNRWYPEVNHFCKKV 122 ++I DT G D+ ++ FD P S + + W + ++ Sbjct: 84 RINIIDTPGHVDFMIEVERSLRVLDGAVVVFDSVAGVEPQS-ETV---WRQANKYGVPRI 139 Query: 123 PIIVVGCKTD 132 + K D Sbjct: 140 VFV---NKMD 146 >3PEN-A nrPDB Length = 403 Score = 26.4 bits (57), Expect = 8.9, Method: Composition-based stats. Identities = 12/78 (15%), Positives = 31/78 (39%), Gaps = 9/78 (11%) Query: 124 IIVVGCKTDLCKDKSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNVHAVF 183 +I+V K D+ + +++ R+ A +V + SA N+ ++ Sbjct: 132 LIIVQNKVDVVSKEEALSQYRQIKQFTKGT-----WAENVPIIP---VSALHKINIDSLI 183 Query: 184 QEAAEVALSSRGRNFWRR 201 + E + + R+ ++ Sbjct: 184 EGI-EEYIKTPYRDLSQK 200 >5ANB-A nrPDB Length = 398 Score = 26.4 bits (57), Expect = 9.0, Method: Composition-based stats. Identities = 7/49 (14%), Positives = 18/49 (36%), Gaps = 1/49 (2%) Query: 133 LCKDKSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNVHA 181 L + K + +T G+ A + +++ S++ +H Sbjct: 332 LKGCVAGPRKRALTLRKSITTQTGRA-ALEKITLKFIDTSSKFGHGLHQ 379 >2KHQ-A nrPDB Length = 110 Score = 26.4 bits (57), Expect = 9.1, Method: Composition-based stats. Identities = 9/54 (16%), Positives = 18/54 (33%) Query: 134 CKDKSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNVHAVFQEAA 187 K + + R L+ + Q+ G E +L+ + F +A Sbjct: 30 SAYKHIKDHFRHKLLKDIKRTEYQKFLNEYGLTHSYETIRKLNSYIRNAFDDAI 83 >1OXV-A nrPDB Length = 353 Score = 26.4 bits (57), Expect = 9.2, Method: Composition-based stats. Identities = 9/35 (25%), Positives = 15/35 (42%), Gaps = 1/35 (2%) Query: 22 LVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMV 56 ++G G GKT+ + G S F+ +V Sbjct: 36 ILGPSGAGKTTFM-RIIAGLDVPSTGELYFDDRLV 69 >2XTZ-A nrPDB Length = 354 Score = 26.4 bits (57), Expect = 9.8, Method: Composition-based stats. Identities = 7/24 (29%), Positives = 14/24 (58%) Query: 13 PGVRSVKVVLVGDGGCGKTSLLMV 36 G+ K++L+G G GK+++ Sbjct: 5 SGIHIRKLLLLGAGESGKSTIFKQ 28 Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta Posted date: Jan 3, 2023 9:05 PM Number of letters in database: 10,336,785 Number of sequences in database: 36,641 Lambda K H 0.312 0.152 0.453 Lambda K H 0.267 0.0468 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 9,178,964 Number of Sequences: 36641 Number of extensions: 392945 Number of successful extensions: 2857 Number of sequences better than 10.0: 446 Number of HSP's better than 10.0 without gapping: 470 Number of HSP's successfully gapped in prelim test: 161 Number of HSP's that attempted gapping in prelim test: 1748 Number of HSP's gapped (non-prelim): 697 length of query: 210 length of database: 10,336,785 effective HSP length: 93 effective length of query: 117 effective length of database: 6,929,172 effective search space: 810713124 effective search space used: 810713124 T: 11 A: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.1 bits) S2: 57 (26.4 bits)