BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.


Reference for composition-based statistics starting in round 2:
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,  
Eugene V. Koonin, and Stephen F. Altschul (2001), 
"Improving the accuracy of PSI-BLAST protein database searches with 
composition-based statistics and other refinements",  Nucleic Acids Res. 29:2994-3005.

Query= O00212
         (210 letters)

Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta 
           36,641 sequences; 10,336,785 total letters

Searching..................................................done


Results from round 1


                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

2J1L-A nrPDB                                                          396   e-111
5C2K-A nrPDB                                                          207   3e-54
5ZHX-e nrPDB                                                          206   6e-54
5ZVP-A nrPDB                                                          205   9e-54
5JCP-B nrPDB                                                          204   2e-53
3A58-B nrPDB                                                          203   4e-53
3TH5-A nrPDB                                                          201   2e-52
3RYT-C nrPDB                                                          200   4e-52
2FV8-A nrPDB                                                          199   6e-52
2WKQ-A nrPDB                                                          194   2e-50
1RYH-A nrPDB                                                          191   1e-49
2W2X-A nrPDB                                                          189   9e-49
4MIT-A nrPDB                                                          184   3e-47
5VCU-A nrPDB                                                          183   4e-47
3VHL-B nrPDB                                                          182   7e-47
2ATX-A nrPDB                                                          171   2e-43
2WBL-C nrPDB                                                          167   2e-42
1M7B-A nrPDB                                                          167   4e-42
1GWN-A nrPDB                                                          166   6e-42
2NTY-C nrPDB                                                          164   2e-41
3BWD-D nrPDB                                                          164   3e-41
2J0V-A nrPDB                                                          159   7e-40
3REG-A nrPDB                                                          159   1e-39
2Q3H-A nrPDB                                                          158   2e-39
2REX-B nrPDB                                                          157   4e-39
4U5X-A nrPDB                                                          155   1e-38
5HZH-A nrPDB                                                          153   5e-38
6O62-A nrPDB                                                           99   1e-21
2WWX-A nrPDB                                                           99   1e-21
3L0I-B nrPDB                                                           99   2e-21
2RHD-A nrPDB                                                           96   1e-20
3CPH-A nrPDB                                                           96   2e-20
1EK0-A nrPDB                                                           95   2e-20
2OCY-C nrPDB                                                           95   2e-20
5SZH-B nrPDB                                                           95   3e-20
2EW1-A nrPDB                                                           94   3e-20
4LHX-A nrPDB                                                           93   9e-20
5SZI-A nrPDB                                                           93   1e-19
5LPN-A nrPDB                                                           92   1e-19
6IF2-B nrPDB                                                           92   2e-19
5SZJ-A nrPDB                                                           92   2e-19
2G6B-A nrPDB                                                           92   2e-19
4M8N-E nrPDB                                                           91   4e-19
1YZU-A nrPDB                                                           90   5e-19
2IL1-A nrPDB                                                           90   8e-19
5LDD-C nrPDB                                                           89   2e-18
2OCB-A nrPDB                                                           88   2e-18
1WMS-A nrPDB                                                           88   2e-18
1X3S-A nrPDB                                                           87   4e-18
4QXA-A nrPDB                                                           87   5e-18
2N1B-A nrPDB                                                           87   6e-18
2A5J-A nrPDB                                                           87   7e-18
2FFQ-A nrPDB                                                           86   1e-17
2KE5-A nrPDB                                                           86   2e-17
4DXA-A nrPDB                                                           85   2e-17
4RKF-A nrPDB                                                           85   2e-17
5XOJ-A nrPDB                                                           85   2e-17
1D5C-A nrPDB                                                           85   2e-17
3OES-A nrPDB                                                           85   2e-17
4FMC-F nrPDB                                                           85   3e-17
4PHF-A nrPDB                                                           84   3e-17
2F7S-A nrPDB                                                           84   4e-17
4G01-B nrPDB                                                           84   4e-17
3WYF-A nrPDB                                                           84   4e-17
5CLL-A nrPDB                                                           84   5e-17
5UWI-A nrPDB                                                           84   6e-17
2HUP-A nrPDB                                                           83   8e-17
3T5G-A nrPDB                                                           82   1e-16
5FBL-B nrPDB                                                           82   1e-16
4KLZ-A nrPDB                                                           82   1e-16
2GIL-A nrPDB                                                           82   2e-16
2FG5-A nrPDB                                                           82   2e-16
2F9L-A nrPDB                                                           82   2e-16
2IEY-A nrPDB                                                           82   2e-16
2P5S-A nrPDB                                                           82   2e-16
5YOZ-A nrPDB                                                           82   2e-16
3CUE-F nrPDB                                                           81   4e-16
2IEZ-A nrPDB                                                           81   4e-16
4UJ4-A nrPDB                                                           81   4e-16
5LEF-A nrPDB                                                           80   6e-16
3BFK-A nrPDB                                                           80   6e-16
1YZN-A nrPDB                                                           80   7e-16
4KU4-A nrPDB                                                           80   8e-16
1Z0A-A nrPDB                                                           79   1e-15
5CM8-B nrPDB                                                           79   1e-15
3RAB-A nrPDB                                                           79   2e-15
3BC1-A nrPDB                                                           78   3e-15
1Z22-A nrPDB                                                           78   3e-15
1YVD-A nrPDB                                                           76   8e-15
6IYB-A nrPDB                                                           76   8e-15
1Z0F-A nrPDB                                                           76   1e-14
4RKE-A nrPDB                                                           76   1e-14
1TU4-A nrPDB                                                           75   2e-14
3CPJ-B nrPDB                                                           75   2e-14
1ZBD-A nrPDB                                                           75   3e-14
1ZC4-A nrPDB                                                           74   3e-14
3DZ8-A nrPDB                                                           74   4e-14
5UB8-A nrPDB                                                           74   4e-14
5XR6-A nrPDB                                                           74   5e-14
2GF9-A nrPDB                                                           74   5e-14
2ERY-A nrPDB                                                           74   6e-14
2BMD-A nrPDB                                                           73   9e-14
2ERX-A nrPDB                                                           73   1e-13
4DJT-A nrPDB                                                           73   1e-13
4KYI-B nrPDB                                                           72   1e-13
2HEI-A nrPDB                                                           72   2e-13
6HUF-A nrPDB                                                           71   4e-13
3RWM-B nrPDB                                                           70   8e-13
2O52-A nrPDB                                                           69   2e-12
3TSO-A nrPDB                                                           68   3e-12
3E5H-A nrPDB                                                           65   2e-11
5XC3-A nrPDB                                                           65   3e-11
3RAP-R nrPDB                                                           61   3e-10
1Z06-A nrPDB                                                           61   3e-10
2G77-B nrPDB                                                           61   3e-10
2FN4-A nrPDB                                                           61   4e-10
5WDQ-A nrPDB                                                           60   6e-10
2GF0-A nrPDB                                                           58   4e-09
5WDR-A nrPDB                                                           57   4e-09
2ATV-A nrPDB                                                           57   5e-09
3CLV-A nrPDB                                                           57   6e-09
3CON-A nrPDB                                                           57   6e-09
5UHV-A nrPDB                                                           57   7e-09
4WA7-A nrPDB                                                           55   2e-08
3CBQ-A nrPDB                                                           55   2e-08
3PIR-A nrPDB                                                           55   2e-08
4CZ2-A nrPDB                                                           54   4e-08
6FF8-A nrPDB                                                           54   6e-08
5C1S-A nrPDB                                                           52   1e-07
3DPU-A nrPDB                                                           49   1e-06
3Q85-A nrPDB                                                           49   2e-06
2NZJ-A nrPDB                                                           49   2e-06
3Q72-A nrPDB                                                           48   3e-06
6HLU-A nrPDB                                                           47   4e-06
3D6T-B nrPDB                                                           47   4e-06
4WNR-A nrPDB                                                           47   8e-06
2AL7-A nrPDB                                                           45   3e-05
4ILE-A nrPDB                                                           44   4e-05
2CJW-A nrPDB                                                           43   8e-05
2G3Y-A nrPDB                                                           42   1e-04
3C5C-A nrPDB                                                           42   2e-04
3IHW-A nrPDB                                                           39   0.002
4C0K-A nrPDB                                                           39   0.002
2GJ9-A nrPDB                                                           39   0.002
3LRP-A nrPDB                                                           37   0.005
4YLG-A nrPDB                                                           37   0.007
2YC4-C nrPDB                                                           35   0.016
6CES-A nrPDB                                                           35   0.025
2IWR-A nrPDB                                                           35   0.028
2A5F-A nrPDB                                                           35   0.030
5NZV-F nrPDB                                                           34   0.046
3LVQ-E nrPDB                                                           34   0.058
1YZG-A nrPDB                                                           33   0.060
3O47-A nrPDB                                                           33   0.071
5UF8-A nrPDB                                                           33   0.079
6GNI-B nrPDB                                                           33   0.083
1Z6X-A nrPDB                                                           33   0.094
1M2O-B nrPDB                                                           33   0.095
6FAE-B nrPDB                                                           33   0.099
4ZI3-A nrPDB                                                           33   0.11 
4M9Q-A nrPDB                                                           33   0.13 
5DI3-B nrPDB                                                           33   0.13 
3AQ4-A nrPDB                                                           32   0.24 
2H16-A nrPDB                                                           32   0.26 
2B6H-A nrPDB                                                           31   0.33 
1MOZ-A nrPDB                                                           31   0.36 
3BH6-A nrPDB                                                           30   0.55 
1J2J-A nrPDB                                                           30   0.70 
2YYZ-A nrPDB                                                           28   2.2  
5IRR-A nrPDB                                                           28   2.3  
1SHZ-A nrPDB                                                           28   2.4  
2CC0-A nrPDB                                                           28   2.5  
2X77-A nrPDB                                                           28   2.7  
1D5A-A nrPDB                                                           28   3.3  
5KDW-A nrPDB                                                           28   3.5  
3A52-A nrPDB                                                           28   3.5  
6D2K-A nrPDB                                                           28   3.5  
1ZCB-A nrPDB                                                           28   4.0  
5KSO-A nrPDB                                                           27   4.6  
6HQW-A nrPDB                                                           27   5.2  
4LTY-C nrPDB                                                           27   6.0  
5KU1-A nrPDB                                                           27   7.1  
3PV0-A nrPDB                                                           27   8.7  

>2J1L-A nrPDB
          Length = 214

 Score =  396 bits (1017), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 190/191 (99%), Positives = 190/191 (99%)

Query: 7   AGEEAPPGVRSVKVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMVNLQVKGKPVH 66
           AGEEAPPGVRSVKVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMVNLQVKGKPVH
Sbjct: 24  AGEEAPPGVRSVKVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMVNLQVKGKPVH 83

Query: 67  LHIWDTAGQDDYDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVNHFCKKVPIIV 126
           LHIWDTAGQDDYDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVNHFCKKVPIIV
Sbjct: 84  LHIWDTAGQDDYDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVNHFCKKVPIIV 143

Query: 127 VGCKTDLCKDKSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNVHAVFQEA 186
           VGCKTDL KDKSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNVHAVFQEA
Sbjct: 144 VGCKTDLRKDKSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNVHAVFQEA 203

Query: 187 AEVALSSRGRN 197
           AEVALSSRGRN
Sbjct: 204 AEVALSSRGRN 214


>5C2K-A nrPDB
          Length = 415

 Score =  207 bits (527), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 96/189 (50%), Positives = 126/189 (66%), Gaps = 1/189 (0%)

Query: 6   AAGEEAPPGVRSVKVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMVNLQVKGKPV 65
           ++G      +R  K+V+VGDG CGKT LL+VF+   FPE Y PTVFE Y+ +++V GK V
Sbjct: 2   SSGSSGMAAIRK-KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQV 60

Query: 66  HLHIWDTAGQDDYDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVNHFCKKVPII 125
            L +WDTAGQ+DYDRLRPL YPD  V+L+CF + SP+S +NI  +W PEV HFC  VPII
Sbjct: 61  ELALWDTAGQEDYDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVKHFCPNVPII 120

Query: 126 VVGCKTDLCKDKSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNVHAVFQE 185
           +VG K DL  D+    +L +   EPV    G++MA  +GA  Y+ECSA+  D V  VF+ 
Sbjct: 121 LVGNKKDLRNDEHTRRELAKMKQEPVKPEEGRDMANRIGAFGYMECSAKTKDGVREVFEM 180

Query: 186 AAEVALSSR 194
           A   AL +R
Sbjct: 181 ATRAALQAR 189


>5ZHX-e nrPDB
          Length = 198

 Score =  206 bits (524), Expect = 6e-54,   Method: Compositional matrix adjust.
 Identities = 94/176 (53%), Positives = 121/176 (68%)

Query: 19  KVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMVNLQVKGKPVHLHIWDTAGQDDY 78
           K+V+VGDG CGKT LL+VF+   FPE Y PTVFE Y+ +++V GK V L +WDTAGQ+DY
Sbjct: 12  KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQVELALWDTAGQEDY 71

Query: 79  DRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVNHFCKKVPIIVVGCKTDLCKDKS 138
           DRLRPL YPD  V+L+CF + SP+S +NI  +W PEV HFC  VPII+VG K DL  D+ 
Sbjct: 72  DRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVKHFCPNVPIILVGNKKDLRNDEH 131

Query: 139 LVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNVHAVFQEAAEVALSSR 194
              +L +   EPV    G++MA  +GA  Y+ECSA+  D V  VF+ A   AL +R
Sbjct: 132 TRRELAKMKQEPVKPEEGRDMANRIGAFGYMECSAKTKDGVREVFEMATRAALQAR 187


>5ZVP-A nrPDB
          Length = 181

 Score =  205 bits (522), Expect = 9e-54,   Method: Compositional matrix adjust.
 Identities = 92/173 (53%), Positives = 124/173 (71%)

Query: 19  KVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMVNLQVKGKPVHLHIWDTAGQDDY 78
           K+V+VGDG CGKT LL+V + G FPE Y PTVFE Y+ +++V GK V L +WDTAGQ+DY
Sbjct: 7   KLVIVGDGACGKTCLLIVNSKGTFPEVYVPTVFENYVADVEVDGKHVELALWDTAGQEDY 66

Query: 79  DRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVNHFCKKVPIIVVGCKTDLCKDKS 138
           DRLRPL YPD+ V+L+CF + SP+S DN+  +W  EV HFC+ +PII+VGCK DL  D  
Sbjct: 67  DRLRPLSYPDSHVILICFAIDSPDSLDNVQEKWISEVLHFCQGLPIILVGCKKDLRHDPK 126

Query: 139 LVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNVHAVFQEAAEVAL 191
            + +L +   +PVT  +G+E+ + +GA  YLECSAR ++ V  VF+ A   AL
Sbjct: 127 TIEELHKTSQKPVTPEQGEEVRKKIGAYKYLECSARTNEGVREVFEAATRAAL 179


>5JCP-B nrPDB
          Length = 419

 Score =  204 bits (520), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 96/192 (50%), Positives = 125/192 (65%)

Query: 2   TAAQAAGEEAPPGVRSVKVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMVNLQVK 61
           TA+ + G E        K+V+VGDG CGKT LL+V +   FPE Y PTVFE Y+ +++V 
Sbjct: 228 TASNSPGIEGLSAAIRKKLVIVGDGACGKTCLLIVNSKDQFPEVYVPTVFENYVADIEVD 287

Query: 62  GKPVHLHIWDTAGQDDYDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVNHFCKK 121
           GK V L +WDTAGQ+DYDRLRPL YPD  V+L+CF + SP+S +NI  +W PEV HFC  
Sbjct: 288 GKQVELALWDTAGQEDYDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVKHFCPN 347

Query: 122 VPIIVVGCKTDLCKDKSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNVHA 181
           VPII+VG K DL  D+    +L +   EPV    G++MA  +GA  Y+ECSA+  D V  
Sbjct: 348 VPIILVGNKKDLRNDEHTRRELAKMKQEPVKPEEGRDMANRIGAFGYMECSAKTKDGVRE 407

Query: 182 VFQEAAEVALSS 193
           VF+ A   AL +
Sbjct: 408 VFEMATRAALQA 419


>3A58-B nrPDB
          Length = 188

 Score =  203 bits (517), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 90/176 (51%), Positives = 122/176 (69%)

Query: 19  KVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMVNLQVKGKPVHLHIWDTAGQDDY 78
           K+V+VGDG CGKT LL+V + G FPE Y PTVFE Y+ +++V G+ V L +WDTAGQ+DY
Sbjct: 12  KLVIVGDGACGKTCLLIVNSKGQFPEVYVPTVFENYVADVEVDGRRVELALWDTAGQEDY 71

Query: 79  DRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVNHFCKKVPIIVVGCKTDLCKDKS 138
           DRLRPL YPD++V+L+CF +  P+S +N+  +W  EV HFC+ VPII+VGCK DL  D  
Sbjct: 72  DRLRPLSYPDSNVVLICFSIDLPDSLENVQEKWIAEVLHFCQGVPIILVGCKVDLRNDPQ 131

Query: 139 LVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNVHAVFQEAAEVALSSR 194
            + +LR+ G +PVT   GQ +A  +GA  Y ECSA+    V  VF+ A   +L  +
Sbjct: 132 TIEQLRQEGQQPVTSQEGQSVADQIGATGYYECSAKTGYGVREVFEAATRASLMGK 187


>3TH5-A nrPDB
          Length = 204

 Score =  201 bits (510), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 92/176 (52%), Positives = 116/176 (65%)

Query: 16  RSVKVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMVNLQVKGKPVHLHIWDTAGQ 75
           +++K V+VGDG  GKT LL+ +   AFP  Y PTVF+ Y  N+ V GKPV+L +WDTAGQ
Sbjct: 29  QAIKCVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDGKPVNLGLWDTAGQ 88

Query: 76  DDYDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVNHFCKKVPIIVVGCKTDLCK 135
           +DYDRLRPL YP   V L+CF + SP SF+N+  +WYPEV H C   PII+VG K DL  
Sbjct: 89  EDYDRLRPLSYPQTDVFLICFSLVSPASFENVRAKWYPEVRHHCPNTPIILVGTKLDLRD 148

Query: 136 DKSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNVHAVFQEAAEVAL 191
           DK  + KL+   L P+TY +G  MA+ +GAV YLECSA     +  VF EA    L
Sbjct: 149 DKDTIEKLKEKKLTPITYPQGLAMAKEIGAVKYLECSALTQRGLKTVFDEAIRAVL 204


>3RYT-C nrPDB
          Length = 180

 Score =  200 bits (508), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 92/179 (51%), Positives = 117/179 (65%)

Query: 13  PGVRSVKVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMVNLQVKGKPVHLHIWDT 72
           P ++++K V+VGDG  GKT LL+ +   AFP  Y PTVF+ Y  N+ V GKPV+L +WDT
Sbjct: 2   PHMQAIKCVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDGKPVNLGLWDT 61

Query: 73  AGQDDYDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVNHFCKKVPIIVVGCKTD 132
           AG +DYDRLRPL YP   V L+CF + SP SF+N+  +WYPEV H C   PII+VG K D
Sbjct: 62  AGLEDYDRLRPLSYPQTDVFLICFSLVSPASFENVRAKWYPEVRHHCPNTPIILVGTKLD 121

Query: 133 LCKDKSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNVHAVFQEAAEVAL 191
           L  DK  + KL+   L P+TY +G  MA+ +GAV YLECSA     +  VF EA    L
Sbjct: 122 LRDDKDTIEKLKEKKLTPITYPQGLAMAKEIGAVKYLECSALTQRGLKTVFDEAIRAVL 180


>2FV8-A nrPDB
          Length = 207

 Score =  199 bits (507), Expect = 6e-52,   Method: Compositional matrix adjust.
 Identities = 94/176 (53%), Positives = 118/176 (67%)

Query: 19  KVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMVNLQVKGKPVHLHIWDTAGQDDY 78
           K+V+VGDG CGKT LL+VF+   FPE Y PTVFE Y+ +++V GK V L +WDTAGQ+DY
Sbjct: 27  KLVVVGDGACGKTCLLIVFSKDEFPEVYVPTVFENYVADIEVDGKQVELALWDTAGQEDY 86

Query: 79  DRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVNHFCKKVPIIVVGCKTDLCKDKS 138
           DRLRPL YPD  V+L+CF V SP+S +NI  +W PEV HFC  VPII+V  K DL  D+ 
Sbjct: 87  DRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWVPEVKHFCPNVPIILVANKKDLRSDEH 146

Query: 139 LVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNVHAVFQEAAEVALSSR 194
           +  +L R   EPV    G+ MA  + A  YLECSA+  + V  VF+ A   AL  R
Sbjct: 147 VRTELARMKQEPVRTDDGRAMAVRIQAYDYLECSAKTKEGVREVFETATRAALQKR 202


>2WKQ-A nrPDB
          Length = 332

 Score =  194 bits (494), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 90/174 (51%), Positives = 112/174 (64%)

Query: 18  VKVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMVNLQVKGKPVHLHIWDTAGQDD 77
           +K V+VGDG  GKT LL+ +   AFP  Y PTVF+ Y  N+ V GKPV+L +WDTAG +D
Sbjct: 156 IKCVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDGKPVNLGLWDTAGLED 215

Query: 78  YDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVNHFCKKVPIIVVGCKTDLCKDK 137
           YDRLRPL YP   V L+CF + SP SF ++  +WYPEV H C   PII+VG K DL  DK
Sbjct: 216 YDRLRPLSYPQTDVFLICFSLVSPASFHHVRAKWYPEVRHHCPNTPIILVGTKLDLRDDK 275

Query: 138 SLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNVHAVFQEAAEVAL 191
             + KL+   L P+TY +G  MA+ +GAV YLECSA     +  VF EA    L
Sbjct: 276 DTIEKLKEKKLTPITYPQGLAMAKEIGAVKYLECSALTQRGLKTVFDEAIRAVL 329


>1RYH-A nrPDB
          Length = 203

 Score =  191 bits (486), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 93/196 (47%), Positives = 118/196 (60%), Gaps = 19/196 (9%)

Query: 15  VRSVKVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMVNLQVKGKPVHLHIWDTAG 74
           ++++K V+VGDG  GKT LL+ +   AFP  Y PTVF+ Y  N+ V GKPV+L +WDTAG
Sbjct: 3   MQAIKCVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDGKPVNLGLWDTAG 62

Query: 75  QDDYDRLRPLFYPD-------------------ASVLLLCFDVTSPNSFDNIFNRWYPEV 115
           Q+DYDRLRPL YP                    A V L+CF + SP SF+N+  +WYPEV
Sbjct: 63  QEDYDRLRPLSYPQTVGETYGKDITSRGKDKPIADVFLICFSLVSPASFENVRAKWYPEV 122

Query: 116 NHFCKKVPIIVVGCKTDLCKDKSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARL 175
            H C   PII+VG K DL  DK  + KL+   L P+TY +G  MA+ +GAV YLECSA  
Sbjct: 123 RHHCPNTPIILVGTKLDLRDDKDTIEKLKEKKLTPITYPQGLAMAKEIGAVKYLECSALT 182

Query: 176 HDNVHAVFQEAAEVAL 191
              +  VF EA    L
Sbjct: 183 QRGLKTVFDEAIRAVL 198


>2W2X-A nrPDB
          Length = 185

 Score =  189 bits (479), Expect = 9e-49,   Method: Compositional matrix adjust.
 Identities = 86/178 (48%), Positives = 114/178 (64%)

Query: 14  GVRSVKVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMVNLQVKGKPVHLHIWDTA 73
           G +++K V+VGD   GKT LL+ +   AFP  Y PTVF+ Y  N+ V  KPV+L +WDTA
Sbjct: 6   GSQAIKCVVVGDVAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDSKPVNLGLWDTA 65

Query: 74  GQDDYDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVNHFCKKVPIIVVGCKTDL 133
           GQ+DYDRLRPL YP   V L+CF + SP S++N+  +W+PEV H C   PII+VG K DL
Sbjct: 66  GQEDYDRLRPLSYPQTDVFLICFSLVSPASYENVRAKWFPEVRHHCPSTPIILVGTKLDL 125

Query: 134 CKDKSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNVHAVFQEAAEVAL 191
             DK  + KL+   L P+TY +G  +A+ + +V YLECSA     +  VF EA    L
Sbjct: 126 RDDKDTIEKLKEKKLAPITYPQGLALAKEIDSVKYLECSALTQRGLKTVFDEAIRAVL 183


>4MIT-A nrPDB
          Length = 186

 Score =  184 bits (467), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 81/175 (46%), Positives = 117/175 (66%)

Query: 17  SVKVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMVNLQVKGKPVHLHIWDTAGQD 76
           S+K+V+VGDG  GKT LL+ ++   FPE Y PTVF+ Y+V+L    + + L +WDTAG +
Sbjct: 10  SIKLVVVGDGAVGKTCLLISYSIRKFPEDYIPTVFDNYVVSLTAGTRQIQLALWDTAGLE 69

Query: 77  DYDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVNHFCKKVPIIVVGCKTDLCKD 136
           +YD+LRPL Y  AS+ L+CF VTS  S+DN+  +W+PEV HF  KVPII+VG K D   D
Sbjct: 70  EYDQLRPLSYSSASIFLICFSVTSSVSYDNVITKWHPEVIHFAPKVPIILVGTKLDTRND 129

Query: 137 KSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNVHAVFQEAAEVAL 191
            ++V +L   G+  +   +G+E+   + AV Y+ECSA+  +N+  VF EA +  L
Sbjct: 130 PAIVKRLTEQGMTVINTAKGEELKNRIKAVKYIECSAKTSENLKTVFDEAVKTVL 184


>5VCU-A nrPDB
          Length = 208

 Score =  183 bits (465), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 81/183 (44%), Positives = 118/183 (64%)

Query: 15  VRSVKVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMVNLQVKGKPVHLHIWDTAG 74
           + S+K V+VGDG  GKT+LL+ ++ G FPE Y PTVF+ Y  N+      V + ++DTAG
Sbjct: 9   MESIKCVVVGDGAVGKTALLIAYSSGCFPEDYVPTVFDNYNKNIPYGDGIVSIALYDTAG 68

Query: 75  QDDYDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVNHFCKKVPIIVVGCKTDLC 134
           Q+DYDRLRPL YPD  V L+CF + +PNS +N  ++W  E+ H+    PI++VG K DL 
Sbjct: 69  QEDYDRLRPLSYPDTDVFLVCFSLENPNSLENCHSKWAEELKHYNPDTPIVLVGTKLDLK 128

Query: 135 KDKSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNVHAVFQEAAEVALSSR 194
           KD+  V KL+   + PVT  +GQEM   + A  Y+ECSA+  +N+   F  A ++A+  R
Sbjct: 129 KDEEYVKKLKEKKISPVTTEQGQEMKDKIKACGYIECSAKTMENLTEAFNMAIDIAMKQR 188

Query: 195 GRN 197
            ++
Sbjct: 189 LKD 191


>3VHL-B nrPDB
          Length = 195

 Score =  182 bits (463), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 84/194 (43%), Positives = 117/194 (60%)

Query: 8   GEEAPPGVRSVKVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMVNLQVKGKPVHL 67
           G     G++++K V+VGDG  GK  LL+ +    FP  Y PTVF+ Y V + + G+P  L
Sbjct: 1   GSSGSSGMQTIKCVVVGDGAVGKNCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTL 60

Query: 68  HIWDTAGQDDYDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVNHFCKKVPIIVV 127
            ++DTAGQ+DYDRLRPL YP   V L+CF V SP+SF+N+  +W PE+ H C K P ++V
Sbjct: 61  GLFDTAGQEDYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHCPKTPFLLV 120

Query: 128 GCKTDLCKDKSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNVHAVFQEAA 187
           G + DL  D S + KL +N  +P+T    +++AR + AV Y+ECSA     +  VF EA 
Sbjct: 121 GTQIDLRDDPSTIEKLAKNKQKPITPETAEKLARDLKAVKYVECSALTQKGLKNVFDEAI 180

Query: 188 EVALSSRGRNFWRR 201
             AL        RR
Sbjct: 181 LAALEPPEPKKSRR 194


>2ATX-A nrPDB
          Length = 194

 Score =  171 bits (432), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 79/174 (45%), Positives = 109/174 (62%)

Query: 13  PGVRSVKVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMVNLQVKGKPVHLHIWDT 72
           PG   +K V+VGDG  GKT LLM +A+ AFPE Y PTVF+ Y V++ V GK   L ++DT
Sbjct: 14  PGALMLKCVVVGDGAVGKTCLLMSYANDAFPEEYVPTVFDHYAVSVTVGGKQYLLGLYDT 73

Query: 73  AGQDDYDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVNHFCKKVPIIVVGCKTD 132
           AGQ+DYDRLRPL YP   V L+CF V +P SF N+   W PE+  +   VP +++G + D
Sbjct: 74  AGQEDYDRLRPLSYPMTDVFLICFSVVNPASFQNVKEEWVPELKEYAPNVPFLLIGTQID 133

Query: 133 LCKDKSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNVHAVFQEA 186
           L  D   + +L     +P+   +GQ++A+ +GA  Y+ECSA     +  VF EA
Sbjct: 134 LRDDPKTLARLNDMKEKPICVEQGQKLAKEIGACCYVECSALTQKGLKTVFDEA 187


>2WBL-C nrPDB
          Length = 180

 Score =  167 bits (424), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 80/176 (45%), Positives = 109/176 (61%), Gaps = 2/176 (1%)

Query: 16  RSVKVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMVNLQVKGKPVHLHIWDTAGQ 75
           R +K V VGDG  GKT +L+ +    FP  Y PTVF+ +  N+ V G  V+L +WDTAGQ
Sbjct: 5   RFIKCVTVGDGAVGKTCMLISYTGNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWDTAGQ 64

Query: 76  DDYDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVNHFCKKVPIIVVGCKTDLCK 135
           +DY+RLRPL Y  A V LL F + S  S++NI  +W PE+ H+   +PI++VG K DL  
Sbjct: 65  EDYNRLRPLSYRGADVFLLAFSLISKASYENIHKKWLPELKHYAPGIPIVLVGTKLDLRD 124

Query: 136 DKSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNVHAVFQEAAEVAL 191
           DK  +      G   +T  +G+E+ + +GAV YLECS++   NV AVF  A  VAL
Sbjct: 125 DKQFLKD--HPGAASITTAQGEELRKMIGAVRYLECSSKTQQNVKAVFDTAIRVAL 178


>1M7B-A nrPDB
          Length = 184

 Score =  167 bits (422), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 73/170 (42%), Positives = 109/170 (64%), Gaps = 1/170 (0%)

Query: 19  KVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMVNLQVKGKPVHLHIWDTAGQDDY 78
           K+V+VGD  CGKT+LL VFA   FPE+Y PTVFE Y  + ++  + + L +WDT+G   Y
Sbjct: 9   KIVVVGDSQCGKTALLHVFAKDCFPENYVPTVFENYTASFEIDTQRIELSLWDTSGSPYY 68

Query: 79  DRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVNHFCKKVPIIVVGCKTDLCKDKS 138
           D +RPL YPD+  +L+CFD++ P + D++  +W  E+  FC    +++VGCK+DL  D S
Sbjct: 69  DNVRPLSYPDSDAVLICFDISRPETLDSVLKKWKGEIQEFCPNTKMLLVGCKSDLRTDVS 128

Query: 139 LVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDN-VHAVFQEAA 187
            + +L  +   PV+Y +G  MA+ +GA  Y+ECSA   +N V  +F  A 
Sbjct: 129 TLVELSNHRQTPVSYDQGANMAKQIGAATYIECSALQSENSVRDIFHVAT 178


>1GWN-A nrPDB
          Length = 205

 Score =  166 bits (420), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 73/170 (42%), Positives = 109/170 (64%), Gaps = 1/170 (0%)

Query: 19  KVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMVNLQVKGKPVHLHIWDTAGQDDY 78
           K+V+VGD  CGKT+LL VFA   FPE+Y PTVFE Y  + ++  + + L +WDT+G   Y
Sbjct: 30  KIVVVGDSQCGKTALLHVFAKDCFPENYVPTVFENYTASFEIDTQRIELSLWDTSGSPYY 89

Query: 79  DRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVNHFCKKVPIIVVGCKTDLCKDKS 138
           D +RPL YPD+  +L+CFD++ P + D++  +W  E+  FC    +++VGCK+DL  D S
Sbjct: 90  DNVRPLSYPDSDAVLICFDISRPETLDSVLKKWKGEIQEFCPNTKMLLVGCKSDLRTDVS 149

Query: 139 LVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDN-VHAVFQEAA 187
            + +L  +   PV+Y +G  MA+ +GA  Y+ECSA   +N V  +F  A 
Sbjct: 150 TLVELSNHRQTPVSYDQGANMAKQIGAATYIECSALQSENSVRDIFHVAT 199


>2NTY-C nrPDB
          Length = 180

 Score =  164 bits (415), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 77/176 (43%), Positives = 110/176 (62%), Gaps = 2/176 (1%)

Query: 16  RSVKVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMVNLQVKGKPVHLHIWDTAGQ 75
           R +K V VGDG  GKT +L+ +    FP  Y PTVF+ +  N+ V G  V+L +WDTAGQ
Sbjct: 5   RFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGNTVNLGLWDTAGQ 64

Query: 76  DDYDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVNHFCKKVPIIVVGCKTDLCK 135
           +DY+RLRPL Y  A V +L F + S  S++N+  +W PE+ H+   VPII+VG K DL  
Sbjct: 65  EDYNRLRPLSYRGADVFILAFSLISKASYENVAKKWIPELRHYAPGVPIILVGTKLDLRD 124

Query: 136 DKSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNVHAVFQEAAEVAL 191
           DK     +   G  P+T ++G+E+ + +G+  Y+ECS++   NV AVF  A +V L
Sbjct: 125 DKQFF--IDHPGAVPITTNQGEELKKLIGSPIYIECSSKTQQNVKAVFDAAIKVVL 178


>3BWD-D nrPDB
          Length = 182

 Score =  164 bits (415), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 78/176 (44%), Positives = 109/176 (61%), Gaps = 2/176 (1%)

Query: 16  RSVKVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMVNLQVKGKPVHLHIWDTAGQ 75
           R +K V VGDG  GKT LL+ +    FP  Y PTVF+ +  N+ V G  V+L +WDTAGQ
Sbjct: 7   RFIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVNGATVNLGLWDTAGQ 66

Query: 76  DDYDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVNHFCKKVPIIVVGCKTDLCK 135
           +DY+RLRPL Y  A V +L F + S  S++N+  +W PE+ H+   VPI++VG K DL  
Sbjct: 67  EDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGVPIVLVGTKLDLRD 126

Query: 136 DKSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNVHAVFQEAAEVAL 191
           DK     +   G  P+T  +G+E+ + +GA AY+ECS++  +NV  VF  A  V L
Sbjct: 127 DKQFF--IDHPGAVPITTVQGEELKKLIGAPAYIECSSKSQENVKGVFDAAIRVVL 180


>2J0V-A nrPDB
          Length = 212

 Score =  159 bits (402), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 74/174 (42%), Positives = 107/174 (61%), Gaps = 4/174 (2%)

Query: 18  VKVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMVNLQVKGKPVHLHIWDTAGQDD 77
           +K V VGDG  GKT +L+ +    FP  Y PTVF+ +  N+ V G+ V+L +WDTAGQ+D
Sbjct: 10  IKCVTVGDGAVGKTCMLICYTSNKFPTDYIPTVFDNFSANVAVDGQIVNLGLWDTAGQED 69

Query: 78  YDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVNHFCKKVPIIVVGCKTDLCKDK 137
           Y RLRPL Y  A + +L F + S  S++N+  +W PE+  F   VPI++VG K DL  DK
Sbjct: 70  YSRLRPLSYRGADIFVLAFSLISKASYENVLKKWMPELRRFAPNVPIVLVGTKLDLRDDK 129

Query: 138 SLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNVHAVFQEAAEVAL 191
             +     +    +T  +G+E+ + +GA AY+ECS++   NV AVF  A +V L
Sbjct: 130 GYLA----DHTNVITSTQGEELRKQIGAAAYIECSSKTQQNVKAVFDTAIKVVL 179


>3REG-A nrPDB
          Length = 194

 Score =  159 bits (401), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 73/181 (40%), Positives = 113/181 (62%), Gaps = 10/181 (5%)

Query: 14  GVRSVKVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMVNLQVKGKPVHLHIWDTA 73
           G +++K+V+VGDG  GKT LL+ F+ G  P +Y PTVFE +   ++ K +   LH+WDTA
Sbjct: 20  GKKALKIVVVGDGAVGKTCLLLAFSKGEIPTAYVPTVFENFSHVMKYKNEEFILHLWDTA 79

Query: 74  GQDDYDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVNHFCKKVPIIVVGCKTDL 133
           GQ++YDRLRPL Y D+ V+LLCF V +  SFDNI  +W PE+ H+      ++VG K D 
Sbjct: 80  GQEEYDRLRPLSYADSDVVLLCFAVNNRTSFDNISTKWEPEIKHYIDTAKTVLVGLKVD- 138

Query: 134 CKDKSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNVHAVFQEAAEVALSS 193
                    LR++G + VT   G ++ + +G VAY+E S+     ++ VF+++ +   S+
Sbjct: 139 ---------LRKDGSDDVTKQEGDDLCQKLGCVAYIEASSVAKIGLNEVFEKSVDCIFSN 189

Query: 194 R 194
           +
Sbjct: 190 K 190


>2Q3H-A nrPDB
          Length = 201

 Score =  158 bits (399), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 72/169 (42%), Positives = 105/169 (62%)

Query: 18  VKVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMVNLQVKGKPVHLHIWDTAGQDD 77
           VK VLVGDG  GKTSL++ +    +P  Y PT F+ +   + V G+PV L + DTAGQD+
Sbjct: 21  VKCVLVGDGAVGKTSLVVSYTTNGYPTEYIPTAFDNFSAVVSVDGRPVRLQLCDTAGQDE 80

Query: 78  YDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVNHFCKKVPIIVVGCKTDLCKDK 137
           +D+LRPL Y +  + LLCF V SP+SF N+  +W PE+   C K PII+VG ++DL +D 
Sbjct: 81  FDKLRPLCYTNTDIFLLCFSVVSPSSFQNVSEKWVPEIRCHCPKAPIILVGTQSDLREDV 140

Query: 138 SLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNVHAVFQEA 186
            ++ +L +   +PV     + +A  + A +Y+ECSA    N+  VF  A
Sbjct: 141 KVLIELDKCKEKPVPEEAAKLLAEEIKAASYIECSALTQKNLKEVFDAA 189


>2REX-B nrPDB
          Length = 197

 Score =  157 bits (397), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 73/186 (39%), Positives = 114/186 (61%), Gaps = 1/186 (0%)

Query: 8   GEEAPPGVRSVKVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMVNLQVKGKPVHL 67
           G    P V   K+VLVGD  CGKT++L V A   +PE+Y PTVFE Y   L+ + + V L
Sbjct: 1   GRAPQPVVARCKLVLVGDVQCGKTAMLQVLAKDCYPETYVPTVFENYTACLETEEQRVEL 60

Query: 68  HIWDTAGQDDYDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVNHFCKKVPIIVV 127
            +WDT+G   YD +RPL Y D+  +LLCFD++ P + D+   +W  E+  +C    ++++
Sbjct: 61  SLWDTSGSPYYDNVRPLCYSDSDAVLLCFDISRPETVDSALKKWRTEILDYCPSTRVLLI 120

Query: 128 GCKTDLCKDKSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHD-NVHAVFQEA 186
           GCKTDL  D S + +L      P++Y +G  +A+ +GA  YLE SA   + ++H++F+ A
Sbjct: 121 GCKTDLRTDLSTLMELSHQKQAPISYEQGCAIAKQLGAEIYLEGSAFTSEKSIHSIFRTA 180

Query: 187 AEVALS 192
           + + L+
Sbjct: 181 SMLCLN 186


>4U5X-A nrPDB
          Length = 178

 Score =  155 bits (393), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 73/176 (41%), Positives = 110/176 (62%), Gaps = 2/176 (1%)

Query: 16  RSVKVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMVNLQVKGKPVHLHIWDTAGQ 75
           R +K V VGDG  GKT +L+ +    FP  Y PTVF+ +  N+ V G  V+L +WDTAG 
Sbjct: 4   RFIKCVTVGDGAVGKTCMLICYTSNKFPTDYIPTVFDNFSANVSVDGSVVNLGLWDTAGL 63

Query: 76  DDYDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVNHFCKKVPIIVVGCKTDLCK 135
           +DY RLRPL Y  A V +L F + S  S++N+  +W PE+  F   VP+++VG K DL +
Sbjct: 64  EDYSRLRPLSYRGADVFILSFSLISRASYENVQKKWMPELRRFAPGVPVVLVGTKLDLRE 123

Query: 136 DKSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNVHAVFQEAAEVAL 191
           D++ +     + +  +T  +G+E+ + +GAVAY+ECS++   N+ AVF  A +V L
Sbjct: 124 DRAYLADHPASSI--ITTEQGEELRKLIGAVAYIECSSKTQRNIKAVFDTAIKVVL 177


>5HZH-A nrPDB
          Length = 332

 Score =  153 bits (387), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 69/130 (53%), Positives = 85/130 (65%)

Query: 62  GKPVHLHIWDTAGQDDYDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVNHFCKK 121
           GKPV+L +WDTAG +DYDRLRPL YP   V L+CF + SP SF+N+  +WYPEV H C  
Sbjct: 200 GKPVNLGLWDTAGLEDYDRLRPLSYPQTDVFLICFSLVSPASFENVRAKWYPEVRHHCPN 259

Query: 122 VPIIVVGCKTDLCKDKSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNVHA 181
            PII+VG K DL  DK  + KL+   L P+TY +G  MA+ +GAV YLECSA     +  
Sbjct: 260 TPIILVGTKLDLRDDKDTIEKLKEKKLTPITYPQGLAMAKEIGAVKYLECSALTQRGLKT 319

Query: 182 VFQEAAEVAL 191
           VF EA    L
Sbjct: 320 VFDEAIRAVL 329



 Score = 53.1 bits (126), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 23/48 (47%), Positives = 32/48 (66%)

Query: 15 VRSVKVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMVNLQVKG 62
          ++++K V+VGDG  GKT LL+ +   AFP  Y PTVF+ Y  N+ V G
Sbjct: 4  MQAIKCVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDG 51


>6O62-A nrPDB
          Length = 184

 Score = 99.4 bits (246), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 58/173 (33%), Positives = 97/173 (56%), Gaps = 14/173 (8%)

Query: 18  VKVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMV-NLQVKGKPVHLHIWDTAGQD 76
           +K++LVGD G GK+ LL+ F +  F  S+  T+   + +  ++ KGK + L +WDTAGQ+
Sbjct: 15  MKLLLVGDSGVGKSCLLLRFVEDKFNPSFITTIGIDFKIRTIESKGKRIKLQVWDTAGQE 74

Query: 77  DYDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVNHFCKKVPIIVVGCKTDLCKD 136
            +  +   +Y  A  ++L +DVT   SF+N+ N +     H  +   I +VG K   C D
Sbjct: 75  RFRTITTAYYRGAMGIVLIYDVTDSRSFENVENWFQTVTQHANEDAQIFLVGNK---CDD 131

Query: 137 KSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNVHAVFQEAAEV 189
           +  VN+        V+  +GQE+A  +  V +LE SA+ ++NV ++F E A +
Sbjct: 132 E--VNR-------QVSKEQGQELAAKLN-VPFLEASAKSNENVDSIFYELASI 174


>2WWX-A nrPDB
          Length = 175

 Score = 98.6 bits (244), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 59/174 (33%), Positives = 95/174 (54%), Gaps = 17/174 (9%)

Query: 19  KVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMV-NLQVKGKPVHLHIWDTAGQDD 77
           K++L+GD G GK+ LL+ FAD  + ESY  T+   + +  +++ GK + L IWDTAGQ+ 
Sbjct: 10  KLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQER 69

Query: 78  YDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVNHFC-KKVPIIVVGCKTDLCKD 136
           +  +   +Y  A  +++ +DVT   SF+N+  +W  E++ +  + V  ++VG K DL   
Sbjct: 70  FRTITSSYYRGAHGIIVVYDVTDQESFNNV-KQWLQEIDRYASENVNKLLVGIKCDLTTK 128

Query: 137 KSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNVHAVFQE-AAEV 189
           K             V Y   +E A S+G + +LE SA+   NV   F   AAE+
Sbjct: 129 K------------VVDYTTAKEFADSLG-IPFLETSAKNATNVEQSFMTMAAEI 169


>3L0I-B nrPDB
          Length = 199

 Score = 98.6 bits (244), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 59/174 (33%), Positives = 95/174 (54%), Gaps = 17/174 (9%)

Query: 19  KVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMV-NLQVKGKPVHLHIWDTAGQDD 77
           K++L+GD G GK+ LL+ FAD  + ESY  T+   + +  +++ GK + L IWDTAGQ+ 
Sbjct: 35  KLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQER 94

Query: 78  YDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVNHFC-KKVPIIVVGCKTDLCKD 136
           +  +   +Y  A  +++ +DVT   SF+N+  +W  E++ +  + V  ++VG K DL   
Sbjct: 95  FRTITSSYYRGAHGIIVVYDVTDQESFNNV-KQWLQEIDRYASENVNKLLVGNKCDLTTK 153

Query: 137 KSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNVHAVFQE-AAEV 189
           K             V Y   +E A S+G + +LE SA+   NV   F   AAE+
Sbjct: 154 K------------VVDYTTAKEFADSLG-IPFLETSAKNATNVEQSFMTMAAEI 194


>2RHD-A nrPDB
          Length = 175

 Score = 95.9 bits (237), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 56/171 (32%), Positives = 93/171 (54%), Gaps = 16/171 (9%)

Query: 19  KVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMV-NLQVKGKPVHLHIWDTAGQDD 77
           K++L+GD G GK+ LL+ FAD  + +SY  T+   + +  + ++ K V L IWDTAGQ+ 
Sbjct: 11  KLLLIGDSGVGKSCLLLRFADDTYTDSYISTIGVDFKIRTISLENKTVKLQIWDTAGQER 70

Query: 78  YDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVNHFC-KKVPIIVVGCKTDLCKD 136
           +  +   +Y  A  +++ +DVT  +SFDN+  +W  E++ +  + V  ++VG K DL   
Sbjct: 71  FRTITSSYYRGAHGIIIVYDVTDRDSFDNV-KQWIQEIDRYAMENVNKLLVGNKCDLVSK 129

Query: 137 KSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNVHAVFQEAA 187
           +             VT   G+E+A S G + ++E SA+   NV   F   A
Sbjct: 130 R------------VVTSDEGRELADSHG-IKFIETSAKNAYNVEQAFHTMA 167


>3CPH-A nrPDB
          Length = 213

 Score = 95.5 bits (236), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 52/168 (30%), Positives = 93/168 (55%), Gaps = 17/168 (10%)

Query: 18  VKVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMV-NLQVKGKPVHLHIWDTAGQD 76
           +K++L+GD G GK+ LL+ F +  F  S+  T+   + +  + + GK V L +WDTAGQ+
Sbjct: 21  MKILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGKKVKLQLWDTAGQE 80

Query: 77  DYDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVN-HFCKKVPIIVVGCKTDLCK 135
            +  +   +Y  A  ++L +DVT   +F NI  +W+  VN H   +  +++VG K+D+  
Sbjct: 81  RFRTITTAYYRGAMGIILVYDVTDERTFTNI-KQWFKTVNEHANDEAQLLLVGNKSDMET 139

Query: 136 DKSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNVHAVF 183
                          VT  +G+ +A+ +G + ++E SA+  DNV+ +F
Sbjct: 140 -------------RVVTADQGEALAKELG-IPFIESSAKNDDNVNEIF 173


>1EK0-A nrPDB
          Length = 170

 Score = 94.7 bits (234), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 54/171 (31%), Positives = 89/171 (52%), Gaps = 13/171 (7%)

Query: 15  VRSVKVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMVN-LQVKGKPVHLHIWDTA 73
           V S+K+VL+G+   GK+S+++ F    F E+  PT+   ++   + +    V   IWDTA
Sbjct: 1   VTSIKLVLLGEAAVGKSSIVLRFVSNDFAENKEPTIGAAFLTQRVTINEHTVKFEIWDTA 60

Query: 74  GQDDYDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVN-HFCKKVPIIVVGCKTD 132
           GQ+ +  L P++Y +A   L+ +DVT P SF      W  E++    K + I +VG K D
Sbjct: 61  GQERFASLAPMYYRNAQAALVVYDVTKPQSFIKA-RHWVKELHEQASKDIIIALVGNKID 119

Query: 133 LCKDKSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNVHAVF 183
           +         L+  G   V    G+++A   G + + E SA+  +NV+ VF
Sbjct: 120 M---------LQEGGERKVAREEGEKLAEEKG-LLFFETSAKTGENVNDVF 160


>2OCY-C nrPDB
          Length = 170

 Score = 94.7 bits (234), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 52/168 (30%), Positives = 93/168 (55%), Gaps = 17/168 (10%)

Query: 18  VKVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMV-NLQVKGKPVHLHIWDTAGQD 76
           +K++L+GD G GK+ LL+ F +  F  S+  T+   + +  + + GK V L +WDTAGQ+
Sbjct: 4   MKILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGKKVKLQLWDTAGQE 63

Query: 77  DYDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVN-HFCKKVPIIVVGCKTDLCK 135
            +  +   +Y  A  ++L +DVT   +F NI  +W+  VN H   +  +++VG K+D+  
Sbjct: 64  RFRTITTAYYRGAMGIILVYDVTDERTFTNI-KQWFKTVNEHANDEAQLLLVGNKSDM-- 120

Query: 136 DKSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNVHAVF 183
                          VT  +G+ +A+ +G + ++E SA+  DNV+ +F
Sbjct: 121 -----------ETRVVTADQGEALAKELG-IPFIESSAKNDDNVNEIF 156


>5SZH-B nrPDB
          Length = 203

 Score = 94.7 bits (234), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 57/174 (32%), Positives = 95/174 (54%), Gaps = 17/174 (9%)

Query: 19  KVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMV-NLQVKGKPVHLHIWDTAGQDD 77
           K++L+GD G GK+ LL+ FAD  + ESY  T+   + +  +++ GK + L IWDTAGQ+ 
Sbjct: 12  KLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQER 71

Query: 78  YDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVNHFC-KKVPIIVVGCKTDLCKD 136
           +  +   +Y  A  +++ +DVT   S+ N+  +W  E++ +  + V  ++VG K+DL   
Sbjct: 72  FRTITSSYYRGAHGIIVVYDVTDQESYANV-KQWLQEIDRYASENVNKLLVGNKSDLTTK 130

Query: 137 KSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNVHAVFQE-AAEV 189
           K + N               +E A S+G + +LE SA+   NV   F   AAE+
Sbjct: 131 KVVDNTT------------AKEFADSLG-IPFLETSAKNATNVEQAFMTMAAEI 171


>2EW1-A nrPDB
          Length = 201

 Score = 94.4 bits (233), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 55/171 (32%), Positives = 88/171 (51%), Gaps = 16/171 (9%)

Query: 19  KVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMV-NLQVKGKPVHLHIWDTAGQDD 77
           K+VL+G+ G GKT L+  F  G FP     T+   +M+  +++ G+ V L IWDTAGQ+ 
Sbjct: 28  KIVLIGNAGVGKTCLVRRFTQGLFPPGQGATIGVDFMIKTVEINGEKVKLQIWDTAGQER 87

Query: 78  YDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVNHFC-KKVPIIVVGCKTDLCKD 136
           +  +   +Y  A+ L+L +D+T   SF      W  E+  +   KV  ++VG K DL + 
Sbjct: 88  FRSITQSYYRSANALILTYDITCEESF-RCLPEWLREIEQYASNKVITVLVGNKIDLAER 146

Query: 137 KSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNVHAVFQEAA 187
           +             V+  R +E + +   + YLE SA+  DNV  +F + A
Sbjct: 147 RE------------VSQQRAEEFSEA-QDMYYLETSAKESDNVEKLFLDLA 184


>4LHX-A nrPDB
          Length = 186

 Score = 92.8 bits (229), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 52/167 (31%), Positives = 90/167 (53%), Gaps = 16/167 (9%)

Query: 19  KVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMV-NLQVKGKPVHLHIWDTAGQDD 77
           K++L+GD G GKT +L  F++ AF  ++  T+   + +  +++ GK + L IWDTAGQ+ 
Sbjct: 12  KLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKRIKLQIWDTAGQER 71

Query: 78  YDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEV-NHFCKKVPIIVVGCKTDLCKD 136
           +  +   +Y  A  ++L +D+T+  SFDNI N W   +  H    V  +++G K D+   
Sbjct: 72  FRTITTAYYRGAMGIMLVYDITNEKSFDNIRN-WIRNIEEHASADVEKMILGNKCDV--- 127

Query: 137 KSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNVHAVF 183
                    N    V+  RG+++A   G + ++E SA+ + NV   F
Sbjct: 128 ---------NDKRQVSKERGEKLALDYG-IKFMETSAKANINVENAF 164


>5SZI-A nrPDB
          Length = 209

 Score = 92.8 bits (229), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 52/167 (31%), Positives = 90/167 (53%), Gaps = 16/167 (9%)

Query: 19  KVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMV-NLQVKGKPVHLHIWDTAGQDD 77
           K++L+GD G GKT +L  F++ AF  ++  T+   + +  +++ GK + L IWDTAGQ+ 
Sbjct: 12  KLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKRIKLQIWDTAGQER 71

Query: 78  YDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEV-NHFCKKVPIIVVGCKTDLCKD 136
           +  +   +Y  A  ++L +D+T+  SFDNI N W   +  H    V  +++G K D+   
Sbjct: 72  FRTITTAYYRGAMGIMLVYDITNEKSFDNIRN-WIRNIEEHASADVEKMILGNKCDV--- 127

Query: 137 KSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNVHAVF 183
                    N    V+  RG+++A   G + ++E SA+ + NV   F
Sbjct: 128 ---------NDKRQVSKERGEKLALDYG-IKFMETSAKANINVENAF 164


>5LPN-A nrPDB
          Length = 177

 Score = 92.4 bits (228), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 55/175 (31%), Positives = 99/175 (56%), Gaps = 16/175 (9%)

Query: 19  KVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMVN-LQVKGKPVHLHIWDTAGQDD 77
           K++L+GD G GKT +L  F+D AF  ++  T+   + +  ++++GK + L IWDTAGQ+ 
Sbjct: 13  KLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQIWDTAGQER 72

Query: 78  YDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVN-HFCKKVPIIVVGCKTDLCKD 136
           +  +   +Y  A  ++L +D+T+  SF+NI ++W   ++ H  + V  +++G K D+  D
Sbjct: 73  FHTITTSYYRGAMGIMLVYDITNGKSFENI-SKWLRNIDEHANEDVERMLLGNKCDM-DD 130

Query: 137 KSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNVHAVFQEAAEVAL 191
           K +V K            +G+++AR  G + + E SA+ + N+   F   AE  L
Sbjct: 131 KRVVPK-----------GKGEQIAREHG-IRFFETSAKANINIEKAFLTLAEDIL 173


>6IF2-B nrPDB
          Length = 186

 Score = 92.0 bits (227), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 57/184 (30%), Positives = 93/184 (50%), Gaps = 15/184 (8%)

Query: 19  KVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMV-NLQVKGKPVHLHIWDTAGQDD 77
           K++++GD G GK+SLL+ FAD  F  SY  T+   + +  +++ G+ V L IWDTAG + 
Sbjct: 16  KLLIIGDSGVGKSSLLLRFADNTFSGSYITTIGVDFKIRTVEINGEKVKLQIWDTAGLER 75

Query: 78  YDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVNHFCKKVPIIVVGCKTDLCKDK 137
           +  +   +Y     +++ +DVTS  SF N+  RW  E+N  C  V  I+VG K D  + K
Sbjct: 76  FRTITSTYYRGTHGVIVVYDVTSAESFVNV-KRWLHEINQNCDDVCRILVGNKNDDPERK 134

Query: 138 SLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNVHAVFQEAAEVALSSRGRN 197
                        V      + A  +G +   E SA+ + NV  +F    E+ L ++  N
Sbjct: 135 ------------VVETEDAYKFAGQMG-IQLFETSAKENVNVEEMFNCITELVLRAKKDN 181

Query: 198 FWRR 201
             ++
Sbjct: 182 LAKQ 185


>5SZJ-A nrPDB
          Length = 202

 Score = 92.0 bits (227), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 55/175 (31%), Positives = 99/175 (56%), Gaps = 16/175 (9%)

Query: 19  KVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMVN-LQVKGKPVHLHIWDTAGQDD 77
           K++L+GD G GKT +L  F+D AF  ++  T+   + +  ++++GK + L IWDTAGQ+ 
Sbjct: 13  KLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQIWDTAGQER 72

Query: 78  YDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVN-HFCKKVPIIVVGCKTDLCKD 136
           +  +   +Y  A  ++L +D+T+  SF+NI ++W   ++ H  + V  +++G K D+  D
Sbjct: 73  FHTITTSYYRGAMGIMLVYDITNGKSFENI-SKWLRNIDEHANEDVERMLLGNKCDM-DD 130

Query: 137 KSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNVHAVFQEAAEVAL 191
           K +V K            +G+++AR  G + + E SA+ + N+   F   AE  L
Sbjct: 131 KRVVPK-----------GKGEQIAREHG-IRFFETSAKANINIEKAFLTLAEDIL 173


>2G6B-A nrPDB
          Length = 180

 Score = 91.7 bits (226), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 61/175 (34%), Positives = 93/175 (53%), Gaps = 17/175 (9%)

Query: 17  SVKVVLVGDGGCGKTSLLMVFADGAF-PESYTPTVFERYMVN-LQVKGKPVHLHIWDTAG 74
           + KV+LVGD G GKT LL+ F DGAF   ++  TV   +    L V G  V L +WDTAG
Sbjct: 10  AFKVMLVGDSGVGKTCLLVRFKDGAFLAGTFISTVGIDFRNKVLDVDGVKVKLQMWDTAG 69

Query: 75  QDDYDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVNHFCK-KVPIIVVGCKTDL 133
           Q+ +  +   +Y DA  LLL +DVT+  SFDNI   W  E++ + +  V ++++G K D 
Sbjct: 70  QERFRSVTHAYYRDAHALLLLYDVTNKASFDNI-QAWLTEIHEYAQHDVALMLLGNKVDS 128

Query: 134 CKDKSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNVHAVFQEAAE 188
             ++             V    G+++A+  G + ++E SA+   NV   F   A+
Sbjct: 129 AHER------------VVKREDGEKLAKEYG-LPFMETSAKTGLNVDLAFTAIAK 170


>4M8N-E nrPDB
          Length = 199

 Score = 90.5 bits (223), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 54/172 (31%), Positives = 91/172 (52%), Gaps = 13/172 (7%)

Query: 13  PGVRSVKVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMVNLQVKGKPVHLHIWDT 72
           P +R  K+V++G GG GK++L + F  G F E Y PT+ + Y   ++V  +   L I DT
Sbjct: 2   PHMREYKLVVLGSGGVGKSALTVQFVQGIFVEKYDPTIEDSYRKQVEVDAQQCMLEILDT 61

Query: 73  AGQDDYDRLRPLFYPDASVLLLCFDVTSPNSFDNIFN-RWYPEVNHFCKKVPIIVVGCKT 131
           AG + +  +R L+  +     L + +T+ ++F+++ + R           VP+I+VG K 
Sbjct: 62  AGTEQFTAMRDLYMKNGQGFALVYSITAQSTFNDLQDLREQILRVKDTDDVPMILVGNKC 121

Query: 132 DLCKDKSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNVHAVF 183
           DL +D+ +V K            +GQ +AR     A+LE SA+   NV+ +F
Sbjct: 122 DL-EDERVVGK-----------EQGQNLARQWNNCAFLESSAKSKINVNEIF 161


>1YZU-A nrPDB
          Length = 170

 Score = 90.1 bits (222), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 54/169 (31%), Positives = 91/169 (53%), Gaps = 16/169 (9%)

Query: 17  SVKVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMVN-LQVKGKPVHLHIWDTAGQ 75
           S KVVL+G+G  GKTSL++ + +  F + +  T+   ++   L + GK V+L IWDTAGQ
Sbjct: 6   SFKVVLLGEGCVGKTSLVLRYCENKFNDKHITTLQASFLTKKLNIGGKRVNLAIWDTAGQ 65

Query: 76  DDYDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVNHFC-KKVPIIVVGCKTDLC 134
           + +  L P++Y D++  +L +D+T  +SF  + N W  E+      ++ + +VG K DL 
Sbjct: 66  ERFHALGPIYYRDSNGAILVYDITDEDSFQKVKN-WVKELRKMLGNEICLCIVGNKIDLE 124

Query: 135 KDKSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNVHAVF 183
           K++             V+    +  A SVGA  Y   SA+ +  +  +F
Sbjct: 125 KER------------HVSIQEAESYAESVGAKHY-HTSAKQNKGIEELF 160


>2IL1-A nrPDB
          Length = 192

 Score = 89.7 bits (221), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 47/173 (27%), Positives = 93/173 (53%), Gaps = 15/173 (8%)

Query: 13  PGVRSVKVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMVN-LQVKGKPVHLHIWD 71
           P    ++V+++G  G GKTSL+  F D  F E+   TV   + +  ++++GK + L IWD
Sbjct: 22  PADFKLQVIIIGSRGVGKTSLMERFTDDTFCEACKSTVGVDFKIKTVELRGKKIRLQIWD 81

Query: 72  TAGQDDYDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVNHFCKK-VPIIVVGCK 130
           TAGQ+ ++ +   +Y  A  ++L +D+T   +FD++  +W   ++ +  +   +++VG K
Sbjct: 82  TAGQERFNSITSAYYRSAKGIILVYDITKKETFDDL-PKWMKMIDKYASEDAELLLVGNK 140

Query: 131 TDLCKDKSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNVHAVF 183
            D   D+             +T  +G++ A+ +  + + E SA+ + NV  +F
Sbjct: 141 LDCETDRE------------ITRQQGEKFAQQITGMRFCEASAKDNFNVDEIF 181


>5LDD-C nrPDB
          Length = 207

 Score = 88.6 bits (218), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 56/180 (31%), Positives = 87/180 (48%), Gaps = 18/180 (10%)

Query: 18  VKVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMV-NLQVKGKPVHLHIWDTAGQD 76
           +KV+++GD G GKTSL+  + +  F  SY  T+   ++   + V  + V + +WDTAGQ+
Sbjct: 11  LKVIILGDSGVGKTSLMNQYVNKKFSASYKATIGADFLTREVMVDDRQVTMQLWDTAGQE 70

Query: 77  DYDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVNHFC-----KKVPIIVVGCKT 131
            +  L   FY  A   +L FDV +  SFD + + W  E          +  P +V+G K 
Sbjct: 71  RFQSLGVAFYRGADCCVLVFDVNNAKSFDAL-DSWRDEFLIQASPRDPENFPFVVLGIKI 129

Query: 132 DLCKDKSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNVHAVFQEAAEVAL 191
           D+ + K +           ++  R Q   +S G + Y E SA+   NV   FQ  A  AL
Sbjct: 130 DVEESKRV-----------ISTKRAQTFCQSKGGIPYFETSAKEAINVEEAFQVIARNAL 178


>2OCB-A nrPDB
          Length = 180

 Score = 88.2 bits (217), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 62/181 (34%), Positives = 87/181 (48%), Gaps = 20/181 (11%)

Query: 18  VKVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYM-VNLQVKGKPVHLHIWDTAGQD 76
           +KV+L+GDGG GK+SL+  +    F      T+   ++  +L+V G+ V L IWDTAGQ+
Sbjct: 8   LKVILLGDGGVGKSSLMNRYVTNKFDSQAFHTIGVEFLNRDLEVDGRFVTLQIWDTAGQE 67

Query: 77  DYDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVNHFC-----KKVPIIVVGCKT 131
            +  LR  FY  A   LL F V    SF+N+ N W  E  ++      +  P +V+G K 
Sbjct: 68  RFKSLRTPFYRGADCCLLTFSVDDRQSFENLGN-WQKEFIYYADVKDPEHFPFVVLGNK- 125

Query: 132 DLCKDKSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNVHAVFQEAAEVAL 191
                   V+K  R     VT    Q      G   YLE SA+   NV   F+EA    L
Sbjct: 126 --------VDKEDRQ----VTTEEAQTWCMENGDYPYLETSAKDDTNVTVAFEEAVRQVL 173

Query: 192 S 192
           +
Sbjct: 174 A 174


>1WMS-A nrPDB
          Length = 177

 Score = 88.2 bits (217), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 57/182 (31%), Positives = 85/182 (46%), Gaps = 20/182 (10%)

Query: 19  KVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYM-VNLQVKGKPVHLHIWDTAGQDD 77
           KV+L+GDGG GK+SL+  +    F      T+   ++  +L+V G  V + IWDTAGQ+ 
Sbjct: 9   KVILLGDGGVGKSSLMNRYVTNKFDTQLFHTIGVEFLNKDLEVDGHFVTMQIWDTAGQER 68

Query: 78  YDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVNHFC-----KKVPIIVVGCKTD 132
           +  LR  FY  +   LL F V    SF N+ N W  E  ++      +  P +++G K D
Sbjct: 69  FRSLRTPFYRGSDCCLLTFSVDDSQSFQNLSN-WKKEFIYYADVKEPESFPFVILGNKID 127

Query: 133 LCKDKSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNVHAVFQEAAEVALS 192
           + +               V+    Q   R  G   Y E SA+   NV A F+EA    L+
Sbjct: 128 ISE-------------RQVSTEEAQAWCRDNGDYPYFETSAKDATNVAAAFEEAVRRVLA 174

Query: 193 SR 194
           + 
Sbjct: 175 TE 176


>1X3S-A nrPDB
          Length = 195

 Score = 87.4 bits (215), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 58/191 (30%), Positives = 95/191 (49%), Gaps = 20/191 (10%)

Query: 17  SVKVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMV-NLQVKGKPVHLHIWDTAGQ 75
           ++K++++G+ G GK+SLL+ F D  F      T+   + V  + V G    L IWDTAGQ
Sbjct: 15  TLKILIIGESGVGKSSLLLRFTDDTFDPELAATIGVDFKVKTISVDGNKAKLAIWDTAGQ 74

Query: 76  DDYDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVNHFCKKVPII--VVGCKTDL 133
           + +  L P +Y  A  ++L +DVT  ++F  + N W  E+  +C +  I+  +VG K D 
Sbjct: 75  ERFRTLTPSYYRGAQGVILVYDVTRRDTFVKLDN-WLNELETYCTRNDIVNMLVGNKID- 132

Query: 134 CKDKSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNVHAVFQEAAEVALSS 193
            K+   V+  R  GL+    H          ++ ++E SA+  D V   F+E  E  + +
Sbjct: 133 -KENREVD--RNEGLKFARKH----------SMLFIEASAKTCDGVQCAFEELVEKIIQT 179

Query: 194 RGRNFWRRITQ 204
            G   W    Q
Sbjct: 180 PG--LWESENQ 188


>4QXA-A nrPDB
          Length = 208

 Score = 87.0 bits (214), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 58/185 (31%), Positives = 89/185 (48%), Gaps = 20/185 (10%)

Query: 19  KVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYM-VNLQVKGKPVHLHIWDTAGQDD 77
           K++L+GDGG GK+SL+  +    F      T+   ++  +L+V G  V + IWDTAG + 
Sbjct: 10  KIILLGDGGVGKSSLMNRYVTNKFDSQLFHTIGVEFLNKDLEVDGHFVTMQIWDTAGLER 69

Query: 78  YDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVNHFC-----KKVPIIVVGCKTD 132
           +  LR  FY  +   LL F V    SF N+ N W  E  ++      +  P +++G KTD
Sbjct: 70  FRSLRTPFYRGSDCCLLTFSVDDSQSFQNLSN-WKKEFIYYADVKEPESFPFVILGNKTD 128

Query: 133 LCKDKSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNVHAVFQEAAEVALS 192
           +        K R+     V+    Q   +  G   Y E SA+   NV A F+EA    L+
Sbjct: 129 I--------KERQ-----VSTEEAQAWCKDNGDYPYFETSAKDSTNVAAAFEEAVRRILA 175

Query: 193 SRGRN 197
           +  R+
Sbjct: 176 TEDRS 180


>2N1B-A nrPDB
          Length = 261

 Score = 86.7 bits (213), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 56/185 (30%), Positives = 93/185 (50%), Gaps = 19/185 (10%)

Query: 2   TAAQAAGEEAPPGVRSV--KVVLVGDGGCGKTSLLMVFADGAFPESYTPTV-FERYMVNL 58
           ++  AAG  A  G   V  K+VLVGDGG GKT+ +     G F + Y  T+  E + +  
Sbjct: 34  SSRSAAGTMAAQGEPQVQFKLVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVF 93

Query: 59  QVKGKPVHLHIWDTAGQDDYDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVNHF 118
                P+  ++WDTAGQ+ +  LR  +Y  A   ++ FDVTS  ++ N+ N W+ ++   
Sbjct: 94  HTNRGPIKFNVWDTAGQEKFGGLRDGYYIQAQCAIIMFDVTSRVTYKNVPN-WHRDLVRV 152

Query: 119 CKKVPIIVVGCKTDLCKDKSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDN 178
           C+ +PI++ G K D+        K R+   + + +HR + +        Y + SA+ + N
Sbjct: 153 CENIPIVLCGNKVDI--------KDRKVKAKSIVFHRKKNL-------QYYDISAKSNYN 197

Query: 179 VHAVF 183
               F
Sbjct: 198 FEKPF 202


>2A5J-A nrPDB
          Length = 191

 Score = 86.7 bits (213), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 59/198 (29%), Positives = 95/198 (47%), Gaps = 26/198 (13%)

Query: 12  PPGVRSVKVVLVGDGGCGKTSLLMVFADGAFPESYTPTV---FERYMVNLQVKGKPVHLH 68
           P G    K +++GD G GK+ LL+ F D  F   +  T+   F   MVN  + GK + L 
Sbjct: 16  PRGSYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVN--IDGKQIKLQ 73

Query: 69  IWDTAGQDDYDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVNHFCKKVPIIVVG 128
           IWDTAGQ+ +  +   +Y  A+  LL +D+T   +F+++ +       H    + I+++G
Sbjct: 74  IWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLTSWLEDARQHSSSNMVIMLIG 133

Query: 129 CKTDLCKDKSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNVHAVFQEAAE 188
            K+DL        + RR+    V    G+  AR  G + ++E SA+   NV   F   A 
Sbjct: 134 NKSDL--------ESRRD----VKREEGEAFAREHGLI-FMETSAKTACNVEEAFINTA- 179

Query: 189 VALSSRGRNFWRRITQGF 206
                  +  +R+I QG 
Sbjct: 180 -------KEIYRKIQQGL 190


>2FFQ-A nrPDB
          Length = 171

 Score = 85.5 bits (210), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 51/175 (29%), Positives = 92/175 (52%), Gaps = 16/175 (9%)

Query: 19  KVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMV-NLQVKGKPVHLHIWDTAGQDD 77
           K+V +G+   GKTSL+  F   +F  +Y  T+   ++   + ++ + V L +WDTAGQ+ 
Sbjct: 4   KLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQER 63

Query: 78  YDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEV-NHFCKKVPIIVVGCKTDLCKD 136
           +  L P +  D++V ++ +D+T+ NSF    ++W  +V       V I++VG KTDL   
Sbjct: 64  FRSLIPSYIRDSTVAVVVYDITNLNSFQQT-SKWIDDVRTERGSDVIIMLVGNKTDLADK 122

Query: 137 KSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNVHAVFQEAAEVAL 191
           +             +T   G++ A+ + +V ++E SA+   NV  +F+  A   L
Sbjct: 123 R------------QITIEEGEQRAKEL-SVMFIETSAKTGYNVKQLFRRVASALL 164


>2KE5-A nrPDB
          Length = 174

 Score = 85.5 bits (210), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 56/167 (33%), Positives = 81/167 (48%), Gaps = 15/167 (8%)

Query: 19  KVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMVNLQVKGKPVHLHIWDTAGQDDY 78
           KV++VG GG GK++L + F    F E Y PT  + Y   + + G+ V + I DTAG +DY
Sbjct: 5   KVIMVGSGGVGKSALTLQFMYDEFVEDYEPTKADSYRKKVVLDGEEVQIDILDTAGLEDY 64

Query: 79  DRLRPLFYPDASVLLLCFDVTSPNSFDNI--FNRWYPEVNHFCKKVPIIVVGCKTDLCKD 136
             +R  ++      LL F +T   SF     F      V     K+P++VVG K+DL + 
Sbjct: 65  AAIRDNYFRSGEGFLLVFSITEHESFTATAEFREQILRVKAEEDKIPLLVVGNKSDLEER 124

Query: 137 KSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNVHAVF 183
           + +          PV   R +  A   G V Y+E SA+   NV  VF
Sbjct: 125 RQV----------PVEEARSK--AEEWG-VQYVETSAKTRANVDKVF 158


>4DXA-A nrPDB
          Length = 169

 Score = 85.1 bits (209), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 52/170 (30%), Positives = 89/170 (52%), Gaps = 13/170 (7%)

Query: 15  VRSVKVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMVNLQVKGKPVHLHIWDTAG 74
           +R  K+V++G  G GK++L + F  G F E Y PT+ + Y   ++V  +   L I DTAG
Sbjct: 3   MREYKLVVLGSVGVGKSALTVQFVQGIFVEKYDPTIEDSYRKQVEVDAQQCMLEILDTAG 62

Query: 75  QDDYDRLRPLFYPDASVLLLCFDVTSPNSFDNIFN-RWYPEVNHFCKKVPIIVVGCKTDL 133
            + +  +R L+  +     L + +T+ ++F+++ + R           VP+I+VG K DL
Sbjct: 63  TEQFTAMRDLYMKNGQGFALVYSITAQSTFNDLQDLREQILRVKDTDDVPMILVGNKCDL 122

Query: 134 CKDKSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNVHAVF 183
            +D+ +V K            +GQ +AR     A+LE SA+   NV+ +F
Sbjct: 123 -EDERVVGK-----------EQGQNLARQWNNCAFLESSAKSKINVNEIF 160


>4RKF-A nrPDB
          Length = 190

 Score = 85.1 bits (209), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 51/173 (29%), Positives = 94/173 (54%), Gaps = 16/173 (9%)

Query: 19  KVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMVNLQVK-GKPVHLHIWDTAGQDD 77
           K++++G+   GKTS L  +AD +F  ++  TV   + V    +  K V L IWDTAG + 
Sbjct: 25  KLLIIGNSSVGKTSFLFRYADDSFTSAFVSTVGIDFKVKTVFRHDKRVKLQIWDTAGLER 84

Query: 78  YDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVNHFC-KKVPIIVVGCKTDLCKD 136
           Y  +   +Y  A   +L +DVT+ +SF+++   W  ++  +      +I+VG K D+ +D
Sbjct: 85  YRTITTAYYRGAMGFILMYDVTNEDSFNSV-QDWVTQIKTYSWDNAQVILVGNKCDM-ED 142

Query: 137 KSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNVHAVFQEAAEV 189
           + +           +++ RG+++A  +G V + E SA+ + NV AVF+   ++
Sbjct: 143 QRV-----------ISFERGRQLADQLG-VEFFETSAKENVNVKAVFERLVDI 183


>5XOJ-A nrPDB
          Length = 182

 Score = 84.7 bits (208), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 55/184 (29%), Positives = 93/184 (50%), Gaps = 22/184 (11%)

Query: 1   MTAAQAAGEEAPPGVRSVKVVLVGDGGCGKTSLLMVFADGAFPESYTPTV-FERYMVNLQ 59
           M+A  A GE     V + K+VLVGDGG GKT+ +     G F + Y  T+  E + ++  
Sbjct: 1   MSAPAANGE-----VPTFKLVLVGDGGTGKTTFVKRHLTGEFEKKYIATIGVEVHPLSFY 55

Query: 60  VKGKPVHLHIWDTAGQDDYDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVNHFC 119
                +   +WDTAG + +  LR  +Y +A   ++ FDVTS  ++ N+ N W+ ++   C
Sbjct: 56  TNFGEIKFDVWDTAGLEKFGGLRDGYYINAQCAIIMFDVTSRITYKNVPN-WHRDLVRVC 114

Query: 120 KKVPIIVVGCKTDLCKDKSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNV 179
           + +PI++ G K D+        K R+   + +T+HR + +        Y + SA+ + N 
Sbjct: 115 ENIPIVLCGNKVDV--------KERKVKAKTITFHRKKNL-------QYYDISAKSNYNF 159

Query: 180 HAVF 183
              F
Sbjct: 160 EKPF 163


>1D5C-A nrPDB
          Length = 162

 Score = 84.7 bits (208), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 52/171 (30%), Positives = 87/171 (50%), Gaps = 16/171 (9%)

Query: 19  KVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMVN-LQVKGKPVHLHIWDTAGQDD 77
           K+V +G+   GKTS++  F    F  +Y  T+   ++   L +   PV L +WDTAGQ+ 
Sbjct: 3   KLVFLGEQAVGKTSIITRFMYDTFDNNYQSTIGIDFLSKTLYLDEGPVRLQLWDTAGQER 62

Query: 78  YDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEV-NHFCKKVPIIVVGCKTDLCKD 136
           +  L P +  D++  ++ +D+T+  SF+N   +W  ++ N   K V I +VG KTDL   
Sbjct: 63  FRSLIPSYIRDSAAAIVVYDITNRQSFENT-TKWIQDILNERGKDVIIALVGNKTDL--- 118

Query: 137 KSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNVHAVFQEAA 187
                      L  VTY  G + A+    + + E SA+   N+  +F++ A
Sbjct: 119 ---------GDLRKVTYEEGMQKAQEYNTM-FHETSAKAGHNIKVLFKKTA 159


>3OES-A nrPDB
          Length = 201

 Score = 84.7 bits (208), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 63/186 (33%), Positives = 91/186 (48%), Gaps = 20/186 (10%)

Query: 10  EAPPGVRSVKVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMVNLQVKGKPVHLHI 69
           +  P VR  KVV++G    GKTSL   F +G F E Y PTV   Y   + +     HLH+
Sbjct: 17  QGMPLVRYRKVVILGYRCVGKTSLAHQFVEGEFSEGYDPTVENTYSKIVTLGKDEFHLHL 76

Query: 70  WDTAGQDDYDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVN--HFCKKVPIIVV 127
            DTAGQD+Y  L   F       +L + VTS +SF  +    Y +++  H   +VP+++V
Sbjct: 77  VDTAGQDEYSILPYSFIIGVHGYVLVYSVTSLHSF-QVIESLYQKLHEGHGKTRVPVVLV 135

Query: 128 GCKTDLCKDKSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNVHAVF---- 183
           G K DL  ++             V    G+++A S GA  ++E SAR +     +F    
Sbjct: 136 GNKADLSPERE------------VQAVEGKKLAESWGA-TFMESSARENQLTQGIFTKVI 182

Query: 184 QEAAEV 189
           QE A V
Sbjct: 183 QEIARV 188


>4FMC-F nrPDB
          Length = 117

 Score = 84.7 bits (208), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 41/116 (35%), Positives = 71/116 (61%), Gaps = 3/116 (2%)

Query: 20  VVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMV-NLQVKGKPVHLHIWDTAGQDDY 78
           ++L+GD G GK+ LL+ FAD  + ESY  T+   + +  +++ GK + L IWDTAGQ+ +
Sbjct: 1   LLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQERF 60

Query: 79  DRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVNHFC-KKVPIIVVGCKTDL 133
             +   +Y  A  +++ +DVT   SF+N+  +W  E++ +  + V  ++VG K DL
Sbjct: 61  RTITSSYYRGAHGIIVVYDVTDQESFNNV-KQWLQEIDRYASENVNKLLVGNKCDL 115


>4PHF-A nrPDB
          Length = 184

 Score = 84.3 bits (207), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 57/182 (31%), Positives = 92/182 (50%), Gaps = 21/182 (11%)

Query: 18  VKVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMVN-LQVKGKPV-HLHIWDTAGQ 75
           +KV+++GD G GKTSL+  + +  +   Y  T+   ++   + V G  V  + +WDTAGQ
Sbjct: 11  LKVIILGDSGVGKTSLMHRYVNDKYSCQYKATIGADFLTKEVTVDGDKVATMQVWDTAGQ 70

Query: 76  DDYDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPE------VNHFCKKVPIIVVGC 129
           + +  L   FY  A   +L +DVT+ +SF+NI   W  E      VN   +  P +++G 
Sbjct: 71  ERFQSLGVAFYRGADCCVLVYDVTNASSFENI-KSWRDEFLVHANVNS-PETFPFVILGN 128

Query: 130 KTDLCKDKSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNVHAVFQEAAEV 189
           K D  + K +V++              QE+A+S+G +     SA+   NV   F+E A  
Sbjct: 129 KIDAEESKKIVSE-----------KSAQELAKSLGDIPLFLTSAKNAINVDTAFEEIARS 177

Query: 190 AL 191
           AL
Sbjct: 178 AL 179


>2F7S-A nrPDB
          Length = 217

 Score = 84.3 bits (207), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 59/187 (31%), Positives = 91/187 (48%), Gaps = 27/187 (14%)

Query: 18  VKVVLVGDGGCGKTSLLMVFADGAFPESYTPTVF-----ERYMVNLQV------KGKPVH 66
           +K++ +GD G GKT+ L  + D  F   +  TV      +R + N Q       K   VH
Sbjct: 26  IKLLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYNAQGPNGSSGKAFKVH 85

Query: 67  LHIWDTAGQDDYDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEV--NHFCKKVPI 124
           L +WDTAGQ+ +  L   F+ DA   LL FD+TS  SF N+ N W  ++  N +C+   I
Sbjct: 86  LQLWDTAGQERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVRN-WMSQLQANAYCENPDI 144

Query: 125 IVVGCKTDLCKDKSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNVHAVFQ 184
           +++G K DL  D+  VN+            + +E+A   G + Y E SA    NV    +
Sbjct: 145 VLIGNKADL-PDQREVNE-----------RQARELADKYG-IPYFETSAATGQNVEKAVE 191

Query: 185 EAAEVAL 191
              ++ +
Sbjct: 192 TLLDLIM 198


>4G01-B nrPDB
          Length = 181

 Score = 84.0 bits (206), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 58/184 (31%), Positives = 88/184 (47%), Gaps = 18/184 (9%)

Query: 8   GEEAPPGVRSV--KVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMVN-LQVKGKP 64
           G  A  G +S+  K+VL+GD G GK+SL++ F    F E    T+   +    L V    
Sbjct: 1   GSMAAAGNKSINAKLVLLGDVGAGKSSLVLRFVKDQFVEFQESTIGAAFFSQTLAVNDAT 60

Query: 65  VHLHIWDTAGQDDYDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVN-HFCKKVP 123
           V   IWDTAGQ+ Y  L P++Y  A+  ++ FDVT+  SF+    +W  E+       + 
Sbjct: 61  VKFEIWDTAGQERYHSLAPMYYRGAAAAIIVFDVTNQASFERA-KKWVQELQAQGNPNMV 119

Query: 124 IIVVGCKTDLCKDKSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNVHAVF 183
           + + G K+DL   +             VT    Q  A+  G + ++E SA+   NV  +F
Sbjct: 120 MALAGNKSDLLDAR------------KVTAEDAQTYAQENG-LFFMETSAKTATNVKEIF 166

Query: 184 QEAA 187
            E A
Sbjct: 167 YEIA 170


>3WYF-A nrPDB
          Length = 219

 Score = 84.0 bits (206), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 55/184 (29%), Positives = 93/184 (50%), Gaps = 22/184 (11%)

Query: 1   MTAAQAAGEEAPPGVRSVKVVLVGDGGCGKTSLLMVFADGAFPESYTPTV-FERYMVNLQ 59
           M+A  A GE     V + K+VLVGDGG GKT+ +     G F + Y  T+  E + ++  
Sbjct: 1   MSAPAANGE-----VPTFKLVLVGDGGTGKTTFVKRHLTGEFEKKYIATIGVEVHPLSFY 55

Query: 60  VKGKPVHLHIWDTAGQDDYDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVNHFC 119
                +   +WDTAG + +  LR  +Y +A   ++ FDVTS  ++ N+ N W+ ++   C
Sbjct: 56  TNFGEIKFDVWDTAGLEKFGGLRDGYYINAQCAIIMFDVTSRITYKNVPN-WHRDLVRVC 114

Query: 120 KKVPIIVVGCKTDLCKDKSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNV 179
           + +PI++ G K D+        K R+   + +T+HR + +        Y + SA+ + N 
Sbjct: 115 ENIPIVLCGNKVDV--------KERKVKAKTITFHRKKNL-------QYYDISAKSNYNF 159

Query: 180 HAVF 183
              F
Sbjct: 160 EKPF 163


>5CLL-A nrPDB
          Length = 191

 Score = 84.0 bits (206), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 50/166 (30%), Positives = 85/166 (51%), Gaps = 17/166 (10%)

Query: 19  KVVLVGDGGCGKTSLLMVFADGAFPESYTPTV-FERYMVNLQVKGKPVHLHIWDTAGQDD 77
           K+VLVGDGG GKT+ +     G F + Y  T+  E + +       P+  ++WDTAGQ+ 
Sbjct: 12  KLVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGPIKFNVWDTAGQEK 71

Query: 78  YDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVNHFCKKVPIIVVGCKTDLCKDK 137
           +  LR  +Y  A   ++ FDVTS  ++ N+ N W+ ++   C+ +PI++ G K D+    
Sbjct: 72  FGGLRDGYYIQAQCAIIMFDVTSRVTYKNVPN-WHRDLVRVCENIPIVLCGNKVDI---- 126

Query: 138 SLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNVHAVF 183
               K R+   + + +HR + +        Y + SA+ + N    F
Sbjct: 127 ----KDRKVKAKSIVFHRKKNL-------QYYDISAKSNYNFEKPF 161


>5UWI-A nrPDB
          Length = 237

 Score = 83.6 bits (205), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 50/166 (30%), Positives = 85/166 (51%), Gaps = 17/166 (10%)

Query: 19  KVVLVGDGGCGKTSLLMVFADGAFPESYTPTV-FERYMVNLQVKGKPVHLHIWDTAGQDD 77
           K+VLVGDGG GKT+ +     G F + Y  T+  E + +       P+  ++WDTAGQ+ 
Sbjct: 33  KLVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGPIKFNVWDTAGQEK 92

Query: 78  YDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVNHFCKKVPIIVVGCKTDLCKDK 137
           +  LR  +Y  A   ++ FDVTS  ++ N+ N W+ ++   C+ +PI++ G K D+    
Sbjct: 93  FGGLRDGYYIQAQCAIIMFDVTSRVTYKNVPN-WHRDLVRVCENIPIVLCGNKVDI---- 147

Query: 138 SLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNVHAVF 183
               K R+   + + +HR + +        Y + SA+ + N    F
Sbjct: 148 ----KDRKVKAKSIVFHRKKNL-------QYYDISAKSNYNFEKPF 182


>2HUP-A nrPDB
          Length = 201

 Score = 83.2 bits (204), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 52/171 (30%), Positives = 84/171 (49%), Gaps = 15/171 (8%)

Query: 19  KVVLVGDGGCGKTSLLMVFADGAFPESYTPTV-FERYMVNLQVKGKPVHLHIWDTAGQDD 77
           K+VLVGD   GKT ++  F  GAF E    T+  +  M  L+++GK V L IWDTAGQ+ 
Sbjct: 31  KLVLVGDASVGKTCVVQRFKTGAFSERQGSTIGVDFTMKTLEIQGKRVKLQIWDTAGQER 90

Query: 78  YDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVNHFC-KKVPIIVVGCKTDLCKD 136
           +  +   +Y  A+  +L +D+T  +SF ++   W  +V  +    +  +++G K+DL + 
Sbjct: 91  FRTITQSYYRSANGAILAYDITKRSSFLSV-PHWIEDVRKYAGSNIVQLLIGNKSDLSE- 148

Query: 137 KSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNVHAVFQEAA 187
                      L  V+    Q +A     +  +E SA+   NV   F   A
Sbjct: 149 -----------LREVSLAEAQSLAEHYDILCAIETSAKDSSNVEEAFLRVA 188


>3T5G-A nrPDB
          Length = 181

 Score = 82.4 bits (202), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 54/173 (31%), Positives = 89/173 (51%), Gaps = 14/173 (8%)

Query: 13  PGVRSVKVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMVNLQVKGKPVHLHIWDT 72
           P  +S K+ ++G    GK+SL + F +G F +SY PT+   +   + V G+  HL + DT
Sbjct: 2   PQSKSRKIAILGYRSVGKSSLTIQFVEGQFVDSYDPTIENTFTKLITVNGQEYHLQLVDT 61

Query: 73  AGQDDYDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVNHFCK-KVPIIVVGCKT 131
           AGQD+Y      +  D +  +L + VTS  SF+ I       ++   K ++PI++VG K 
Sbjct: 62  AGQDEYSIFPQTYSIDINGYILVYSVTSIKSFEVIKVIHGKLLDMVGKVQIPIMLVGNKK 121

Query: 132 DLCKDKSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNVHAVFQ 184
           DL  ++             ++Y  G+ +A S  A A+LE SA+ +     VF+
Sbjct: 122 DLHMER------------VISYEEGKALAESWNA-AFLESSAKENQTAVDVFR 161


>5FBL-B nrPDB
          Length = 221

 Score = 82.4 bits (202), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 56/168 (33%), Positives = 83/168 (49%), Gaps = 16/168 (9%)

Query: 19  KVVLVGDGGCGKTSLLMVFADGAFP-ESYTPTVFERYMVNLQVKGKPVHLHIWDTAGQDD 77
           KVVL+GD G GK++LL  F    F  ES +    E    ++QV GK +   IWDTAGQ+ 
Sbjct: 18  KVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQER 77

Query: 78  YDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEV-NHFCKKVPIIVVGCKTDLCKD 136
           Y  +   +Y  A   LL +D+    +++N+  RW  E+ +H    + I++VG K+DL   
Sbjct: 78  YRAITSAYYRGAVGALLVYDIAKHLTYENV-ERWLKELRDHADSNIVIMLVGNKSDL--- 133

Query: 137 KSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNVHAVFQ 184
                      L  V     +  A   G ++++E SA    NV A FQ
Sbjct: 134 ---------RHLRAVPTDEARAFAEKNG-LSFIETSALDSTNVEAAFQ 171


>4KLZ-A nrPDB
          Length = 173

 Score = 82.4 bits (202), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 49/177 (27%), Positives = 90/177 (50%), Gaps = 22/177 (12%)

Query: 16  RSVKVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMVNLQVKGKPVHLHIWDTAGQ 75
           R  K+V++G GG GK+++ M F    FPE + PT+ + Y + +++  +P +L I DTAGQ
Sbjct: 4   REYKLVMLGAGGVGKSAMTMQFISHRFPEDHDPTIEDAYKIRIRIDDEPANLDILDTAGQ 63

Query: 76  DDYDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVNHFCKK---VPIIVVGCKTD 132
            ++  +R  +       ++C+ +T   SF  +  R + ++ +  ++    P+++VG K+D
Sbjct: 64  AEFTAMRDQYMRAGEGFIICYSITDRRSFHEV--REFKQLIYRVRRTDDTPVVLVGNKSD 121

Query: 133 LCKDKSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSAR----LHDNVHAVFQE 185
           L +            L  VT   G  +AR   +  + E SA     + D  HA+ +E
Sbjct: 122 LKQ------------LRQVTKEEGLALAREF-SCPFFETSAAYRYYIDDVFHALVRE 165


>2GIL-A nrPDB
          Length = 162

 Score = 82.0 bits (201), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 50/171 (29%), Positives = 88/171 (51%), Gaps = 16/171 (9%)

Query: 19  KVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMV-NLQVKGKPVHLHIWDTAGQDD 77
           K+V +G+   GKTSL+  F   +F  +Y  T+   ++   + ++ + V L +WDTAGQ+ 
Sbjct: 3   KLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQER 62

Query: 78  YDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEV-NHFCKKVPIIVVGCKTDLCKD 136
           +  L P +  D++V ++ +D+T+ NSF     +W  +V       V I++VG KTDL   
Sbjct: 63  FRSLIPSYIRDSTVAVVVYDITNVNSFQQT-TKWIDDVRTERGSDVIIMLVGNKTDLADK 121

Query: 137 KSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNVHAVFQEAA 187
           +             V+   G+  A+ +  V ++E SA+   NV  +F+  A
Sbjct: 122 R------------QVSIEEGERKAKELN-VMFIETSAKAGYNVKQLFRRVA 159


>2FG5-A nrPDB
          Length = 192

 Score = 81.6 bits (200), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 50/173 (28%), Positives = 88/173 (50%), Gaps = 16/173 (9%)

Query: 14  GVRSVKVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMVNLQVKGKPVH-LHIWDT 72
            +R +KV L+GD G GK+S++  F    F  + +PT+   +M      G  +H   IWDT
Sbjct: 20  AIRELKVCLLGDTGVGKSSIVCRFVQDHFDHNISPTIGASFMTKTVPCGNELHKFLIWDT 79

Query: 73  AGQDDYDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVN-HFCKKVPIIVVGCKT 131
           AGQ+ +  L P++Y  ++  ++ +D+T  +SF  +  +W  E+  H  + + + + G K 
Sbjct: 80  AGQERFHSLAPMYYRGSAAAVIVYDITKQDSFYTL-KKWVKELKEHGPENIVMAIAGNKC 138

Query: 132 DLCKDKSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNVHAVFQ 184
           DL            + +  V     +E A S+GA+  +E SA+   N+  +FQ
Sbjct: 139 DL------------SDIREVPLKDAKEYAESIGAIV-VETSAKNAINIEELFQ 178


>2F9L-A nrPDB
          Length = 199

 Score = 81.6 bits (200), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 45/117 (38%), Positives = 67/117 (57%), Gaps = 3/117 (2%)

Query: 19  KVVLVGDGGCGKTSLLMVFADGAFP-ESYTPTVFERYMVNLQVKGKPVHLHIWDTAGQDD 77
           KVVL+GD G GK++LL  F    F  ES +    E    ++QV GK +   IWDTAGQ+ 
Sbjct: 7   KVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQER 66

Query: 78  YDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEV-NHFCKKVPIIVVGCKTDL 133
           Y R+   +Y  A   LL +D+    +++N+  RW  E+ +H    + I++VG K+DL
Sbjct: 67  YRRITSAYYRGAVGALLVYDIAKHLTYENV-ERWLKELRDHADSNIVIMLVGNKSDL 122


>2IEY-A nrPDB
          Length = 195

 Score = 81.6 bits (200), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 57/176 (32%), Positives = 84/176 (47%), Gaps = 27/176 (15%)

Query: 18  VKVVLVGDGGCGKTSLLMVFADGAFPESYTPTV---FERYMVNLQVKGK--------PVH 66
           +K++ +GD G GKT+ L  + D  F   +  TV   F    V    +G          VH
Sbjct: 12  IKLLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYDTQGADGASGKAFKVH 71

Query: 67  LHIWDTAGQDDYDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEV--NHFCKKVPI 124
           L +WDTAG + +  L   F+ DA   LL FD+TS  SF N+ N W  ++  N +C+   I
Sbjct: 72  LQLWDTAGLERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVRN-WMSQLQANAYCENPDI 130

Query: 125 IVVGCKTDLCKDKSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNVH 180
           +++G K DL  D+  VN+            + +E+A   G + Y E SA    NV 
Sbjct: 131 VLIGNKADL-PDQREVNE-----------RQARELAEKYG-IPYFETSAATGQNVE 173


>2P5S-A nrPDB
          Length = 199

 Score = 81.6 bits (200), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 60/177 (33%), Positives = 92/177 (51%), Gaps = 11/177 (6%)

Query: 16  RSVKVVLVGDGGCGKTSLLMVFADGAFPESYTPTV-FERYMVNLQVKGKPVHLHIWDTAG 74
           ++ K+VL GD   GK+S LM      F E+ + T+  +  M  L V G+   L +WDTAG
Sbjct: 27  KAYKIVLAGDAAVGKSSFLMRLCKNEFRENISATLGVDFQMKTLIVDGERTVLQLWDTAG 86

Query: 75  QDDYDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVNHFC-KKVPIIVVGCKTDL 133
           Q+ +  +   ++  A  +LL +DVT   SF NI   W   +     + VPI++VG K D+
Sbjct: 87  QERFRSIAKSYFRKADGVLLLYDVTCEKSFLNI-REWVDMIEDAAHETVPIMLVGNKADI 145

Query: 134 CKDKSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDN-VHAVFQEAAEV 189
            +D +        G + V  H G+++A + GA+ + E SA+   N V AV   A EV
Sbjct: 146 -RDTAAT-----EGQKCVPGHFGEKLAMTYGAL-FCETSAKDGSNIVEAVLHLAREV 195


>5YOZ-A nrPDB
          Length = 177

 Score = 81.6 bits (200), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 51/173 (29%), Positives = 83/173 (47%), Gaps = 15/173 (8%)

Query: 17  SVKVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMV-NLQVKGKPVHLHIWDTAGQ 75
           S K+V++G+ G GK+S+ + F    F  +   T+   ++   + + G+ +   IWDTAG 
Sbjct: 15  SAKIVMLGESGAGKSSIALRFTRNEFLANQETTIGAAFLSKTVMIDGRALKYEIWDTAGL 74

Query: 76  DDYDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVNHFCKKVPIIV-VGCKTDLC 134
           + +  L P++Y  AS  L+ +D+T+  S       W  E+        IIV VG K DL 
Sbjct: 75  ERFRSLAPIYYRGASGALVVYDITNSESLKKA-QTWIKELRANADPSLIIVLVGNKKDL- 132

Query: 135 KDKSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNVHAVFQEAA 187
                        L  V++  GQ +A      A+ E SA+ ++NV  VF + A
Sbjct: 133 -----------GSLRQVSFEDGQRLAAEEQLAAFYEASAKDNNNVEQVFLDLA 174


>3CUE-F nrPDB
          Length = 206

 Score = 80.9 bits (198), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 54/188 (28%), Positives = 90/188 (47%), Gaps = 16/188 (8%)

Query: 19  KVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMV-NLQVKGKPVHLHIWDTAGQDD 77
           K++L+G+ G GK+ LL+ F+D  +   Y  T+   + +  +++ GK V L IWDTAGQ+ 
Sbjct: 10  KLLLIGNSGVGKSCLLLRFSDDTYTNDYISTIGVDFKIKTVELDGKTVKLQIWDTAGQER 69

Query: 78  YDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVNHFCKKVPI-IVVGCKTDLCKD 136
           +  +   +Y  +  +++ +DVT   SF+ +   W  E++ +     + ++VG K DL KD
Sbjct: 70  FRTITSSYYRGSHGIIIVYDVTDQESFNGV-KMWLQEIDRYATSTVLKLLVGNKCDL-KD 127

Query: 137 KSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNVHAVFQEAAEVALSSRGR 196
           K +V            Y   +E A     + +LE SA    NV   F   A     S  +
Sbjct: 128 KRVVE-----------YDVAKEFA-DANKMPFLETSALDSTNVEDAFLTMARQIKESMSQ 175

Query: 197 NFWRRITQ 204
                 TQ
Sbjct: 176 QNLNETTQ 183


>2IEZ-A nrPDB
          Length = 220

 Score = 80.9 bits (198), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 57/176 (32%), Positives = 84/176 (47%), Gaps = 27/176 (15%)

Query: 18  VKVVLVGDGGCGKTSLLMVFADGAFPESYTPTV---FERYMVNLQVKGK--------PVH 66
           +K++ +GD G GKT+ L  + D  F   +  TV   F    V    +G          VH
Sbjct: 12  IKLLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYDTQGADGASGKAFKVH 71

Query: 67  LHIWDTAGQDDYDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEV--NHFCKKVPI 124
           L +WDTAG + +  L   F+ DA   LL FD+TS  SF N+ N W  ++  N +C+   I
Sbjct: 72  LQLWDTAGLERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVRN-WMSQLQANAYCENPDI 130

Query: 125 IVVGCKTDLCKDKSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNVH 180
           +++G K DL  D+  VN+            + +E+A   G + Y E SA    NV 
Sbjct: 131 VLIGNKADL-PDQREVNE-----------RQARELAEKYG-IPYFETSAATGQNVE 173


>4UJ4-A nrPDB
          Length = 185

 Score = 80.9 bits (198), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 55/168 (32%), Positives = 82/168 (48%), Gaps = 16/168 (9%)

Query: 19  KVVLVGDGGCGKTSLLMVFADGAFP-ESYTPTVFERYMVNLQVKGKPVHLHIWDTAGQDD 77
           KVVL+GD G GK++LL  F    F  ES +    E    ++QV GK +   IWDTAG + 
Sbjct: 12  KVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGLER 71

Query: 78  YDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEV-NHFCKKVPIIVVGCKTDLCKD 136
           Y  +   +Y  A   LL +D+    +++N+  RW  E+ +H    + I++VG K+DL   
Sbjct: 72  YRAITSAYYRGAVGALLVYDIAKHLTYENV-ERWLKELRDHADSNIVIMLVGNKSDL--- 127

Query: 137 KSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNVHAVFQ 184
                      L  V     +  A   G ++++E SA    NV A FQ
Sbjct: 128 ---------RHLRAVPTDEARAFAEKNG-LSFIETSALDSTNVEAAFQ 165


>5LEF-A nrPDB
          Length = 191

 Score = 80.1 bits (196), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 50/175 (28%), Positives = 89/175 (50%), Gaps = 16/175 (9%)

Query: 15  VRSVKVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMVN-LQVKGKPVHLHIWDTA 73
           +R  K+V +G+   GKTSL+  F   +F  +Y  T+   ++   + ++ + V L +WDTA
Sbjct: 7   LRKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTA 66

Query: 74  GQDDYDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEV-NHFCKKVPIIVVGCKTD 132
           G + +  L P +  D++V ++ +D+T+ NSF     +W  +V       V I++VG KTD
Sbjct: 67  GLERFRSLIPSYIRDSTVAVVVYDITNVNSFQQT-TKWIDDVRTERGSDVIIMLVGNKTD 125

Query: 133 LCKDKSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNVHAVFQEAA 187
           L   +             V+   G+  A+ +  V ++E SA+   NV  +F+  A
Sbjct: 126 LADKR------------QVSIEEGERKAKELN-VMFIETSAKAGYNVKQLFRRVA 167


>3BFK-A nrPDB
          Length = 181

 Score = 80.1 bits (196), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 54/170 (31%), Positives = 87/170 (51%), Gaps = 17/170 (10%)

Query: 19  KVVLVGDGGCGKTSLLMVFADGAFP-ESYTPTVFERYMVNLQVKG-KPVHLHIWDTAGQD 76
           K+VL+GD G GK++LL  F    F  ES +    E    ++Q+K  K +   IWDTAGQ+
Sbjct: 9   KIVLIGDSGVGKSNLLSRFTRDEFNLESKSTIGVEFATKSIQLKNNKIIKAQIWDTAGQE 68

Query: 77  DYDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEV-NHFCKKVPIIVVGCKTDLCK 135
            Y  +   +Y  A   LL +D+T  NSF+NI  +W  E+ ++    + I++VG K+DL  
Sbjct: 69  RYRAITSAYYRGAVGALLVYDITKKNSFENI-EKWLKELRDNADSNIVILLVGNKSDLKH 127

Query: 136 DKSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNVHAVFQE 185
            + +      N  +   Y + +++       A++E SA    NV   F +
Sbjct: 128 LRVI------NDNDATQYAKKEKL-------AFIETSALEATNVELAFHQ 164


>1YZN-A nrPDB
          Length = 185

 Score = 80.1 bits (196), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 51/171 (29%), Positives = 87/171 (50%), Gaps = 16/171 (9%)

Query: 19  KVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMV-NLQVKGKPVHLHIWDTAGQDD 77
           K++L+G+ G GK+ LL+ F+D  +   Y  T+   + +  +++ GK V L IWDTAGQ+ 
Sbjct: 23  KLLLIGNSGVGKSCLLLRFSDDTYTNDYISTIGVDFKIKTVELDGKTVKLQIWDTAGQER 82

Query: 78  YDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVNHFCKKVPI-IVVGCKTDLCKD 136
           +  +   +Y  +  +++ +DVT   SF+ +   W  E++ +     + ++VG K DL KD
Sbjct: 83  FRTITSSYYRGSHGIIIVYDVTDQESFNGV-KMWLQEIDRYATSTVLKLLVGNKCDL-KD 140

Query: 137 KSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNVHAVFQEAA 187
           K +V            Y   +E A +   + +LE SA    NV   F   A
Sbjct: 141 KRVVE-----------YDVAKEFADA-NKMPFLETSALDSTNVEDAFLTMA 179


>4KU4-A nrPDB
          Length = 206

 Score = 79.7 bits (195), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 58/193 (30%), Positives = 88/193 (45%), Gaps = 36/193 (18%)

Query: 13  PGVRSV--KVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMVNLQVKGKPVHLHIW 70
           PG   +  K+ ++G+GG GKTSL +      F E+Y PT+ + Y     + G P HL I 
Sbjct: 8   PGAGKITDKIAMLGEGGVGKTSLTVNLTKHVFSETYDPTLEDSYRRQCVIDGIPSHLEIL 67

Query: 71  DTAGQDDYDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVNHFCKKVP------- 123
           DTAGQ++Y  LR  +     + ++ FDVT  +SF+    R + EV    +K+        
Sbjct: 68  DTAGQEEYGALREQWIRQNELFVIVFDVTRRSSFEAA-ERLFEEVIQTKRKLDETRRHPG 126

Query: 124 -------------IIVVGCKTDLCKDKSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLE 170
                        +++VG K DL          RR     V    G  +A+ +G   ++E
Sbjct: 127 DRHPDDLPFAPSLVVLVGNKCDL--------DTRRE----VGTLEGSSLAKKLGC-GFVE 173

Query: 171 CSARLHDNVHAVF 183
            SA+L  NV   F
Sbjct: 174 TSAKLGTNVEEAF 186


>1Z0A-A nrPDB
          Length = 174

 Score = 79.3 bits (194), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 49/171 (28%), Positives = 84/171 (49%), Gaps = 14/171 (8%)

Query: 19  KVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMVNL-QVKGKPVHLHIWDTAGQDD 77
           K +++GD G GK+ LL+ F D  F   +  T+   +   +  + GK + L IWDTAGQ+ 
Sbjct: 12  KYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIWDTAGQES 71

Query: 78  YDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVNHFCKKVPIIVVGCKTDLCKDK 137
           +  +   +Y  A+  LL +D+T  ++F+++         H    + I+++G K+DL    
Sbjct: 72  FRSITRSYYRGAAGALLVYDITRRDTFNHLTTWLEDARQHSNSNMVIMLIGNKSDL---- 127

Query: 138 SLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNVHAVFQEAAE 188
               + RR     V    G+  AR  G + ++E SA+   NV   F   A+
Sbjct: 128 ----ESRR----EVKKEEGEAFAREHGLI-FMETSAKTASNVEEAFINTAK 169


>5CM8-B nrPDB
          Length = 203

 Score = 79.0 bits (193), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 55/167 (32%), Positives = 80/167 (47%), Gaps = 16/167 (9%)

Query: 19  KVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMVNLQVKGKPVHLHIWDTAGQDDY 78
           KV++VG GG GK++L + F    F E Y PT  + Y   + + G+ V + I DTAGQ+DY
Sbjct: 15  KVIMVGSGGVGKSALTLQFMYDEFVEDYEPTKADSYRKKVVLDGEEVQIDILDTAGQEDY 74

Query: 79  DRLRPLFYPDASVLLLCFDVTSPNSFDNI--FNRWYPEVNHFCKKVPIIVVGCKTDLCKD 136
             +R  ++      L  F +T   SF     F      V +  + +P ++VG K DL   
Sbjct: 75  AAIRDNYFRSGEGFLCVFSITDDESFQATQEFREQILRVKN-DESIPFLLVGNKCDL--- 130

Query: 137 KSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNVHAVF 183
               N  R+  L      R Q+      AV Y+E SA+  +NV  VF
Sbjct: 131 ----NDKRKVPLSECQL-RAQQW-----AVPYVETSAKTRENVDKVF 167


>3RAB-A nrPDB
          Length = 169

 Score = 78.6 bits (192), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 48/173 (27%), Positives = 86/173 (49%), Gaps = 16/173 (9%)

Query: 19  KVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMVNLQVKG-KPVHLHIWDTAGQDD 77
           K++++G+   GKTS L  +AD +F  ++  TV   + V    +  K + L IWDTAGQ+ 
Sbjct: 7   KILIIGNSSVGKTSFLFRYADDSFTPAFVSTVGIDFKVKTIYRNDKRIKLQIWDTAGQER 66

Query: 78  YDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVNHFC-KKVPIIVVGCKTDLCKD 136
           Y  +   +Y  A   +L +D+T+  SF N    W  ++  +      +++VG K D+  +
Sbjct: 67  YRTITTAYYRGAMGFILMYDITNEESF-NAVQDWSTQIKTYSWDNAQVLLVGNKCDMEDE 125

Query: 137 KSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNVHAVFQEAAEV 189
           +             V+  RG+++A  +G   + E SA+ + NV   F+   +V
Sbjct: 126 R------------VVSSERGRQLADHLG-FEFFEASAKDNINVKQTFERLVDV 165


>3BC1-A nrPDB
          Length = 195

 Score = 77.8 bits (190), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 58/178 (32%), Positives = 85/178 (47%), Gaps = 26/178 (14%)

Query: 18  VKVVLVGDGGCGKTSLLMVFADGAFPESYTPTV---FERYMVNLQV--------KGKPVH 66
           +K + +GD G GKTS+L  + DG F   +  TV   F    V  +         +G+ +H
Sbjct: 12  IKFLALGDSGVGKTSVLYQYTDGKFNSKFITTVGIDFREKRVVYRANGPDGAVGRGQRIH 71

Query: 67  LHIWDTAGQDDYDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVN-HFCKKVPII 125
           L +WDTAG + +  L   F+ DA   LL FD+T+  SF N+ N W  ++  H   + P I
Sbjct: 72  LQLWDTAGLERFRSLTTAFFRDAMGFLLLFDLTNEQSFLNVRN-WISQLQMHAYSENPDI 130

Query: 126 VVGCKTDLCKDKSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNV-HAV 182
           V      LC +KS +   R      V     +E+A   G + Y E SA    N+ HA+
Sbjct: 131 V------LCGNKSDLEDQR-----AVKEEEARELAEKYG-IPYFETSAANGTNISHAI 176


>1Z22-A nrPDB
          Length = 168

 Score = 77.8 bits (190), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 42/130 (32%), Positives = 69/130 (53%), Gaps = 8/130 (6%)

Query: 17  SVKVVLVGDGGCGKTSLLMVFADGAFPESYTPTV----FERYMVNLQVKGKPVHLHIWDT 72
           ++K+V+VG+G  GK+S++  +  G F + Y  T+     ER    +QV  + V L +WDT
Sbjct: 5   AIKMVVVGNGAVGKSSMIQRYCKGIFTKDYKKTIGVDFLER---QIQVNDEDVRLMLWDT 61

Query: 73  AGQDDYDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVNHFCKKVPIIVVGCKTD 132
           AGQ+++D +   +Y  A   +L F  T   SF+ I + W  +V      +P  +V  K D
Sbjct: 62  AGQEEFDAITKAYYRGAQACVLVFSTTDRESFEAI-SSWREKVVAEVGDIPTALVQNKID 120

Query: 133 LCKDKSLVNK 142
           L  D  + N+
Sbjct: 121 LLDDSCIKNE 130


>1YVD-A nrPDB
          Length = 169

 Score = 76.3 bits (186), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 46/174 (26%), Positives = 90/174 (51%), Gaps = 16/174 (9%)

Query: 14  GVRSVKVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMV-NLQVKGKPVHLHIWDT 72
            +R +KV L+GD G GK+S++  F + +F  +  PT+   +M   +Q + +     IWDT
Sbjct: 2   SLRELKVCLLGDTGVGKSSIVWRFVEDSFDPNINPTIGASFMTKTVQYQNELHKFLIWDT 61

Query: 73  AGQDDYDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEV-NHFCKKVPIIVVGCKT 131
           AGQ+ +  L P++Y  ++  ++ +D+T   +F  + N W  E+  H    + + + G K 
Sbjct: 62  AGQERFRALAPMYYRGSAAAIIVYDITKEETFSTLKN-WVRELRQHGPPSIVVAIAGNKC 120

Query: 132 DLCKDKSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNVHAVFQE 185
           DL   + ++ +              ++ A S+ A+ ++E SA+   N++ +F E
Sbjct: 121 DLTDVREVMER------------DAKDYADSIHAI-FVETSAKNAININELFIE 161


>6IYB-A nrPDB
          Length = 199

 Score = 76.3 bits (186), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 55/180 (30%), Positives = 82/180 (45%), Gaps = 21/180 (11%)

Query: 18  VKVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMVN-LQVKGKPVHLHIWDTAGQD 76
           +KV+++GD G GKTSL+  + +  F   Y  T+   ++   + V  + V + IWDTAG +
Sbjct: 14  LKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGLE 73

Query: 77  DYDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEV-----NHFCKKVPIIVVGCKT 131
            + +    FY  A   +L FDVT+PN+F  + + W  E          +  P +V+G K 
Sbjct: 74  RF-QSGVAFYRGADCCVLVFDVTAPNTFKTL-DSWRDEFLIQASPRDPENFPFVVLGNKI 131

Query: 132 DLCKDKSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNVHAVFQEAAEVAL 191
           DL   +             V   R Q    S   + Y E SA+   NV   FQ  A  AL
Sbjct: 132 DLENRQ-------------VATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIARNAL 178


>1Z0F-A nrPDB
          Length = 179

 Score = 75.9 bits (185), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 48/172 (27%), Positives = 86/172 (50%), Gaps = 16/172 (9%)

Query: 19  KVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMVNL-QVKGKPVHLHIWDTAGQDD 77
           K +++GD G GK+ LL  F +  F      T+   +   + +V G+ + L IWDTAGQ+ 
Sbjct: 17  KYIIIGDMGVGKSCLLHQFTEKKFMADCPHTIGVEFGTRIIEVSGQKIKLQIWDTAGQER 76

Query: 78  YDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVNHFCK-KVPIIVVGCKTDLCKD 136
           +  +   +Y  A+  L+ +D+T  ++++++ + W  +  +       II++G K DL   
Sbjct: 77  FRAVTRSYYRGAAGALMVYDITRRSTYNHL-SSWLTDARNLTNPNTVIILIGNKADLEAQ 135

Query: 137 KSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNVHAVFQEAAE 188
           +             VTY   ++ A   G + +LE SA+  +NV   F EAA+
Sbjct: 136 RD------------VTYEEAKQFAEENG-LLFLEASAKTGENVEDAFLEAAK 174


>4RKE-A nrPDB
          Length = 176

 Score = 75.9 bits (185), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 51/174 (29%), Positives = 83/174 (47%), Gaps = 20/174 (11%)

Query: 19  KVVLVGDGGCGKTSLLMVFADGAFPESYTPTV---FERYMVNLQVKGKPVHLHIWDTAGQ 75
           K +++GD G GK+ LL+ F D  F   +  T+   F   M+   + GK + L IWDTAG 
Sbjct: 12  KYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMIT--IDGKQIKLQIWDTAGL 69

Query: 76  DDYDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEV-NHFCKKVPIIVVGCKTDLC 134
           + +  +   +Y  A+  LL +D+T   +F+++   W  +   H    + I+++G K+DL 
Sbjct: 70  EAFRSITRSYYRGAAGALLVYDITRRETFNHL-TTWLEDARQHSNSNMVIMLIGNKSDL- 127

Query: 135 KDKSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNVHAVFQEAAE 188
                      +    V    G+  AR  G V ++E SAR   NV   F   A+
Sbjct: 128 -----------DSRREVKKEEGEAFAREHGLV-FMETSARTAANVEEAFINTAK 169


>1TU4-A nrPDB
          Length = 171

 Score = 75.5 bits (184), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 48/172 (27%), Positives = 81/172 (47%), Gaps = 16/172 (9%)

Query: 19  KVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMVN-LQVKGKPVHLHIWDTAGQDD 77
           K+VL+G+   GK+SL++ F  G F E    T+   ++   + +    V   IWDTAGQ+ 
Sbjct: 9   KLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQER 68

Query: 78  YDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVNHFCK-KVPIIVVGCKTDLCKD 136
           Y  L P++Y  A   ++ +D+T+  SF    N W  E+       + I + G K DL   
Sbjct: 69  YHSLAPMYYRGAQAAIVVYDITNEESFARAKN-WVKELQRQASPNIVIALSGNKADLANK 127

Query: 137 KSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNVHAVFQEAAE 188
           ++            V +   Q  A    ++ ++E SA+   NV+ +F   A+
Sbjct: 128 RA------------VDFQEAQSYADD-NSLLFMETSAKTSMNVNEIFMAIAK 166


>3CPJ-B nrPDB
          Length = 223

 Score = 75.1 bits (183), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 48/169 (28%), Positives = 79/169 (46%), Gaps = 16/169 (9%)

Query: 19  KVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMV-NLQVKGKPVHLHIWDTAGQDD 77
           K+VL+GD G GK++LL  F    F      T+   +    L+++GK +   IWDTAGQ+ 
Sbjct: 15  KIVLIGDSGVGKSNLLSRFTKNEFNMDSKSTIGVEFATRTLEIEGKRIKAQIWDTAGQER 74

Query: 78  YDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVNHFC-KKVPIIVVGCKTDLCKD 136
           Y  +   +Y  A   L+ +D++  +S++N  N W  E+       V + ++G K+DL   
Sbjct: 75  YRAITSAYYRGAVGALIVYDISKSSSYENC-NHWLSELRENADDNVAVGLIGNKSDLAH- 132

Query: 137 KSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNVHAVFQE 185
                      L  V     +  A+    + + E SA   +NV   F+E
Sbjct: 133 -----------LRAVPTEESKTFAQE-NQLLFTETSALNSENVDKAFEE 169


>1ZBD-A nrPDB
          Length = 203

 Score = 74.7 bits (182), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 47/173 (27%), Positives = 85/173 (49%), Gaps = 16/173 (9%)

Query: 19  KVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMVNLQVKG-KPVHLHIWDTAGQDD 77
           K++++G+   GKTS L  +AD +F  ++  TV   + V    +  K + L IWDTAG + 
Sbjct: 10  KILIIGNSSVGKTSFLFRYADDSFTPAFVSTVGIDFKVKTIYRNDKRIKLQIWDTAGLER 69

Query: 78  YDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVNHFC-KKVPIIVVGCKTDLCKD 136
           Y  +   +Y  A   +L +D+T+  SF N    W  ++  +      +++VG K D+  +
Sbjct: 70  YRTITTAYYRGAMGFILMYDITNEESF-NAVQDWSTQIKTYSWDNAQVLLVGNKCDMEDE 128

Query: 137 KSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNVHAVFQEAAEV 189
           +             V+  RG+++A  +G   + E SA+ + NV   F+   +V
Sbjct: 129 R------------VVSSERGRQLADHLG-FEFFEASAKDNINVKQTFERLVDV 168


>1ZC4-A nrPDB
          Length = 175

 Score = 74.3 bits (181), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 51/167 (30%), Positives = 76/167 (45%), Gaps = 16/167 (9%)

Query: 19  KVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMVNLQVKGKPVHLHIWDTAGQDDY 78
           KV++VG GG GK++L + F    F E Y PT  + Y   + + G+ V + I DTAG +DY
Sbjct: 8   KVIMVGSGGVGKSALTLQFMYDEFVEDYEPTKADSYRKKVVLDGEEVQIDILDTAGLEDY 67

Query: 79  DRLRPLFYPDASVLLLCFDVTSPNSFDNI--FNRWYPEVNHFCKKVPIIVVGCKTDLCKD 136
             +R  ++      L  F +T   SF     F      V    + VP ++VG K+DL   
Sbjct: 68  AAIRDNYFRSGEGFLCVFSITEMESFAATADFREQILRVKE-DENVPFLLVGNKSDLEDK 126

Query: 137 KSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNVHAVF 183
           + +  +  +N  E                V Y+E SA+   NV  VF
Sbjct: 127 RQVSVEEAKNRAEQWN-------------VNYVETSAKTRANVDKVF 160


>3DZ8-A nrPDB
          Length = 191

 Score = 74.3 bits (181), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 49/172 (28%), Positives = 84/172 (48%), Gaps = 24/172 (13%)

Query: 19  KVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMVNLQVKG-----KPVHLHIWDTA 73
           K++++G+   GKTS L  +AD  F  ++  TV     ++ +VK      K V L IWDTA
Sbjct: 25  KLLIIGNSSVGKTSFLFRYADDTFTPAFVSTV----GIDFKVKTVYRHEKRVKLQIWDTA 80

Query: 74  GQDDYDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVNHFC-KKVPIIVVGCKTD 132
           GQ+ Y  +   +Y  A   +L +D+T+  SF N    W  ++  +      +I+VG K D
Sbjct: 81  GQERYRTITTAYYRGAMGFILMYDITNEESF-NAVQDWATQIKTYSWDNAQVILVGNKCD 139

Query: 133 LCKDKSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNVHAVFQ 184
           + +++             V   +GQ +A  +G   + E SA+ + +V   F+
Sbjct: 140 MEEER------------VVPTEKGQLLAEQLG-FDFFEASAKENISVRQAFE 178


>5UB8-A nrPDB
          Length = 222

 Score = 73.9 bits (180), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 42/117 (35%), Positives = 64/117 (54%), Gaps = 3/117 (2%)

Query: 19  KVVLVGDGGCGKTSLLMVFADGAFP-ESYTPTVFERYMVNLQVKGKPVHLHIWDTAGQDD 77
           K+VL+GD G GK++LL  F    F  ES +    E     L++ GK V   IWDTAGQ+ 
Sbjct: 17  KIVLIGDSGVGKSNLLSRFTRDEFNLESRSTIGVEFATRTLEIDGKRVKAQIWDTAGQER 76

Query: 78  YDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEV-NHFCKKVPIIVVGCKTDL 133
           Y  +   +Y  A   L+ +D+    S++++ +RW  E+  H    + I +VG K+DL
Sbjct: 77  YRAITSAYYRGAVGALIVYDIAKTESYESV-SRWLKELKEHADANIIIELVGNKSDL 132


>5XR6-A nrPDB
          Length = 194

 Score = 73.9 bits (180), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 44/117 (37%), Positives = 63/117 (53%), Gaps = 3/117 (2%)

Query: 19  KVVLVGDGGCGKTSLLMVFADGAFP-ESYTPTVFERYMVNLQVKGKPVHLHIWDTAGQDD 77
           K+VL+GD G GK++LL  F    F  ES +    E      +V+GK V   IWDTAGQ+ 
Sbjct: 27  KLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATKTTKVEGKVVKAQIWDTAGQER 86

Query: 78  YDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEV-NHFCKKVPIIVVGCKTDL 133
           Y  +   +Y  A   LL +DVT   +F+N   RW  E+  H    + ++++G K DL
Sbjct: 87  YRAITSAYYRGAVGALLIYDVTRHATFENA-ARWLRELRGHTDPNIVVMLIGNKCDL 142


>2GF9-A nrPDB
          Length = 189

 Score = 73.9 bits (180), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 50/173 (28%), Positives = 83/173 (47%), Gaps = 16/173 (9%)

Query: 19  KVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMVNLQVK-GKPVHLHIWDTAGQDD 77
           K++L+G+   GKTS L  +AD +F  ++  TV   + V    +  K + L IWDTAGQ+ 
Sbjct: 24  KLLLIGNSSVGKTSFLFRYADDSFTPAFVSTVGIDFKVKTVYRHDKRIKLQIWDTAGQER 83

Query: 78  YDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVNHFC-KKVPIIVVGCKTDLCKD 136
           Y  +   +Y  A   LL +D+ +  SF  +   W  ++  +      +I+VG K DL  +
Sbjct: 84  YRTITTAYYRGAMGFLLMYDIANQESFAAV-QDWATQIKTYSWDNAQVILVGNKCDLEDE 142

Query: 137 KSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNVHAVFQEAAEV 189
           +             V    G+ +A  +G   + E SA+ + NV  VF+   +V
Sbjct: 143 R------------VVPAEDGRRLADDLG-FEFFEASAKENINVKQVFERLVDV 182


>2ERY-A nrPDB
          Length = 172

 Score = 73.6 bits (179), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 49/162 (30%), Positives = 73/162 (45%), Gaps = 16/162 (9%)

Query: 30  KTSLLMVFADGAFPESYTPTVFERYMVNLQVKGKPVHLHIWDTAGQDDYDRLRPLFYPDA 89
           K++L + F    F   Y PT+ + Y     +  +   L I DTAGQ+++  +R  +    
Sbjct: 18  KSALTIQFIQSYFVTDYDPTIEDSYTKQCVIDDRAARLDILDTAGQEEFGAMREQYMRTG 77

Query: 90  SVLLLCFDVTSPNSFDNI--FNRWYPEVNHFCKKVPIIVVGCKTDLCKDKSLVNKLRRNG 147
              LL F VT   SF+ I  F R    V     + P+I++G K DL   +          
Sbjct: 78  EGFLLVFSVTDRGSFEEIYKFQRQILRVKD-RDEFPMILIGNKADLDHQRQ--------- 127

Query: 148 LEPVTYHRGQEMARSVGAVAYLECSARLHDNVHAVFQEAAEV 189
              VT   GQ++AR +  V Y+E SA++  NV   F E   V
Sbjct: 128 ---VTQEEGQQLARQL-KVTYMEASAKIRMNVDQAFHELVRV 165


>2BMD-A nrPDB
          Length = 186

 Score = 72.8 bits (177), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 52/178 (29%), Positives = 85/178 (47%), Gaps = 20/178 (11%)

Query: 19  KVVLVGDGGCGKTSLLMVFADGAFPESYTPTV---FERYMVNLQVKGKPVHLHIWDTAGQ 75
           K +++G+ G GK+ LL  F +  F +    T+   F   ++N  V GK V L IWDTAGQ
Sbjct: 12  KFLVIGNAGTGKSCLLHQFIEKKFKDDSNHTIGVEFGSKIIN--VGGKYVKLQIWDTAGQ 69

Query: 76  DDYDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVNHFC-KKVPIIVVGCKTDLC 134
           + +  +   +Y  A+  LL +D+TS  +++ + N W  +      + + II+ G K DL 
Sbjct: 70  ERFRSVTRSYYRGAAGALLVYDITSRETYNALTN-WLTDARMLASQNIVIILCGNKKDLD 128

Query: 135 KDKSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNVHAVFQEAAEVALS 192
            D+             VT+      A+    + +LE SA   +NV   F + A   L+
Sbjct: 129 ADR------------EVTFLEASRFAQE-NELMFLETSALTGENVEEAFVQCARKILN 173


>2ERX-A nrPDB
          Length = 172

 Score = 72.8 bits (177), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 48/169 (28%), Positives = 77/169 (45%), Gaps = 15/169 (8%)

Query: 19  KVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMVNLQVKGKPVHLHIWDTAGQDDY 78
           +V + G GG GK+SL++ F  G F ESY PTV + Y   +        L I DT G   +
Sbjct: 5   RVAVFGAGGVGKSSLVLRFVKGTFRESYIPTVEDTYRQVISCDKSICTLQITDTTGSHQF 64

Query: 79  DRLRPLFYPDASVLLLCFDVTSPNSFDNI--FNRWYPEVNHFCKKVPIIVVGCKTDLCKD 136
             ++ L        +L + +TS  S + +        E+    + +PI++VG K D    
Sbjct: 65  PAMQRLSISKGHAFILVYSITSRQSLEELKPIYEQICEIKGDVESIPIMLVGNKCDESPS 124

Query: 137 KSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNVHAVFQE 185
           +             V     + +AR+    A++E SA+L+ NV  +FQE
Sbjct: 125 RE------------VQSSEAEALART-WKCAFMETSAKLNHNVKELFQE 160


>4DJT-A nrPDB
          Length = 218

 Score = 72.8 bits (177), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 53/176 (30%), Positives = 80/176 (45%), Gaps = 17/176 (9%)

Query: 17  SVKVVLVGDGGCGKTSLLMVFADGAFPESYTPTV--FERYMVNLQVKGKPVHLHIWDTAG 74
           + K+ L+GDGG GKT+ +    DG F ++Y  TV      +  L  +G  +  ++WDTAG
Sbjct: 11  TYKICLIGDGGVGKTTYINRVLDGRFEKNYNATVGAVNHPVTFLDDQGNVIKFNVWDTAG 70

Query: 75  QDDYDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVNHFC-KKVPIIVVGCKTDL 133
           Q+    L+ ++Y  AS  +L FDVTS  +  N+  RW  E       + PI+V   K D+
Sbjct: 71  QEKKAVLKDVYYIGASGAILFFDVTSRITCQNL-ARWVKEFQAVVGNEAPIVVCANKIDI 129

Query: 134 CKDKSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNVHAVFQEAAEV 189
              + +  KL    L+   Y              Y E SA+   N    F   A +
Sbjct: 130 KNRQKISKKLVMEVLKGKNYE-------------YFEISAKTAHNFGLPFLHLARI 172


>4KYI-B nrPDB
          Length = 170

 Score = 72.4 bits (176), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 46/172 (26%), Positives = 81/172 (47%), Gaps = 16/172 (9%)

Query: 19  KVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMVN-LQVKGKPVHLHIWDTAGQDD 77
           K+VL+G+   GK+SL++ F  G F E    T+   ++   + +    V   IWDTAG + 
Sbjct: 11  KLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDTTVKFEIWDTAGLER 70

Query: 78  YDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVNHFCK-KVPIIVVGCKTDLCKD 136
           Y  L P++Y  A   ++ +D+T+ ++F    N W  E+       + I + G K DL   
Sbjct: 71  YHSLAPMYYRGAQAAIVVYDITNTDTFARAKN-WVKELQRQASPNIVIALAGNKADLASK 129

Query: 137 KSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNVHAVFQEAAE 188
           ++            V +   Q  A    ++ ++E SA+   NV+ +F   A+
Sbjct: 130 RA------------VEFQEAQAYADD-NSLLFMETSAKTAMNVNEIFMAIAK 168


>2HEI-A nrPDB
          Length = 179

 Score = 72.0 bits (175), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 46/167 (27%), Positives = 78/167 (46%), Gaps = 16/167 (9%)

Query: 19  KVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMV-NLQVKGKPVHLHIWDTAGQDD 77
           K+VL+G+   GK+SL++ F  G F E    T+   ++  ++ +    V   IWDTAGQ+ 
Sbjct: 10  KLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQSVCLDDTTVKFEIWDTAGQER 69

Query: 78  YDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVNHFCK-KVPIIVVGCKTDLCKD 136
           Y  L P++Y  A   ++ +D+T+  +F      W  E+       + I + G K DL   
Sbjct: 70  YHSLAPMYYRGAQAAIVVYDITNQETFARA-KTWVKELQRQASPSIVIALAGNKADLANK 128

Query: 137 KSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNVHAVF 183
           +             V Y   Q  A    ++ ++E SA+   NV+ +F
Sbjct: 129 R------------MVEYEEAQAYADD-NSLLFMETSAKTAMNVNDLF 162


>6HUF-A nrPDB
          Length = 182

 Score = 70.9 bits (172), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 43/123 (34%), Positives = 66/123 (53%), Gaps = 4/123 (3%)

Query: 18  VKVVLVGDGGCGKTSLLMVFADGAFPESYTPTV-FERYMVNLQVKGKPVHLHIWDTAGQD 76
           +K + +GD G GKTS+L  + DG F   +  TV  +     +    K + L +WDTAG +
Sbjct: 10  IKFLALGDSGVGKTSVLYQYTDGKFNSKFITTVGIDFREKTIYRNDKRIKLQLWDTAGLE 69

Query: 77  DYDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEV-NHFCKKVPIIVV-GCKTDLC 134
            +  L   F+ DA   LL FD+T+  SF N+ N W  ++  H   + P IV+ G K+DL 
Sbjct: 70  RFRSLTTAFFRDAMGFLLLFDLTNEESFLNVRN-WISQLKTHAYSENPDIVLCGNKSDLE 128

Query: 135 KDK 137
            ++
Sbjct: 129 DER 131


>3RWM-B nrPDB
          Length = 185

 Score = 69.7 bits (169), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 49/169 (28%), Positives = 77/169 (45%), Gaps = 16/169 (9%)

Query: 19  KVVLVGDGGCGKTSLLMVFADGAFP-ESYTPTVFERYMVNLQVKGKPVHLHIWDTAGQDD 77
           K+VL+GD G GK++LL  F    F  ES +    E     ++V+ K +   IWDTAG + 
Sbjct: 12  KIVLIGDSGVGKSNLLSRFTTDEFNIESKSTIGVEFATRTIEVENKKIKAQIWDTAGLER 71

Query: 78  YDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVNHFC-KKVPIIVVGCKTDLCKD 136
           Y  +   +Y  A   L+ +D++  +S++N  N W  E+       V + ++G K+DL   
Sbjct: 72  YRAITSAYYRGAVGALIVYDISKSSSYENC-NHWLTELRENADDNVAVGLIGNKSDLAH- 129

Query: 137 KSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNVHAVFQE 185
                      L  V     +  A     + + E SA   DNV   F+E
Sbjct: 130 -----------LRAVPTDEAKNFAME-NQMLFTETSALNSDNVDKAFRE 166


>2O52-A nrPDB
          Length = 200

 Score = 68.6 bits (166), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 51/178 (28%), Positives = 81/178 (45%), Gaps = 20/178 (11%)

Query: 19  KVVLVGDGGCGKTSLLMVFADGAFPESYTPTV---FERYMVNLQVKGKPVHLHIWDTAGQ 75
           K +++G  G GK+ LL  F +  F +    T+   F   +VN  V GK V L IWDTAGQ
Sbjct: 27  KFLVIGSAGTGKSCLLHQFIENKFKQDSNHTIGVEFGSRVVN--VGGKTVKLQIWDTAGQ 84

Query: 76  DDYDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVNHFCK-KVPIIVVGCKTDLC 134
           + +  +   +Y  A+  LL +D+TS  ++ N    W  +        + +I+ G K DL 
Sbjct: 85  ERFRSVTRSYYRGAAGALLVYDITSRETY-NSLAAWLTDARTLASPNIVVILCGNKKDLD 143

Query: 135 KDKSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNVHAVFQEAAEVALS 192
            ++             VT+      A+    + +LE SA   +NV   F + A   L+
Sbjct: 144 PER------------EVTFLEASRFAQE-NELMFLETSALTGENVEEAFLKCARTILN 188


>3TSO-A nrPDB
          Length = 178

 Score = 67.8 bits (164), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 48/168 (28%), Positives = 75/168 (44%), Gaps = 16/168 (9%)

Query: 19  KVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMVNLQVKGKP-VHLHIWDTAGQDD 77
           KVVL+G+ G GKT+LL  F    F      T+   +     + G   V   IWDTAG + 
Sbjct: 12  KVVLIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVMLGTAAVKAQIWDTAGLER 71

Query: 78  YDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEV-NHFCKKVPIIVVGCKTDLCKD 136
           Y  +   +Y  A   LL FD+T   ++  +  RW  E+ +H    + +++VG K+DL + 
Sbjct: 72  YRAITSAYYRGAVGALLVFDLTKHQTY-AVVERWLKELYDHAEATIVVMLVGNKSDLSQA 130

Query: 137 KSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNVHAVFQ 184
           + +  +  R             M      + +LE SA    NV   F+
Sbjct: 131 REVPTEEAR-------------MFAENNGLLFLETSALDSTNVELAFE 165


>3E5H-A nrPDB
          Length = 178

 Score = 65.5 bits (158), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 41/125 (32%), Positives = 68/125 (54%), Gaps = 7/125 (5%)

Query: 15  VRSVKVVLVGDGGCGKTSLLMVFADGAFPESYTPTV-FERYMVNLQVKGK-PVHLHIWDT 72
           +R +K+V++GDG  GKTSL   FA   F + Y  T+  + ++  + + G   V L IWD 
Sbjct: 4   MRQLKIVVLGDGASGKTSLTTCFAQETFGKQYKQTIGLDFFLRRITLPGNLNVTLQIWDI 63

Query: 73  AGQDDYDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWY---PEVNHFCKKVPII-VVG 128
            GQ    ++   +   A  +LL +D+T+  SF+N+   WY    +V+   +  P++ +VG
Sbjct: 64  GGQTIGGKMLDKYIYGAQGVLLVYDITNYQSFENL-EDWYTVVKKVSEESETQPLVALVG 122

Query: 129 CKTDL 133
            K DL
Sbjct: 123 NKIDL 127


>5XC3-A nrPDB
          Length = 176

 Score = 64.7 bits (156), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 39/122 (31%), Positives = 67/122 (54%), Gaps = 6/122 (4%)

Query: 19  KVVLVGDGGCGKTSLLMVFADGAFPESYTPTV---FERYMVNLQVKGKPVHLHIWDTAGQ 75
           K++L+G  G GK+S++  F       + +PT+   F    V +   GK + L+IWDTAGQ
Sbjct: 7   KIILIGSSGVGKSSIVHQFLFNRKISNVSPTIGAAFASKQV-IAKNGKTLKLNIWDTAGQ 65

Query: 76  DDYDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVNHFCKKV-PIIVVGCKTDLC 134
           + +  +  ++Y ++   L+ FDVT   SFD+++  W  ++   C     I+VV  K D+ 
Sbjct: 66  ERFRSITKMYYTNSLGCLVVFDVTDRESFDDVY-YWINDLRINCHTTYYILVVANKIDID 124

Query: 135 KD 136
           K+
Sbjct: 125 KN 126


>3RAP-R nrPDB
          Length = 167

 Score = 61.2 bits (147), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 34/106 (32%), Positives = 55/106 (51%), Gaps = 3/106 (2%)

Query: 30  KTSLLMVFADGAFPESYTPTVFERYMVNLQVKGKPVHLHIWDTAGQDDYDRLRPLFYPDA 89
           K++L + F  G F E Y PT+ + Y   ++V   P  L I DTAG + +  +R L+  + 
Sbjct: 16  KSALTVQFVTGTFIEKYDPTIEDFYRKEIEVDSSPSVLEILDTAGTEQFASMRDLYIKNG 75

Query: 90  SVLLLCFDVTSPNSFDNI--FNRWYPEVNHFCKKVPIIVVGCKTDL 133
              +L + + +  SF +I         V  + +KVP+I+VG K DL
Sbjct: 76  QGFILVYSLVNQQSFQDIKPMRDQIIRVKRY-EKVPVILVGNKVDL 120


>1Z06-A nrPDB
          Length = 189

 Score = 61.2 bits (147), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 40/134 (29%), Positives = 67/134 (50%), Gaps = 11/134 (8%)

Query: 8   GEEAPPGVRS--VKVVLVGDGGCGKTSLLMVFADGAFPESYTPTV---FERYMVNLQVKG 62
           G   P G RS   K++++GD   GKT L   F  G FP+    T+   F    V+  + G
Sbjct: 9   GSLVPRGSRSRIFKIIVIGDSNVGKTCLTYRFCAGRFPDRTEATIGVDFRERAVD--IDG 66

Query: 63  KPVHLHIWDTAGQDDYDR-LRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVNH--FC 119
           + + + +WDTAGQ+ + + +   +Y +   ++  +D+T+  SF ++   W  E       
Sbjct: 67  ERIKIQLWDTAGQERFRKSMVQHYYRNVHAVVFVYDMTNMASFHSL-PAWIEECKQHLLA 125

Query: 120 KKVPIIVVGCKTDL 133
             +P I+VG K DL
Sbjct: 126 NDIPRILVGNKCDL 139


>2G77-B nrPDB
          Length = 198

 Score = 60.8 bits (146), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 39/134 (29%), Positives = 67/134 (50%), Gaps = 9/134 (6%)

Query: 6   AAGEEAPPGVRSVKVVLVGDGGCGKTSLLMVFADGAFPESYTPTV---FERYMVNLQVKG 62
           A+G   P   R  K++++GD   GKT L   F  G FP+    T+   F    V+  + G
Sbjct: 18  ASGCLPPARSRIFKIIVIGDSNVGKTCLTYRFCAGRFPDRTEATIGVDFRERAVD--IDG 75

Query: 63  KPVHLHIWDTAGQDDYDR-LRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVNH--FC 119
           + + + +WDTAGQ+ + + +   +Y +   ++  +D+T+  SF ++   W  E       
Sbjct: 76  ERIKIQLWDTAGQERFRKSMVQHYYRNVHAVVFVYDMTNMASFHSL-PAWIEECKQHLLA 134

Query: 120 KKVPIIVVGCKTDL 133
             +P I+VG K DL
Sbjct: 135 NDIPRILVGNKCDL 148


>2FN4-A nrPDB
          Length = 181

 Score = 60.8 bits (146), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 52/179 (29%), Positives = 83/179 (46%), Gaps = 22/179 (12%)

Query: 12  PPGVRSVKVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMVNLQVKGKPVHLHIWD 71
           PP   + K+V+VG GG GK++L + F    F   Y PT+ + Y     V G P  L I D
Sbjct: 4   PPPSETHKLVVVGGGGVGKSALTIQFIQSYFVSDYDPTIEDSYTKICSVDGIPARLDILD 63

Query: 72  TAGQDDYDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVNHFCKK--VPIIVVGC 129
           TAGQ+++  +R  +       LL F +    SF+ +  + + ++     +   P+++VG 
Sbjct: 64  TAGQEEFGAMREQYMRAGHGFLLVFAINDRQSFNEV-GKLFTQILRVKDRDDFPVVLVGN 122

Query: 130 KTDLCKDKSLVNKLRRNGLEPVTYHRGQEMARSVGA---VAYLECSARLHDNVHAVFQE 185
           K DL   + +                 +  A + GA   VAY E SA+L  NV   F++
Sbjct: 123 KADLESQRQV----------------PRSEASAFGASHHVAYFEASAKLRLNVDEAFEQ 165


>5WDQ-A nrPDB
          Length = 170

 Score = 60.1 bits (144), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 40/156 (25%), Positives = 71/156 (45%), Gaps = 17/156 (10%)

Query: 30  KTSLLMVFADGAFPESYTPTVFERYMVNLQVKGKPVHLHIWDTAGQDDYDRLRPLFYPDA 89
           K++L +      F + Y PT+ + Y   + + G+   L I DTAGQ++Y  +R  +    
Sbjct: 20  KSALTIQLIQNHFVDEYDPTIEDSYRKQVVIDGETCLLDILDTAGQEEYSAMRDQYMRTG 79

Query: 90  SVLLLCFDVTSPNSFDNIFNRWYPEVNHF--CKKVPIIVVGCKTDLCKDKSLVNKLRRNG 147
              L  F + +  SF++I +++  ++        VP+++VG K D               
Sbjct: 80  EGFLCVFAINNTKSFEDI-HQYREQIKRVKDSDDVPMVLVGNKCDA-------------A 125

Query: 148 LEPVTYHRGQEMARSVGAVAYLECSARLHDNVHAVF 183
              V   + Q++ARS G + Y+E SA+    V   F
Sbjct: 126 ARTVESRQAQDLARSYG-IPYIETSAKTRQGVEDAF 160


>2GF0-A nrPDB
          Length = 199

 Score = 57.8 bits (138), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 39/158 (24%), Positives = 70/158 (44%), Gaps = 16/158 (10%)

Query: 30  KTSLLMVFADGAFPESYTPTVFERYMVNLQVKGKPVHLHIWDTAGQDDYDRLRPLFYPDA 89
           K+SL++ F  G F ++Y PT+ + Y   +        L I DT G   +  ++ L     
Sbjct: 21  KSSLVLRFVKGTFRDTYIPTIEDTYRQVISCDKSVCTLQITDTTGSHQFPAMQRLSISKG 80

Query: 90  SVLLLCFDVTSPNSFDNI--FNRWYPEVNHFCKKVPIIVVGCKTDLCKDKSLVNKLRRNG 147
              +L F VTS  S + +    +   ++    + +P+++VG K D  +            
Sbjct: 81  HAFILVFSVTSKQSLEELGPIYKLIVQIKGSVEDIPVMLVGNKCDETQ------------ 128

Query: 148 LEPVTYHRGQEMARSVGAVAYLECSARLHDNVHAVFQE 185
              V     Q +A+     A++E SA+++ NV  +FQE
Sbjct: 129 -REVDTREAQAVAQE-WKCAFMETSAKMNYNVKELFQE 164


>5WDR-A nrPDB
          Length = 171

 Score = 57.4 bits (137), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 43/156 (27%), Positives = 70/156 (44%), Gaps = 16/156 (10%)

Query: 30  KTSLLMVFADGAFPESYTPTVFERYMVNLQVKGKPVHLHIWDTAGQDDYDRLRPLFYPDA 89
           K++L +      F   Y PT+ + Y  ++ +  +   L I DTAGQ+DY  +R  +    
Sbjct: 20  KSALTIQLIQQHFVTEYDPTIEDSYRKHVSIDDEACLLDILDTAGQEDYSAMRDQYMRTG 79

Query: 90  SVLLLCFDVTSPNSFDNI--FNRWYPEVNHFCKKVPIIVVGCKTDLCKDKSLVNKLRRNG 147
              L  + + S  S D I  F      V     +VP+I+VG K DL + +          
Sbjct: 80  EGFLCVYSIDSQQSLDEIHSFREQILRVKD-QDEVPMILVGNKCDLEEHR---------- 128

Query: 148 LEPVTYHRGQEMARSVGAVAYLECSARLHDNVHAVF 183
              V+   GQ +A+S  ++ ++E SA+   NV   F
Sbjct: 129 --EVSTEAGQAVAKSY-SIPFMETSAKKRINVEEAF 161


>2ATV-A nrPDB
          Length = 196

 Score = 57.4 bits (137), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 49/173 (28%), Positives = 81/173 (46%), Gaps = 20/173 (11%)

Query: 17  SVKVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMVNLQVKGKPVHLHIWDTAGQD 76
            VK+ + G  G GK++L++ F    F   Y PT+   Y     +  + V + I DTAGQ+
Sbjct: 28  EVKLAIFGRAGVGKSALVVRFLTKRFIWEYDPTLESTYRHQATIDDEVVSMEILDTAGQE 87

Query: 77  D-YDRLRPLFYPDASVLLLCFDVTSPNSFDNI--FNRWYPEVNHFCKKVPIIVVGCKTDL 133
           D   R   + + +  VL+  +D+T   SF+ +        E+    K V +I+VG K DL
Sbjct: 88  DTIQREGHMRWGEGFVLV--YDITDRGSFEEVLPLKNILDEIKK-PKNVTLILVGNKADL 144

Query: 134 CKDKSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHD-NVHAVFQE 185
              +             V+   G+++A  + A A+ ECSA   + N+  +F E
Sbjct: 145 DHSRQ------------VSTEEGEKLATEL-ACAFYECSACTGEGNITEIFYE 184


>3CLV-A nrPDB
          Length = 208

 Score = 57.0 bits (136), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 49/210 (23%), Positives = 82/210 (39%), Gaps = 54/210 (25%)

Query: 17  SVKVVLVGDGGCGKTSLLMVFADGAFPESYTPTV---FERYMVNLQVKGK---------- 63
           S K VL+G+   GK+S+++      F E+   T+   F  Y+VNL               
Sbjct: 7   SYKTVLLGESSVGKSSIVLRLTKDTFHENTNTTIGASFCTYVVNLNDINIKNNSNNEKNN 66

Query: 64  -------------------------PVHLHIWDTAGQDDYDRLRPLFYPDASVLLLCFDV 98
                                     +   IWDTAGQ+ Y  + PL+Y  A+  ++ FD+
Sbjct: 67  NINSINDDNNVIITNQHNNYNENLCNIKFDIWDTAGQERYASIVPLYYRGATCAIVVFDI 126

Query: 99  TSPNSFDNIFNRWYPEVNHFCKKVPIIVVGCKTDLCKDKSLVNKLRRNGLEPVTYHRGQE 158
           ++ N+ D     W  ++        II+V  K D        NK + + LE   Y +   
Sbjct: 127 SNSNTLDRA-KTWVNQL-KISSNYIIILVANKIDK-------NKFQVDILEVQKYAQDNN 177

Query: 159 MARSVGAVAYLECSARLHDNVHAVFQEAAE 188
           +        +++ SA+   N+  +F   AE
Sbjct: 178 L-------LFIQTSAKTGTNIKNIFYMLAE 200


>3CON-A nrPDB
          Length = 190

 Score = 57.0 bits (136), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 40/156 (25%), Positives = 69/156 (44%), Gaps = 17/156 (10%)

Query: 30  KTSLLMVFADGAFPESYTPTVFERYMVNLQVKGKPVHLHIWDTAGQDDYDRLRPLFYPDA 89
           K++L +      F + Y PT+ + Y   + + G+   L I DTAGQ++Y  +R  +    
Sbjct: 34  KSALTIQLIQNHFVDEYDPTIEDSYRKQVVIDGETCLLDILDTAGQEEYSAMRDQYMRTG 93

Query: 90  SVLLLCFDVTSPNSFDNIFNRWYPEVNHF--CKKVPIIVVGCKTDLCKDKSLVNKLRRNG 147
              L  F + +  SF +I N +  ++        VP+++VG K DL              
Sbjct: 94  EGFLCVFAINNSKSFADI-NLYREQIKRVKDSDDVPMVLVGNKCDL-------------P 139

Query: 148 LEPVTYHRGQEMARSVGAVAYLECSARLHDNVHAVF 183
              V   +  E+A+S G + ++E SA+    V   F
Sbjct: 140 TRTVDTKQAHELAKSYG-IPFIETSAKTRQGVEDAF 174


>5UHV-A nrPDB
          Length = 166

 Score = 56.6 bits (135), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 40/156 (25%), Positives = 69/156 (44%), Gaps = 17/156 (10%)

Query: 30  KTSLLMVFADGAFPESYTPTVFERYMVNLQVKGKPVHLHIWDTAGQDDYDRLRPLFYPDA 89
           K++L +      F + Y PT+ + Y   + + G+   L I DTAGQ++Y  +R  +    
Sbjct: 16  KSALTIQLIQNHFVDEYDPTIEDSYRKQVVIDGETCLLDILDTAGQEEYSAMRDQYMRTG 75

Query: 90  SVLLLCFDVTSPNSFDNIFNRWYPEVNHF--CKKVPIIVVGCKTDLCKDKSLVNKLRRNG 147
              L  F + +  SF +I N +  ++        VP+++VG K DL              
Sbjct: 76  EGFLCVFAINNSKSFADI-NLYREQIKRVKDSDDVPMVLVGNKCDL-------------P 121

Query: 148 LEPVTYHRGQEMARSVGAVAYLECSARLHDNVHAVF 183
              V   +  E+A+S G + ++E SA+    V   F
Sbjct: 122 TRTVDTKQAHELAKSYG-IPFIETSAKTRQGVEDAF 156


>4WA7-A nrPDB
          Length = 170

 Score = 55.5 bits (132), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 39/156 (25%), Positives = 71/156 (45%), Gaps = 17/156 (10%)

Query: 30  KTSLLMVFADGAFPESYTPTVFERYMVNLQVKGKPVHLHIWDTAGQDDYDRLRPLFYPDA 89
           K++L +      F + Y PT+ + Y   + + G+   L I DTAG ++Y  +R  +    
Sbjct: 17  KSALTIQLIQNHFVDEYDPTIEDSYRKQVVIDGETCLLDILDTAGLEEYSAMRDQYMRTG 76

Query: 90  SVLLLCFDVTSPNSFDNIFNRWYPEVNHF--CKKVPIIVVGCKTDLCKDKSLVNKLRRNG 147
              L  F + +  SF++I + +  ++      + VP+++VG K DL              
Sbjct: 77  EGFLCVFAINNTKSFEDI-HHYREQIKRVKDSEDVPMVLVGNKCDLPS------------ 123

Query: 148 LEPVTYHRGQEMARSVGAVAYLECSARLHDNVHAVF 183
              V   + Q++ARS G + ++E SA+    V   F
Sbjct: 124 -RTVDTKQAQDLARSYG-IPFIETSAKTRQGVDDAF 157


>3CBQ-A nrPDB
          Length = 195

 Score = 55.5 bits (132), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 55/188 (29%), Positives = 82/188 (43%), Gaps = 28/188 (14%)

Query: 19  KVVLVGDGGCGKTSLLMVFA----DGAF-PESYTPTVFERYMVNLQVKGKPVHLHIWDTA 73
           KV+LVG+ G GK++L   F     D A  PE+   T   R MV+ +     V L ++D  
Sbjct: 25  KVMLVGESGVGKSTLAGTFGGLQGDSAHEPENPEDTYERRIMVDKE----EVTLVVYDIW 80

Query: 74  GQDDYDR-LRPLFYPDASVLLLCFDVTSPNSFDNI---FNRWYPEVNHFCKKVPIIVVGC 129
            Q D    LR          L+ F VT   SF  +     R      H    +P+I+VG 
Sbjct: 81  EQGDAGGWLRDHCLQTGDAFLIVFSVTDRRSFSKVPETLLRLRAGRPHH--DLPVILVGN 138

Query: 130 KTDLCKDKSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNVHAVFQEAAEV 189
           K+DL + +             V+   G+ +A ++ +  ++E SA LH N   +F+ A   
Sbjct: 139 KSDLARSRE------------VSLEEGRHLAGTL-SCKHIETSAALHHNTRELFEGAVRQ 185

Query: 190 ALSSRGRN 197
               RGRN
Sbjct: 186 IRLRRGRN 193


>3PIR-A nrPDB
          Length = 183

 Score = 55.1 bits (131), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 42/167 (25%), Positives = 77/167 (46%), Gaps = 25/167 (14%)

Query: 30  KTSLLMVFADGAFPESYTPTVFERYMVNLQVKGKPVHLHIWDTAGQDDYDRLRPLFYPDA 89
           K++L + F    F   Y PT+ + Y+ + ++  +   L + DTAGQ+++  +R  +    
Sbjct: 31  KSALTIQFFQKIFVPEYDPTIEDSYLKHTEIDNQWAILDVLDTAGQEEFSAMREQYMRTG 90

Query: 90  SVLLLCFDVTSPNSFDNIFNRWYPEVNHFCKK--VPIIVVGCKTDLCKDKSLVNKLRRNG 147
              L+ + VT   SF+++ +R++  +     +   P+I+V  K DL              
Sbjct: 91  DGFLIVYSVTDKASFEHV-DRFHQLILRVKDRESFPMILVANKVDLMH------------ 137

Query: 148 LEPVTYHRGQEMARSVGAVAYLECSAR---------LHDNVHAVFQE 185
           L  VT  +G+EMA     + Y+E SA+          HD V  + Q+
Sbjct: 138 LRKVTRDQGKEMATKYN-IPYIETSAKDPPLNVDKTFHDLVRVIRQQ 183


>4CZ2-A nrPDB
          Length = 230

 Score = 54.3 bits (129), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 42/175 (24%), Positives = 83/175 (47%), Gaps = 22/175 (12%)

Query: 19  KVVLVGDGGCGKTSLLMVFADGAFPESYTPTV---FERYMVNLQVKGKPVHLHIWDTAGQ 75
           KV+++G+ G GKTS++  +    F + Y  T+   F   ++N   +   V L +WD AG 
Sbjct: 32  KVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVLNWDSR-TLVRLQLWDIAGL 90

Query: 76  DDYDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVN---HFCKKVPIIVVGCKTD 132
           + +  +  ++Y +A    + FD++  ++F+ +  +W  +++   H     PI  V     
Sbjct: 91  ERFGNMTRVYYKEAMGAFVVFDISRSSTFEAVL-KWKSDLDSKVHLPNGSPIPAV----- 144

Query: 133 LCKDKSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNVHAVFQEAA 187
                 L NK  +N    ++  +  +  +  G   + E SA+  DN++   +EAA
Sbjct: 145 -----LLANKCDQNKDSSMSPSQMDQFCKEHGFAGWFETSAK--DNIN--IEEAA 190


>6FF8-A nrPDB
          Length = 181

 Score = 53.5 bits (127), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 33/128 (25%), Positives = 66/128 (51%), Gaps = 10/128 (7%)

Query: 19  KVVLVGDGGCGKTSLLMVFADGAFPESYTPTV---FERYMVNLQVKGKPVHLHIWDTAGQ 75
           KV+++G+ G GKTS++  +    F + Y  T+   F   ++N   +   V L +WD AG 
Sbjct: 10  KVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVLNWDSR-TLVRLQLWDIAGL 68

Query: 76  DDYDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVN---HFCKKVPI--IVVGCK 130
           + +  +  ++Y +A    + FD++  ++F+ +  +W  +++   H     PI  +++  K
Sbjct: 69  ERFGNMTRVYYKEAVGAFVVFDISRSSTFEAVL-KWKSDLDSKVHLPNGSPIPAVLLANK 127

Query: 131 TDLCKDKS 138
            D  KD S
Sbjct: 128 CDQNKDSS 135


>5C1S-A nrPDB
          Length = 391

 Score = 52.4 bits (124), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 36/131 (27%), Positives = 62/131 (47%), Gaps = 9/131 (6%)

Query: 14  GVRSVKVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMVNLQVKGKPVHLHIWDTA 73
           G + +++++VG  G GKT+L        F ES+     E    ++Q+    + + I D A
Sbjct: 59  GKKEIRLLVVGSSGVGKTTLC-----DCFFESHQSQGEETREKHVQIDNDFIRISISDIA 113

Query: 74  GQDD-YDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVNHFCK-KVPIIVVGCKT 131
           GQ   Y    P  Y     +L+ +D+T   SF ++   W P++  +C     II++G K 
Sbjct: 114 GQQSFYACDNP--YDGYDAILVMYDITELKSFTDLKTMWLPDIFLYCNIDTQIIIIGNKK 171

Query: 132 DLCKDKSLVNK 142
           D   D+ +  K
Sbjct: 172 DQEIDRIITRK 182



 Score = 47.4 bits (111), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 28/117 (23%), Positives = 56/117 (47%), Gaps = 5/117 (4%)

Query: 18  VKVVLVGDGGCGKTSLLMVFA-DGAFPESYTPTVFERYMVNLQVKGKPVHLHIWDTAGQD 76
           +++++VGD   GKT+ +  FA        +   +  R+    +++     + + D    +
Sbjct: 223 IRMLMVGDQNVGKTTFIRKFALQDPTGHDFMNAITTRF----EMEKIKYEIIMIDWGFYN 278

Query: 77  DYDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVNHFCKKVPIIVVGCKTDL 133
              +  P        +L+ +D+T+  SF NI  ++YP +N+    V  ++VG KTDL
Sbjct: 279 KLLQTNPAISRTIEAILIVYDITNEESFQNIHRKYYPLINNKFSDVAGVIVGYKTDL 335


>3DPU-A nrPDB
          Length = 535

 Score = 48.9 bits (115), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 40/145 (27%), Positives = 62/145 (42%), Gaps = 22/145 (15%)

Query: 1   MTAAQAAGEEAPPGVRSVKVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMVNLQV 60
           +  A++ GE A   ++ +KV L+GDG  GKTSLL         E++ P   + + +N+  
Sbjct: 26  IEEARSKGE-ALVHLQEIKVHLIGDGMAGKTSLLKQL----IGETFDPKESQTHGLNVVT 80

Query: 61  KGKP-------------VHLHIWDTAGQDDYDRLRPLFYPDASVLLLCFDVTSPNSFDNI 107
           K  P                H WD  GQ+        F   +SV +L  D  +    D+ 
Sbjct: 81  KQAPNIKGLENDDELKECLFHFWDFGGQEIMHASHQFFMTRSSVYMLLLDSRT----DSN 136

Query: 108 FNRWYPEVNHFCKKVPIIVVGCKTD 132
            + W   +  +  K P+IVV  K D
Sbjct: 137 KHYWLRHIEKYGGKSPVIVVMNKID 161


>3Q85-A nrPDB
          Length = 169

 Score = 48.9 bits (115), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 47/176 (26%), Positives = 77/176 (43%), Gaps = 26/176 (14%)

Query: 19  KVVLVGDGGCGKTSLLMVF----ADGAFPESYTPTVFERYMVNLQVKGKPVHLHIWDTAG 74
           KV+LVG+ G GK++L   F     D A     +   +ER ++   V  + V L ++D   
Sbjct: 4   KVMLVGESGVGKSTLAGTFGGLQGDHAHEMENSEDTYERRIM---VDKEEVTLIVYDIWE 60

Query: 75  QDDYDR-LRPLFYPDASVLLLCFDVTSPNSFDNI---FNRWYPEVNHFCKKVPIIVVGCK 130
           Q D    L+          L+ F VT   SF  +     R      H    +P+I+VG K
Sbjct: 61  QGDAGGWLQDHCLQTGDAFLIVFSVTDRRSFSKVPETLLRLRAGRPH--HDLPVILVGNK 118

Query: 131 TDLCKDKSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNVHAVFQEA 186
           +DL + +             V+   G+ +A ++ +  ++E SA LH N   +F+ A
Sbjct: 119 SDLARSR------------EVSLEEGRHLAGTL-SCKHIETSAALHHNTRELFEGA 161


>2NZJ-A nrPDB
          Length = 175

 Score = 48.5 bits (114), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 49/172 (28%), Positives = 74/172 (43%), Gaps = 22/172 (12%)

Query: 19  KVVLVGDGGCGKTSLLMVFA---DGAFPESYTPTVFERYMVNLQVKGKPVHLHIWDTAGQ 75
           +VVL+GD G GKTSL  +FA   +    E     V+ER    L V G+   L + DT   
Sbjct: 6   RVVLLGDPGVGKTSLASLFAGKQERDLHEQLGEDVYER---TLTVDGEDTTLVVVDTWEA 62

Query: 76  DDYDR--LRPLFYPDASVLLLCFDVTSPNSFDNIFN-RWYPEVNHFCKKVPIIVVGCKTD 132
           +  D+   +       S  ++ + +    SF++    R      H    VPII+VG K D
Sbjct: 63  EKLDKSWSQESCLQGGSAYVIVYSIADRGSFESASELRIQLRRTHQADHVPIILVGNKAD 122

Query: 133 LCKDKSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNVHAVFQ 184
           L + +             V+   G+  A  V    ++E SA L  NV  +F+
Sbjct: 123 LARCR------------EVSVEEGRACA-VVFDCKFIETSATLQHNVAELFE 161


>3Q72-A nrPDB
          Length = 166

 Score = 48.1 bits (113), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 49/170 (28%), Positives = 75/170 (44%), Gaps = 21/170 (12%)

Query: 19  KVVLVGDGGCGKTSLLMVFA---DGAFPESYTPTVFERYMVNLQVKGKPVHLHIWDTAGQ 75
           KV+L+G  G GK++L  +F    DG   E+   T ++R +V   V G+   L ++D   Q
Sbjct: 4   KVLLLGAPGVGKSALARIFGGVEDGPEAEAAGHT-YDRSIV---VDGEEASLMVYDIWEQ 59

Query: 76  DDYDRLRPLFYPDASVLLLCFDVTSPNSFDNIFN-RWYPEVNHFCKKVPIIVVGCKTDLC 134
           D    L           ++ + VT   SF+     R           VPII+VG K+DL 
Sbjct: 60  DGGRWLPGHCMAMGDAYVIVYSVTDKGSFEKASELRVQLRRARQTDDVPIILVGNKSDLV 119

Query: 135 KDKSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNVHAVFQ 184
           + +             V+   G+  A  V    ++E SA LH NV A+F+
Sbjct: 120 RSRE------------VSVDEGRACA-VVFDCKFIETSAALHHNVQALFE 156


>6HLU-A nrPDB
          Length = 974

 Score = 47.4 bits (111), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 38/136 (27%), Positives = 57/136 (41%), Gaps = 21/136 (15%)

Query: 10  EAPPGVRSVKVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMVNLQVKGKP----- 64
           EA   ++ +KV L+GDG  GKTSLL         E++ P   + + +N+  K  P     
Sbjct: 473 EALVHLQEIKVHLIGDGMAGKTSLLKQL----IGETFDPKESQTHGLNVVTKQAPNIKGL 528

Query: 65  --------VHLHIWDTAGQDDYDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVN 116
                      H WD  GQ+        F   +SV +L  D  +    D+  + W   + 
Sbjct: 529 ENDDELKECLFHFWDFGGQEIMHASHQFFMTRSSVYMLLLDSRT----DSNKHYWLRHIE 584

Query: 117 HFCKKVPIIVVGCKTD 132
            +  K P+IVV  K D
Sbjct: 585 KYGGKSPVIVVMNKID 600


>3D6T-B nrPDB
          Length = 171

 Score = 47.4 bits (111), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 29/130 (22%), Positives = 57/130 (43%), Gaps = 14/130 (10%)

Query: 18  VKVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMVNLQVKGKPVH----------L 67
           +K+++VG+ G GKT+LL            +    +   V + VK  P+           L
Sbjct: 1   MKLMIVGNTGSGKTTLLQQL----MKTKKSDLGMQSATVGIDVKDWPIQIRDKRKRDLVL 56

Query: 68  HIWDTAGQDDYDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVNHFCKKVPIIVV 127
           ++WD AG++++    P F    ++ L  +D++   +  +    W   +       P+I+V
Sbjct: 57  NVWDFAGREEFYSTHPHFMTQRALYLAVYDLSKGQAEVDAMKPWLFNIKARASSSPVILV 116

Query: 128 GCKTDLCKDK 137
           G   D+  +K
Sbjct: 117 GTHLDVSDEK 126


>4WNR-A nrPDB
          Length = 349

 Score = 46.6 bits (109), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 35/126 (27%), Positives = 51/126 (40%), Gaps = 7/126 (5%)

Query: 8   GEEAPPGVRSVKVVLVGDGGCGKTSLLM-VFADGAFPESYTPTVFERYMVNLQVKGKPVH 66
           GE+ P  +  VKV+LVGDG  GKTSLL  +  +G     +            + K K + 
Sbjct: 34  GEKKP--LNEVKVLLVGDGEAGKTSLLKRLLGEGFDGNEHQTQGINIKKWGFKDKDKEIK 91

Query: 67  LHIWDTAGQDDYDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVNHFCKKVPIIV 126
           ++ WD  GQ+        F    S+ +L  D       D     W   +  F    P++V
Sbjct: 92  VNFWDFGGQEIMHATHQFFLSKRSLYILVLDSRR----DEKAEYWLKHIRSFGGDSPVLV 147

Query: 127 VGCKTD 132
              K D
Sbjct: 148 ALNKID 153


>2AL7-A nrPDB
          Length = 186

 Score = 44.7 bits (104), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 38/149 (25%), Positives = 69/149 (46%), Gaps = 20/149 (13%)

Query: 12  PPGVRS-VKVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMVNLQVKGKPVHLHIW 70
           P G +  +++ LVG    GKT+ + V A G F E   PTV   + +    KG  V + IW
Sbjct: 16  PRGSKEEMELTLVGLQYSGKTTFVNVIASGQFSEDMIPTVG--FNMRKVTKGN-VTIKIW 72

Query: 71  DTAGQDDYDRLRPLFYPDASVLLLCFDV-------TSPNSFDNIFNRWYPEVNHFCKKVP 123
           D  GQ  +  +   +    + ++   D         S N   N+ ++  P++    + +P
Sbjct: 73  DIGGQPRFRSMWERYCRGVNAIVYMIDAADREKIEASRNELHNLLDK--PQL----QGIP 126

Query: 124 IIVVGCKTDL---CKDKSLVNKLRRNGLE 149
           ++V+G K DL     +K L+ K+  + ++
Sbjct: 127 VLVLGNKRDLPNALDEKQLIEKMNLSAIQ 155


>4ILE-A nrPDB
          Length = 184

 Score = 44.3 bits (103), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 36/144 (25%), Positives = 66/144 (45%), Gaps = 19/144 (13%)

Query: 16  RSVKVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMVNLQVKGKPVHLHIWDTAGQ 75
             +++ LVG    GKT+ + V A G F E   PTV   + +    KG  V + +WD  GQ
Sbjct: 21  EEMELTLVGLQYSGKTTFVNVIASGQFNEDMIPTV--GFNMRKITKGN-VTIKLWDIGGQ 77

Query: 76  DDYDRLRPLFYPDASVLLLCFDV-------TSPNSFDNIFNRWYPEVNHFCKKVPIIVVG 128
             +  +   +    S ++   D         S N   N+ ++  P++    + +P++V+G
Sbjct: 78  PRFRSMWERYCRGVSAIVYMVDAADQEKIEASKNELHNLLDK--PQL----QGIPVLVLG 131

Query: 129 CKTDL---CKDKSLVNKLRRNGLE 149
            K DL     +K L+ K+  + ++
Sbjct: 132 NKRDLPGALDEKELIEKMNLSAIQ 155


>2CJW-A nrPDB
          Length = 192

 Score = 43.1 bits (100), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 42/177 (23%), Positives = 77/177 (43%), Gaps = 21/177 (11%)

Query: 14  GVRSVKVVLVGDGGCGKTSLLMVFAD-----GAFPESYTPTVFERYMVNLQVKGKPVHLH 68
           G+   +VVL+G+ G GK++L  +FA       +  E      +ER ++        + L 
Sbjct: 3   GMTYYRVVLIGEQGVGKSTLANIFAGVHDSMDSDCEVLGEDTYERTLMVDGESATIILLD 62

Query: 69  IWDTAGQDDYDRLRPLFYPDASVLLLCFDVTSPNSFDNIFN-RWYPEVNHFCKKVPIIVV 127
           +W+  G++++     +   DA   L+ + +T   SF+     R         + +PII+V
Sbjct: 63  MWENKGENEWLHDHCMQVGDA--YLIVYSITDRASFEKASELRIQLRRARQTEDIPIILV 120

Query: 128 GCKTDLCKDKSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNVHAVFQ 184
           G K+DL +               V+   G+  A  V    ++E SA +  NV  +F+
Sbjct: 121 GNKSDLVR------------CREVSVSEGRACA-VVFDCKFIETSAAVQHNVKELFE 164


>2G3Y-A nrPDB
          Length = 211

 Score = 42.4 bits (98), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 42/180 (23%), Positives = 77/180 (42%), Gaps = 21/180 (11%)

Query: 11  APPGVRSVKVVLVGDGGCGKTSLLMVFAD-----GAFPESYTPTVFERYMVNLQVKGKPV 65
           +  G    +VVL+G+ G GK++L  +FA       +  E      +ER ++        +
Sbjct: 31  SESGNTYYRVVLIGEQGVGKSTLANIFAGVHDSMDSDCEVLGEDTYERTLMVDGESATII 90

Query: 66  HLHIWDTAGQDDYDRLRPLFYPDASVLLLCFDVTSPNSFDNIFN-RWYPEVNHFCKKVPI 124
            L +W+  G++++     +   DA   L+ + +T   SF+     R         + +PI
Sbjct: 91  LLDMWENKGENEWLHDHCMQVGDA--YLIVYSITDRASFEKASELRIQLRRARQTEDIPI 148

Query: 125 IVVGCKTDLCKDKSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNVHAVFQ 184
           I+VG K+DL +               V+   G+  A  V    ++E SA +  NV  +F+
Sbjct: 149 ILVGNKSDLVR------------CREVSVSEGRACA-VVFDCKFIETSAAVQHNVKELFE 195


>3C5C-A nrPDB
          Length = 187

 Score = 41.6 bits (96), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 44/180 (24%), Positives = 74/180 (41%), Gaps = 16/180 (8%)

Query: 14  GVRSVKVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMVNLQVKGKPVHLHIWDTA 73
           G   V + ++G  G GK++L + F    F   Y P + + Y     V  +PVHL + DTA
Sbjct: 18  GPLEVNLAILGRRGAGKSALTVKFLTKRFISEYDPNLEDTYSSEETVDHQPVHLRVMDTA 77

Query: 74  GQDD-YDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYP-EVNHFCKKVPIIVVGCKT 131
             D   +  R L +  A +++   D        + +            + +P +++G K 
Sbjct: 78  DLDTPRNCERYLNWAHAFLVVYSVDSRQSFDSSSSYLELLALHAKETQRSIPALLLGNKL 137

Query: 132 DLCKDKSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLH-DNVHAVFQEAAEVA 190
           D+ + +             VT   G  +A   G + + E SA L  ++V  VF EA   A
Sbjct: 138 DMAQYRQ------------VTKAEGVALAGRFGCL-FFEVSACLDFEHVQHVFHEAVREA 184


>3IHW-A nrPDB
          Length = 184

 Score = 38.9 bits (89), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 41/181 (22%), Positives = 81/181 (44%), Gaps = 19/181 (10%)

Query: 18  VKVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMVNLQVKGKPVHLHIWDTAGQDD 77
           +KV +VG+   GK++L+  +  G + +  +P    R+   + V G+   L I D  G  +
Sbjct: 21  LKVGIVGNLSSGKSALVHRYLTGTYVQEESPE-GGRFKKEIVVDGQSYLLLIRDEGGPPE 79

Query: 78  YDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVNHF--CKKVPIIVVGCKTDLCK 135
              L+   + DA V +  F +    SF  ++N ++  +  F    +VP+++VG +  +  
Sbjct: 80  ---LQFAAWVDAVVFV--FSLEDEISFQTVYN-YFLRLCSFRNASEVPMVLVGTQDAISA 133

Query: 136 DKSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNVHAVFQEAAEVALSSRG 195
               V          +   R ++++  +    Y E  A    NV  VFQ+ A+  ++ R 
Sbjct: 134 ANPRV----------IDDSRARKLSTDLKRCTYYETCATYGLNVERVFQDVAQKVVALRK 183

Query: 196 R 196
           +
Sbjct: 184 K 184


>4C0K-A nrPDB
          Length = 423

 Score = 38.5 bits (88), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 36/129 (27%), Positives = 60/129 (46%), Gaps = 21/129 (16%)

Query: 16  RSV-KVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMVNL-------QVKGKPVHL 67
           RSV K  ++G  G GKT +      G   E     + + +  N+       QV G+  HL
Sbjct: 244 RSVYKCHVIGPKGSGKTGM----CRGFLVEDMHKLIGKEFKTNVVNCINSVQVYGQEKHL 299

Query: 68  HIWDTAGQDDYDRLRPLFYPDASVLLLCFDVTSPNSFD---NIFNRWYPEVNHFCKKVPI 124
            + D   +   D L+P    +  V  L +D ++P SF+    I+ ++Y E      K+P+
Sbjct: 300 ILRDIDVRHALDPLQPQEV-NCDVACLVYDSSNPRSFEYVARIYIKYYAE-----SKIPV 353

Query: 125 IVVGCKTDL 133
           ++VG K D+
Sbjct: 354 MIVGTKCDM 362


>2GJ9-A nrPDB
          Length = 172

 Score = 38.5 bits (88), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 38/134 (28%), Positives = 58/134 (43%), Gaps = 15/134 (11%)

Query: 14  GVRSVKVVLVGDGGCGKTSLLMVFA--DGAFPESYTPTVFERYMVNLQVKGKPVHLHIWD 71
           G   +KVV+ G    GK+SLL   A  + A       T  +    ++ + G P  LHI D
Sbjct: 1   GSHGMKVVIAGRPNAGKSSLLNALAGREAAIVTDIAGTTRDVLREHIHIDGMP--LHIID 58

Query: 72  TAG----QDDYDRLRP----LFYPDASVLLLCFDVTSPNSFDNIFNRWYPE-VNHFCKKV 122
           TAG     D+ +R+           A  +L   D T+ ++ D      +PE +     K+
Sbjct: 59  TAGLREASDEVERIGIERAWQEIEQADRVLFMVDGTTTDAVDPA--EIWPEFIARLPAKL 116

Query: 123 PIIVVGCKTDLCKD 136
           PI VV  K D+  +
Sbjct: 117 PITVVRNKADITGE 130


>3LRP-A nrPDB
          Length = 181

 Score = 37.0 bits (84), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 31/123 (25%), Positives = 55/123 (44%), Gaps = 13/123 (10%)

Query: 16  RSVKVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMVNLQ-VKGKPVHLHIWDTAG 74
           + V++++VG    GKT++L     G    +  PT+      N++ V+ + +   +WD  G
Sbjct: 16  KDVRILMVGLDAAGKTTILYKVKLGEVVTT-IPTI----GFNVETVEFRNISFTVWDVGG 70

Query: 75  QDDYDRLRPL---FYPDASVLLLCFDVTSPNSFDNIFNRWYPEVN-HFCKKVPIIVVGCK 130
           Q   D++RPL   +Y +   L+   D       D+     +  +N    K   I+V   K
Sbjct: 71  Q---DKIRPLWRHYYSNTDGLIFVVDSNDRERIDDAREELHRMINEEELKDAIILVFANK 127

Query: 131 TDL 133
            DL
Sbjct: 128 QDL 130


>4YLG-A nrPDB
          Length = 173

 Score = 37.0 bits (84), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 32/143 (22%), Positives = 62/143 (43%), Gaps = 13/143 (9%)

Query: 14  GVRSVKVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMVNLQ-VKGKPVHLHIWDT 72
           G + +++++VG    GKTS+L     G    +  PT+      N++ V+ K +   +WD 
Sbjct: 10  GKKEMRILMVGLDAAGKTSILYKLKLGEIVTT-IPTIG----FNVETVEYKNISFTVWDV 64

Query: 73  AGQDDYDRLRPL---FYPDASVLLLCFDVTSPNSFDNIFNRWYPEVNH-FCKKVPIIVVG 128
            GQ   D++RPL   +Y +   ++   D    +            +N    +   ++V  
Sbjct: 65  GGQ---DKIRPLWRHYYQNTQAIIFVVDSNDRDRIGEAREELMKMLNEDEMRNAILLVFA 121

Query: 129 CKTDLCKDKSLVNKLRRNGLEPV 151
            K DL +  S+     + GL+ +
Sbjct: 122 NKHDLPQAMSISEVTEKLGLQTI 144


>2YC4-C nrPDB
          Length = 208

 Score = 35.4 bits (80), Expect = 0.016,   Method: Compositional matrix adjust.
 Identities = 34/124 (27%), Positives = 57/124 (45%), Gaps = 10/124 (8%)

Query: 19  KVVLVGDGGCGKTSLLMVFAD--GAFPESYTPTVFERYMV---NLQVKGKPVHLHIWDTA 73
           KV +VG+   GK++L+ +F      F + Y  T     +V    +      V L + DTA
Sbjct: 22  KVAVVGEATVGKSALISMFTSKGSKFLKDYAMTSGVEVVVAPVTIPDTTVSVELFLLDTA 81

Query: 74  GQDDYDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVNHF--CKKVPI--IVVGC 129
           G D Y      ++      +L FDV+S  SF++    W+  +      ++ P+  ++V  
Sbjct: 82  GSDLYKEQISQYWNGVYYAILVFDVSSMESFESC-KAWFELLKSARPDRERPLRAVLVAN 140

Query: 130 KTDL 133
           KTDL
Sbjct: 141 KTDL 144


>6CES-A nrPDB
          Length = 313

 Score = 35.0 bits (79), Expect = 0.025,   Method: Compositional matrix adjust.
 Identities = 29/101 (28%), Positives = 43/101 (42%), Gaps = 18/101 (17%)

Query: 12  PPGVRSVKVVLVGDGGCGKTSLL-MVFADGAFPESYTPTVFERYMVNLQVKGKPVH---- 66
           P      KV+L+G  G GKTS+  ++FA+      Y      R    + V+   V     
Sbjct: 2   PNTAMKKKVLLMGKSGSGKTSMRSIIFAN------YIARDTRRLGATIDVEHSHVRFLGN 55

Query: 67  --LHIWDTAGQDD-----YDRLRPLFYPDASVLLLCFDVTS 100
             L++WD  GQD      +   R   + +  VL+  FDV S
Sbjct: 56  LVLNLWDCGGQDTFMENYFTSQRDNIFRNVEVLIYVFDVES 96


>2IWR-A nrPDB
          Length = 178

 Score = 34.7 bits (78), Expect = 0.028,   Method: Compositional matrix adjust.
 Identities = 40/181 (22%), Positives = 77/181 (42%), Gaps = 21/181 (11%)

Query: 18  VKVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMVNLQVKGKPVHLHIWDTAGQDD 77
           +++ ++GD   GK+SL+  F  G++ +    T  E+Y   + V G+   + I + AG  D
Sbjct: 8   LRLGVLGDARSGKSSLIHRFLTGSY-QVLEKTESEQYKKEMLVDGQTHLVLIREEAGAPD 66

Query: 78  YDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVNHFCKK----VPIIVVGCKTDL 133
                  F   A  ++  F +   NSF  + +R + +++    +    + + +VG +  +
Sbjct: 67  AK-----FSGWADAVIFVFSLEDENSFQAV-SRLHGQLSSLRGEGRGGLALALVGTQDRI 120

Query: 134 CKDKSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNVHAVFQEAAEVALSS 193
                 V          V   R + +   +   +Y E  A    NV  VFQE A+  ++ 
Sbjct: 121 SASSPRV----------VGDARARALCADMKRCSYYETCATYGLNVDRVFQEVAQKVVTL 170

Query: 194 R 194
           R
Sbjct: 171 R 171


>2A5F-A nrPDB
          Length = 175

 Score = 34.7 bits (78), Expect = 0.030,   Method: Compositional matrix adjust.
 Identities = 32/125 (25%), Positives = 56/125 (44%), Gaps = 13/125 (10%)

Query: 14  GVRSVKVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMVNLQ-VKGKPVHLHIWDT 72
           G + ++++++G    GKT++L     G    +  PTV      N++ V  K V  ++WD 
Sbjct: 10  GNKEMRILMLGLDAAGKTTILYKLKLGQ-SVTTIPTVG----FNVETVTYKNVKFNVWDV 64

Query: 73  AGQDDYDRLRPL---FYPDASVLLLCFDVTSPNSFDNIFNRWYPEVNHFCKKVPIIVV-G 128
            GQ   D++RPL   +Y     L+   D    +  D      +  +N    +  II++  
Sbjct: 65  GGQ---DKIRPLWRHYYTGTQGLIFVVDCADRDRIDEARQELHRIINDREMRDAIILIFA 121

Query: 129 CKTDL 133
            K DL
Sbjct: 122 NKQDL 126


>5NZV-F nrPDB
          Length = 181

 Score = 33.9 bits (76), Expect = 0.046,   Method: Compositional matrix adjust.
 Identities = 22/85 (25%), Positives = 41/85 (48%), Gaps = 6/85 (7%)

Query: 14 GVRSVKVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMVNLQ-VKGKPVHLHIWDT 72
          G + +++++VG  G GKT++L     G    +  PT+      N++ V+ K +   +WD 
Sbjct: 14 GNKEMRILMVGLDGAGKTTVLYKLKLGEVITT-IPTI----GFNVETVQYKNISFTVWDV 68

Query: 73 AGQDDYDRLRPLFYPDASVLLLCFD 97
           GQD    L   +Y +   ++   D
Sbjct: 69 GGQDRIRSLWRHYYRNTEGVIFVVD 93


>3LVQ-E nrPDB
          Length = 497

 Score = 33.9 bits (76), Expect = 0.058,   Method: Compositional matrix adjust.
 Identities = 32/136 (23%), Positives = 56/136 (41%), Gaps = 12/136 (8%)

Query: 2   TAAQAAGEEAPPGVRSVKVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMVNLQVK 61
           TA+ + G E     + ++++++G    GKT++L     G    +     F    V     
Sbjct: 308 TASNSPGIEGLSN-KEMRILMLGLDAAGKTTILYKLKLGQSVTTIPTVGFNVETVTY--- 363

Query: 62  GKPVHLHIWDTAGQDDYDRLRPL---FYPDASVLLLCFDVTSPNSFDNIFNRWYPEVNHF 118
            K V  ++WD  GQ   D++RPL   +Y     L+   D    +  D      +  +N  
Sbjct: 364 -KNVKFNVWDVGGQ---DKIRPLWRHYYTGTQGLIFVVDCADRDRIDEARQELHRIINDR 419

Query: 119 CKKVPIIVV-GCKTDL 133
             +  II++   K DL
Sbjct: 420 EMRDAIILIFANKQDL 435


>1YZG-A nrPDB
          Length = 179

 Score = 33.5 bits (75), Expect = 0.060,   Method: Compositional matrix adjust.
 Identities = 25/116 (21%), Positives = 46/116 (39%), Gaps = 5/116 (4%)

Query: 19  KVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMVNLQVKGKPVHLHIWDTAGQDDY 78
           KV++VG    GKT++L  F       + +PT+        ++  K  H  +WD  GQ+  
Sbjct: 18  KVIIVGLDNAGKTTILYQFLMNEVVHT-SPTIGSNVE---EIVVKNTHFLMWDIGGQESL 73

Query: 79  DRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVNHF-CKKVPIIVVGCKTDL 133
                 +Y +   ++L  D              Y  + H   +K  +++   K D+
Sbjct: 74  RSSWNTYYSNTEFIILVVDSIDRERLAITKEELYRMLAHEDLRKAAVLIFANKQDM 129


>3O47-A nrPDB
          Length = 329

 Score = 33.5 bits (75), Expect = 0.071,   Method: Compositional matrix adjust.
 Identities = 21/73 (28%), Positives = 39/73 (53%), Gaps = 9/73 (12%)

Query: 14  GVRSVKVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMVNLQ-VKGKPVHLHIWDT 72
           G + +++++VG    GKT++L     G    +  PT+      N++ V+ K +   +WD 
Sbjct: 162 GKKEMRILMVGLDAAGKTTILYKLKLGEIVTT-IPTI----GFNVETVEYKNISFTVWDV 216

Query: 73  AGQDDYDRLRPLF 85
            GQ   D++RPL+
Sbjct: 217 GGQ---DKIRPLW 226


>5UF8-A nrPDB
          Length = 181

 Score = 33.1 bits (74), Expect = 0.079,   Method: Compositional matrix adjust.
 Identities = 21/73 (28%), Positives = 39/73 (53%), Gaps = 9/73 (12%)

Query: 14 GVRSVKVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMVNLQ-VKGKPVHLHIWDT 72
          G + +++++VG    GKT++L     G    +  PT+      N++ V+ K +   +WD 
Sbjct: 14 GNKEMRILMVGLDAAGKTTILYKLKLGEIVTT-IPTI----GFNVETVEYKNISFTVWDV 68

Query: 73 AGQDDYDRLRPLF 85
           GQ   D++RPL+
Sbjct: 69 GGQ---DKIRPLW 78


>6GNI-B nrPDB
          Length = 167

 Score = 33.1 bits (74), Expect = 0.083,   Method: Compositional matrix adjust.
 Identities = 29/124 (23%), Positives = 52/124 (41%), Gaps = 23/124 (18%)

Query: 19  KVVLVGDGGCGKTSLLMVFAD---GAFPESYTPTVFERYMVNLQVKGKPVHLHIWDTAGQ 75
           K++ +G    GKT+LL +  +        ++ PT  E  + N++          +D  G 
Sbjct: 3   KLLFLGLDNAGKTTLLHMLKNDRLATLQPTWHPTSEELAIGNIKFT-------TFDLGGH 55

Query: 76  DDYDRLRPLFYPDASVLLLCFDVTSPNSFDN-------IFNRWYPEVNHFCKKVPIIVVG 128
               RL   ++P+ + ++   D   P  FD        +FN    E+    K VP +++G
Sbjct: 56  IQARRLWKDYFPEVNGIVFLVDAADPERFDEARVELDALFN--IAEL----KDVPFVILG 109

Query: 129 CKTD 132
            K D
Sbjct: 110 NKID 113


>1Z6X-A nrPDB
          Length = 180

 Score = 33.1 bits (74), Expect = 0.094,   Method: Compositional matrix adjust.
 Identities = 22/73 (30%), Positives = 39/73 (53%), Gaps = 9/73 (12%)

Query: 14 GVRSVKVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMVNLQ-VKGKPVHLHIWDT 72
          G + +++++VG    GKT++L     G    +  PT+      N++ V+ K +   +WD 
Sbjct: 14 GKKQMRILMVGLDAAGKTTILYKLKLGEIVTT-IPTIG----FNVETVEYKNICFTVWDV 68

Query: 73 AGQDDYDRLRPLF 85
           GQ   DR+RPL+
Sbjct: 69 GGQ---DRIRPLW 78


>1M2O-B nrPDB
          Length = 190

 Score = 33.1 bits (74), Expect = 0.095,   Method: Compositional matrix adjust.
 Identities = 29/124 (23%), Positives = 52/124 (41%), Gaps = 23/124 (18%)

Query: 19  KVVLVGDGGCGKTSLLMVFAD---GAFPESYTPTVFERYMVNLQVKGKPVHLHIWDTAGQ 75
           K++ +G    GKT+LL +  +        ++ PT  E  + N++          +D  G 
Sbjct: 25  KLLFLGLDNAGKTTLLHMLKNDRLATLQPTWHPTSEELAIGNIKFT-------TFDLGGH 77

Query: 76  DDYDRLRPLFYPDASVLLLCFDVTSPNSFDN-------IFNRWYPEVNHFCKKVPIIVVG 128
               RL   ++P+ + ++   D   P  FD        +FN    E+    K VP +++G
Sbjct: 78  IQARRLWKDYFPEVNGIVFLVDAADPERFDEARVELDALFN--IAEL----KDVPFVILG 131

Query: 129 CKTD 132
            K D
Sbjct: 132 NKID 135


>6FAE-B nrPDB
          Length = 213

 Score = 33.1 bits (74), Expect = 0.099,   Method: Compositional matrix adjust.
 Identities = 23/86 (26%), Positives = 44/86 (51%), Gaps = 12/86 (13%)

Query: 16  RSVKVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMVNLQ-VKGKPVHLHIWDTAG 74
           +S+++++VG    GKT++L     G    +  PT+      N++ V+ K +   +WD  G
Sbjct: 48  QSMRILMVGLDAAGKTTILYKLKLGEIVTT-IPTI----GFNVETVEYKNISFTVWDVGG 102

Query: 75  QDDYDRLRPL---FYPDASVLLLCFD 97
           Q   D++RPL   ++ +   L+   D
Sbjct: 103 Q---DKIRPLWRHYFQNTQGLIFVVD 125


>4ZI3-A nrPDB
          Length = 190

 Score = 32.7 bits (73), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 28/122 (22%), Positives = 53/122 (43%), Gaps = 11/122 (9%)

Query: 16  RSVKVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMVNLQVKGKPVHLHIWDTAGQ 75
           + V+++L+G    GKT+LL   A        TPT  + + +   V+ +   L++WD  GQ
Sbjct: 16  QEVRILLLGLDNAGKTTLLKQLASEDISH-ITPT--QGFNIK-SVQSQGFKLNVWDIGGQ 71

Query: 76  DDYDRLRPL---FYPDASVLLLCFDVTSPNSFDNIFNRWYPEVNHFCKK-VPIIVVGCKT 131
               ++RP    ++ +  +L+   D      F+         +       VP+++   K 
Sbjct: 72  ---RKIRPYWRSYFENTDILIYVIDSADRKRFEETGQELTELLEEEKLSCVPVLIFANKQ 128

Query: 132 DL 133
           DL
Sbjct: 129 DL 130


>4M9Q-A nrPDB
          Length = 227

 Score = 32.7 bits (73), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 31/123 (25%), Positives = 49/123 (39%), Gaps = 9/123 (7%)

Query: 14  GVRSVKVVLVGDGGCGKTSLLMVFADGAFPESYTPTV-FERYMVNLQVKGKPVHLHIWDT 72
           G R + + L+G    GKT+LL     G      TPT  F    +N   +GK   + ++D 
Sbjct: 1   GPRKITIALLGLDNAGKTTLLNSI-QGEVDRDTTPTFGFNSTTLN---EGK-YKIEVFDL 55

Query: 73  AGQDDYDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEV--NHFCKKVPIIVVGCK 130
            G  +   +   +  +   ++   D   P  F+        EV  N F +  PI +   K
Sbjct: 56  GGGKNIRGVWKKYLAEVHAIVYVVDAADPGRFEE-SKMTMAEVLENQFMRDKPICIFANK 114

Query: 131 TDL 133
            DL
Sbjct: 115 QDL 117


>5DI3-B nrPDB
          Length = 263

 Score = 32.7 bits (73), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 31/123 (25%), Positives = 49/123 (39%), Gaps = 9/123 (7%)

Query: 14  GVRSVKVVLVGDGGCGKTSLLMVFADGAFPESYTPTV-FERYMVNLQVKGKPVHLHIWDT 72
           G R + + L+G    GKT+LL     G      TPT  F    +N   +GK   + ++D 
Sbjct: 1   GPRKITIALLGLDNAGKTTLLNSIQ-GEVDRDTTPTFGFNSTTLN---EGK-YKIEVFDL 55

Query: 73  AGQDDYDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEV--NHFCKKVPIIVVGCK 130
            G  +   +   +  +   ++   D   P  F+        EV  N F +  PI +   K
Sbjct: 56  GGGKNIRGVWKKYLAEVHAIVYVVDAADPGRFEE-SKMTMAEVLENQFMRDKPICIFANK 114

Query: 131 TDL 133
            DL
Sbjct: 115 QDL 117


>3AQ4-A nrPDB
          Length = 184

 Score = 31.6 bits (70), Expect = 0.24,   Method: Compositional matrix adjust.
 Identities = 22/86 (25%), Positives = 43/86 (50%), Gaps = 12/86 (13%)

Query: 16 RSVKVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMVNLQ-VKGKPVHLHIWDTAG 74
          + +++++VG    GKT++L     G    +  PT+      N++ V+ K +   +WD  G
Sbjct: 19 KEMRILMVGLDAAGKTTILYKLKLGEIVTT-IPTI----GFNVETVEYKNISFTVWDVGG 73

Query: 75 QDDYDRLRPL---FYPDASVLLLCFD 97
          Q   D++RPL   ++ +   L+   D
Sbjct: 74 Q---DKIRPLWRHYFQNTQGLIFVVD 96


>2H16-A nrPDB
          Length = 183

 Score = 31.6 bits (70), Expect = 0.26,   Method: Compositional matrix adjust.
 Identities = 25/119 (21%), Positives = 48/119 (40%), Gaps = 11/119 (9%)

Query: 19  KVVLVGDGGCGKTSLLMVFADGAFPESYTPTV---FERYMVNLQVKGKPVHLHIWDTAGQ 75
           KV++VG    GKT++L  F+      + +PT+    E  ++N           +WD  GQ
Sbjct: 24  KVIIVGLDNAGKTTILYQFSMNEVVHT-SPTIGSNVEEIVIN------NTRFLMWDIGGQ 76

Query: 76  DDYDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVNHF-CKKVPIIVVGCKTDL 133
           +        +Y +   +++  D T            Y  + H   +K  +++   K D+
Sbjct: 77  ESLRSSWNTYYTNTEFVIVVVDSTDRERISVTREELYKMLAHEDLRKAGLLIFANKQDV 135


>2B6H-A nrPDB
          Length = 192

 Score = 31.2 bits (69), Expect = 0.33,   Method: Compositional matrix adjust.
 Identities = 23/88 (26%), Positives = 44/88 (50%), Gaps = 12/88 (13%)

Query: 14  GVRSVKVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMVNLQ-VKGKPVHLHIWDT 72
           G + +++++VG    GKT++L     G    +  PT+      N++ V+ K +   +WD 
Sbjct: 26  GKKQMRILMVGLDAAGKTTILYKLKLGEIVTT-IPTIG----FNVETVEYKNICFTVWDV 80

Query: 73  AGQDDYDRLRPL---FYPDASVLLLCFD 97
            GQ   D++RPL   ++ +   L+   D
Sbjct: 81  GGQ---DKIRPLWRHYFQNTQGLIFVVD 105


>1MOZ-A nrPDB
          Length = 183

 Score = 31.2 bits (69), Expect = 0.36,   Method: Compositional matrix adjust.
 Identities = 22/91 (24%), Positives = 45/91 (49%), Gaps = 12/91 (13%)

Query: 16  RSVKVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMVNLQ-VKGKPVHLHIWDTAG 74
           + ++++++G  G GKT++L     G    +  PT+      N++ +  K + L++WD  G
Sbjct: 17  KELRILILGLDGAGKTTILYRLQIGEVVTT-KPTIG----FNVETLSYKNLKLNVWDLGG 71

Query: 75  QDDYDRLRPL---FYPDASVLLLCFDVTSPN 102
           Q     +RP    +Y D + ++   D T  +
Sbjct: 72  Q---TSIRPYWRCYYADTAAVIFVVDSTDKD 99


>3BH6-A nrPDB
          Length = 164

 Score = 30.4 bits (67), Expect = 0.55,   Method: Compositional matrix adjust.
 Identities = 28/124 (22%), Positives = 52/124 (41%), Gaps = 11/124 (8%)

Query: 14  GVRSVKVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMVNLQVKGKPVHLHIWDTA 73
           G   V+++L+G    GKT+LL   A        TPT  + + +   V+ +   L++WD  
Sbjct: 1   GGSEVRILLLGLDNAGKTTLLKQLASEDISH-ITPT--QGFNIK-SVQSQGFKLNVWDIG 56

Query: 74  GQDDYDRLRPL---FYPDASVLLLCFDVTSPNSFDNIFNRWYPEVNHFCKK-VPIIVVGC 129
           G     ++RP    ++ +  +L+   D      F+         +       VP+++   
Sbjct: 57  G---LRKIRPYWRSYFENTDILIYVIDSADRKRFEETGQELTELLEEEKLSCVPVLIFAN 113

Query: 130 KTDL 133
           K DL
Sbjct: 114 KQDL 117


>1J2J-A nrPDB
          Length = 166

 Score = 30.0 bits (66), Expect = 0.70,   Method: Compositional matrix adjust.
 Identities = 22/85 (25%), Positives = 42/85 (49%), Gaps = 12/85 (14%)

Query: 17 SVKVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMVNLQ-VKGKPVHLHIWDTAGQ 75
          S+++++VG    GKT++L     G    +  PT+      N++ V+ K +   +WD  G 
Sbjct: 2  SMRILMVGLDAAGKTTILYKLKLGEIVTT-IPTIG----FNVETVEYKNISFTVWDVGG- 55

Query: 76 DDYDRLRPL---FYPDASVLLLCFD 97
             D++RPL   ++ +   L+   D
Sbjct: 56 --LDKIRPLWRHYFQNTQGLIFVVD 78


>2YYZ-A nrPDB
          Length = 359

 Score = 28.5 bits (62), Expect = 2.2,   Method: Compositional matrix adjust.
 Identities = 17/45 (37%), Positives = 23/45 (51%), Gaps = 5/45 (11%)

Query: 20 VVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMVNLQVKGKP 64
          V L+G  GCGKT+ L++ A       Y PT  E Y  ++ V   P
Sbjct: 32 VALLGPSGCGKTTTLLMLAG-----IYKPTSGEIYFDDVLVNDIP 71


>5IRR-A nrPDB
          Length = 308

 Score = 28.5 bits (62), Expect = 2.3,   Method: Compositional matrix adjust.
 Identities = 16/42 (38%), Positives = 23/42 (54%), Gaps = 14/42 (33%)

Query: 18 VKVVLVGDGGCGKTSLL----------MVFADGAFPESYTPT 49
          +K+++VGD G GKT+L+          +   DG    SYTPT
Sbjct: 27 IKLIVVGDSGLGKTTLIKSLISIPGERLQVHDG----SYTPT 64


>1SHZ-A nrPDB
          Length = 340

 Score = 28.5 bits (62), Expect = 2.4,   Method: Compositional matrix adjust.
 Identities = 15/59 (25%), Positives = 27/59 (45%), Gaps = 7/59 (11%)

Query: 9  EEAPPGVRSVKVVLVGDGGCGKTSLLMVFA-------DGAFPESYTPTVFERYMVNLQV 60
          E+     R VK++L+G G  GK++ L           D    E + PT++   +  ++V
Sbjct: 4  EDGEKAAREVKLLLLGAGESGKSTFLKQMRIIHGQDFDQRAREEFRPTIYSNVIKGMRV 62


>2CC0-A nrPDB
          Length = 195

 Score = 28.1 bits (61), Expect = 2.5,   Method: Compositional matrix adjust.
 Identities = 11/26 (42%), Positives = 19/26 (73%)

Query: 137 KSLVNKLRRNGLEPVTYHRGQEMARS 162
           +SL+N LR+NGL    +++GQ  A++
Sbjct: 20  QSLLNALRQNGLRATMFNQGQYAAQN 45


>2X77-A nrPDB
          Length = 189

 Score = 28.1 bits (61), Expect = 2.7,   Method: Compositional matrix adjust.
 Identities = 28/126 (22%), Positives = 53/126 (42%), Gaps = 13/126 (10%)

Query: 13  PGVRSVKVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMVNLQ-VKGKPVHLHIWD 71
           P  R ++V+++G    GKTS+L     G    +          VNL+ ++ K +   +WD
Sbjct: 18  PADRKIRVLMLGLDNAGKTSILYRLHLGDVVTTVPTV-----GVNLETLQYKNISFEVWD 72

Query: 72  TAGQDDYDRLRPL---FYPDASVLLLCFDVTSPNSFDNIFNRWYPEVNH-FCKKVPIIVV 127
             GQ     +RP    ++ D   ++   D T  +      +  Y  ++    +K  +++ 
Sbjct: 73  LGGQTG---VRPYWRCYFSDTDAVIYVVDSTDRDRMGVAKHELYALLDEDELRKSLLLIF 129

Query: 128 GCKTDL 133
             K DL
Sbjct: 130 ANKQDL 135


>1D5A-A nrPDB
          Length = 733

 Score = 27.7 bits (60), Expect = 3.3,   Method: Composition-based stats.
 Identities = 22/87 (25%), Positives = 40/87 (45%), Gaps = 12/87 (13%)

Query: 69  IWDTAGQDDYDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWY---PEVNH-FCKKVPI 124
           +W+     DY  L P        +++  +V SP++ +    R Y   P+V H FCK  P 
Sbjct: 396 LWENIVYLDYKSLYP-------SIIITHNV-SPDTLNREGCREYDVAPQVGHRFCKDFPG 447

Query: 125 IVVGCKTDLCKDKSLVNKLRRNGLEPV 151
            +     DL +++  V K  +  ++P+
Sbjct: 448 FIPSLLGDLLEERQKVKKKMKATVDPI 474


>5KDW-A nrPDB
          Length = 885

 Score = 27.7 bits (60), Expect = 3.5,   Method: Compositional matrix adjust.
 Identities = 16/49 (32%), Positives = 23/49 (46%), Gaps = 2/49 (4%)

Query: 25  DGGCGKTSLLMVFADGAFPESYTPTVFERYMVNLQVKGKPVHLHIWDTA 73
           D  C  TS L+V  +GA   S + TV  R    L +    VH + W+ +
Sbjct: 171 DASCASTSKLLVLGNGASAASLSATVRARLQAGLPI--LFVHTNGWNQS 217


>3A52-A nrPDB
          Length = 400

 Score = 27.7 bits (60), Expect = 3.5,   Method: Compositional matrix adjust.
 Identities = 15/40 (37%), Positives = 21/40 (52%), Gaps = 1/40 (2%)

Query: 20 VVLVGDG-GCGKTSLLMVFADGAFPESYTPTVFERYMVNL 58
          +++VGDG G   TS    F D    E    TVF+R +V +
Sbjct: 4  IIMVGDGMGPAYTSAYRYFQDNPDTEEIEQTVFDRLLVGM 43


>6D2K-A nrPDB
          Length = 288

 Score = 27.7 bits (60), Expect = 3.5,   Method: Compositional matrix adjust.
 Identities = 12/29 (41%), Positives = 17/29 (58%), Gaps = 2/29 (6%)

Query: 174 RLHDNVHAVFQEAAEVALSSRG--RNFWR 200
           +LH  VH  +Q+  E  L SR   +NFW+
Sbjct: 247 KLHPEVHGPYQDTLEFLLGSRDECKNFWK 275


>1ZCB-A nrPDB
          Length = 362

 Score = 27.7 bits (60), Expect = 4.0,   Method: Compositional matrix adjust.
 Identities = 15/59 (25%), Positives = 27/59 (45%), Gaps = 7/59 (11%)

Query: 9  EEAPPGVRSVKVVLVGDGGCGKTSLLMVFA-------DGAFPESYTPTVFERYMVNLQV 60
          E+     R VK++L+G G  GK++ L           D    E + PT++   +  ++V
Sbjct: 25 EDGERSARLVKILLLGAGESGKSTFLKQMRIIHGQDFDQRAREEFRPTIYSNVIKGMRV 83


>5KSO-A nrPDB
          Length = 190

 Score = 27.3 bits (59), Expect = 4.6,   Method: Compositional matrix adjust.
 Identities = 18/72 (25%), Positives = 36/72 (50%), Gaps = 14/72 (19%)

Query: 91  VLLLCFDVTSPNSFD---NIFNRWYPEVNHFCKKVPIIVVGCKTDLCKDKSLVNKLRRNG 147
           V+ L +DV++P SF+    IF + + +      ++P ++V  K+DL + K      +   
Sbjct: 81  VVCLVYDVSNPKSFEYCARIFKQHFMD-----SRIPCLIVAAKSDLHEVK------QEYS 129

Query: 148 LEPVTYHRGQEM 159
           + P  + R  +M
Sbjct: 130 ISPTDFCRKHKM 141


>6HQW-A nrPDB
          Length = 445

 Score = 27.3 bits (59), Expect = 5.2,   Method: Compositional matrix adjust.
 Identities = 15/43 (34%), Positives = 22/43 (51%), Gaps = 4/43 (9%)

Query: 47 TPTVFERYMVNLQ--VKGKPVHLHIWDTAGQDDY--DRLRPLF 85
          +PT  E +   L+   +  P H H WD +  D Y  DR +P+F
Sbjct: 17 SPTATEAFAAWLKDNPQAIPAHSHPWDVSRSDIYVEDRWQPIF 59


>4LTY-C nrPDB
          Length = 354

 Score = 26.9 bits (58), Expect = 6.0,   Method: Compositional matrix adjust.
 Identities = 11/24 (45%), Positives = 15/24 (62%)

Query: 39 DGAFPESYTPTVFERYMVNLQVKG 62
          D   P SY  T++ R++VNLQ  G
Sbjct: 65 DTGSPPSYARTLYNRFVVNLQQTG 88


>5KU1-A nrPDB
          Length = 424

 Score = 26.9 bits (58), Expect = 7.1,   Method: Compositional matrix adjust.
 Identities = 18/72 (25%), Positives = 36/72 (50%), Gaps = 14/72 (19%)

Query: 91  VLLLCFDVTSPNSFD---NIFNRWYPEVNHFCKKVPIIVVGCKTDLCKDKSLVNKLRRNG 147
           V+ L +DV++P SF+    IF + + +      ++P ++V  K+DL + K      +   
Sbjct: 315 VVCLVYDVSNPKSFEYCARIFKQHFMD-----SRIPCLIVAAKSDLHEVK------QEYS 363

Query: 148 LEPVTYHRGQEM 159
           + P  + R  +M
Sbjct: 364 ISPTDFCRKHKM 375


>3PV0-A nrPDB
          Length = 381

 Score = 26.6 bits (57), Expect = 8.7,   Method: Compositional matrix adjust.
 Identities = 11/19 (57%), Positives = 14/19 (73%)

Query: 20 VVLVGDGGCGKTSLLMVFA 38
          VV VG  GCGK++LL + A
Sbjct: 32 VVFVGPSGCGKSTLLRMIA 50


Searching..................................................done


Results from round 2


                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value
Sequences used in model and found again:

2J1L-A nrPDB                                                          284   2e-77
5C2K-A nrPDB                                                          259   8e-70
5JCP-B nrPDB                                                          257   4e-69
5ZHX-e nrPDB                                                          254   2e-68
3RYT-C nrPDB                                                          250   3e-67
3TH5-A nrPDB                                                          248   1e-66
3VHL-B nrPDB                                                          245   1e-65
2WKQ-A nrPDB                                                          242   7e-65
2FV8-A nrPDB                                                          240   2e-64
2W2X-A nrPDB                                                          240   3e-64
2NTY-C nrPDB                                                          240   3e-64
2WBL-C nrPDB                                                          240   4e-64
1RYH-A nrPDB                                                          240   4e-64
3BWD-D nrPDB                                                          238   1e-63
2J0V-A nrPDB                                                          237   2e-63
3A58-B nrPDB                                                          235   8e-63
5ZVP-A nrPDB                                                          235   1e-62
2ATX-A nrPDB                                                          233   5e-62
5VCU-A nrPDB                                                          232   6e-62
4U5X-A nrPDB                                                          230   2e-61
4MIT-A nrPDB                                                          220   3e-58
2Q3H-A nrPDB                                                          218   9e-58
2A5J-A nrPDB                                                          214   2e-56
5SZI-A nrPDB                                                          212   8e-56
3L0I-B nrPDB                                                          212   9e-56
3CUE-F nrPDB                                                          212   9e-56
4LHX-A nrPDB                                                          212   1e-55
5SZH-B nrPDB                                                          212   1e-55
2RHD-A nrPDB                                                          212   1e-55
1YZN-A nrPDB                                                          208   1e-54
6O62-A nrPDB                                                          207   2e-54
1GWN-A nrPDB                                                          207   4e-54
1Z0A-A nrPDB                                                          207   4e-54
1M7B-A nrPDB                                                          206   5e-54
4M8N-E nrPDB                                                          206   6e-54
2WWX-A nrPDB                                                          206   6e-54
4QXA-A nrPDB                                                          205   8e-54
5SZJ-A nrPDB                                                          205   8e-54
3CPH-A nrPDB                                                          205   1e-53
1WMS-A nrPDB                                                          205   1e-53
5LPN-A nrPDB                                                          205   1e-53
2OCY-C nrPDB                                                          204   3e-53
4RKE-A nrPDB                                                          203   3e-53
6IF2-B nrPDB                                                          203   4e-53
1X3S-A nrPDB                                                          202   1e-52
5FBL-B nrPDB                                                          202   1e-52
2OCB-A nrPDB                                                          201   2e-52
1Z0F-A nrPDB                                                          200   3e-52
1ZBD-A nrPDB                                                          199   6e-52
2GF9-A nrPDB                                                          199   9e-52
4DXA-A nrPDB                                                          198   2e-51
4G01-B nrPDB                                                          198   2e-51
4RKF-A nrPDB                                                          197   2e-51
3RAB-A nrPDB                                                          197   3e-51
2F9L-A nrPDB                                                          197   4e-51
2HEI-A nrPDB                                                          196   7e-51
4KLZ-A nrPDB                                                          195   1e-50
2O52-A nrPDB                                                          195   1e-50
5LDD-C nrPDB                                                          195   1e-50
1TU4-A nrPDB                                                          194   2e-50
4UJ4-A nrPDB                                                          194   2e-50
3DZ8-A nrPDB                                                          194   2e-50
2HUP-A nrPDB                                                          194   2e-50
2F7S-A nrPDB                                                          193   3e-50
3REG-A nrPDB                                                          193   3e-50
2G6B-A nrPDB                                                          193   4e-50
3CPJ-B nrPDB                                                          193   5e-50
2FG5-A nrPDB                                                          193   5e-50
2EW1-A nrPDB                                                          193   6e-50
1EK0-A nrPDB                                                          192   8e-50
2BMD-A nrPDB                                                          192   9e-50
2IL1-A nrPDB                                                          192   1e-49
5XR6-A nrPDB                                                          192   1e-49
2REX-B nrPDB                                                          191   2e-49
6HUF-A nrPDB                                                          190   3e-49
5UB8-A nrPDB                                                          190   3e-49
4PHF-A nrPDB                                                          190   4e-49
3BC1-A nrPDB                                                          190   4e-49
4KYI-B nrPDB                                                          190   5e-49
2IEZ-A nrPDB                                                          189   6e-49
2IEY-A nrPDB                                                          188   1e-48
6IYB-A nrPDB                                                          188   2e-48
1YVD-A nrPDB                                                          187   3e-48
5CM8-B nrPDB                                                          185   1e-47
3BFK-A nrPDB                                                          185   1e-47
1Z06-A nrPDB                                                          185   2e-47
3RWM-B nrPDB                                                          185   2e-47
2G77-B nrPDB                                                          185   2e-47
2FFQ-A nrPDB                                                          184   2e-47
1YZU-A nrPDB                                                          184   3e-47
5YOZ-A nrPDB                                                          183   4e-47
1D5C-A nrPDB                                                          183   4e-47
5LEF-A nrPDB                                                          183   4e-47
3TSO-A nrPDB                                                          183   5e-47
2KE5-A nrPDB                                                          181   2e-46
3CON-A nrPDB                                                          180   3e-46
2GIL-A nrPDB                                                          180   3e-46
2P5S-A nrPDB                                                          180   4e-46
2ERX-A nrPDB                                                          180   5e-46
5HZH-A nrPDB                                                          179   9e-46
2N1B-A nrPDB                                                          178   1e-45
1ZC4-A nrPDB                                                          178   1e-45
3WYF-A nrPDB                                                          178   2e-45
4WA7-A nrPDB                                                          177   2e-45
5XOJ-A nrPDB                                                          177   3e-45
5WDQ-A nrPDB                                                          175   1e-44
5UHV-A nrPDB                                                          175   1e-44
4KU4-A nrPDB                                                          175   2e-44
2ERY-A nrPDB                                                          172   1e-43
5WDR-A nrPDB                                                          171   1e-43
5UWI-A nrPDB                                                          171   1e-43
5CLL-A nrPDB                                                          171   1e-43
2ATV-A nrPDB                                                          171   2e-43
4FMC-F nrPDB                                                          171   2e-43
2FN4-A nrPDB                                                          170   3e-43
1Z22-A nrPDB                                                          170   4e-43
3T5G-A nrPDB                                                          170   4e-43
3OES-A nrPDB                                                          166   5e-42
3PIR-A nrPDB                                                          166   5e-42
3CBQ-A nrPDB                                                          161   2e-40
2CJW-A nrPDB                                                          161   2e-40
4CZ2-A nrPDB                                                          160   3e-40
2G3Y-A nrPDB                                                          160   4e-40
2GF0-A nrPDB                                                          158   2e-39
3RAP-R nrPDB                                                          158   2e-39
6FF8-A nrPDB                                                          157   3e-39
3Q72-A nrPDB                                                          156   8e-39
4DJT-A nrPDB                                                          155   1e-38
3Q85-A nrPDB                                                          154   2e-38
5XC3-A nrPDB                                                          150   6e-37
2NZJ-A nrPDB                                                          150   6e-37
3E5H-A nrPDB                                                          146   6e-36
3CLV-A nrPDB                                                          145   1e-35
3C5C-A nrPDB                                                          132   1e-31
5C1S-A nrPDB                                                          128   1e-30
3IHW-A nrPDB                                                          126   7e-30
6HLU-A nrPDB                                                          116   5e-27
3DPU-A nrPDB                                                          116   5e-27
2AL7-A nrPDB                                                          114   2e-26
4ILE-A nrPDB                                                          110   3e-25
4WNR-A nrPDB                                                          107   3e-24
3D6T-B nrPDB                                                          107   3e-24
4C0K-A nrPDB                                                           92   1e-19

Sequences not found previously or not previously below threshold:

2IWR-A nrPDB                                                          101   2e-22
2YC4-C nrPDB                                                           87   5e-18
3LVQ-E nrPDB                                                           86   1e-17
4YLG-A nrPDB                                                           84   5e-17
2H16-A nrPDB                                                           82   2e-16
2A5F-A nrPDB                                                           81   3e-16
1YZG-A nrPDB                                                           80   8e-16
6BBQ-A nrPDB                                                           79   1e-15
1Z6X-A nrPDB                                                           78   2e-15
3O47-A nrPDB                                                           78   2e-15
5NZV-F nrPDB                                                           78   3e-15
3LRP-A nrPDB                                                           78   3e-15
2B6H-A nrPDB                                                           76   1e-14
6FAE-B nrPDB                                                           76   1e-14
5UF8-A nrPDB                                                           75   2e-14
3AQ4-A nrPDB                                                           75   3e-14
4ZI3-A nrPDB                                                           75   3e-14
6DFF-C nrPDB                                                           73   1e-13
5EE5-B nrPDB                                                           73   1e-13
1J2J-A nrPDB                                                           72   2e-13
3BH6-A nrPDB                                                           71   2e-13
2H57-A nrPDB                                                           70   9e-13
1MOZ-A nrPDB                                                           68   2e-12
1KSG-A nrPDB                                                           68   3e-12
4V0N-A nrPDB                                                           65   2e-11
5DE3-A nrPDB                                                           61   5e-10
2X77-A nrPDB                                                           60   1e-09
4ARZ-A nrPDB                                                           58   3e-09
2GJ9-A nrPDB                                                           58   3e-09
6CES-A nrPDB                                                           58   4e-09
2GAO-A nrPDB                                                           57   4e-09
2YWH-A nrPDB                                                           57   6e-09
3GEH-A nrPDB                                                           56   1e-08
6GNI-B nrPDB                                                           55   2e-08
1M2O-B nrPDB                                                           55   2e-08
1XZP-A nrPDB                                                           54   6e-08
1F6B-A nrPDB                                                           53   7e-08
3J8G-X nrPDB                                                           53   9e-08
5DI3-B nrPDB                                                           52   1e-07
4M9Q-A nrPDB                                                           52   2e-07
6G79-A nrPDB                                                           52   2e-07
2LKD-A nrPDB                                                           51   3e-07
5IMR-C nrPDB                                                           51   3e-07
5J8B-z nrPDB                                                           51   3e-07
4BAS-A nrPDB                                                           51   4e-07
5KU1-A nrPDB                                                           50   5e-07
5KSO-A nrPDB                                                           50   5e-07
3T1O-A nrPDB                                                           50   6e-07
6GDG-D nrPDB                                                           50   8e-07
1WF3-A nrPDB                                                           49   1e-06
6IAE-A nrPDB                                                           49   1e-06
1MKY-A nrPDB                                                           48   3e-06
5DN8-A nrPDB                                                           48   4e-06
5YMX-A nrPDB                                                           47   5e-06
3CB4-D nrPDB                                                           47   7e-06
6D4G-A nrPDB                                                           46   8e-06
2DYK-A nrPDB                                                           45   2e-05
2E87-A nrPDB                                                           45   3e-05
5LAD-A nrPDB                                                           44   3e-05
5ZZM-A nrPDB                                                           44   4e-05
4V7F-o nrPDB                                                           44   4e-05
3PR1-A nrPDB                                                           44   5e-05
3R9W-A nrPDB                                                           44   5e-05
6GB2-BC nrPDB                                                          44   6e-05
4KJZ-A nrPDB                                                           43   9e-05
4B44-A nrPDB                                                           43   9e-05
3V00-C nrPDB                                                           43   1e-04
5KUT-A nrPDB                                                           43   1e-04
3C5H-A nrPDB                                                           43   1e-04
3EC1-A nrPDB                                                           43   1e-04
3J4J-A nrPDB                                                           43   1e-04
2GTP-A nrPDB                                                           42   2e-04
2CXX-A nrPDB                                                           42   2e-04
2QAG-A nrPDB                                                           41   4e-04
3FTQ-A nrPDB                                                           41   4e-04
3IZY-P nrPDB                                                           41   4e-04
1SHZ-A nrPDB                                                           41   5e-04
3JB9-B nrPDB                                                           40   6e-04
3IEU-A nrPDB                                                           40   7e-04
2ODE-A nrPDB                                                           39   0.001
3T5D-A nrPDB                                                           39   0.001
1LNZ-A nrPDB                                                           39   0.001
4TN1-B nrPDB                                                           39   0.002
5YT0-A nrPDB                                                           39   0.002
1ZCB-A nrPDB                                                           39   0.002
4NCL-A nrPDB                                                           39   0.002
4N3G-A nrPDB                                                           39   0.002
5FG3-A nrPDB                                                           38   0.002
6OIK-A nrPDB                                                           38   0.002
2QAG-C nrPDB                                                           38   0.003
5CYO-A nrPDB                                                           38   0.003
3GEE-A nrPDB                                                           38   0.003
3H2Y-A nrPDB                                                           38   0.004
3LLU-A nrPDB                                                           37   0.005
2BCJ-Q nrPDB                                                           37   0.005
4QJ3-A nrPDB                                                           37   0.006
5KH0-A nrPDB                                                           37   0.007
5IRR-A nrPDB                                                           36   0.008
4V8Y-CP nrPDB                                                          36   0.009
1TAG-A nrPDB                                                           36   0.009
4NCF-A nrPDB                                                           36   0.010
3WBI-A nrPDB                                                           36   0.011
4V8Z-CV nrPDB                                                          36   0.012
6OIJ-A nrPDB                                                           36   0.014
6F1T-i nrPDB                                                           35   0.022
6F1Y-j nrPDB                                                           35   0.023
6D9H-A nrPDB                                                           35   0.024
5NON-A nrPDB                                                           35   0.026
4DCU-A nrPDB                                                           35   0.026
2VNE-A nrPDB                                                           35   0.026
2QTH-A nrPDB                                                           35   0.026
6CES-C nrPDB                                                           35   0.027
2Q3F-A nrPDB                                                           35   0.027
1HEY-A nrPDB                                                           35   0.027
4YMS-J nrPDB                                                           34   0.038
1SUL-A nrPDB                                                           34   0.044
3K53-A nrPDB                                                           34   0.048
1G7S-A nrPDB                                                           34   0.059
5VAI-A nrPDB                                                           33   0.068
1PUJ-A nrPDB                                                           33   0.087
4FID-A nrPDB                                                           33   0.11 
1ZCA-A nrPDB                                                           33   0.11 
4V89-AW nrPDB                                                          33   0.12 
1YE8-A nrPDB                                                           33   0.13 
6HZK-A nrPDB                                                           33   0.13 
4KV9-A nrPDB                                                           33   0.13 
5M04-A nrPDB                                                           33   0.14 
4U00-A nrPDB                                                           33   0.14 
4CSU-9 nrPDB                                                           32   0.17 
4KXX-A nrPDB                                                           32   0.20 
2QU8-A nrPDB                                                           32   0.20 
3DEF-A nrPDB                                                           31   0.26 
2YYZ-A nrPDB                                                           31   0.27 
1YR7-A nrPDB                                                           31   0.27 
3ZJC-A nrPDB                                                           31   0.29 
4Z54-A nrPDB                                                           31   0.35 
4WQY-BZ nrPDB                                                          31   0.37 
5MKK-A nrPDB                                                           31   0.42 
5IDV-A nrPDB                                                           31   0.43 
1U0L-A nrPDB                                                           31   0.44 
5C78-A nrPDB                                                           31   0.47 
1IQP-A nrPDB                                                           31   0.47 
1R6B-X nrPDB                                                           31   0.49 
6G12-A nrPDB                                                           31   0.50 
6D00-1 nrPDB                                                           31   0.50 
3A1W-A nrPDB                                                           31   0.51 
5X4B-A nrPDB                                                           31   0.52 
6QUZ-B nrPDB                                                           30   0.56 
2YV5-A nrPDB                                                           30   0.56 
6ED3-A nrPDB                                                           30   0.59 
3V70-A nrPDB                                                           30   0.61 
2WJG-A nrPDB                                                           30   0.62 
2GA8-A nrPDB                                                           30   0.62 
5ZLU-EE nrPDB                                                          30   0.68 
5B3F-A nrPDB                                                           30   0.68 
5AR1-A nrPDB                                                           30   0.72 
2PJZ-A nrPDB                                                           30   0.76 
4YPN-A nrPDB                                                           30   0.78 
4YPL-A nrPDB                                                           30   0.78 
3A1U-A nrPDB                                                           30   0.78 
2IYT-A nrPDB                                                           30   0.78 
4RY2-A nrPDB                                                           30   0.78 
4Q7L-A nrPDB                                                           30   0.79 
6HA8-V nrPDB                                                           30   0.79 
3B5X-A nrPDB                                                           30   0.82 
3GD7-A nrPDB                                                           30   0.85 
1QVR-A nrPDB                                                           30   0.95 
2NQL-A nrPDB                                                           29   1.0  
6G2G-A nrPDB                                                           29   1.0  
4AC9-A nrPDB                                                           29   1.0  
5OFO-C nrPDB                                                           29   1.0  
5NKM-B nrPDB                                                           29   1.1  
4CIU-A nrPDB                                                           29   1.1  
6FT6-s nrPDB                                                           29   1.1  
3J3U-A nrPDB                                                           29   1.1  
5H7J-A nrPDB                                                           29   1.1  
4YDS-A nrPDB                                                           29   1.1  
1JBK-A nrPDB                                                           29   1.2  
6EM8-A nrPDB                                                           29   1.2  
5MRE-WW nrPDB                                                          29   1.2  
2IW3-A nrPDB                                                           29   1.2  
5VHD-D nrPDB                                                           29   1.2  
4HSE-A nrPDB                                                           29   1.3  
6EMW-E nrPDB                                                           29   1.3  
5OCH-A nrPDB                                                           29   1.3  
3D0O-A nrPDB                                                           29   1.3  
6O81-S nrPDB                                                           29   1.3  
6FEC-S nrPDB                                                           29   1.3  
4MKI-B nrPDB                                                           29   1.3  
1NI3-A nrPDB                                                           29   1.3  
1IRQ-A nrPDB                                                           29   1.3  
3PXG-A nrPDB                                                           29   1.3  
5EE0-A nrPDB                                                           29   1.3  
1UDX-A nrPDB                                                           29   1.3  
3PXI-A nrPDB                                                           29   1.4  
2OHF-A nrPDB                                                           29   1.4  
3LLM-A nrPDB                                                           29   1.4  
4HZI-A nrPDB                                                           29   1.4  
3PV0-A nrPDB                                                           29   1.4  
5H7K-A nrPDB                                                           29   1.5  
2RGK-A nrPDB                                                           29   1.5  
2P8Y-T nrPDB                                                           29   1.5  
1ZE1-A nrPDB                                                           29   1.5  
3VX4-A nrPDB                                                           29   1.5  
3LXX-A nrPDB                                                           29   1.5  
3FVQ-A nrPDB                                                           29   1.5  
1H65-A nrPDB                                                           29   1.5  
6H7G-A nrPDB                                                           29   1.5  
6I3O-A nrPDB                                                           29   1.6  
5D4W-A nrPDB                                                           29   1.6  
4MYH-A nrPDB                                                           29   1.6  
2GZA-A nrPDB                                                           29   1.6  
1WXQ-A nrPDB                                                           29   1.6  
5GM6-Y nrPDB                                                           29   1.7  
2OUK-A nrPDB                                                           29   1.7  
4XGC-D nrPDB                                                           29   1.7  
1IM2-A nrPDB                                                           29   1.8  
1E94-E nrPDB                                                           29   1.8  
1M0T-A nrPDB                                                           29   1.8  
1OFI-A nrPDB                                                           29   1.9  
6BZR-B nrPDB                                                           29   1.9  
4MRS-A nrPDB                                                           29   2.0  
5LKM-A nrPDB                                                           29   2.0  
5L22-B nrPDB                                                           29   2.0  
1KAG-A nrPDB                                                           29   2.0  
2WJI-A nrPDB                                                           29   2.1  
1IHU-A nrPDB                                                           29   2.1  
5LF0-A nrPDB                                                           29   2.1  
4G1U-C nrPDB                                                           29   2.1  
4N1A-A nrPDB                                                           28   2.2  
6MFU-A nrPDB                                                           28   2.3  
5NIK-J nrPDB                                                           28   2.4  
4DBL-C nrPDB                                                           28   2.4  
2VP0-A nrPDB                                                           28   2.4  
5LJA-A nrPDB                                                           28   2.4  
4TLD-A nrPDB                                                           28   2.4  
2ZBL-A nrPDB                                                           28   2.5  
2PCL-A nrPDB                                                           28   2.5  
2P65-A nrPDB                                                           28   2.5  
5A9Z-CA nrPDB                                                          28   2.7  
3S1A-A nrPDB                                                           28   2.7  
6FA9-A nrPDB                                                           28   2.7  
4Z8X-A nrPDB                                                           28   2.9  
5GKO-A nrPDB                                                           28   2.9  
5OWV-A nrPDB                                                           28   3.0  
2XTP-A nrPDB                                                           28   3.1  
2BDT-A nrPDB                                                           28   3.1  
1ZVD-A nrPDB                                                           28   3.1  
5B57-C nrPDB                                                           28   3.3  
3MKR-B nrPDB                                                           28   3.3  
3EPJ-A nrPDB                                                           28   3.4  
2IT1-A nrPDB                                                           28   3.4  
1IY1-A nrPDB                                                           28   3.4  
5ZME-A nrPDB                                                           28   3.5  
5TV4-A nrPDB                                                           28   3.6  
2DHR-A nrPDB                                                           28   3.6  
1Z6G-A nrPDB                                                           28   3.6  
1EZ4-A nrPDB                                                           28   3.6  
5JSZ-B nrPDB                                                           28   3.7  
6QUZ-A nrPDB                                                           28   3.7  
5DO7-A nrPDB                                                           28   4.0  
5NP9-A nrPDB                                                           28   4.0  
4XIG-S nrPDB                                                           28   4.0  
3NHB-A nrPDB                                                           28   4.1  
5CDF-E nrPDB                                                           28   4.2  
6C2V-A nrPDB                                                           28   4.3  
3WMF-A nrPDB                                                           28   4.4  
4Q7K-A nrPDB                                                           28   4.4  
6FOC-D nrPDB                                                           28   4.6  
3WBG-A nrPDB                                                           28   4.6  
1S0U-A nrPDB                                                           27   4.8  
6FKI-F nrPDB                                                           27   4.8  
2W6I-D nrPDB                                                           27   4.8  
1LVG-A nrPDB                                                           27   4.9  
1JAL-A nrPDB                                                           27   4.9  
6CEP-A nrPDB                                                           27   5.0  
1WDT-A nrPDB                                                           27   5.0  
5EUM-A nrPDB                                                           27   5.0  
2XND-D nrPDB                                                           27   5.4  
4XD7-D nrPDB                                                           27   5.4  
3M6A-A nrPDB                                                           27   5.5  
6AQ1-A nrPDB                                                           27   5.6  
2FGK-A nrPDB                                                           27   6.3  
4O0M-A nrPDB                                                           27   6.6  
4F4J-A nrPDB                                                           27   6.8  
3N5F-A nrPDB                                                           27   7.3  
5JWO-A nrPDB                                                           27   7.4  
5TY0-A nrPDB                                                           27   8.1  
3PEN-A nrPDB                                                           26   8.9  
5ANB-A nrPDB                                                           26   9.0  
2KHQ-A nrPDB                                                           26   9.1  
1OXV-A nrPDB                                                           26   9.2  
2XTZ-A nrPDB                                                           26   9.8  

>2J1L-A nrPDB
          Length = 214

 Score =  284 bits (726), Expect = 2e-77,   Method: Composition-based stats.
 Identities = 190/191 (99%), Positives = 190/191 (99%)

Query: 7   AGEEAPPGVRSVKVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMVNLQVKGKPVH 66
           AGEEAPPGVRSVKVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMVNLQVKGKPVH
Sbjct: 24  AGEEAPPGVRSVKVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMVNLQVKGKPVH 83

Query: 67  LHIWDTAGQDDYDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVNHFCKKVPIIV 126
           LHIWDTAGQDDYDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVNHFCKKVPIIV
Sbjct: 84  LHIWDTAGQDDYDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVNHFCKKVPIIV 143

Query: 127 VGCKTDLCKDKSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNVHAVFQEA 186
           VGCKTDL KDKSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNVHAVFQEA
Sbjct: 144 VGCKTDLRKDKSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNVHAVFQEA 203

Query: 187 AEVALSSRGRN 197
           AEVALSSRGRN
Sbjct: 204 AEVALSSRGRN 214


>5C2K-A nrPDB
          Length = 415

 Score =  259 bits (661), Expect = 8e-70,   Method: Composition-based stats.
 Identities = 96/189 (50%), Positives = 126/189 (66%), Gaps = 1/189 (0%)

Query: 6   AAGEEAPPGVRSVKVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMVNLQVKGKPV 65
           ++G      +R  K+V+VGDG CGKT LL+VF+   FPE Y PTVFE Y+ +++V GK V
Sbjct: 2   SSGSSGMAAIRK-KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQV 60

Query: 66  HLHIWDTAGQDDYDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVNHFCKKVPII 125
            L +WDTAGQ+DYDRLRPL YPD  V+L+CF + SP+S +NI  +W PEV HFC  VPII
Sbjct: 61  ELALWDTAGQEDYDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVKHFCPNVPII 120

Query: 126 VVGCKTDLCKDKSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNVHAVFQE 185
           +VG K DL  D+    +L +   EPV    G++MA  +GA  Y+ECSA+  D V  VF+ 
Sbjct: 121 LVGNKKDLRNDEHTRRELAKMKQEPVKPEEGRDMANRIGAFGYMECSAKTKDGVREVFEM 180

Query: 186 AAEVALSSR 194
           A   AL +R
Sbjct: 181 ATRAALQAR 189


>5JCP-B nrPDB
          Length = 419

 Score =  257 bits (656), Expect = 4e-69,   Method: Composition-based stats.
 Identities = 96/192 (50%), Positives = 125/192 (65%)

Query: 2   TAAQAAGEEAPPGVRSVKVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMVNLQVK 61
           TA+ + G E        K+V+VGDG CGKT LL+V +   FPE Y PTVFE Y+ +++V 
Sbjct: 228 TASNSPGIEGLSAAIRKKLVIVGDGACGKTCLLIVNSKDQFPEVYVPTVFENYVADIEVD 287

Query: 62  GKPVHLHIWDTAGQDDYDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVNHFCKK 121
           GK V L +WDTAGQ+DYDRLRPL YPD  V+L+CF + SP+S +NI  +W PEV HFC  
Sbjct: 288 GKQVELALWDTAGQEDYDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVKHFCPN 347

Query: 122 VPIIVVGCKTDLCKDKSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNVHA 181
           VPII+VG K DL  D+    +L +   EPV    G++MA  +GA  Y+ECSA+  D V  
Sbjct: 348 VPIILVGNKKDLRNDEHTRRELAKMKQEPVKPEEGRDMANRIGAFGYMECSAKTKDGVRE 407

Query: 182 VFQEAAEVALSS 193
           VF+ A   AL +
Sbjct: 408 VFEMATRAALQA 419


>5ZHX-e nrPDB
          Length = 198

 Score =  254 bits (649), Expect = 2e-68,   Method: Composition-based stats.
 Identities = 95/187 (50%), Positives = 122/187 (65%)

Query: 8   GEEAPPGVRSVKVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMVNLQVKGKPVHL 67
           G          K+V+VGDG CGKT LL+VF+   FPE Y PTVFE Y+ +++V GK V L
Sbjct: 1   GPLGSMAAIRKKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQVEL 60

Query: 68  HIWDTAGQDDYDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVNHFCKKVPIIVV 127
            +WDTAGQ+DYDRLRPL YPD  V+L+CF + SP+S +NI  +W PEV HFC  VPII+V
Sbjct: 61  ALWDTAGQEDYDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVKHFCPNVPIILV 120

Query: 128 GCKTDLCKDKSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNVHAVFQEAA 187
           G K DL  D+    +L +   EPV    G++MA  +GA  Y+ECSA+  D V  VF+ A 
Sbjct: 121 GNKKDLRNDEHTRRELAKMKQEPVKPEEGRDMANRIGAFGYMECSAKTKDGVREVFEMAT 180

Query: 188 EVALSSR 194
             AL +R
Sbjct: 181 RAALQAR 187


>3RYT-C nrPDB
          Length = 180

 Score =  250 bits (639), Expect = 3e-67,   Method: Composition-based stats.
 Identities = 92/179 (51%), Positives = 117/179 (65%)

Query: 13  PGVRSVKVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMVNLQVKGKPVHLHIWDT 72
           P ++++K V+VGDG  GKT LL+ +   AFP  Y PTVF+ Y  N+ V GKPV+L +WDT
Sbjct: 2   PHMQAIKCVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDGKPVNLGLWDT 61

Query: 73  AGQDDYDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVNHFCKKVPIIVVGCKTD 132
           AG +DYDRLRPL YP   V L+CF + SP SF+N+  +WYPEV H C   PII+VG K D
Sbjct: 62  AGLEDYDRLRPLSYPQTDVFLICFSLVSPASFENVRAKWYPEVRHHCPNTPIILVGTKLD 121

Query: 133 LCKDKSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNVHAVFQEAAEVAL 191
           L  DK  + KL+   L P+TY +G  MA+ +GAV YLECSA     +  VF EA    L
Sbjct: 122 LRDDKDTIEKLKEKKLTPITYPQGLAMAKEIGAVKYLECSALTQRGLKTVFDEAIRAVL 180


>3TH5-A nrPDB
          Length = 204

 Score =  248 bits (633), Expect = 1e-66,   Method: Composition-based stats.
 Identities = 92/176 (52%), Positives = 116/176 (65%)

Query: 16  RSVKVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMVNLQVKGKPVHLHIWDTAGQ 75
           +++K V+VGDG  GKT LL+ +   AFP  Y PTVF+ Y  N+ V GKPV+L +WDTAGQ
Sbjct: 29  QAIKCVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDGKPVNLGLWDTAGQ 88

Query: 76  DDYDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVNHFCKKVPIIVVGCKTDLCK 135
           +DYDRLRPL YP   V L+CF + SP SF+N+  +WYPEV H C   PII+VG K DL  
Sbjct: 89  EDYDRLRPLSYPQTDVFLICFSLVSPASFENVRAKWYPEVRHHCPNTPIILVGTKLDLRD 148

Query: 136 DKSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNVHAVFQEAAEVAL 191
           DK  + KL+   L P+TY +G  MA+ +GAV YLECSA     +  VF EA    L
Sbjct: 149 DKDTIEKLKEKKLTPITYPQGLAMAKEIGAVKYLECSALTQRGLKTVFDEAIRAVL 204


>3VHL-B nrPDB
          Length = 195

 Score =  245 bits (625), Expect = 1e-65,   Method: Composition-based stats.
 Identities = 84/194 (43%), Positives = 117/194 (60%)

Query: 8   GEEAPPGVRSVKVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMVNLQVKGKPVHL 67
           G     G++++K V+VGDG  GK  LL+ +    FP  Y PTVF+ Y V + + G+P  L
Sbjct: 1   GSSGSSGMQTIKCVVVGDGAVGKNCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTL 60

Query: 68  HIWDTAGQDDYDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVNHFCKKVPIIVV 127
            ++DTAGQ+DYDRLRPL YP   V L+CF V SP+SF+N+  +W PE+ H C K P ++V
Sbjct: 61  GLFDTAGQEDYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHCPKTPFLLV 120

Query: 128 GCKTDLCKDKSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNVHAVFQEAA 187
           G + DL  D S + KL +N  +P+T    +++AR + AV Y+ECSA     +  VF EA 
Sbjct: 121 GTQIDLRDDPSTIEKLAKNKQKPITPETAEKLARDLKAVKYVECSALTQKGLKNVFDEAI 180

Query: 188 EVALSSRGRNFWRR 201
             AL        RR
Sbjct: 181 LAALEPPEPKKSRR 194


>2WKQ-A nrPDB
          Length = 332

 Score =  242 bits (619), Expect = 7e-65,   Method: Composition-based stats.
 Identities = 90/177 (50%), Positives = 112/177 (63%)

Query: 18  VKVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMVNLQVKGKPVHLHIWDTAGQDD 77
           +K V+VGDG  GKT LL+ +   AFP  Y PTVF+ Y  N+ V GKPV+L +WDTAG +D
Sbjct: 156 IKCVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDGKPVNLGLWDTAGLED 215

Query: 78  YDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVNHFCKKVPIIVVGCKTDLCKDK 137
           YDRLRPL YP   V L+CF + SP SF ++  +WYPEV H C   PII+VG K DL  DK
Sbjct: 216 YDRLRPLSYPQTDVFLICFSLVSPASFHHVRAKWYPEVRHHCPNTPIILVGTKLDLRDDK 275

Query: 138 SLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNVHAVFQEAAEVALSSR 194
             + KL+   L P+TY +G  MA+ +GAV YLECSA     +  VF EA    L   
Sbjct: 276 DTIEKLKEKKLTPITYPQGLAMAKEIGAVKYLECSALTQRGLKTVFDEAIRAVLCPP 332


>2FV8-A nrPDB
          Length = 207

 Score =  240 bits (614), Expect = 2e-64,   Method: Composition-based stats.
 Identities = 94/176 (53%), Positives = 118/176 (67%)

Query: 19  KVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMVNLQVKGKPVHLHIWDTAGQDDY 78
           K+V+VGDG CGKT LL+VF+   FPE Y PTVFE Y+ +++V GK V L +WDTAGQ+DY
Sbjct: 27  KLVVVGDGACGKTCLLIVFSKDEFPEVYVPTVFENYVADIEVDGKQVELALWDTAGQEDY 86

Query: 79  DRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVNHFCKKVPIIVVGCKTDLCKDKS 138
           DRLRPL YPD  V+L+CF V SP+S +NI  +W PEV HFC  VPII+V  K DL  D+ 
Sbjct: 87  DRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWVPEVKHFCPNVPIILVANKKDLRSDEH 146

Query: 139 LVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNVHAVFQEAAEVALSSR 194
           +  +L R   EPV    G+ MA  + A  YLECSA+  + V  VF+ A   AL  R
Sbjct: 147 VRTELARMKQEPVRTDDGRAMAVRIQAYDYLECSAKTKEGVREVFETATRAALQKR 202


>2W2X-A nrPDB
          Length = 185

 Score =  240 bits (613), Expect = 3e-64,   Method: Composition-based stats.
 Identities = 86/181 (47%), Positives = 114/181 (62%)

Query: 11  APPGVRSVKVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMVNLQVKGKPVHLHIW 70
              G +++K V+VGD   GKT LL+ +   AFP  Y PTVF+ Y  N+ V  KPV+L +W
Sbjct: 3   GSGGSQAIKCVVVGDVAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDSKPVNLGLW 62

Query: 71  DTAGQDDYDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVNHFCKKVPIIVVGCK 130
           DTAGQ+DYDRLRPL YP   V L+CF + SP S++N+  +W+PEV H C   PII+VG K
Sbjct: 63  DTAGQEDYDRLRPLSYPQTDVFLICFSLVSPASYENVRAKWFPEVRHHCPSTPIILVGTK 122

Query: 131 TDLCKDKSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNVHAVFQEAAEVA 190
            DL  DK  + KL+   L P+TY +G  +A+ + +V YLECSA     +  VF EA    
Sbjct: 123 LDLRDDKDTIEKLKEKKLAPITYPQGLALAKEIDSVKYLECSALTQRGLKTVFDEAIRAV 182

Query: 191 L 191
           L
Sbjct: 183 L 183


>2NTY-C nrPDB
          Length = 180

 Score =  240 bits (613), Expect = 3e-64,   Method: Composition-based stats.
 Identities = 77/182 (42%), Positives = 110/182 (60%), Gaps = 2/182 (1%)

Query: 12  PPGVRSVKVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMVNLQVKGKPVHLHIWD 71
               R +K V VGDG  GKT +L+ +    FP  Y PTVF+ +  N+ V G  V+L +WD
Sbjct: 1   MSASRFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGNTVNLGLWD 60

Query: 72  TAGQDDYDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVNHFCKKVPIIVVGCKT 131
           TAGQ+DY+RLRPL Y  A V +L F + S  S++N+  +W PE+ H+   VPII+VG K 
Sbjct: 61  TAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVAKKWIPELRHYAPGVPIILVGTKL 120

Query: 132 DLCKDKSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNVHAVFQEAAEVAL 191
           DL  DK     +   G  P+T ++G+E+ + +G+  Y+ECS++   NV AVF  A +V L
Sbjct: 121 DLRDDKQFF--IDHPGAVPITTNQGEELKKLIGSPIYIECSSKTQQNVKAVFDAAIKVVL 178

Query: 192 SS 193
             
Sbjct: 179 QP 180


>2WBL-C nrPDB
          Length = 180

 Score =  240 bits (613), Expect = 4e-64,   Method: Composition-based stats.
 Identities = 80/182 (43%), Positives = 109/182 (59%), Gaps = 2/182 (1%)

Query: 12  PPGVRSVKVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMVNLQVKGKPVHLHIWD 71
               R +K V VGDG  GKT +L+ +    FP  Y PTVF+ +  N+ V G  V+L +WD
Sbjct: 1   MSTARFIKCVTVGDGAVGKTCMLISYTGNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWD 60

Query: 72  TAGQDDYDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVNHFCKKVPIIVVGCKT 131
           TAGQ+DY+RLRPL Y  A V LL F + S  S++NI  +W PE+ H+   +PI++VG K 
Sbjct: 61  TAGQEDYNRLRPLSYRGADVFLLAFSLISKASYENIHKKWLPELKHYAPGIPIVLVGTKL 120

Query: 132 DLCKDKSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNVHAVFQEAAEVAL 191
           DL  DK  +      G   +T  +G+E+ + +GAV YLECS++   NV AVF  A  VAL
Sbjct: 121 DLRDDKQFLKD--HPGAASITTAQGEELRKMIGAVRYLECSSKTQQNVKAVFDTAIRVAL 178

Query: 192 SS 193
             
Sbjct: 179 RP 180


>1RYH-A nrPDB
          Length = 203

 Score =  240 bits (612), Expect = 4e-64,   Method: Composition-based stats.
 Identities = 93/199 (46%), Positives = 118/199 (59%), Gaps = 19/199 (9%)

Query: 15  VRSVKVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMVNLQVKGKPVHLHIWDTAG 74
           ++++K V+VGDG  GKT LL+ +   AFP  Y PTVF+ Y  N+ V GKPV+L +WDTAG
Sbjct: 3   MQAIKCVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDGKPVNLGLWDTAG 62

Query: 75  QDDYDRLRPLFYPD-------------------ASVLLLCFDVTSPNSFDNIFNRWYPEV 115
           Q+DYDRLRPL YP                    A V L+CF + SP SF+N+  +WYPEV
Sbjct: 63  QEDYDRLRPLSYPQTVGETYGKDITSRGKDKPIADVFLICFSLVSPASFENVRAKWYPEV 122

Query: 116 NHFCKKVPIIVVGCKTDLCKDKSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARL 175
            H C   PII+VG K DL  DK  + KL+   L P+TY +G  MA+ +GAV YLECSA  
Sbjct: 123 RHHCPNTPIILVGTKLDLRDDKDTIEKLKEKKLTPITYPQGLAMAKEIGAVKYLECSALT 182

Query: 176 HDNVHAVFQEAAEVALSSR 194
              +  VF EA    L   
Sbjct: 183 QRGLKTVFDEAIRAVLCPP 201


>3BWD-D nrPDB
          Length = 182

 Score =  238 bits (608), Expect = 1e-63,   Method: Composition-based stats.
 Identities = 78/182 (42%), Positives = 109/182 (59%), Gaps = 2/182 (1%)

Query: 12  PPGVRSVKVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMVNLQVKGKPVHLHIWD 71
               R +K V VGDG  GKT LL+ +    FP  Y PTVF+ +  N+ V G  V+L +WD
Sbjct: 3   MSASRFIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVNGATVNLGLWD 62

Query: 72  TAGQDDYDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVNHFCKKVPIIVVGCKT 131
           TAGQ+DY+RLRPL Y  A V +L F + S  S++N+  +W PE+ H+   VPI++VG K 
Sbjct: 63  TAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGVPIVLVGTKL 122

Query: 132 DLCKDKSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNVHAVFQEAAEVAL 191
           DL  DK     +   G  P+T  +G+E+ + +GA AY+ECS++  +NV  VF  A  V L
Sbjct: 123 DLRDDKQFF--IDHPGAVPITTVQGEELKKLIGAPAYIECSSKSQENVKGVFDAAIRVVL 180

Query: 192 SS 193
             
Sbjct: 181 QP 182


>2J0V-A nrPDB
          Length = 212

 Score =  237 bits (606), Expect = 2e-63,   Method: Composition-based stats.
 Identities = 75/186 (40%), Positives = 108/186 (58%), Gaps = 4/186 (2%)

Query: 12  PPGVRSVKVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMVNLQVKGKPVHLHIWD 71
               + +K V VGDG  GKT +L+ +    FP  Y PTVF+ +  N+ V G+ V+L +WD
Sbjct: 4   MSVSKFIKCVTVGDGAVGKTCMLICYTSNKFPTDYIPTVFDNFSANVAVDGQIVNLGLWD 63

Query: 72  TAGQDDYDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVNHFCKKVPIIVVGCKT 131
           TAGQ+DY RLRPL Y  A + +L F + S  S++N+  +W PE+  F   VPI++VG K 
Sbjct: 64  TAGQEDYSRLRPLSYRGADIFVLAFSLISKASYENVLKKWMPELRRFAPNVPIVLVGTKL 123

Query: 132 DLCKDKSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNVHAVFQEAAEVAL 191
           DL  DK  +          +T  +G+E+ + +GA AY+ECS++   NV AVF  A +V L
Sbjct: 124 DLRDDKGYLAD----HTNVITSTQGEELRKQIGAAAYIECSSKTQQNVKAVFDTAIKVVL 179

Query: 192 SSRGRN 197
               R 
Sbjct: 180 QPPRRK 185


>3A58-B nrPDB
          Length = 188

 Score =  235 bits (601), Expect = 8e-63,   Method: Composition-based stats.
 Identities = 90/177 (50%), Positives = 122/177 (68%)

Query: 19  KVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMVNLQVKGKPVHLHIWDTAGQDDY 78
           K+V+VGDG CGKT LL+V + G FPE Y PTVFE Y+ +++V G+ V L +WDTAGQ+DY
Sbjct: 12  KLVIVGDGACGKTCLLIVNSKGQFPEVYVPTVFENYVADVEVDGRRVELALWDTAGQEDY 71

Query: 79  DRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVNHFCKKVPIIVVGCKTDLCKDKS 138
           DRLRPL YPD++V+L+CF +  P+S +N+  +W  EV HFC+ VPII+VGCK DL  D  
Sbjct: 72  DRLRPLSYPDSNVVLICFSIDLPDSLENVQEKWIAEVLHFCQGVPIILVGCKVDLRNDPQ 131

Query: 139 LVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNVHAVFQEAAEVALSSRG 195
            + +LR+ G +PVT   GQ +A  +GA  Y ECSA+    V  VF+ A   +L  + 
Sbjct: 132 TIEQLRQEGQQPVTSQEGQSVADQIGATGYYECSAKTGYGVREVFEAATRASLMGKS 188


>5ZVP-A nrPDB
          Length = 181

 Score =  235 bits (599), Expect = 1e-62,   Method: Composition-based stats.
 Identities = 92/175 (52%), Positives = 125/175 (71%)

Query: 19  KVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMVNLQVKGKPVHLHIWDTAGQDDY 78
           K+V+VGDG CGKT LL+V + G FPE Y PTVFE Y+ +++V GK V L +WDTAGQ+DY
Sbjct: 7   KLVIVGDGACGKTCLLIVNSKGTFPEVYVPTVFENYVADVEVDGKHVELALWDTAGQEDY 66

Query: 79  DRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVNHFCKKVPIIVVGCKTDLCKDKS 138
           DRLRPL YPD+ V+L+CF + SP+S DN+  +W  EV HFC+ +PII+VGCK DL  D  
Sbjct: 67  DRLRPLSYPDSHVILICFAIDSPDSLDNVQEKWISEVLHFCQGLPIILVGCKKDLRHDPK 126

Query: 139 LVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNVHAVFQEAAEVALSS 193
            + +L +   +PVT  +G+E+ + +GA  YLECSAR ++ V  VF+ A   AL +
Sbjct: 127 TIEELHKTSQKPVTPEQGEEVRKKIGAYKYLECSARTNEGVREVFEAATRAALLT 181


>2ATX-A nrPDB
          Length = 194

 Score =  233 bits (594), Expect = 5e-62,   Method: Composition-based stats.
 Identities = 80/181 (44%), Positives = 111/181 (61%)

Query: 13  PGVRSVKVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMVNLQVKGKPVHLHIWDT 72
           PG   +K V+VGDG  GKT LLM +A+ AFPE Y PTVF+ Y V++ V GK   L ++DT
Sbjct: 14  PGALMLKCVVVGDGAVGKTCLLMSYANDAFPEEYVPTVFDHYAVSVTVGGKQYLLGLYDT 73

Query: 73  AGQDDYDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVNHFCKKVPIIVVGCKTD 132
           AGQ+DYDRLRPL YP   V L+CF V +P SF N+   W PE+  +   VP +++G + D
Sbjct: 74  AGQEDYDRLRPLSYPMTDVFLICFSVVNPASFQNVKEEWVPELKEYAPNVPFLLIGTQID 133

Query: 133 LCKDKSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNVHAVFQEAAEVALS 192
           L  D   + +L     +P+   +GQ++A+ +GA  Y+ECSA     +  VF EA    L+
Sbjct: 134 LRDDPKTLARLNDMKEKPICVEQGQKLAKEIGACCYVECSALTQKGLKTVFDEAIIAILT 193

Query: 193 S 193
            
Sbjct: 194 P 194


>5VCU-A nrPDB
          Length = 208

 Score =  232 bits (593), Expect = 6e-62,   Method: Composition-based stats.
 Identities = 81/183 (44%), Positives = 118/183 (64%)

Query: 15  VRSVKVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMVNLQVKGKPVHLHIWDTAG 74
           + S+K V+VGDG  GKT+LL+ ++ G FPE Y PTVF+ Y  N+      V + ++DTAG
Sbjct: 9   MESIKCVVVGDGAVGKTALLIAYSSGCFPEDYVPTVFDNYNKNIPYGDGIVSIALYDTAG 68

Query: 75  QDDYDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVNHFCKKVPIIVVGCKTDLC 134
           Q+DYDRLRPL YPD  V L+CF + +PNS +N  ++W  E+ H+    PI++VG K DL 
Sbjct: 69  QEDYDRLRPLSYPDTDVFLVCFSLENPNSLENCHSKWAEELKHYNPDTPIVLVGTKLDLK 128

Query: 135 KDKSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNVHAVFQEAAEVALSSR 194
           KD+  V KL+   + PVT  +GQEM   + A  Y+ECSA+  +N+   F  A ++A+  R
Sbjct: 129 KDEEYVKKLKEKKISPVTTEQGQEMKDKIKACGYIECSAKTMENLTEAFNMAIDIAMKQR 188

Query: 195 GRN 197
            ++
Sbjct: 189 LKD 191


>4U5X-A nrPDB
          Length = 178

 Score =  230 bits (588), Expect = 2e-61,   Method: Composition-based stats.
 Identities = 73/177 (41%), Positives = 110/177 (62%), Gaps = 2/177 (1%)

Query: 16  RSVKVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMVNLQVKGKPVHLHIWDTAGQ 75
           R +K V VGDG  GKT +L+ +    FP  Y PTVF+ +  N+ V G  V+L +WDTAG 
Sbjct: 4   RFIKCVTVGDGAVGKTCMLICYTSNKFPTDYIPTVFDNFSANVSVDGSVVNLGLWDTAGL 63

Query: 76  DDYDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVNHFCKKVPIIVVGCKTDLCK 135
           +DY RLRPL Y  A V +L F + S  S++N+  +W PE+  F   VP+++VG K DL +
Sbjct: 64  EDYSRLRPLSYRGADVFILSFSLISRASYENVQKKWMPELRRFAPGVPVVLVGTKLDLRE 123

Query: 136 DKSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNVHAVFQEAAEVALS 192
           D++ +     + +  +T  +G+E+ + +GAVAY+ECS++   N+ AVF  A +V L 
Sbjct: 124 DRAYLADHPASSI--ITTEQGEELRKLIGAVAYIECSSKTQRNIKAVFDTAIKVVLQ 178


>4MIT-A nrPDB
          Length = 186

 Score =  220 bits (561), Expect = 3e-58,   Method: Composition-based stats.
 Identities = 81/179 (45%), Positives = 118/179 (65%)

Query: 15  VRSVKVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMVNLQVKGKPVHLHIWDTAG 74
             S+K+V+VGDG  GKT LL+ ++   FPE Y PTVF+ Y+V+L    + + L +WDTAG
Sbjct: 8   PTSIKLVVVGDGAVGKTCLLISYSIRKFPEDYIPTVFDNYVVSLTAGTRQIQLALWDTAG 67

Query: 75  QDDYDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVNHFCKKVPIIVVGCKTDLC 134
            ++YD+LRPL Y  AS+ L+CF VTS  S+DN+  +W+PEV HF  KVPII+VG K D  
Sbjct: 68  LEEYDQLRPLSYSSASIFLICFSVTSSVSYDNVITKWHPEVIHFAPKVPIILVGTKLDTR 127

Query: 135 KDKSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNVHAVFQEAAEVALSS 193
            D ++V +L   G+  +   +G+E+   + AV Y+ECSA+  +N+  VF EA +  L +
Sbjct: 128 NDPAIVKRLTEQGMTVINTAKGEELKNRIKAVKYIECSAKTSENLKTVFDEAVKTVLMN 186


>2Q3H-A nrPDB
          Length = 201

 Score =  218 bits (557), Expect = 9e-58,   Method: Composition-based stats.
 Identities = 72/170 (42%), Positives = 105/170 (61%)

Query: 18  VKVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMVNLQVKGKPVHLHIWDTAGQDD 77
           VK VLVGDG  GKTSL++ +    +P  Y PT F+ +   + V G+PV L + DTAGQD+
Sbjct: 21  VKCVLVGDGAVGKTSLVVSYTTNGYPTEYIPTAFDNFSAVVSVDGRPVRLQLCDTAGQDE 80

Query: 78  YDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVNHFCKKVPIIVVGCKTDLCKDK 137
           +D+LRPL Y +  + LLCF V SP+SF N+  +W PE+   C K PII+VG ++DL +D 
Sbjct: 81  FDKLRPLCYTNTDIFLLCFSVVSPSSFQNVSEKWVPEIRCHCPKAPIILVGTQSDLREDV 140

Query: 138 SLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNVHAVFQEAA 187
            ++ +L +   +PV     + +A  + A +Y+ECSA    N+  VF  A 
Sbjct: 141 KVLIELDKCKEKPVPEEAAKLLAEEIKAASYIECSALTQKNLKEVFDAAI 190


>2A5J-A nrPDB
          Length = 191

 Score =  214 bits (546), Expect = 2e-56,   Method: Composition-based stats.
 Identities = 53/198 (26%), Positives = 90/198 (45%), Gaps = 22/198 (11%)

Query: 10  EAPPGVRSVKVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMVN-LQVKGKPVHLH 68
             P G    K +++GD G GK+ LL+ F D  F   +  T+   +    + + GK + L 
Sbjct: 14  LVPRGSYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVNIDGKQIKLQ 73

Query: 69  IWDTAGQDDYDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVNHFCKKVPIIVVG 128
           IWDTAGQ+ +  +   +Y  A+  LL +D+T   +F+++ +       H    + I+++G
Sbjct: 74  IWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLTSWLEDARQHSSSNMVIMLIG 133

Query: 129 CKTDLCKDKSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNVHAVFQEAAE 188
            K+DL   +             V    G+  AR  G + ++E SA+   NV   F   A 
Sbjct: 134 NKSDLESRRD------------VKREEGEAFAREHGLI-FMETSAKTACNVEEAFINTA- 179

Query: 189 VALSSRGRNFWRRITQGF 206
                  +  +R+I QG 
Sbjct: 180 -------KEIYRKIQQGL 190


>5SZI-A nrPDB
          Length = 209

 Score =  212 bits (540), Expect = 8e-56,   Method: Composition-based stats.
 Identities = 55/200 (27%), Positives = 96/200 (48%), Gaps = 16/200 (8%)

Query: 8   GEEAPPGVRSVKVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMV-NLQVKGKPVH 66
           G  A       K++L+GD G GKT +L  F++ AF  ++  T+   + +  +++ GK + 
Sbjct: 1   GHMAKTYDYLFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKRIK 60

Query: 67  LHIWDTAGQDDYDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVNHFCK-KVPII 125
           L IWDTAGQ+ +  +   +Y  A  ++L +D+T+  SFDNI N W   +       V  +
Sbjct: 61  LQIWDTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIRN-WIRNIEEHASADVEKM 119

Query: 126 VVGCKTDLCKDKSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNVHAVFQE 185
           ++G K D+   +             V+  RG+++A   G + ++E SA+ + NV   F  
Sbjct: 120 ILGNKCDVNDKRQ------------VSKERGEKLALDYG-IKFMETSAKANINVENAFFT 166

Query: 186 AAEVALSSRGRNFWRRITQG 205
            A    +   +       QG
Sbjct: 167 LARDIKAKMDKKLEGNSPQG 186


>3L0I-B nrPDB
          Length = 199

 Score =  212 bits (540), Expect = 9e-56,   Method: Composition-based stats.
 Identities = 59/189 (31%), Positives = 94/189 (49%), Gaps = 16/189 (8%)

Query: 9   EEAPPGVRSVKVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMV-NLQVKGKPVHL 67
              P      K++L+GD G GK+ LL+ FAD  + ESY  T+   + +  +++ GK + L
Sbjct: 25  SMNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKL 84

Query: 68  HIWDTAGQDDYDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVNHFC-KKVPIIV 126
            IWDTAGQ+ +  +   +Y  A  +++ +DVT   SF+N+  +W  E++ +  + V  ++
Sbjct: 85  QIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNV-KQWLQEIDRYASENVNKLL 143

Query: 127 VGCKTDLCKDKSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNVHAVFQEA 186
           VG K DL   K             V Y   +E A S+G + +LE SA+   NV   F   
Sbjct: 144 VGNKCDLTTKK------------VVDYTTAKEFADSLG-IPFLETSAKNATNVEQSFMTM 190

Query: 187 AEVALSSRG 195
           A       G
Sbjct: 191 AAEIKKRMG 199


>3CUE-F nrPDB
          Length = 206

 Score =  212 bits (540), Expect = 9e-56,   Method: Composition-based stats.
 Identities = 51/189 (26%), Positives = 87/189 (46%), Gaps = 16/189 (8%)

Query: 18  VKVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYM-VNLQVKGKPVHLHIWDTAGQD 76
            K++L+G+ G GK+ LL+ F+D  +   Y  T+   +    +++ GK V L IWDTAGQ+
Sbjct: 9   FKLLLIGNSGVGKSCLLLRFSDDTYTNDYISTIGVDFKIKTVELDGKTVKLQIWDTAGQE 68

Query: 77  DYDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVNHFCKKVPI-IVVGCKTDLCK 135
            +  +   +Y  +  +++ +DVT   SF+ +   W  E++ +     + ++VG K DL  
Sbjct: 69  RFRTITSSYYRGSHGIIIVYDVTDQESFNGV-KMWLQEIDRYATSTVLKLLVGNKCDLKD 127

Query: 136 DKSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNVHAVFQEAAEVALSSRG 195
            +             V Y   +E A +   + +LE SA    NV   F   A     S  
Sbjct: 128 KR------------VVEYDVAKEFADA-NKMPFLETSALDSTNVEDAFLTMARQIKESMS 174

Query: 196 RNFWRRITQ 204
           +      TQ
Sbjct: 175 QQNLNETTQ 183


>4LHX-A nrPDB
          Length = 186

 Score =  212 bits (540), Expect = 1e-55,   Method: Composition-based stats.
 Identities = 55/200 (27%), Positives = 96/200 (48%), Gaps = 16/200 (8%)

Query: 8   GEEAPPGVRSVKVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMV-NLQVKGKPVH 66
           G  A       K++L+GD G GKT +L  F++ AF  ++  T+   + +  +++ GK + 
Sbjct: 1   GHMAKTYDYLFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKRIK 60

Query: 67  LHIWDTAGQDDYDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVNHFCK-KVPII 125
           L IWDTAGQ+ +  +   +Y  A  ++L +D+T+  SFDNI N W   +       V  +
Sbjct: 61  LQIWDTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIRN-WIRNIEEHASADVEKM 119

Query: 126 VVGCKTDLCKDKSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNVHAVFQE 185
           ++G K D+   +             V+  RG+++A   G + ++E SA+ + NV   F  
Sbjct: 120 ILGNKCDVNDKRQ------------VSKERGEKLALDYG-IKFMETSAKANINVENAFFT 166

Query: 186 AAEVALSSRGRNFWRRITQG 205
            A    +   +       QG
Sbjct: 167 LARDIKAKMDKKLEGNSPQG 186


>5SZH-B nrPDB
          Length = 203

 Score =  212 bits (539), Expect = 1e-55,   Method: Composition-based stats.
 Identities = 58/191 (30%), Positives = 94/191 (49%), Gaps = 16/191 (8%)

Query: 8   GEEAPPGVRSVKVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMV-NLQVKGKPVH 66
           G   P      K++L+GD G GK+ LL+ FAD  + ESY  T+   + +  +++ GK + 
Sbjct: 1   GHMNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIK 60

Query: 67  LHIWDTAGQDDYDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVNHFC-KKVPII 125
           L IWDTAGQ+ +  +   +Y  A  +++ +DVT   S+ N+  +W  E++ +  + V  +
Sbjct: 61  LQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESYANV-KQWLQEIDRYASENVNKL 119

Query: 126 VVGCKTDLCKDKSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNVHAVFQE 185
           +VG K+DL   K             V     +E A S+G + +LE SA+   NV   F  
Sbjct: 120 LVGNKSDLTTKK------------VVDNTTAKEFADSLG-IPFLETSAKNATNVEQAFMT 166

Query: 186 AAEVALSSRGR 196
            A       G 
Sbjct: 167 MAAEIKKRMGP 177


>2RHD-A nrPDB
          Length = 175

 Score =  212 bits (539), Expect = 1e-55,   Method: Composition-based stats.
 Identities = 56/178 (31%), Positives = 93/178 (52%), Gaps = 16/178 (8%)

Query: 18  VKVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMV-NLQVKGKPVHLHIWDTAGQD 76
            K++L+GD G GK+ LL+ FAD  + +SY  T+   + +  + ++ K V L IWDTAGQ+
Sbjct: 10  FKLLLIGDSGVGKSCLLLRFADDTYTDSYISTIGVDFKIRTISLENKTVKLQIWDTAGQE 69

Query: 77  DYDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVNHFC-KKVPIIVVGCKTDLCK 135
            +  +   +Y  A  +++ +DVT  +SFDN+  +W  E++ +  + V  ++VG K DL  
Sbjct: 70  RFRTITSSYYRGAHGIIIVYDVTDRDSFDNV-KQWIQEIDRYAMENVNKLLVGNKCDLVS 128

Query: 136 DKSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNVHAVFQEAAEVALSS 193
            +             VT   G+E+A S G + ++E SA+   NV   F   A      
Sbjct: 129 KR------------VVTSDEGRELADSHG-IKFIETSAKNAYNVEQAFHTMAGEIKKR 173


>1YZN-A nrPDB
          Length = 185

 Score =  208 bits (531), Expect = 1e-54,   Method: Composition-based stats.
 Identities = 52/191 (27%), Positives = 87/191 (45%), Gaps = 19/191 (9%)

Query: 8   GEEAPPGVRS---VKVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYM-VNLQVKGK 63
           G   P G       K++L+G+ G GK+ LL+ F+D  +   Y  T+   +    +++ GK
Sbjct: 9   GSLVPRGSEYDYLFKLLLIGNSGVGKSCLLLRFSDDTYTNDYISTIGVDFKIKTVELDGK 68

Query: 64  PVHLHIWDTAGQDDYDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVNHFCKKVP 123
            V L IWDTAGQ+ +  +   +Y  +  +++ +DVT   SF+ +   W  E++ +     
Sbjct: 69  TVKLQIWDTAGQERFRTITSSYYRGSHGIIIVYDVTDQESFNGV-KMWLQEIDRYATSTV 127

Query: 124 I-IVVGCKTDLCKDKSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNVHAV 182
           + ++VG K DL   +             V Y   +E A +   + +LE SA    NV   
Sbjct: 128 LKLLVGNKCDLKDKR------------VVEYDVAKEFADA-NKMPFLETSALDSTNVEDA 174

Query: 183 FQEAAEVALSS 193
           F   A     S
Sbjct: 175 FLTMARQIKES 185


>6O62-A nrPDB
          Length = 184

 Score =  207 bits (528), Expect = 2e-54,   Method: Composition-based stats.
 Identities = 56/187 (29%), Positives = 94/187 (50%), Gaps = 14/187 (7%)

Query: 5   QAAGEEAPPGVRSVKVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMV-NLQVKGK 63
              G  +      +K++LVGD G GK+ LL+ F +  F  S+  T+   + +  ++ KGK
Sbjct: 2   SGKGTSSRAYDMIMKLLLVGDSGVGKSCLLLRFVEDKFNPSFITTIGIDFKIRTIESKGK 61

Query: 64  PVHLHIWDTAGQDDYDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVNHFCKKVP 123
            + L +WDTAGQ+ +  +   +Y  A  ++L +DVT   SF+N+ N +     H  +   
Sbjct: 62  RIKLQVWDTAGQERFRTITTAYYRGAMGIVLIYDVTDSRSFENVENWFQTVTQHANEDAQ 121

Query: 124 IIVVGCKTDLCKDKSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNVHAVF 183
           I +VG K D                  V+  +GQE+A  +  V +LE SA+ ++NV ++F
Sbjct: 122 IFLVGNKCD------------DEVNRQVSKEQGQELAAKLN-VPFLEASAKSNENVDSIF 168

Query: 184 QEAAEVA 190
            E A + 
Sbjct: 169 YELASII 175


>1GWN-A nrPDB
          Length = 205

 Score =  207 bits (526), Expect = 4e-54,   Method: Composition-based stats.
 Identities = 74/185 (40%), Positives = 112/185 (60%), Gaps = 1/185 (0%)

Query: 10  EAPPGVRSVKVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMVNLQVKGKPVHLHI 69
             P      K+V+VGD  CGKT+LL VFA   FPE+Y PTVFE Y  + ++  + + L +
Sbjct: 21  MDPNQNVKCKIVVVGDSQCGKTALLHVFAKDCFPENYVPTVFENYTASFEIDTQRIELSL 80

Query: 70  WDTAGQDDYDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVNHFCKKVPIIVVGC 129
           WDT+G   YD +RPL YPD+  +L+CFD++ P + D++  +W  E+  FC    +++VGC
Sbjct: 81  WDTSGSPYYDNVRPLSYPDSDAVLICFDISRPETLDSVLKKWKGEIQEFCPNTKMLLVGC 140

Query: 130 KTDLCKDKSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDN-VHAVFQEAAE 188
           K+DL  D S + +L  +   PV+Y +G  MA+ +GA  Y+ECSA   +N V  +F  A  
Sbjct: 141 KSDLRTDVSTLVELSNHRQTPVSYDQGANMAKQIGAATYIECSALQSENSVRDIFHVATL 200

Query: 189 VALSS 193
             ++ 
Sbjct: 201 ACVNK 205


>1Z0A-A nrPDB
          Length = 174

 Score =  207 bits (526), Expect = 4e-54,   Method: Composition-based stats.
 Identities = 48/184 (26%), Positives = 83/184 (45%), Gaps = 14/184 (7%)

Query: 8   GEEAPPGVRSVKVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMVN-LQVKGKPVH 66
           G          K +++GD G GK+ LL+ F D  F   +  T+   +    + + GK + 
Sbjct: 1   GPLGSAYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIK 60

Query: 67  LHIWDTAGQDDYDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVNHFCKKVPIIV 126
           L IWDTAGQ+ +  +   +Y  A+  LL +D+T  ++F+++         H    + I++
Sbjct: 61  LQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLTTWLEDARQHSNSNMVIML 120

Query: 127 VGCKTDLCKDKSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNVHAVFQEA 186
           +G K+DL   +             V    G+  AR  G + ++E SA+   NV   F   
Sbjct: 121 IGNKSDLESRR------------EVKKEEGEAFAREHGLI-FMETSAKTASNVEEAFINT 167

Query: 187 AEVA 190
           A+  
Sbjct: 168 AKEI 171


>1M7B-A nrPDB
          Length = 184

 Score =  206 bits (525), Expect = 5e-54,   Method: Composition-based stats.
 Identities = 73/178 (41%), Positives = 111/178 (62%), Gaps = 1/178 (0%)

Query: 17  SVKVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMVNLQVKGKPVHLHIWDTAGQD 76
             K+V+VGD  CGKT+LL VFA   FPE+Y PTVFE Y  + ++  + + L +WDT+G  
Sbjct: 7   KCKIVVVGDSQCGKTALLHVFAKDCFPENYVPTVFENYTASFEIDTQRIELSLWDTSGSP 66

Query: 77  DYDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVNHFCKKVPIIVVGCKTDLCKD 136
            YD +RPL YPD+  +L+CFD++ P + D++  +W  E+  FC    +++VGCK+DL  D
Sbjct: 67  YYDNVRPLSYPDSDAVLICFDISRPETLDSVLKKWKGEIQEFCPNTKMLLVGCKSDLRTD 126

Query: 137 KSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDN-VHAVFQEAAEVALSS 193
            S + +L  +   PV+Y +G  MA+ +GA  Y+ECSA   +N V  +F  A    ++ 
Sbjct: 127 VSTLVELSNHRQTPVSYDQGANMAKQIGAATYIECSALQSENSVRDIFHVATLACVNK 184


>4M8N-E nrPDB
          Length = 199

 Score =  206 bits (525), Expect = 6e-54,   Method: Composition-based stats.
 Identities = 52/179 (29%), Positives = 89/179 (49%), Gaps = 13/179 (7%)

Query: 13  PGVRSVKVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMVNLQVKGKPVHLHIWDT 72
           P +R  K+V++G GG GK++L + F  G F E Y PT+ + Y   ++V  +   L I DT
Sbjct: 2   PHMREYKLVVLGSGGVGKSALTVQFVQGIFVEKYDPTIEDSYRKQVEVDAQQCMLEILDT 61

Query: 73  AGQDDYDRLRPLFYPDASVLLLCFDVTSPNSFDNIFN-RWYPEVNHFCKKVPIIVVGCKT 131
           AG + +  +R L+  +     L + +T+ ++F+++ + R           VP+I+VG K 
Sbjct: 62  AGTEQFTAMRDLYMKNGQGFALVYSITAQSTFNDLQDLREQILRVKDTDDVPMILVGNKC 121

Query: 132 DLCKDKSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNVHAVFQEAAEVA 190
           DL  ++             V   +GQ +AR     A+LE SA+   NV+ +F +     
Sbjct: 122 DLEDER------------VVGKEQGQNLARQWNNCAFLESSAKSKINVNEIFYDLVRQI 168


>2WWX-A nrPDB
          Length = 175

 Score =  206 bits (524), Expect = 6e-54,   Method: Composition-based stats.
 Identities = 58/181 (32%), Positives = 93/181 (51%), Gaps = 16/181 (8%)

Query: 18  VKVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMV-NLQVKGKPVHLHIWDTAGQD 76
            K++L+GD G GK+ LL+ FAD  + ESY  T+   + +  +++ GK + L IWDTAGQ+
Sbjct: 9   FKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQE 68

Query: 77  DYDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVNHFC-KKVPIIVVGCKTDLCK 135
            +  +   +Y  A  +++ +DVT   SF+N+  +W  E++ +  + V  ++VG K DL  
Sbjct: 69  RFRTITSSYYRGAHGIIVVYDVTDQESFNNV-KQWLQEIDRYASENVNKLLVGIKCDLTT 127

Query: 136 DKSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNVHAVFQEAAEVALSSRG 195
            K             V Y   +E A S+G + +LE SA+   NV   F   A       G
Sbjct: 128 KK------------VVDYTTAKEFADSLG-IPFLETSAKNATNVEQSFMTMAAEIKKRMG 174

Query: 196 R 196
            
Sbjct: 175 P 175


>4QXA-A nrPDB
          Length = 208

 Score =  205 bits (523), Expect = 8e-54,   Method: Composition-based stats.
 Identities = 56/186 (30%), Positives = 87/186 (46%), Gaps = 20/186 (10%)

Query: 18  VKVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYM-VNLQVKGKPVHLHIWDTAGQD 76
            K++L+GDGG GK+SL+  +    F      T+   ++  +L+V G  V + IWDTAG +
Sbjct: 9   FKIILLGDGGVGKSSLMNRYVTNKFDSQLFHTIGVEFLNKDLEVDGHFVTMQIWDTAGLE 68

Query: 77  DYDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVNHFC-----KKVPIIVVGCKT 131
            +  LR  FY  +   LL F V    SF N+ N W  E  ++      +  P +++G KT
Sbjct: 69  RFRSLRTPFYRGSDCCLLTFSVDDSQSFQNLSN-WKKEFIYYADVKEPESFPFVILGNKT 127

Query: 132 DLCKDKSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNVHAVFQEAAEVAL 191
           D+ +               V+    Q   +  G   Y E SA+   NV A F+EA    L
Sbjct: 128 DIKE-------------RQVSTEEAQAWCKDNGDYPYFETSAKDSTNVAAAFEEAVRRIL 174

Query: 192 SSRGRN 197
           ++  R+
Sbjct: 175 ATEDRS 180


>5SZJ-A nrPDB
          Length = 202

 Score =  205 bits (523), Expect = 8e-54,   Method: Composition-based stats.
 Identities = 52/178 (29%), Positives = 94/178 (52%), Gaps = 16/178 (8%)

Query: 18  VKVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYM-VNLQVKGKPVHLHIWDTAGQD 76
            K++L+GD G GKT +L  F+D AF  ++  T+   +    ++++GK + L IWDTAGQ+
Sbjct: 12  FKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQIWDTAGQE 71

Query: 77  DYDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVN-HFCKKVPIIVVGCKTDLCK 135
            +  +   +Y  A  ++L +D+T+  SF+NI  +W   ++ H  + V  +++G K D+  
Sbjct: 72  RFHTITTSYYRGAMGIMLVYDITNGKSFENIS-KWLRNIDEHANEDVERMLLGNKCDMDD 130

Query: 136 DKSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNVHAVFQEAAEVALSS 193
            +             V   +G+++AR  G + + E SA+ + N+   F   AE  L  
Sbjct: 131 KR------------VVPKGKGEQIAREHG-IRFFETSAKANINIEKAFLTLAEDILRK 175


>3CPH-A nrPDB
          Length = 213

 Score =  205 bits (523), Expect = 1e-53,   Method: Composition-based stats.
 Identities = 52/189 (27%), Positives = 94/189 (49%), Gaps = 15/189 (7%)

Query: 18  VKVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYM-VNLQVKGKPVHLHIWDTAGQD 76
           +K++L+GD G GK+ LL+ F +  F  S+  T+   +    + + GK V L +WDTAGQ+
Sbjct: 21  MKILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGKKVKLQLWDTAGQE 80

Query: 77  DYDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVNHFCKKVPIIVVGCKTDLCKD 136
            +  +   +Y  A  ++L +DVT   +F NI   +     H   +  +++VG K+D+   
Sbjct: 81  RFRTITTAYYRGAMGIILVYDVTDERTFTNIKQWFKTVNEHANDEAQLLLVGNKSDME-- 138

Query: 137 KSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNVHAVFQEAAEVALSSRGR 196
                         VT  +G+ +A+ +G + ++E SA+  DNV+ +F   A++       
Sbjct: 139 -----------TRVVTADQGEALAKELG-IPFIESSAKNDDNVNEIFFTLAKLIQEKIDS 186

Query: 197 NFWRRITQG 205
           N    +  G
Sbjct: 187 NKLVGVGNG 195


>1WMS-A nrPDB
          Length = 177

 Score =  205 bits (522), Expect = 1e-53,   Method: Composition-based stats.
 Identities = 57/184 (30%), Positives = 85/184 (46%), Gaps = 20/184 (10%)

Query: 18  VKVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYM-VNLQVKGKPVHLHIWDTAGQD 76
            KV+L+GDGG GK+SL+  +    F      T+   ++  +L+V G  V + IWDTAGQ+
Sbjct: 8   FKVILLGDGGVGKSSLMNRYVTNKFDTQLFHTIGVEFLNKDLEVDGHFVTMQIWDTAGQE 67

Query: 77  DYDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVNHFC-----KKVPIIVVGCKT 131
            +  LR  FY  +   LL F V    SF N+ N W  E  ++      +  P +++G K 
Sbjct: 68  RFRSLRTPFYRGSDCCLLTFSVDDSQSFQNLSN-WKKEFIYYADVKEPESFPFVILGNKI 126

Query: 132 DLCKDKSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNVHAVFQEAAEVAL 191
           D+ +               V+    Q   R  G   Y E SA+   NV A F+EA    L
Sbjct: 127 DISE-------------RQVSTEEAQAWCRDNGDYPYFETSAKDATNVAAAFEEAVRRVL 173

Query: 192 SSRG 195
           ++  
Sbjct: 174 ATED 177


>5LPN-A nrPDB
          Length = 177

 Score =  205 bits (522), Expect = 1e-53,   Method: Composition-based stats.
 Identities = 52/178 (29%), Positives = 94/178 (52%), Gaps = 16/178 (8%)

Query: 18  VKVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYM-VNLQVKGKPVHLHIWDTAGQD 76
            K++L+GD G GKT +L  F+D AF  ++  T+   +    ++++GK + L IWDTAGQ+
Sbjct: 12  FKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQIWDTAGQE 71

Query: 77  DYDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVN-HFCKKVPIIVVGCKTDLCK 135
            +  +   +Y  A  ++L +D+T+  SF+NI  +W   ++ H  + V  +++G K D+  
Sbjct: 72  RFHTITTSYYRGAMGIMLVYDITNGKSFENIS-KWLRNIDEHANEDVERMLLGNKCDMDD 130

Query: 136 DKSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNVHAVFQEAAEVALSS 193
            +             V   +G+++AR  G + + E SA+ + N+   F   AE  L  
Sbjct: 131 KR------------VVPKGKGEQIAREHG-IRFFETSAKANINIEKAFLTLAEDILRK 175


>2OCY-C nrPDB
          Length = 170

 Score =  204 bits (519), Expect = 3e-53,   Method: Composition-based stats.
 Identities = 51/181 (28%), Positives = 92/181 (50%), Gaps = 15/181 (8%)

Query: 18  VKVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYM-VNLQVKGKPVHLHIWDTAGQD 76
           +K++L+GD G GK+ LL+ F +  F  S+  T+   +    + + GK V L +WDTAGQ+
Sbjct: 4   MKILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGKKVKLQLWDTAGQE 63

Query: 77  DYDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVNHFCKKVPIIVVGCKTDLCKD 136
            +  +   +Y  A  ++L +DVT   +F NI   +     H   +  +++VG K+D+   
Sbjct: 64  RFRTITTAYYRGAMGIILVYDVTDERTFTNIKQWFKTVNEHANDEAQLLLVGNKSDME-- 121

Query: 137 KSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNVHAVFQEAAEVALSSRGR 196
                         VT  +G+ +A+ +G + ++E SA+  DNV+ +F   A++       
Sbjct: 122 -----------TRVVTADQGEALAKELG-IPFIESSAKNDDNVNEIFFTLAKLIQEKIDS 169

Query: 197 N 197
           N
Sbjct: 170 N 170


>4RKE-A nrPDB
          Length = 176

 Score =  203 bits (518), Expect = 3e-53,   Method: Composition-based stats.
 Identities = 49/184 (26%), Positives = 81/184 (44%), Gaps = 14/184 (7%)

Query: 8   GEEAPPGVRSVKVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMVN-LQVKGKPVH 66
           G          K +++GD G GK+ LL+ F D  F   +  T+   +    + + GK + 
Sbjct: 1   GAMGMSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIK 60

Query: 67  LHIWDTAGQDDYDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVNHFCKKVPIIV 126
           L IWDTAG + +  +   +Y  A+  LL +D+T   +F+++         H    + I++
Sbjct: 61  LQIWDTAGLEAFRSITRSYYRGAAGALLVYDITRRETFNHLTTWLEDARQHSNSNMVIML 120

Query: 127 VGCKTDLCKDKSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNVHAVFQEA 186
           +G K+DL   +             V    G+  AR  G V ++E SAR   NV   F   
Sbjct: 121 IGNKSDLDSRR------------EVKKEEGEAFAREHGLV-FMETSARTAANVEEAFINT 167

Query: 187 AEVA 190
           A+  
Sbjct: 168 AKEI 171


>6IF2-B nrPDB
          Length = 186

 Score =  203 bits (517), Expect = 4e-53,   Method: Composition-based stats.
 Identities = 56/185 (30%), Positives = 92/185 (49%), Gaps = 15/185 (8%)

Query: 18  VKVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMV-NLQVKGKPVHLHIWDTAGQD 76
            K++++GD G GK+SLL+ FAD  F  SY  T+   + +  +++ G+ V L IWDTAG +
Sbjct: 15  FKLLIIGDSGVGKSSLLLRFADNTFSGSYITTIGVDFKIRTVEINGEKVKLQIWDTAGLE 74

Query: 77  DYDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVNHFCKKVPIIVVGCKTDLCKD 136
            +  +   +Y     +++ +DVTS  SF N+  RW  E+N  C  V  I+VG K D    
Sbjct: 75  RFRTITSTYYRGTHGVIVVYDVTSAESFVNV-KRWLHEINQNCDDVCRILVGNKND---- 129

Query: 137 KSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNVHAVFQEAAEVALSSRGR 196
                       + V      + A  +G +   E SA+ + NV  +F    E+ L ++  
Sbjct: 130 --------DPERKVVETEDAYKFAGQMG-IQLFETSAKENVNVEEMFNCITELVLRAKKD 180

Query: 197 NFWRR 201
           N  ++
Sbjct: 181 NLAKQ 185


>1X3S-A nrPDB
          Length = 195

 Score =  202 bits (514), Expect = 1e-52,   Method: Composition-based stats.
 Identities = 56/205 (27%), Positives = 92/205 (44%), Gaps = 25/205 (12%)

Query: 8   GEEAPPGVRS-----VKVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYM-VNLQVK 61
           G     G+       +K++++G+ G GK+SLL+ F D  F      T+   +    + V 
Sbjct: 1   GSSGSSGMDEDVLTTLKILIIGESGVGKSSLLLRFTDDTFDPELAATIGVDFKVKTISVD 60

Query: 62  GKPVHLHIWDTAGQDDYDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVNHFC-- 119
           G    L IWDTAGQ+ +  L P +Y  A  ++L +DVT  ++F  + N W  E+  +C  
Sbjct: 61  GNKAKLAIWDTAGQERFRTLTPSYYRGAQGVILVYDVTRRDTFVKLDN-WLNELETYCTR 119

Query: 120 KKVPIIVVGCKTDLCKDKSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNV 179
             +  ++VG K D                  V  + G + AR   ++ ++E SA+  D V
Sbjct: 120 NDIVNMLVGNKIDKEN-------------REVDRNEGLKFARKH-SMLFIEASAKTCDGV 165

Query: 180 HAVFQEAAEVALSSRGRNFWRRITQ 204
              F+E  E  + + G   W    Q
Sbjct: 166 QCAFEELVEKIIQTPG--LWESENQ 188


>5FBL-B nrPDB
          Length = 221

 Score =  202 bits (513), Expect = 1e-52,   Method: Composition-based stats.
 Identities = 56/190 (29%), Positives = 82/190 (43%), Gaps = 19/190 (10%)

Query: 6   AAGEEAPPGVRS---VKVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMVN-LQVK 61
           A G             KVVL+GD G GK++LL  F    F      T+   +    +QV 
Sbjct: 2   AMGSMGTRDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVD 61

Query: 62  GKPVHLHIWDTAGQDDYDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVN-HFCK 120
           GK +   IWDTAGQ+ Y  +   +Y  A   LL +D+    +++N+  RW  E+  H   
Sbjct: 62  GKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENV-ERWLKELRDHADS 120

Query: 121 KVPIIVVGCKTDLCKDKSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNVH 180
            + I++VG K+DL              L  V     +  A   G ++++E SA    NV 
Sbjct: 121 NIVIMLVGNKSDLRH------------LRAVPTDEARAFAEKNG-LSFIETSALDSTNVE 167

Query: 181 AVFQEAAEVA 190
           A FQ      
Sbjct: 168 AAFQTILTEI 177


>2OCB-A nrPDB
          Length = 180

 Score =  201 bits (512), Expect = 2e-52,   Method: Composition-based stats.
 Identities = 60/185 (32%), Positives = 85/185 (45%), Gaps = 20/185 (10%)

Query: 18  VKVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYM-VNLQVKGKPVHLHIWDTAGQD 76
           +KV+L+GDGG GK+SL+  +    F      T+   ++  +L+V G+ V L IWDTAGQ+
Sbjct: 8   LKVILLGDGGVGKSSLMNRYVTNKFDSQAFHTIGVEFLNRDLEVDGRFVTLQIWDTAGQE 67

Query: 77  DYDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVNHFC-----KKVPIIVVGCKT 131
            +  LR  FY  A   LL F V    SF+N+ N W  E  ++      +  P +V+G K 
Sbjct: 68  RFKSLRTPFYRGADCCLLTFSVDDRQSFENLGN-WQKEFIYYADVKDPEHFPFVVLGNKV 126

Query: 132 DLCKDKSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNVHAVFQEAAEVAL 191
           D                  VT    Q      G   YLE SA+   NV   F+EA    L
Sbjct: 127 DKED-------------RQVTTEEAQTWCMENGDYPYLETSAKDDTNVTVAFEEAVRQVL 173

Query: 192 SSRGR 196
           +   +
Sbjct: 174 AVEEQ 178


>1Z0F-A nrPDB
          Length = 179

 Score =  200 bits (510), Expect = 3e-52,   Method: Composition-based stats.
 Identities = 51/189 (26%), Positives = 88/189 (46%), Gaps = 16/189 (8%)

Query: 8   GEEAPPGVRSV--KVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMVNL-QVKGKP 64
           G    P   S   K +++GD G GK+ LL  F +  F      T+   +   + +V G+ 
Sbjct: 4   GSATAPYNYSYIFKYIIIGDMGVGKSCLLHQFTEKKFMADCPHTIGVEFGTRIIEVSGQK 63

Query: 65  VHLHIWDTAGQDDYDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVNHFCKKVPI 124
           + L IWDTAGQ+ +  +   +Y  A+  L+ +D+T  ++++++ +      N       I
Sbjct: 64  IKLQIWDTAGQERFRAVTRSYYRGAAGALMVYDITRRSTYNHLSSWLTDARNLTNPNTVI 123

Query: 125 IVVGCKTDLCKDKSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNVHAVFQ 184
           I++G K DL   +             VTY   ++ A   G + +LE SA+  +NV   F 
Sbjct: 124 ILIGNKADLEAQRD------------VTYEEAKQFAEENG-LLFLEASAKTGENVEDAFL 170

Query: 185 EAAEVALSS 193
           EAA+    +
Sbjct: 171 EAAKKIYQN 179


>1ZBD-A nrPDB
          Length = 203

 Score =  199 bits (507), Expect = 6e-52,   Method: Composition-based stats.
 Identities = 46/183 (25%), Positives = 85/183 (46%), Gaps = 16/183 (8%)

Query: 18  VKVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYM-VNLQVKGKPVHLHIWDTAGQD 76
            K++++G+   GKTS L  +AD +F  ++  TV   +    +    K + L IWDTAG +
Sbjct: 9   FKILIIGNSSVGKTSFLFRYADDSFTPAFVSTVGIDFKVKTIYRNDKRIKLQIWDTAGLE 68

Query: 77  DYDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVNHFC-KKVPIIVVGCKTDLCK 135
            Y  +   +Y  A   +L +D+T+  SF N    W  ++  +      +++VG K D+  
Sbjct: 69  RYRTITTAYYRGAMGFILMYDITNEESF-NAVQDWSTQIKTYSWDNAQVLLVGNKCDMED 127

Query: 136 DKSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNVHAVFQEAAEVALSSRG 195
           ++             V+  RG+++A  +G   + E SA+ + NV   F+   +V      
Sbjct: 128 ER------------VVSSERGRQLADHLG-FEFFEASAKDNINVKQTFERLVDVICEKMS 174

Query: 196 RNF 198
            + 
Sbjct: 175 ESL 177


>2GF9-A nrPDB
          Length = 189

 Score =  199 bits (506), Expect = 9e-52,   Method: Composition-based stats.
 Identities = 52/184 (28%), Positives = 87/184 (47%), Gaps = 17/184 (9%)

Query: 10  EAPPGVRSV-KVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMVNLQVK-GKPVHL 67
             P G   + K++L+G+   GKTS L  +AD +F  ++  TV   + V    +  K + L
Sbjct: 14  LVPRGSDYMFKLLLIGNSSVGKTSFLFRYADDSFTPAFVSTVGIDFKVKTVYRHDKRIKL 73

Query: 68  HIWDTAGQDDYDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVNHFC-KKVPIIV 126
            IWDTAGQ+ Y  +   +Y  A   LL +D+ +  SF  + + W  ++  +      +I+
Sbjct: 74  QIWDTAGQERYRTITTAYYRGAMGFLLMYDIANQESFAAVQD-WATQIKTYSWDNAQVIL 132

Query: 127 VGCKTDLCKDKSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNVHAVFQEA 186
           VG K DL  ++             V    G+ +A  +G   + E SA+ + NV  VF+  
Sbjct: 133 VGNKCDLEDER------------VVPAEDGRRLADDLG-FEFFEASAKENINVKQVFERL 179

Query: 187 AEVA 190
            +V 
Sbjct: 180 VDVI 183


>4DXA-A nrPDB
          Length = 169

 Score =  198 bits (503), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 50/177 (28%), Positives = 87/177 (49%), Gaps = 13/177 (7%)

Query: 15  VRSVKVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMVNLQVKGKPVHLHIWDTAG 74
           +R  K+V++G  G GK++L + F  G F E Y PT+ + Y   ++V  +   L I DTAG
Sbjct: 3   MREYKLVVLGSVGVGKSALTVQFVQGIFVEKYDPTIEDSYRKQVEVDAQQCMLEILDTAG 62

Query: 75  QDDYDRLRPLFYPDASVLLLCFDVTSPNSFDNIFN-RWYPEVNHFCKKVPIIVVGCKTDL 133
            + +  +R L+  +     L + +T+ ++F+++ + R           VP+I+VG K DL
Sbjct: 63  TEQFTAMRDLYMKNGQGFALVYSITAQSTFNDLQDLREQILRVKDTDDVPMILVGNKCDL 122

Query: 134 CKDKSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNVHAVFQEAAEVA 190
             ++             V   +GQ +AR     A+LE SA+   NV+ +F +     
Sbjct: 123 EDER------------VVGKEQGQNLARQWNNCAFLESSAKSKINVNEIFYDLVRQI 167


>4G01-B nrPDB
          Length = 181

 Score =  198 bits (503), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 58/185 (31%), Positives = 88/185 (47%), Gaps = 18/185 (9%)

Query: 8   GEEAPPGVRSV--KVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFE-RYMVNLQVKGKP 64
           G  A  G +S+  K+VL+GD G GK+SL++ F    F E    T+    +   L V    
Sbjct: 1   GSMAAAGNKSINAKLVLLGDVGAGKSSLVLRFVKDQFVEFQESTIGAAFFSQTLAVNDAT 60

Query: 65  VHLHIWDTAGQDDYDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVNHFC-KKVP 123
           V   IWDTAGQ+ Y  L P++Y  A+  ++ FDVT+  SF+    +W  E+       + 
Sbjct: 61  VKFEIWDTAGQERYHSLAPMYYRGAAAAIIVFDVTNQASFERA-KKWVQELQAQGNPNMV 119

Query: 124 IIVVGCKTDLCKDKSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNVHAVF 183
           + + G K+DL   +             VT    Q  A+  G + ++E SA+   NV  +F
Sbjct: 120 MALAGNKSDLLDARK------------VTAEDAQTYAQENG-LFFMETSAKTATNVKEIF 166

Query: 184 QEAAE 188
            E A 
Sbjct: 167 YEIAR 171


>4RKF-A nrPDB
          Length = 190

 Score =  197 bits (502), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 50/175 (28%), Positives = 92/175 (52%), Gaps = 16/175 (9%)

Query: 18  VKVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMVNLQVK-GKPVHLHIWDTAGQD 76
            K++++G+   GKTS L  +AD +F  ++  TV   + V    +  K V L IWDTAG +
Sbjct: 24  FKLLIIGNSSVGKTSFLFRYADDSFTSAFVSTVGIDFKVKTVFRHDKRVKLQIWDTAGLE 83

Query: 77  DYDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVNHFC-KKVPIIVVGCKTDLCK 135
            Y  +   +Y  A   +L +DVT+ +SF+++ + W  ++  +      +I+VG K D+  
Sbjct: 84  RYRTITTAYYRGAMGFILMYDVTNEDSFNSVQD-WVTQIKTYSWDNAQVILVGNKCDMED 142

Query: 136 DKSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNVHAVFQEAAEVA 190
            +             +++ RG+++A  +G V + E SA+ + NV AVF+   ++ 
Sbjct: 143 QR------------VISFERGRQLADQLG-VEFFETSAKENVNVKAVFERLVDII 184


>3RAB-A nrPDB
          Length = 169

 Score =  197 bits (501), Expect = 3e-51,   Method: Composition-based stats.
 Identities = 47/175 (26%), Positives = 85/175 (48%), Gaps = 16/175 (9%)

Query: 18  VKVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYM-VNLQVKGKPVHLHIWDTAGQD 76
            K++++G+   GKTS L  +AD +F  ++  TV   +    +    K + L IWDTAGQ+
Sbjct: 6   FKILIIGNSSVGKTSFLFRYADDSFTPAFVSTVGIDFKVKTIYRNDKRIKLQIWDTAGQE 65

Query: 77  DYDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVNHFC-KKVPIIVVGCKTDLCK 135
            Y  +   +Y  A   +L +D+T+  SF N    W  ++  +      +++VG K D+  
Sbjct: 66  RYRTITTAYYRGAMGFILMYDITNEESF-NAVQDWSTQIKTYSWDNAQVLLVGNKCDMED 124

Query: 136 DKSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNVHAVFQEAAEVA 190
           ++             V+  RG+++A  +G   + E SA+ + NV   F+   +V 
Sbjct: 125 ER------------VVSSERGRQLADHLG-FEFFEASAKDNINVKQTFERLVDVI 166


>2F9L-A nrPDB
          Length = 199

 Score =  197 bits (500), Expect = 4e-51,   Method: Composition-based stats.
 Identities = 52/175 (29%), Positives = 79/175 (45%), Gaps = 16/175 (9%)

Query: 18  VKVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMVN-LQVKGKPVHLHIWDTAGQD 76
            KVVL+GD G GK++LL  F    F      T+   +    +QV GK +   IWDTAGQ+
Sbjct: 6   FKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQE 65

Query: 77  DYDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVN-HFCKKVPIIVVGCKTDLCK 135
            Y R+   +Y  A   LL +D+    +++N+  RW  E+  H    + I++VG K+DL  
Sbjct: 66  RYRRITSAYYRGAVGALLVYDIAKHLTYENV-ERWLKELRDHADSNIVIMLVGNKSDLRH 124

Query: 136 DKSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNVHAVFQEAAEVA 190
                       L  V     +  A     ++++E SA    NV   F+      
Sbjct: 125 ------------LRAVPTDEARAFAEKNN-LSFIETSALDSTNVEEAFKNILTEI 166


>2HEI-A nrPDB
          Length = 179

 Score =  196 bits (498), Expect = 7e-51,   Method: Composition-based stats.
 Identities = 49/184 (26%), Positives = 82/184 (44%), Gaps = 16/184 (8%)

Query: 17  SVKVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMVN-LQVKGKPVHLHIWDTAGQ 75
             K+VL+G+   GK+SL++ F  G F E    T+   ++   + +    V   IWDTAGQ
Sbjct: 8   QFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQSVCLDDTTVKFEIWDTAGQ 67

Query: 76  DDYDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVNHFC-KKVPIIVVGCKTDLC 134
           + Y  L P++Y  A   ++ +D+T+  +F      W  E+       + I + G K DL 
Sbjct: 68  ERYHSLAPMYYRGAQAAIVVYDITNQETFARA-KTWVKELQRQASPSIVIALAGNKADLA 126

Query: 135 KDKSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNVHAVFQEAAEVALSSR 194
             +             V Y   Q  A    ++ ++E SA+   NV+ +F   A+    S 
Sbjct: 127 NKR------------MVEYEEAQAYADD-NSLLFMETSAKTAMNVNDLFLAIAKKLPKSE 173

Query: 195 GRNF 198
            +N 
Sbjct: 174 PQNL 177


>4KLZ-A nrPDB
          Length = 173

 Score =  195 bits (496), Expect = 1e-50,   Method: Composition-based stats.
 Identities = 46/183 (25%), Positives = 80/183 (43%), Gaps = 14/183 (7%)

Query: 15  VRSVKVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMVNLQVKGKPVHLHIWDTAG 74
            R  K+V++G GG GK+++ M F    FPE + PT+ + Y + +++  +P +L I DTAG
Sbjct: 3   SREYKLVMLGAGGVGKSAMTMQFISHRFPEDHDPTIEDAYKIRIRIDDEPANLDILDTAG 62

Query: 75  QDDYDRLRPLFYPDASVLLLCFDVTSPNSFDNIFN-RWYPEVNHFCKKVPIIVVGCKTDL 133
           Q ++  +R  +       ++C+ +T   SF  +   +            P+++VG K+DL
Sbjct: 63  QAEFTAMRDQYMRAGEGFIICYSITDRRSFHEVREFKQLIYRVRRTDDTPVVLVGNKSDL 122

Query: 134 CKDKSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNVHAVFQEAAEVALSS 193
            +            L  VT   G  +AR   +  + E SA     +  VF          
Sbjct: 123 KQ------------LRQVTKEEGLALAREF-SCPFFETSAAYRYYIDDVFHALVREIRRK 169

Query: 194 RGR 196
              
Sbjct: 170 EKE 172


>2O52-A nrPDB
          Length = 200

 Score =  195 bits (495), Expect = 1e-50,   Method: Composition-based stats.
 Identities = 46/177 (25%), Positives = 79/177 (44%), Gaps = 14/177 (7%)

Query: 18  VKVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMVNLQ-VKGKPVHLHIWDTAGQD 76
            K +++G  G GK+ LL  F +  F +    T+   +   +  V GK V L IWDTAGQ+
Sbjct: 26  FKFLVIGSAGTGKSCLLHQFIENKFKQDSNHTIGVEFGSRVVNVGGKTVKLQIWDTAGQE 85

Query: 77  DYDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVNHFCKKVPIIVVGCKTDLCKD 136
            +  +   +Y  A+  LL +D+TS  +++++              + +I+ G K DL  +
Sbjct: 86  RFRSVTRSYYRGAAGALLVYDITSRETYNSLAAWLTDARTLASPNIVVILCGNKKDLDPE 145

Query: 137 KSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNVHAVFQEAAEVALSS 193
           +             VT+      A+    + +LE SA   +NV   F + A   L+ 
Sbjct: 146 R------------EVTFLEASRFAQE-NELMFLETSALTGENVEEAFLKCARTILNK 189


>5LDD-C nrPDB
          Length = 207

 Score =  195 bits (495), Expect = 1e-50,   Method: Composition-based stats.
 Identities = 57/196 (29%), Positives = 88/196 (44%), Gaps = 18/196 (9%)

Query: 8   GEEAPPGVRSVKVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMVN-LQVKGKPVH 66
           G  +      +KV+++GD G GKTSL+  + +  F  SY  T+   ++   + V  + V 
Sbjct: 1   GSMSSRKKVLLKVIILGDSGVGKTSLMNQYVNKKFSASYKATIGADFLTREVMVDDRQVT 60

Query: 67  LHIWDTAGQDDYDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEV-----NHFCKK 121
           + +WDTAGQ+ +  L   FY  A   +L FDV +  SFD + + W  E          + 
Sbjct: 61  MQLWDTAGQERFQSLGVAFYRGADCCVLVFDVNNAKSFDAL-DSWRDEFLIQASPRDPEN 119

Query: 122 VPIIVVGCKTDLCKDKSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNVHA 181
            P +V+G K D+ + K             ++  R Q   +S G + Y E SA+   NV  
Sbjct: 120 FPFVVLGIKIDVEESK-----------RVISTKRAQTFCQSKGGIPYFETSAKEAINVEE 168

Query: 182 VFQEAAEVALSSRGRN 197
            FQ  A  AL      
Sbjct: 169 AFQVIARNALMQEESE 184


>1TU4-A nrPDB
          Length = 171

 Score =  194 bits (494), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 48/176 (27%), Positives = 80/176 (45%), Gaps = 16/176 (9%)

Query: 17  SVKVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMV-NLQVKGKPVHLHIWDTAGQ 75
             K+VL+G+   GK+SL++ F  G F E    T+   ++   + +    V   IWDTAGQ
Sbjct: 7   QFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQ 66

Query: 76  DDYDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVNHFC-KKVPIIVVGCKTDLC 134
           + Y  L P++Y  A   ++ +D+T+  SF    N W  E+       + I + G K DL 
Sbjct: 67  ERYHSLAPMYYRGAQAAIVVYDITNEESFARAKN-WVKELQRQASPNIVIALSGNKADLA 125

Query: 135 KDKSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNVHAVFQEAAEVA 190
             +             V +   Q  A    ++ ++E SA+   NV+ +F   A+  
Sbjct: 126 NKR------------AVDFQEAQSYADD-NSLLFMETSAKTSMNVNEIFMAIAKKL 168


>4UJ4-A nrPDB
          Length = 185

 Score =  194 bits (494), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 53/175 (30%), Positives = 79/175 (45%), Gaps = 16/175 (9%)

Query: 18  VKVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMVN-LQVKGKPVHLHIWDTAGQD 76
            KVVL+GD G GK++LL  F    F      T+   +    +QV GK +   IWDTAG +
Sbjct: 11  FKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGLE 70

Query: 77  DYDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVN-HFCKKVPIIVVGCKTDLCK 135
            Y  +   +Y  A   LL +D+    +++N+  RW  E+  H    + I++VG K+DL  
Sbjct: 71  RYRAITSAYYRGAVGALLVYDIAKHLTYENV-ERWLKELRDHADSNIVIMLVGNKSDLRH 129

Query: 136 DKSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNVHAVFQEAAEVA 190
                       L  V     +  A   G ++++E SA    NV A FQ      
Sbjct: 130 ------------LRAVPTDEARAFAEKNG-LSFIETSALDSTNVEAAFQTILTEI 171


>3DZ8-A nrPDB
          Length = 191

 Score =  194 bits (493), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 48/182 (26%), Positives = 84/182 (46%), Gaps = 16/182 (8%)

Query: 18  VKVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMVNLQVKG-KPVHLHIWDTAGQD 76
            K++++G+   GKTS L  +AD  F  ++  TV   + V    +  K V L IWDTAGQ+
Sbjct: 24  FKLLIIGNSSVGKTSFLFRYADDTFTPAFVSTVGIDFKVKTVYRHEKRVKLQIWDTAGQE 83

Query: 77  DYDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVNHFC-KKVPIIVVGCKTDLCK 135
            Y  +   +Y  A   +L +D+T+  SF N    W  ++  +      +I+VG K D+ +
Sbjct: 84  RYRTITTAYYRGAMGFILMYDITNEESF-NAVQDWATQIKTYSWDNAQVILVGNKCDMEE 142

Query: 136 DKSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNVHAVFQEAAEVALSSRG 195
           ++             V   +GQ +A  +G   + E SA+ + +V   F+   +       
Sbjct: 143 ER------------VVPTEKGQLLAEQLG-FDFFEASAKENISVRQAFERLVDAICDKMS 189

Query: 196 RN 197
            +
Sbjct: 190 DS 191


>2HUP-A nrPDB
          Length = 201

 Score =  194 bits (493), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 54/194 (27%), Positives = 91/194 (46%), Gaps = 15/194 (7%)

Query: 4   AQAAGEEAPPGVRSVKVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERY-MVNLQVKG 62
            + +G+         K+VLVGD   GKT ++  F  GAF E    T+   + M  L+++G
Sbjct: 16  PRGSGDPDEQYDFLFKLVLVGDASVGKTCVVQRFKTGAFSERQGSTIGVDFTMKTLEIQG 75

Query: 63  KPVHLHIWDTAGQDDYDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVNHFC-KK 121
           K V L IWDTAGQ+ +  +   +Y  A+  +L +D+T  +SF ++ + W  +V  +    
Sbjct: 76  KRVKLQIWDTAGQERFRTITQSYYRSANGAILAYDITKRSSFLSVPH-WIEDVRKYAGSN 134

Query: 122 VPIIVVGCKTDLCKDKSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNVHA 181
           +  +++G K+DL +            L  V+    Q +A     +  +E SA+   NV  
Sbjct: 135 IVQLLIGNKSDLSE------------LREVSLAEAQSLAEHYDILCAIETSAKDSSNVEE 182

Query: 182 VFQEAAEVALSSRG 195
            F   A   +   G
Sbjct: 183 AFLRVATELIMRHG 196


>2F7S-A nrPDB
          Length = 217

 Score =  193 bits (492), Expect = 3e-50,   Method: Composition-based stats.
 Identities = 53/192 (27%), Positives = 84/192 (43%), Gaps = 27/192 (14%)

Query: 18  VKVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMVNLQVKGKP-----------VH 66
           +K++ +GD G GKT+ L  + D  F   +  TV   +     V               VH
Sbjct: 26  IKLLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYNAQGPNGSSGKAFKVH 85

Query: 67  LHIWDTAGQDDYDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVN--HFCKKVPI 124
           L +WDTAGQ+ +  L   F+ DA   LL FD+TS  SF N+ N W  ++    +C+   I
Sbjct: 86  LQLWDTAGQERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVRN-WMSQLQANAYCENPDI 144

Query: 125 IVVGCKTDLCKDKSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNVHAVFQ 184
           +++G K DL   +             V   + +E+A   G + Y E SA    NV    +
Sbjct: 145 VLIGNKADLPDQR------------EVNERQARELADKYG-IPYFETSAATGQNVEKAVE 191

Query: 185 EAAEVALSSRGR 196
              ++ +    +
Sbjct: 192 TLLDLIMKRMEQ 203


>3REG-A nrPDB
          Length = 194

 Score =  193 bits (492), Expect = 3e-50,   Method: Composition-based stats.
 Identities = 74/181 (40%), Positives = 112/181 (61%), Gaps = 10/181 (5%)

Query: 14  GVRSVKVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMVNLQVKGKPVHLHIWDTA 73
           G +++K+V+VGDG  GKT LL+ F+ G  P +Y PTVFE +   ++ K +   LH+WDTA
Sbjct: 20  GKKALKIVVVGDGAVGKTCLLLAFSKGEIPTAYVPTVFENFSHVMKYKNEEFILHLWDTA 79

Query: 74  GQDDYDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVNHFCKKVPIIVVGCKTDL 133
           GQ++YDRLRPL Y D+ V+LLCF V +  SFDNI  +W PE+ H+      ++VG K DL
Sbjct: 80  GQEEYDRLRPLSYADSDVVLLCFAVNNRTSFDNISTKWEPEIKHYIDTAKTVLVGLKVDL 139

Query: 134 CKDKSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNVHAVFQEAAEVALSS 193
            KD          G + VT   G ++ + +G VAY+E S+     ++ VF+++ +   S+
Sbjct: 140 RKD----------GSDDVTKQEGDDLCQKLGCVAYIEASSVAKIGLNEVFEKSVDCIFSN 189

Query: 194 R 194
           +
Sbjct: 190 K 190


>2G6B-A nrPDB
          Length = 180

 Score =  193 bits (492), Expect = 4e-50,   Method: Composition-based stats.
 Identities = 61/183 (33%), Positives = 94/183 (51%), Gaps = 17/183 (9%)

Query: 17  SVKVVLVGDGGCGKTSLLMVFADGAF-PESYTPTVFERYM-VNLQVKGKPVHLHIWDTAG 74
           + KV+LVGD G GKT LL+ F DGAF   ++  TV   +    L V G  V L +WDTAG
Sbjct: 10  AFKVMLVGDSGVGKTCLLVRFKDGAFLAGTFISTVGIDFRNKVLDVDGVKVKLQMWDTAG 69

Query: 75  QDDYDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVNHFCK-KVPIIVVGCKTDL 133
           Q+ +  +   +Y DA  LLL +DVT+  SFDNI   W  E++ + +  V ++++G K D 
Sbjct: 70  QERFRSVTHAYYRDAHALLLLYDVTNKASFDNI-QAWLTEIHEYAQHDVALMLLGNKVDS 128

Query: 134 CKDKSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNVHAVFQEAAEVALSS 193
             ++             V    G+++A+  G + ++E SA+   NV   F   A+     
Sbjct: 129 AHER------------VVKREDGEKLAKEYG-LPFMETSAKTGLNVDLAFTAIAKELKRR 175

Query: 194 RGR 196
             +
Sbjct: 176 SMK 178


>3CPJ-B nrPDB
          Length = 223

 Score =  193 bits (491), Expect = 5e-50,   Method: Composition-based stats.
 Identities = 48/181 (26%), Positives = 80/181 (44%), Gaps = 16/181 (8%)

Query: 18  VKVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERY-MVNLQVKGKPVHLHIWDTAGQD 76
            K+VL+GD G GK++LL  F    F      T+   +    L+++GK +   IWDTAGQ+
Sbjct: 14  FKIVLIGDSGVGKSNLLSRFTKNEFNMDSKSTIGVEFATRTLEIEGKRIKAQIWDTAGQE 73

Query: 77  DYDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVNHFC-KKVPIIVVGCKTDLCK 135
            Y  +   +Y  A   L+ +D++  +S++N  N W  E+       V + ++G K+DL  
Sbjct: 74  RYRAITSAYYRGAVGALIVYDISKSSSYENC-NHWLSELRENADDNVAVGLIGNKSDLAH 132

Query: 136 DKSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNVHAVFQEAAEVALSSRG 195
                       L  V     +  A+    + + E SA   +NV   F+E          
Sbjct: 133 ------------LRAVPTEESKTFAQE-NQLLFTETSALNSENVDKAFEELINTIYQKVS 179

Query: 196 R 196
           +
Sbjct: 180 K 180


>2FG5-A nrPDB
          Length = 192

 Score =  193 bits (490), Expect = 5e-50,   Method: Composition-based stats.
 Identities = 52/185 (28%), Positives = 89/185 (48%), Gaps = 18/185 (9%)

Query: 10  EAPPGV--RSVKVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMVNLQVKGKPVH- 66
             P G   R +KV L+GD G GK+S++  F    F  + +PT+   +M      G  +H 
Sbjct: 14  LVPRGSAIRELKVCLLGDTGVGKSSIVCRFVQDHFDHNISPTIGASFMTKTVPCGNELHK 73

Query: 67  LHIWDTAGQDDYDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVN-HFCKKVPII 125
             IWDTAGQ+ +  L P++Y  ++  ++ +D+T  +SF  +  +W  E+  H  + + + 
Sbjct: 74  FLIWDTAGQERFHSLAPMYYRGSAAAVIVYDITKQDSFYTL-KKWVKELKEHGPENIVMA 132

Query: 126 VVGCKTDLCKDKSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNVHAVFQE 185
           + G K DL              +  V     +E A S+GA+  +E SA+   N+  +FQ 
Sbjct: 133 IAGNKCDLSD------------IREVPLKDAKEYAESIGAIV-VETSAKNAINIEELFQG 179

Query: 186 AAEVA 190
            +   
Sbjct: 180 ISRQI 184


>2EW1-A nrPDB
          Length = 201

 Score =  193 bits (490), Expect = 6e-50,   Method: Composition-based stats.
 Identities = 57/202 (28%), Positives = 92/202 (45%), Gaps = 22/202 (10%)

Query: 10  EAPPGVRS-----VKVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYM-VNLQVKGK 63
             P G         K+VL+G+ G GKT L+  F  G FP     T+   +M   +++ G+
Sbjct: 14  LVPRGSMEDYDFLFKIVLIGNAGVGKTCLVRRFTQGLFPPGQGATIGVDFMIKTVEINGE 73

Query: 64  PVHLHIWDTAGQDDYDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVNHFCKKVP 123
            V L IWDTAGQ+ +  +   +Y  A+ L+L +D+T   SF      W  E+  +     
Sbjct: 74  KVKLQIWDTAGQERFRSITQSYYRSANALILTYDITCEESF-RCLPEWLREIEQYASNKV 132

Query: 124 I-IVVGCKTDLCKDKSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNVHAV 182
           I ++VG K DL + +             V+  R +E +     + YLE SA+  DNV  +
Sbjct: 133 ITVLVGNKIDLAERR------------EVSQQRAEEFS-EAQDMYYLETSAKESDNVEKL 179

Query: 183 FQEAA-EVALSSRGRNFWRRIT 203
           F + A  +   +R       ++
Sbjct: 180 FLDLACRLISEARQNTLVNNVS 201


>1EK0-A nrPDB
          Length = 170

 Score =  192 bits (489), Expect = 8e-50,   Method: Composition-based stats.
 Identities = 53/178 (29%), Positives = 90/178 (50%), Gaps = 13/178 (7%)

Query: 15  VRSVKVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMVN-LQVKGKPVHLHIWDTA 73
           V S+K+VL+G+   GK+S+++ F    F E+  PT+   ++   + +    V   IWDTA
Sbjct: 1   VTSIKLVLLGEAAVGKSSIVLRFVSNDFAENKEPTIGAAFLTQRVTINEHTVKFEIWDTA 60

Query: 74  GQDDYDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVNHFCK-KVPIIVVGCKTD 132
           GQ+ +  L P++Y +A   L+ +DVT P SF    + W  E++      + I +VG K D
Sbjct: 61  GQERFASLAPMYYRNAQAALVVYDVTKPQSFIKARH-WVKELHEQASKDIIIALVGNKID 119

Query: 133 LCKDKSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNVHAVFQEAAEVA 190
           + ++          G   V    G+++A   G + + E SA+  +NV+ VF    E  
Sbjct: 120 MLQE---------GGERKVAREEGEKLAEEKG-LLFFETSAKTGENVNDVFLGIGEKI 167


>2BMD-A nrPDB
          Length = 186

 Score =  192 bits (488), Expect = 9e-50,   Method: Composition-based stats.
 Identities = 50/178 (28%), Positives = 80/178 (44%), Gaps = 16/178 (8%)

Query: 18  VKVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERY-MVNLQVKGKPVHLHIWDTAGQD 76
            K +++G+ G GK+ LL  F +  F +    T+   +    + V GK V L IWDTAGQ+
Sbjct: 11  FKFLVIGNAGTGKSCLLHQFIEKKFKDDSNHTIGVEFGSKIINVGGKYVKLQIWDTAGQE 70

Query: 77  DYDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVNHFCK-KVPIIVVGCKTDLCK 135
            +  +   +Y  A+  LL +D+TS  ++ N    W  +        + II+ G K DL  
Sbjct: 71  RFRSVTRSYYRGAAGALLVYDITSRETY-NALTNWLTDARMLASQNIVIILCGNKKDLDA 129

Query: 136 DKSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNVHAVFQEAAEVALSS 193
           D+             VT+      A+    + +LE SA   +NV   F + A   L+ 
Sbjct: 130 DR------------EVTFLEASRFAQE-NELMFLETSALTGENVEEAFVQCARKILNK 174


>2IL1-A nrPDB
          Length = 192

 Score =  192 bits (487), Expect = 1e-49,   Method: Composition-based stats.
 Identities = 48/187 (25%), Positives = 95/187 (50%), Gaps = 15/187 (8%)

Query: 10  EAPPGVRSVKVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYM-VNLQVKGKPVHLH 68
              P    ++V+++G  G GKTSL+  F D  F E+   TV   +    ++++GK + L 
Sbjct: 19  SPRPADFKLQVIIIGSRGVGKTSLMERFTDDTFCEACKSTVGVDFKIKTVELRGKKIRLQ 78

Query: 69  IWDTAGQDDYDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVNHFC-KKVPIIVV 127
           IWDTAGQ+ ++ +   +Y  A  ++L +D+T   +FD++  +W   ++ +  +   +++V
Sbjct: 79  IWDTAGQERFNSITSAYYRSAKGIILVYDITKKETFDDLP-KWMKMIDKYASEDAELLLV 137

Query: 128 GCKTDLCKDKSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNVHAVFQEAA 187
           G K D   D+             +T  +G++ A+ +  + + E SA+ + NV  +F +  
Sbjct: 138 GNKLDCETDR------------EITRQQGEKFAQQITGMRFCEASAKDNFNVDEIFLKLV 185

Query: 188 EVALSSR 194
           +  L   
Sbjct: 186 DDILKKM 192


>5XR6-A nrPDB
          Length = 194

 Score =  192 bits (487), Expect = 1e-49,   Method: Composition-based stats.
 Identities = 52/175 (29%), Positives = 77/175 (44%), Gaps = 16/175 (9%)

Query: 18  VKVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERY-MVNLQVKGKPVHLHIWDTAGQD 76
            K+VL+GD G GK++LL  F    F      T+   +     +V+GK V   IWDTAGQ+
Sbjct: 26  FKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATKTTKVEGKVVKAQIWDTAGQE 85

Query: 77  DYDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVN-HFCKKVPIIVVGCKTDLCK 135
            Y  +   +Y  A   LL +DVT   +F+N   RW  E+  H    + ++++G K DL  
Sbjct: 86  RYRAITSAYYRGAVGALLIYDVTRHATFENAA-RWLRELRGHTDPNIVVMLIGNKCDLRH 144

Query: 136 DKSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNVHAVFQEAAEVA 190
                       L  V     +  A    ++ ++E SA    NV   F E     
Sbjct: 145 ------------LVAVKTEEAKAFAERE-SLYFMETSALDATNVENAFTEVLTQI 186


>2REX-B nrPDB
          Length = 197

 Score =  191 bits (485), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 73/190 (38%), Positives = 114/190 (60%), Gaps = 1/190 (0%)

Query: 8   GEEAPPGVRSVKVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMVNLQVKGKPVHL 67
           G    P V   K+VLVGD  CGKT++L V A   +PE+Y PTVFE Y   L+ + + V L
Sbjct: 1   GRAPQPVVARCKLVLVGDVQCGKTAMLQVLAKDCYPETYVPTVFENYTACLETEEQRVEL 60

Query: 68  HIWDTAGQDDYDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVNHFCKKVPIIVV 127
            +WDT+G   YD +RPL Y D+  +LLCFD++ P + D+   +W  E+  +C    ++++
Sbjct: 61  SLWDTSGSPYYDNVRPLCYSDSDAVLLCFDISRPETVDSALKKWRTEILDYCPSTRVLLI 120

Query: 128 GCKTDLCKDKSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHD-NVHAVFQEA 186
           GCKTDL  D S + +L      P++Y +G  +A+ +GA  YLE SA   + ++H++F+ A
Sbjct: 121 GCKTDLRTDLSTLMELSHQKQAPISYEQGCAIAKQLGAEIYLEGSAFTSEKSIHSIFRTA 180

Query: 187 AEVALSSRGR 196
           + + L+    
Sbjct: 181 SMLCLNKPSP 190


>6HUF-A nrPDB
          Length = 182

 Score =  190 bits (484), Expect = 3e-49,   Method: Composition-based stats.
 Identities = 49/187 (26%), Positives = 85/187 (45%), Gaps = 17/187 (9%)

Query: 18  VKVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYM-VNLQVKGKPVHLHIWDTAGQD 76
           +K + +GD G GKTS+L  + DG F   +  TV   +    +    K + L +WDTAG +
Sbjct: 10  IKFLALGDSGVGKTSVLYQYTDGKFNSKFITTVGIDFREKTIYRNDKRIKLQLWDTAGLE 69

Query: 77  DYDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVN--HFCKKVPIIVVGCKTDLC 134
            +  L   F+ DA   LL FD+T+  SF N+ N W  ++    + +   I++ G K+DL 
Sbjct: 70  RFRSLTTAFFRDAMGFLLLFDLTNEESFLNVRN-WISQLKTHAYSENPDIVLCGNKSDLE 128

Query: 135 KDKSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNVHAVFQEAAEVALSSR 194
            ++             V     +++A   G + Y E SA    N+    +   ++ +   
Sbjct: 129 DER------------VVAAAEARQLAEHYG-IPYFETSAANGTNISQAIEMLLDLIMKRM 175

Query: 195 GRNFWRR 201
            R+  + 
Sbjct: 176 ERSVDKS 182


>5UB8-A nrPDB
          Length = 222

 Score =  190 bits (484), Expect = 3e-49,   Method: Composition-based stats.
 Identities = 49/185 (26%), Positives = 78/185 (42%), Gaps = 16/185 (8%)

Query: 18  VKVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERY-MVNLQVKGKPVHLHIWDTAGQD 76
            K+VL+GD G GK++LL  F    F      T+   +    L++ GK V   IWDTAGQ+
Sbjct: 16  YKIVLIGDSGVGKSNLLSRFTRDEFNLESRSTIGVEFATRTLEIDGKRVKAQIWDTAGQE 75

Query: 77  DYDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVNHFCK-KVPIIVVGCKTDLCK 135
            Y  +   +Y  A   L+ +D+    S++++  RW  E+       + I +VG K+DL  
Sbjct: 76  RYRAITSAYYRGAVGALIVYDIAKTESYESVS-RWLKELKEHADANIIIELVGNKSDLDH 134

Query: 136 DKSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNVHAVFQEAAEVALSSRG 195
                       L  V     +  A     + + E SA   DNV   F +  +       
Sbjct: 135 ------------LRAVPTEEAKNFAMENN-LLFTEASALSSDNVDLSFHQLLKNIYEMIS 181

Query: 196 RNFWR 200
           ++   
Sbjct: 182 KHQLE 186


>4PHF-A nrPDB
          Length = 184

 Score =  190 bits (483), Expect = 4e-49,   Method: Composition-based stats.
 Identities = 56/193 (29%), Positives = 90/193 (46%), Gaps = 19/193 (9%)

Query: 8   GEEAPPGVRSVKVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERY-MVNLQVKGKPV- 65
           G  +      +KV+++GD G GKTSL+  + +  +   Y  T+   +    + V G  V 
Sbjct: 1   GHMSSRKKNILKVIILGDSGVGKTSLMHRYVNDKYSCQYKATIGADFLTKEVTVDGDKVA 60

Query: 66  HLHIWDTAGQDDYDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVNHFC-----K 120
            + +WDTAGQ+ +  L   FY  A   +L +DVT+ +SF+NI   W  E          +
Sbjct: 61  TMQVWDTAGQERFQSLGVAFYRGADCCVLVYDVTNASSFENI-KSWRDEFLVHANVNSPE 119

Query: 121 KVPIIVVGCKTDLCKDKSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNVH 180
             P +++G K D  + K +           V+    QE+A+S+G +     SA+   NV 
Sbjct: 120 TFPFVILGNKIDAEESKKI-----------VSEKSAQELAKSLGDIPLFLTSAKNAINVD 168

Query: 181 AVFQEAAEVALSS 193
             F+E A  AL  
Sbjct: 169 TAFEEIARSALQQ 181


>3BC1-A nrPDB
          Length = 195

 Score =  190 bits (482), Expect = 4e-49,   Method: Composition-based stats.
 Identities = 52/197 (26%), Positives = 87/197 (44%), Gaps = 27/197 (13%)

Query: 18  VKVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMVNLQV-----------KGKPVH 66
           +K + +GD G GKTS+L  + DG F   +  TV   +     V           +G+ +H
Sbjct: 12  IKFLALGDSGVGKTSVLYQYTDGKFNSKFITTVGIDFREKRVVYRANGPDGAVGRGQRIH 71

Query: 67  LHIWDTAGQDDYDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVN--HFCKKVPI 124
           L +WDTAG + +  L   F+ DA   LL FD+T+  SF N+ N W  ++    + +   I
Sbjct: 72  LQLWDTAGLERFRSLTTAFFRDAMGFLLLFDLTNEQSFLNVRN-WISQLQMHAYSENPDI 130

Query: 125 IVVGCKTDLCKDKSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNVHAVFQ 184
           ++ G K+DL   +             V     +E+A   G + Y E SA    N+    +
Sbjct: 131 VLCGNKSDLEDQR------------AVKEEEARELAEKYG-IPYFETSAANGTNISHAIE 177

Query: 185 EAAEVALSSRGRNFWRR 201
              ++ +    R+  + 
Sbjct: 178 MLLDLIMKRMERSVDKS 194


>4KYI-B nrPDB
          Length = 170

 Score =  190 bits (482), Expect = 5e-49,   Method: Composition-based stats.
 Identities = 46/176 (26%), Positives = 80/176 (45%), Gaps = 16/176 (9%)

Query: 17  SVKVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMV-NLQVKGKPVHLHIWDTAGQ 75
             K+VL+G+   GK+SL++ F  G F E    T+   ++   + +    V   IWDTAG 
Sbjct: 9   QFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDTTVKFEIWDTAGL 68

Query: 76  DDYDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVNHFC-KKVPIIVVGCKTDLC 134
           + Y  L P++Y  A   ++ +D+T+ ++F    N W  E+       + I + G K DL 
Sbjct: 69  ERYHSLAPMYYRGAQAAIVVYDITNTDTFARAKN-WVKELQRQASPNIVIALAGNKADLA 127

Query: 135 KDKSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNVHAVFQEAAEVA 190
             +             V +   Q  A    ++ ++E SA+   NV+ +F   A+  
Sbjct: 128 SKR------------AVEFQEAQAYADD-NSLLFMETSAKTAMNVNEIFMAIAKKL 170


>2IEZ-A nrPDB
          Length = 220

 Score =  189 bits (481), Expect = 6e-49,   Method: Composition-based stats.
 Identities = 52/192 (27%), Positives = 83/192 (43%), Gaps = 27/192 (14%)

Query: 18  VKVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMVNLQVKGKP-----------VH 66
           +K++ +GD G GKT+ L  + D  F   +  TV   +     V               VH
Sbjct: 12  IKLLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYDTQGADGASGKAFKVH 71

Query: 67  LHIWDTAGQDDYDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVN--HFCKKVPI 124
           L +WDTAG + +  L   F+ DA   LL FD+TS  SF N+ N W  ++    +C+   I
Sbjct: 72  LQLWDTAGLERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVRN-WMSQLQANAYCENPDI 130

Query: 125 IVVGCKTDLCKDKSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNVHAVFQ 184
           +++G K DL   +             V   + +E+A   G + Y E SA    NV    +
Sbjct: 131 VLIGNKADLPDQR------------EVNERQARELAEKYG-IPYFETSAATGQNVEKSVE 177

Query: 185 EAAEVALSSRGR 196
              ++ +    +
Sbjct: 178 TLLDLIMKRMEK 189


>2IEY-A nrPDB
          Length = 195

 Score =  188 bits (479), Expect = 1e-48,   Method: Composition-based stats.
 Identities = 52/192 (27%), Positives = 83/192 (43%), Gaps = 27/192 (14%)

Query: 18  VKVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMVNLQVKGKP-----------VH 66
           +K++ +GD G GKT+ L  + D  F   +  TV   +     V               VH
Sbjct: 12  IKLLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYDTQGADGASGKAFKVH 71

Query: 67  LHIWDTAGQDDYDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVN--HFCKKVPI 124
           L +WDTAG + +  L   F+ DA   LL FD+TS  SF N+ N W  ++    +C+   I
Sbjct: 72  LQLWDTAGLERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVRN-WMSQLQANAYCENPDI 130

Query: 125 IVVGCKTDLCKDKSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNVHAVFQ 184
           +++G K DL   +             V   + +E+A   G + Y E SA    NV    +
Sbjct: 131 VLIGNKADLPDQR------------EVNERQARELAEKYG-IPYFETSAATGQNVEKSVE 177

Query: 185 EAAEVALSSRGR 196
              ++ +    +
Sbjct: 178 TLLDLIMKRMEK 189


>6IYB-A nrPDB
          Length = 199

 Score =  188 bits (477), Expect = 2e-48,   Method: Composition-based stats.
 Identities = 55/183 (30%), Positives = 79/183 (43%), Gaps = 21/183 (11%)

Query: 18  VKVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERY-MVNLQVKGKPVHLHIWDTAGQD 76
           +KV+++GD G GKTSL+  + +  F   Y  T+   +    + V  + V + IWDTAG +
Sbjct: 14  LKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGLE 73

Query: 77  DYDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEV-----NHFCKKVPIIVVGCKT 131
            +      FY  A   +L FDVT+PN+F  + + W  E          +  P +V+G K 
Sbjct: 74  RFQS-GVAFYRGADCCVLVFDVTAPNTFKTL-DSWRDEFLIQASPRDPENFPFVVLGNKI 131

Query: 132 DLCKDKSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNVHAVFQEAAEVAL 191
           DL                 V   R Q    S   + Y E SA+   NV   FQ  A  AL
Sbjct: 132 DLEN-------------RQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIARNAL 178

Query: 192 SSR 194
              
Sbjct: 179 KQE 181


>1YVD-A nrPDB
          Length = 169

 Score =  187 bits (476), Expect = 3e-48,   Method: Composition-based stats.
 Identities = 44/177 (24%), Positives = 88/177 (49%), Gaps = 14/177 (7%)

Query: 15  VRSVKVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYM-VNLQVKGKPVHLHIWDTA 73
           +R +KV L+GD G GK+S++  F + +F  +  PT+   +M   +Q + +     IWDTA
Sbjct: 3   LRELKVCLLGDTGVGKSSIVWRFVEDSFDPNINPTIGASFMTKTVQYQNELHKFLIWDTA 62

Query: 74  GQDDYDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVNHFCKKVPIIVVGCKTDL 133
           GQ+ +  L P++Y  ++  ++ +D+T   +F  + N       H    + + + G K DL
Sbjct: 63  GQERFRALAPMYYRGSAAAIIVYDITKEETFSTLKNWVRELRQHGPPSIVVAIAGNKCDL 122

Query: 134 CKDKSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNVHAVFQEAAEVA 190
              + ++ +              ++ A S+ A+ ++E SA+   N++ +F E +   
Sbjct: 123 TDVREVMER------------DAKDYADSIHAI-FVETSAKNAININELFIEISRRI 166


>5CM8-B nrPDB
          Length = 203

 Score =  185 bits (470), Expect = 1e-47,   Method: Composition-based stats.
 Identities = 54/193 (27%), Positives = 84/193 (43%), Gaps = 14/193 (7%)

Query: 6   AAGEEAPPGVRSVKVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMVNLQVKGKPV 65
           +  ++   G    KV++VG GG GK++L + F    F E Y PT  + Y   + + G+ V
Sbjct: 2   SMSKKPTAGPALHKVIMVGSGGVGKSALTLQFMYDEFVEDYEPTKADSYRKKVVLDGEEV 61

Query: 66  HLHIWDTAGQDDYDRLRPLFYPDASVLLLCFDVTSPNSFDNIFN-RWYPEVNHFCKKVPI 124
            + I DTAGQ+DY  +R  ++      L  F +T   SF      R         + +P 
Sbjct: 62  QIDILDTAGQEDYAAIRDNYFRSGEGFLCVFSITDDESFQATQEFREQILRVKNDESIPF 121

Query: 125 IVVGCKTDLCKDKSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNVHAVFQ 184
           ++VG K DL   +             V     Q  A+   AV Y+E SA+  +NV  VF 
Sbjct: 122 LLVGNKCDLNDKRK------------VPLSECQLRAQQW-AVPYVETSAKTRENVDKVFF 168

Query: 185 EAAEVALSSRGRN 197
           +      S +  +
Sbjct: 169 DLMREIRSRKTED 181


>3BFK-A nrPDB
          Length = 181

 Score =  185 bits (469), Expect = 1e-47,   Method: Composition-based stats.
 Identities = 53/187 (28%), Positives = 86/187 (45%), Gaps = 17/187 (9%)

Query: 18  VKVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERY-MVNLQVKG-KPVHLHIWDTAGQ 75
            K+VL+GD G GK++LL  F    F      T+   +   ++Q+K  K +   IWDTAGQ
Sbjct: 8   FKIVLIGDSGVGKSNLLSRFTRDEFNLESKSTIGVEFATKSIQLKNNKIIKAQIWDTAGQ 67

Query: 76  DDYDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVNHFCK-KVPIIVVGCKTDLC 134
           + Y  +   +Y  A   LL +D+T  NSF+NI  +W  E+       + I++VG K+DL 
Sbjct: 68  ERYRAITSAYYRGAVGALLVYDITKKNSFENI-EKWLKELRDNADSNIVILLVGNKSDLK 126

Query: 135 KDKSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNVHAVFQEAAEVALSSR 194
                        L  +  +   + A+    +A++E SA    NV   F +      + R
Sbjct: 127 H------------LRVINDNDATQYAKKEK-LAFIETSALEATNVELAFHQLLNEIYNVR 173

Query: 195 GRNFWRR 201
            +    +
Sbjct: 174 QKKQATK 180


>1Z06-A nrPDB
          Length = 189

 Score =  185 bits (469), Expect = 2e-47,   Method: Composition-based stats.
 Identities = 49/189 (25%), Positives = 84/189 (44%), Gaps = 23/189 (12%)

Query: 8   GEEAPPGVRS--VKVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMVN-LQVKGKP 64
           G   P G RS   K++++GD   GKT L   F  G FP+    T+   +    + + G+ 
Sbjct: 9   GSLVPRGSRSRIFKIIVIGDSNVGKTCLTYRFCAGRFPDRTEATIGVDFRERAVDIDGER 68

Query: 65  VHLHIWDTAGQDDYD-RLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVNHF--CKK 121
           + + +WDTAGQ+ +   +   +Y +   ++  +D+T+  SF ++   W  E         
Sbjct: 69  IKIQLWDTAGQERFRKSMVQHYYRNVHAVVFVYDMTNMASFHSLPA-WIEECKQHLLAND 127

Query: 122 VPIIVVGCKTDLCKDKSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSAR---LHDN 178
           +P I+VG K DL                 V     Q+ A +  ++   E SA+    +D+
Sbjct: 128 IPRILVGNKCDLR------------SAIQVPTDLAQKFADTH-SMPLFETSAKNPNDNDH 174

Query: 179 VHAVFQEAA 187
           V A+F   A
Sbjct: 175 VEAIFMTLA 183


>3RWM-B nrPDB
          Length = 185

 Score =  185 bits (469), Expect = 2e-47,   Method: Composition-based stats.
 Identities = 48/191 (25%), Positives = 78/191 (40%), Gaps = 16/191 (8%)

Query: 8   GEEAPPGVRSVKVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERY-MVNLQVKGKPVH 66
           G          K+VL+GD G GK++LL  F    F      T+   +    ++V+ K + 
Sbjct: 1   GAMGYDYDYLFKIVLIGDSGVGKSNLLSRFTTDEFNIESKSTIGVEFATRTIEVENKKIK 60

Query: 67  LHIWDTAGQDDYDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVNHFC-KKVPII 125
             IWDTAG + Y  +   +Y  A   L+ +D++  +S++N  N W  E+       V + 
Sbjct: 61  AQIWDTAGLERYRAITSAYYRGAVGALIVYDISKSSSYENC-NHWLTELRENADDNVAVG 119

Query: 126 VVGCKTDLCKDKSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNVHAVFQE 185
           ++G K+DL              L  V     +  A     + + E SA   DNV   F+E
Sbjct: 120 LIGNKSDLAH------------LRAVPTDEAKNFAME-NQMLFTETSALNSDNVDKAFRE 166

Query: 186 AAEVALSSRGR 196
                     +
Sbjct: 167 LIVAIFQMVSK 177


>2G77-B nrPDB
          Length = 198

 Score =  185 bits (469), Expect = 2e-47,   Method: Composition-based stats.
 Identities = 48/191 (25%), Positives = 85/191 (44%), Gaps = 21/191 (10%)

Query: 4   AQAAGEEAPPGVRSVKVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMVN-LQVKG 62
           + A+G   P   R  K++++GD   GKT L   F  G FP+    T+   +    + + G
Sbjct: 16  SGASGCLPPARSRIFKIIVIGDSNVGKTCLTYRFCAGRFPDRTEATIGVDFRERAVDIDG 75

Query: 63  KPVHLHIWDTAGQDDYD-RLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVNHF--C 119
           + + + +WDTAGQ+ +   +   +Y +   ++  +D+T+  SF ++   W  E       
Sbjct: 76  ERIKIQLWDTAGQERFRKSMVQHYYRNVHAVVFVYDMTNMASFHSLPA-WIEECKQHLLA 134

Query: 120 KKVPIIVVGCKTDLCKDKSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSAR---LH 176
             +P I+VG K DL                 V     Q+ A +  ++   E SA+    +
Sbjct: 135 NDIPRILVGNKCDLR------------SAIQVPTDLAQKFADTH-SMPLFETSAKNPNDN 181

Query: 177 DNVHAVFQEAA 187
           D+V A+F   A
Sbjct: 182 DHVEAIFMTLA 192


>2FFQ-A nrPDB
          Length = 171

 Score =  184 bits (468), Expect = 2e-47,   Method: Composition-based stats.
 Identities = 51/178 (28%), Positives = 91/178 (51%), Gaps = 16/178 (8%)

Query: 17  SVKVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYM-VNLQVKGKPVHLHIWDTAGQ 75
             K+V +G+   GKTSL+  F   +F  +Y  T+   ++   + ++ + V L +WDTAGQ
Sbjct: 2   KFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQ 61

Query: 76  DDYDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVN-HFCKKVPIIVVGCKTDLC 134
           + +  L P +  D++V ++ +D+T+ NSF     +W  +V       V I++VG KTDL 
Sbjct: 62  ERFRSLIPSYIRDSTVAVVVYDITNLNSFQQTS-KWIDDVRTERGSDVIIMLVGNKTDLA 120

Query: 135 KDKSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNVHAVFQEAAEVALS 192
             +             +T   G++ A+ + +V ++E SA+   NV  +F+  A   L 
Sbjct: 121 DKRQ------------ITIEEGEQRAKEL-SVMFIETSAKTGYNVKQLFRRVASALLE 165


>1YZU-A nrPDB
          Length = 170

 Score =  184 bits (467), Expect = 3e-47,   Method: Composition-based stats.
 Identities = 53/179 (29%), Positives = 94/179 (52%), Gaps = 16/179 (8%)

Query: 17  SVKVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERY-MVNLQVKGKPVHLHIWDTAGQ 75
           S KVVL+G+G  GKTSL++ + +  F + +  T+   +    L + GK V+L IWDTAGQ
Sbjct: 6   SFKVVLLGEGCVGKTSLVLRYCENKFNDKHITTLQASFLTKKLNIGGKRVNLAIWDTAGQ 65

Query: 76  DDYDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVNH-FCKKVPIIVVGCKTDLC 134
           + +  L P++Y D++  +L +D+T  +SF  + N W  E+      ++ + +VG K DL 
Sbjct: 66  ERFHALGPIYYRDSNGAILVYDITDEDSFQKVKN-WVKELRKMLGNEICLCIVGNKIDLE 124

Query: 135 KDKSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNVHAVFQEAAEVALSS 193
           K++             V+    +  A SVGA  +   SA+ +  +  +F +  +  + +
Sbjct: 125 KERH------------VSIQEAESYAESVGA-KHYHTSAKQNKGIEELFLDLCKRMIET 170


>5YOZ-A nrPDB
          Length = 177

 Score =  183 bits (466), Expect = 4e-47,   Method: Composition-based stats.
 Identities = 49/175 (28%), Positives = 84/175 (48%), Gaps = 15/175 (8%)

Query: 15  VRSVKVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYM-VNLQVKGKPVHLHIWDTA 73
             S K+V++G+ G GK+S+ + F    F  +   T+   ++   + + G+ +   IWDTA
Sbjct: 13  ATSAKIVMLGESGAGKSSIALRFTRNEFLANQETTIGAAFLSKTVMIDGRALKYEIWDTA 72

Query: 74  GQDDYDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVNHFCK-KVPIIVVGCKTD 132
           G + +  L P++Y  AS  L+ +D+T+  S       W  E+       + I++VG K D
Sbjct: 73  GLERFRSLAPIYYRGASGALVVYDITNSESLKKAQT-WIKELRANADPSLIIVLVGNKKD 131

Query: 133 LCKDKSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNVHAVFQEAA 187
           L              L  V++  GQ +A      A+ E SA+ ++NV  VF + A
Sbjct: 132 L------------GSLRQVSFEDGQRLAAEEQLAAFYEASAKDNNNVEQVFLDLA 174


>1D5C-A nrPDB
          Length = 162

 Score =  183 bits (465), Expect = 4e-47,   Method: Composition-based stats.
 Identities = 51/175 (29%), Positives = 84/175 (48%), Gaps = 14/175 (8%)

Query: 17  SVKVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYM-VNLQVKGKPVHLHIWDTAGQ 75
             K+V +G+   GKTS++  F    F  +Y  T+   ++   L +   PV L +WDTAGQ
Sbjct: 1   KYKLVFLGEQAVGKTSIITRFMYDTFDNNYQSTIGIDFLSKTLYLDEGPVRLQLWDTAGQ 60

Query: 76  DDYDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVNHFCKKVPIIVVGCKTDLCK 135
           + +  L P +  D++  ++ +D+T+  SF+N        +N   K V I +VG KTDL  
Sbjct: 61  ERFRSLIPSYIRDSAAAIVVYDITNRQSFENTTKWIQDILNERGKDVIIALVGNKTDLGD 120

Query: 136 DKSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNVHAVFQEAAEVA 190
                       L  VTY  G + A+    + + E SA+   N+  +F++ A   
Sbjct: 121 ------------LRKVTYEEGMQKAQEYNTM-FHETSAKAGHNIKVLFKKTASKL 162


>5LEF-A nrPDB
          Length = 191

 Score =  183 bits (465), Expect = 4e-47,   Method: Composition-based stats.
 Identities = 52/182 (28%), Positives = 91/182 (50%), Gaps = 17/182 (9%)

Query: 8   GEEAPPGVRSVKVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYM-VNLQVKGKPVH 66
           G    P +R  K+V +G+   GKTSL+  F   +F  +Y  T+   ++   + ++ + V 
Sbjct: 1   GAMGNP-LRKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVR 59

Query: 67  LHIWDTAGQDDYDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVN-HFCKKVPII 125
           L +WDTAG + +  L P +  D++V ++ +D+T+ NSF     +W  +V       V I+
Sbjct: 60  LQLWDTAGLERFRSLIPSYIRDSTVAVVVYDITNVNSFQQ-TTKWIDDVRTERGSDVIIM 118

Query: 126 VVGCKTDLCKDKSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNVHAVFQE 185
           +VG KTDL   +             V+   G+  A+ +  V ++E SA+   NV  +F+ 
Sbjct: 119 LVGNKTDLADKRQ------------VSIEEGERKAKELN-VMFIETSAKAGYNVKQLFRR 165

Query: 186 AA 187
            A
Sbjct: 166 VA 167


>3TSO-A nrPDB
          Length = 178

 Score =  183 bits (465), Expect = 5e-47,   Method: Composition-based stats.
 Identities = 48/182 (26%), Positives = 79/182 (43%), Gaps = 16/182 (8%)

Query: 18  VKVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMV-NLQVKGKPVHLHIWDTAGQD 76
            KVVL+G+ G GKT+LL  F    F      T+   +    + +    V   IWDTAG +
Sbjct: 11  FKVVLIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVMLGTAAVKAQIWDTAGLE 70

Query: 77  DYDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEV-NHFCKKVPIIVVGCKTDLCK 135
            Y  +   +Y  A   LL FD+T   ++  +  RW  E+ +H    + +++VG K+DL +
Sbjct: 71  RYRAITSAYYRGAVGALLVFDLTKHQTY-AVVERWLKELYDHAEATIVVMLVGNKSDLSQ 129

Query: 136 DKSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNVHAVFQEAAEVALSSRG 195
            +             V     +  A + G + +LE SA    NV   F+   +   +   
Sbjct: 130 AR------------EVPTEEARMFAENNG-LLFLETSALDSTNVELAFETVLKEIFAKVS 176

Query: 196 RN 197
           + 
Sbjct: 177 KQ 178


>2KE5-A nrPDB
          Length = 174

 Score =  181 bits (460), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 53/182 (29%), Positives = 80/182 (43%), Gaps = 15/182 (8%)

Query: 19  KVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMVNLQVKGKPVHLHIWDTAGQDDY 78
           KV++VG GG GK++L + F    F E Y PT  + Y   + + G+ V + I DTAG +DY
Sbjct: 5   KVIMVGSGGVGKSALTLQFMYDEFVEDYEPTKADSYRKKVVLDGEEVQIDILDTAGLEDY 64

Query: 79  DRLRPLFYPDASVLLLCFDVTSPNSFDNIFN--RWYPEVNHFCKKVPIIVVGCKTDLCKD 136
             +R  ++      LL F +T   SF            V     K+P++VVG K+DL + 
Sbjct: 65  AAIRDNYFRSGEGFLLVFSITEHESFTATAEFREQILRVKAEEDKIPLLVVGNKSDLEER 124

Query: 137 KSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNVHAVFQEAAEVALSSRGR 196
           +             V     +  A   G V Y+E SA+   NV  VF +      + +  
Sbjct: 125 RQ------------VPVEEARSKAEEWG-VQYVETSAKTRANVDKVFFDLMREIRTKKMS 171

Query: 197 NF 198
             
Sbjct: 172 EN 173


>3CON-A nrPDB
          Length = 190

 Score =  180 bits (458), Expect = 3e-46,   Method: Composition-based stats.
 Identities = 51/197 (25%), Positives = 86/197 (43%), Gaps = 19/197 (9%)

Query: 6   AAGEEAP--PGVRSVKVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMVNLQVKGK 63
           ++G E     G+   K+V+VG GG GK++L +      F + Y PT+ + Y   + + G+
Sbjct: 8   SSGRENLYFQGMTEYKLVVVGAGGVGKSALTIQLIQNHFVDEYDPTIEDSYRKQVVIDGE 67

Query: 64  PVHLHIWDTAGQDDYDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVNHF--CKK 121
              L I DTAGQ++Y  +R  +       L  F + +  SF +I N +  ++        
Sbjct: 68  TCLLDILDTAGQEEYSAMRDQYMRTGEGFLCVFAINNSKSFADI-NLYREQIKRVKDSDD 126

Query: 122 VPIIVVGCKTDLCKDKSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNVHA 181
           VP+++VG K DL                 V   +  E+A+S G + ++E SA+    V  
Sbjct: 127 VPMVLVGNKCDL-------------PTRTVDTKQAHELAKSYG-IPFIETSAKTRQGVED 172

Query: 182 VFQEAAEVALSSRGRNF 198
            F          R +  
Sbjct: 173 AFYTLVREIRQYRMKKL 189


>2GIL-A nrPDB
          Length = 162

 Score =  180 bits (458), Expect = 3e-46,   Method: Composition-based stats.
 Identities = 50/173 (28%), Positives = 88/173 (50%), Gaps = 16/173 (9%)

Query: 17  SVKVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYM-VNLQVKGKPVHLHIWDTAGQ 75
             K+V +G+   GKTSL+  F   +F  +Y  T+   ++   + ++ + V L +WDTAGQ
Sbjct: 1   KFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQ 60

Query: 76  DDYDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVN-HFCKKVPIIVVGCKTDLC 134
           + +  L P +  D++V ++ +D+T+ NSF     +W  +V       V I++VG KTDL 
Sbjct: 61  ERFRSLIPSYIRDSTVAVVVYDITNVNSFQQ-TTKWIDDVRTERGSDVIIMLVGNKTDLA 119

Query: 135 KDKSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNVHAVFQEAA 187
             +             V+   G+  A+ +  V ++E SA+   NV  +F+  A
Sbjct: 120 DKRQ------------VSIEEGERKAKELN-VMFIETSAKAGYNVKQLFRRVA 159


>2P5S-A nrPDB
          Length = 199

 Score =  180 bits (457), Expect = 4e-46,   Method: Composition-based stats.
 Identities = 54/180 (30%), Positives = 85/180 (47%), Gaps = 10/180 (5%)

Query: 16  RSVKVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERY-MVNLQVKGKPVHLHIWDTAG 74
           ++ K+VL GD   GK+S LM      F E+ + T+   + M  L V G+   L +WDTAG
Sbjct: 27  KAYKIVLAGDAAVGKSSFLMRLCKNEFRENISATLGVDFQMKTLIVDGERTVLQLWDTAG 86

Query: 75  QDDYDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVNHFC-KKVPIIVVGCKTDL 133
           Q+ +  +   ++  A  +LL +DVT   SF NI   W   +     + VPI++VG K D+
Sbjct: 87  QERFRSIAKSYFRKADGVLLLYDVTCEKSFLNIRE-WVDMIEDAAHETVPIMLVGNKADI 145

Query: 134 CKDKSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNVHAVFQEAAEVALSS 193
                        G + V  H G+++A + GA+ + E SA+   N+       A      
Sbjct: 146 RD------TAATEGQKCVPGHFGEKLAMTYGAL-FCETSAKDGSNIVEAVLHLAREVKKR 198


>2ERX-A nrPDB
          Length = 172

 Score =  180 bits (456), Expect = 5e-46,   Method: Composition-based stats.
 Identities = 48/174 (27%), Positives = 77/174 (44%), Gaps = 15/174 (8%)

Query: 15  VRSVKVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMVNLQVKGKPVHLHIWDTAG 74
               +V + G GG GK+SL++ F  G F ESY PTV + Y   +        L I DT G
Sbjct: 1   SNDYRVAVFGAGGVGKSSLVLRFVKGTFRESYIPTVEDTYRQVISCDKSICTLQITDTTG 60

Query: 75  QDDYDRLRPLFYPDASVLLLCFDVTSPNSFDNIFN--RWYPEVNHFCKKVPIIVVGCKTD 132
              +  ++ L        +L + +TS  S + +        E+    + +PI++VG K D
Sbjct: 61  SHQFPAMQRLSISKGHAFILVYSITSRQSLEELKPIYEQICEIKGDVESIPIMLVGNKCD 120

Query: 133 LCKDKSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNVHAVFQEA 186
               +             V     + +AR+    A++E SA+L+ NV  +FQE 
Sbjct: 121 ESPSR------------EVQSSEAEALARTWK-CAFMETSAKLNHNVKELFQEL 161


>5HZH-A nrPDB
          Length = 332

 Score =  179 bits (454), Expect = 9e-46,   Method: Composition-based stats.
 Identities = 70/143 (48%), Positives = 87/143 (60%)

Query: 52  ERYMVNLQVKGKPVHLHIWDTAGQDDYDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRW 111
           +     L   GKPV+L +WDTAG +DYDRLRPL YP   V L+CF + SP SF+N+  +W
Sbjct: 190 DEAAKELGSGGKPVNLGLWDTAGLEDYDRLRPLSYPQTDVFLICFSLVSPASFENVRAKW 249

Query: 112 YPEVNHFCKKVPIIVVGCKTDLCKDKSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLEC 171
           YPEV H C   PII+VG K DL  DK  + KL+   L P+TY +G  MA+ +GAV YLEC
Sbjct: 250 YPEVRHHCPNTPIILVGTKLDLRDDKDTIEKLKEKKLTPITYPQGLAMAKEIGAVKYLEC 309

Query: 172 SARLHDNVHAVFQEAAEVALSSR 194
           SA     +  VF EA    L   
Sbjct: 310 SALTQRGLKTVFDEAIRAVLCPP 332



 Score = 76.5 bits (187), Expect = 7e-15,   Method: Composition-based stats.
 Identities = 23/48 (47%), Positives = 32/48 (66%)

Query: 15 VRSVKVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMVNLQVKG 62
          ++++K V+VGDG  GKT LL+ +   AFP  Y PTVF+ Y  N+ V G
Sbjct: 4  MQAIKCVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDG 51


>2N1B-A nrPDB
          Length = 261

 Score =  178 bits (453), Expect = 1e-45,   Method: Composition-based stats.
 Identities = 56/200 (28%), Positives = 94/200 (47%), Gaps = 19/200 (9%)

Query: 2   TAAQAAGEEAPPGVRSV--KVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFER-YMVNL 58
           ++  AAG  A  G   V  K+VLVGDGG GKT+ +     G F + Y  T+    + +  
Sbjct: 34  SSRSAAGTMAAQGEPQVQFKLVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVF 93

Query: 59  QVKGKPVHLHIWDTAGQDDYDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVNHF 118
                P+  ++WDTAGQ+ +  LR  +Y  A   ++ FDVTS  ++ N+ N W+ ++   
Sbjct: 94  HTNRGPIKFNVWDTAGQEKFGGLRDGYYIQAQCAIIMFDVTSRVTYKNVPN-WHRDLVRV 152

Query: 119 CKKVPIIVVGCKTDLCKDKSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDN 178
           C+ +PI++ G K D+          R+   + + +HR + +        Y + SA+ + N
Sbjct: 153 CENIPIVLCGNKVDIKD--------RKVKAKSIVFHRKKNL-------QYYDISAKSNYN 197

Query: 179 VHAVFQEAAEVALSSRGRNF 198
               F   A   +      F
Sbjct: 198 FEKPFLWLARKLIGDPNLEF 217


>1ZC4-A nrPDB
          Length = 175

 Score =  178 bits (452), Expect = 1e-45,   Method: Composition-based stats.
 Identities = 51/181 (28%), Positives = 79/181 (43%), Gaps = 16/181 (8%)

Query: 19  KVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMVNLQVKGKPVHLHIWDTAGQDDY 78
           KV++VG GG GK++L + F    F E Y PT  + Y   + + G+ V + I DTAG +DY
Sbjct: 8   KVIMVGSGGVGKSALTLQFMYDEFVEDYEPTKADSYRKKVVLDGEEVQIDILDTAGLEDY 67

Query: 79  DRLRPLFYPDASVLLLCFDVTSPNSFDNI--FNRWYPEVNHFCKKVPIIVVGCKTDLCKD 136
             +R  ++      L  F +T   SF     F      V    + VP ++VG K+DL   
Sbjct: 68  AAIRDNYFRSGEGFLCVFSITEMESFAATADFREQILRVKE-DENVPFLLVGNKSDLEDK 126

Query: 137 KSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNVHAVFQEAAEVALSSRGR 196
           +             V+    +  A     V Y+E SA+   NV  VF +      + +  
Sbjct: 127 RQ------------VSVEEAKNRAEQWN-VNYVETSAKTRANVDKVFFDLMREIRARKME 173

Query: 197 N 197
           +
Sbjct: 174 D 174


>3WYF-A nrPDB
          Length = 219

 Score =  178 bits (452), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 56/199 (28%), Positives = 95/199 (47%), Gaps = 22/199 (11%)

Query: 1   MTAAQAAGEEAPPGVRSVKVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFER-YMVNLQ 59
           M+A  A GE     V + K+VLVGDGG GKT+ +     G F + Y  T+    + ++  
Sbjct: 1   MSAPAANGE-----VPTFKLVLVGDGGTGKTTFVKRHLTGEFEKKYIATIGVEVHPLSFY 55

Query: 60  VKGKPVHLHIWDTAGQDDYDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVNHFC 119
                +   +WDTAG + +  LR  +Y +A   ++ FDVTS  ++ N+ N W+ ++   C
Sbjct: 56  TNFGEIKFDVWDTAGLEKFGGLRDGYYINAQCAIIMFDVTSRITYKNVPN-WHRDLVRVC 114

Query: 120 KKVPIIVVGCKTDLCKDKSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNV 179
           + +PI++ G K D+        K R+   + +T+HR + +        Y + SA+ + N 
Sbjct: 115 ENIPIVLCGNKVDV--------KERKVKAKTITFHRKKNL-------QYYDISAKSNYNF 159

Query: 180 HAVFQEAAEVALSSRGRNF 198
              F   A     +    F
Sbjct: 160 EKPFLWLARKLAGNPQLEF 178


>4WA7-A nrPDB
          Length = 170

 Score =  177 bits (450), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 47/185 (25%), Positives = 84/185 (45%), Gaps = 17/185 (9%)

Query: 14  GVRSVKVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMVNLQVKGKPVHLHIWDTA 73
           G+   K+V+VG GG GK++L +      F + Y PT+ + Y   + + G+   L I DTA
Sbjct: 1   GMTEYKLVVVGAGGVGKSALTIQLIQNHFVDEYDPTIEDSYRKQVVIDGETCLLDILDTA 60

Query: 74  GQDDYDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVNHF--CKKVPIIVVGCKT 131
           G ++Y  +R  +       L  F + +  SF++I + +  ++      + VP+++VG K 
Sbjct: 61  GLEEYSAMRDQYMRTGEGFLCVFAINNTKSFEDI-HHYREQIKRVKDSEDVPMVLVGNKC 119

Query: 132 DLCKDKSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNVHAVFQEAAEVAL 191
           DL                 V   + Q++ARS G + ++E SA+    V   F        
Sbjct: 120 DL-------------PSRTVDTKQAQDLARSYG-IPFIETSAKTRQGVDDAFYTLVREIR 165

Query: 192 SSRGR 196
             + +
Sbjct: 166 KHKEK 170


>5XOJ-A nrPDB
          Length = 182

 Score =  177 bits (449), Expect = 3e-45,   Method: Composition-based stats.
 Identities = 56/199 (28%), Positives = 95/199 (47%), Gaps = 22/199 (11%)

Query: 1   MTAAQAAGEEAPPGVRSVKVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFER-YMVNLQ 59
           M+A  A GE     V + K+VLVGDGG GKT+ +     G F + Y  T+    + ++  
Sbjct: 1   MSAPAANGE-----VPTFKLVLVGDGGTGKTTFVKRHLTGEFEKKYIATIGVEVHPLSFY 55

Query: 60  VKGKPVHLHIWDTAGQDDYDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVNHFC 119
                +   +WDTAG + +  LR  +Y +A   ++ FDVTS  ++ N+ N W+ ++   C
Sbjct: 56  TNFGEIKFDVWDTAGLEKFGGLRDGYYINAQCAIIMFDVTSRITYKNVPN-WHRDLVRVC 114

Query: 120 KKVPIIVVGCKTDLCKDKSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNV 179
           + +PI++ G K D+        K R+   + +T+HR + +        Y + SA+ + N 
Sbjct: 115 ENIPIVLCGNKVDV--------KERKVKAKTITFHRKKNL-------QYYDISAKSNYNF 159

Query: 180 HAVFQEAAEVALSSRGRNF 198
              F   A     +    F
Sbjct: 160 EKPFLWLARKLAGNPQLEF 178


>5WDQ-A nrPDB
          Length = 170

 Score =  175 bits (443), Expect = 1e-44,   Method: Composition-based stats.
 Identities = 47/181 (25%), Positives = 81/181 (44%), Gaps = 17/181 (9%)

Query: 14  GVRSVKVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMVNLQVKGKPVHLHIWDTA 73
            +   K+V+VG GG GK++L +      F + Y PT+ + Y   + + G+   L I DTA
Sbjct: 4   HMTEYKLVVVGAGGVGKSALTIQLIQNHFVDEYDPTIEDSYRKQVVIDGETCLLDILDTA 63

Query: 74  GQDDYDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVNHF--CKKVPIIVVGCKT 131
           GQ++Y  +R  +       L  F + +  SF++I +++  ++        VP+++VG K 
Sbjct: 64  GQEEYSAMRDQYMRTGEGFLCVFAINNTKSFEDI-HQYREQIKRVKDSDDVPMVLVGNKC 122

Query: 132 DLCKDKSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNVHAVFQEAAEVAL 191
           D                  V   + Q++ARS G + Y+E SA+    V   F        
Sbjct: 123 D-------------AAARTVESRQAQDLARSYG-IPYIETSAKTRQGVEDAFYTLVREIR 168

Query: 192 S 192
            
Sbjct: 169 Q 169


>5UHV-A nrPDB
          Length = 166

 Score =  175 bits (443), Expect = 1e-44,   Method: Composition-based stats.
 Identities = 40/165 (24%), Positives = 69/165 (41%), Gaps = 17/165 (10%)

Query: 30  KTSLLMVFADGAFPESYTPTVFERYMVNLQVKGKPVHLHIWDTAGQDDYDRLRPLFYPDA 89
           K++L +      F + Y PT+ + Y   + + G+   L I DTAGQ++Y  +R  +    
Sbjct: 16  KSALTIQLIQNHFVDEYDPTIEDSYRKQVVIDGETCLLDILDTAGQEEYSAMRDQYMRTG 75

Query: 90  SVLLLCFDVTSPNSFDNIFNRWYPEVNHF--CKKVPIIVVGCKTDLCKDKSLVNKLRRNG 147
              L  F + +  SF +I N +  ++        VP+++VG K DL              
Sbjct: 76  EGFLCVFAINNSKSFADI-NLYREQIKRVKDSDDVPMVLVGNKCDL-------------P 121

Query: 148 LEPVTYHRGQEMARSVGAVAYLECSARLHDNVHAVFQEAAEVALS 192
              V   +  E+A+S G + ++E SA+    V   F         
Sbjct: 122 TRTVDTKQAHELAKSYG-IPFIETSAKTRQGVEDAFYTLVREIRQ 165


>4KU4-A nrPDB
          Length = 206

 Score =  175 bits (443), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 59/214 (27%), Positives = 91/214 (42%), Gaps = 37/214 (17%)

Query: 13  PGVRSV--KVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMVNLQVKGKPVHLHIW 70
           PG   +  K+ ++G+GG GKTSL +      F E+Y PT+ + Y     + G P HL I 
Sbjct: 8   PGAGKITDKIAMLGEGGVGKTSLTVNLTKHVFSETYDPTLEDSYRRQCVIDGIPSHLEIL 67

Query: 71  DTAGQDDYDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEV--------------- 115
           DTAGQ++Y  LR  +     + ++ FDVT  +SF+    R + EV               
Sbjct: 68  DTAGQEEYGALREQWIRQNELFVIVFDVTRRSSFEAA-ERLFEEVIQTKRKLDETRRHPG 126

Query: 116 NHFCKKVP-----IIVVGCKTDLCKDKSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLE 170
           +     +P     +++VG K DL   +             V    G  +A+ +G   ++E
Sbjct: 127 DRHPDDLPFAPSLVVLVGNKCDLDTRR------------EVGTLEGSSLAKKLG-CGFVE 173

Query: 171 CSARLHDNVHAVFQEAAEVALSSRGRNFWRRITQ 204
            SA+L  NV   F      A   R R       +
Sbjct: 174 TSAKLGTNVEEAFFSVVR-ADRRRKREVTDEEQR 206


>2ERY-A nrPDB
          Length = 172

 Score =  172 bits (436), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 48/169 (28%), Positives = 75/169 (44%), Gaps = 16/169 (9%)

Query: 30  KTSLLMVFADGAFPESYTPTVFERYMVNLQVKGKPVHLHIWDTAGQDDYDRLRPLFYPDA 89
           K++L + F    F   Y PT+ + Y     +  +   L I DTAGQ+++  +R  +    
Sbjct: 18  KSALTIQFIQSYFVTDYDPTIEDSYTKQCVIDDRAARLDILDTAGQEEFGAMREQYMRTG 77

Query: 90  SVLLLCFDVTSPNSFDNIFN--RWYPEVNHFCKKVPIIVVGCKTDLCKDKSLVNKLRRNG 147
              LL F VT   SF+ I+   R    V     + P+I++G K DL   +          
Sbjct: 78  EGFLLVFSVTDRGSFEEIYKFQRQILRVKDR-DEFPMILIGNKADLDHQRQ--------- 127

Query: 148 LEPVTYHRGQEMARSVGAVAYLECSARLHDNVHAVFQEAAEVALSSRGR 196
              VT   GQ++AR +  V Y+E SA++  NV   F E   V    + +
Sbjct: 128 ---VTQEEGQQLARQLK-VTYMEASAKIRMNVDQAFHELVRVIRKFQEQ 172


>5WDR-A nrPDB
          Length = 171

 Score =  171 bits (435), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 43/165 (26%), Positives = 71/165 (43%), Gaps = 16/165 (9%)

Query: 30  KTSLLMVFADGAFPESYTPTVFERYMVNLQVKGKPVHLHIWDTAGQDDYDRLRPLFYPDA 89
           K++L +      F   Y PT+ + Y  ++ +  +   L I DTAGQ+DY  +R  +    
Sbjct: 20  KSALTIQLIQQHFVTEYDPTIEDSYRKHVSIDDEACLLDILDTAGQEDYSAMRDQYMRTG 79

Query: 90  SVLLLCFDVTSPNSFDNI--FNRWYPEVNHFCKKVPIIVVGCKTDLCKDKSLVNKLRRNG 147
              L  + + S  S D I  F      V     +VP+I+VG K DL + +          
Sbjct: 80  EGFLCVYSIDSQQSLDEIHSFREQILRVKDQ-DEVPMILVGNKCDLEEHR---------- 128

Query: 148 LEPVTYHRGQEMARSVGAVAYLECSARLHDNVHAVFQEAAEVALS 192
              V+   GQ +A+S  ++ ++E SA+   NV   F +       
Sbjct: 129 --EVSTEAGQAVAKSY-SIPFMETSAKKRINVEEAFYQLVREIRK 170


>5UWI-A nrPDB
          Length = 237

 Score =  171 bits (435), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 50/183 (27%), Positives = 86/183 (46%), Gaps = 17/183 (9%)

Query: 17  SVKVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFER-YMVNLQVKGKPVHLHIWDTAGQ 75
             K+VLVGDGG GKT+ +     G F + Y  T+    + +       P+  ++WDTAGQ
Sbjct: 31  QFKLVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGPIKFNVWDTAGQ 90

Query: 76  DDYDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVNHFCKKVPIIVVGCKTDLCK 135
           + +  LR  +Y  A   ++ FDVTS  ++ N+ N W+ ++   C+ +PI++ G K D+  
Sbjct: 91  EKFGGLRDGYYIQAQCAIIMFDVTSRVTYKNVPN-WHRDLVRVCENIPIVLCGNKVDIKD 149

Query: 136 DKSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNVHAVFQEAAEVALSSRG 195
                   R+   + + +HR + +        Y + SA+ + N    F   A   +    
Sbjct: 150 --------RKVKAKSIVFHRKKNL-------QYYDISAKSNYNFEKPFLWLARKLIGDPN 194

Query: 196 RNF 198
             F
Sbjct: 195 LEF 197


>5CLL-A nrPDB
          Length = 191

 Score =  171 bits (435), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 50/183 (27%), Positives = 86/183 (46%), Gaps = 17/183 (9%)

Query: 17  SVKVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFER-YMVNLQVKGKPVHLHIWDTAGQ 75
             K+VLVGDGG GKT+ +     G F + Y  T+    + +       P+  ++WDTAGQ
Sbjct: 10  QFKLVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGPIKFNVWDTAGQ 69

Query: 76  DDYDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVNHFCKKVPIIVVGCKTDLCK 135
           + +  LR  +Y  A   ++ FDVTS  ++ N+ N W+ ++   C+ +PI++ G K D+  
Sbjct: 70  EKFGGLRDGYYIQAQCAIIMFDVTSRVTYKNVPN-WHRDLVRVCENIPIVLCGNKVDIKD 128

Query: 136 DKSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNVHAVFQEAAEVALSSRG 195
                   R+   + + +HR + +        Y + SA+ + N    F   A   +    
Sbjct: 129 --------RKVKAKSIVFHRKKNL-------QYYDISAKSNYNFEKPFLWLARKLIGDPN 173

Query: 196 RNF 198
             F
Sbjct: 174 LEF 176


>2ATV-A nrPDB
          Length = 196

 Score =  171 bits (434), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 49/188 (26%), Positives = 80/188 (42%), Gaps = 18/188 (9%)

Query: 10  EAPPGVRSVKVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMVNLQVKGKPVHLHI 69
           ++      VK+ + G  G GK++L++ F    F   Y PT+   Y     +  + V + I
Sbjct: 21  QSMAKSAEVKLAIFGRAGVGKSALVVRFLTKRFIWEYDPTLESTYRHQATIDDEVVSMEI 80

Query: 70  WDTAGQDDYDRLRPLFYPDASVLLLCFDVTSPNSFDNI--FNRWYPEVNHFCKKVPIIVV 127
            DTAGQ+D    R          +L +D+T   SF+ +        E+    K V +I+V
Sbjct: 81  LDTAGQED-TIQREGHMRWGEGFVLVYDITDRGSFEEVLPLKNILDEIKK-PKNVTLILV 138

Query: 128 GCKTDLCKDKSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHD-NVHAVFQEA 186
           G K DL   +             V+   G+++A  + A A+ ECSA   + N+  +F E 
Sbjct: 139 GNKADLDHSRQ------------VSTEEGEKLATEL-ACAFYECSACTGEGNITEIFYEL 185

Query: 187 AEVALSSR 194
                  R
Sbjct: 186 CREVRRRR 193


>4FMC-F nrPDB
          Length = 117

 Score =  171 bits (433), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 41/116 (35%), Positives = 71/116 (61%), Gaps = 3/116 (2%)

Query: 20  VVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMV-NLQVKGKPVHLHIWDTAGQDDY 78
           ++L+GD G GK+ LL+ FAD  + ESY  T+   + +  +++ GK + L IWDTAGQ+ +
Sbjct: 1   LLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQERF 60

Query: 79  DRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVNHFC-KKVPIIVVGCKTDL 133
             +   +Y  A  +++ +DVT   SF+N+  +W  E++ +  + V  ++VG K DL
Sbjct: 61  RTITSSYYRGAHGIIVVYDVTDQESFNNV-KQWLQEIDRYASENVNKLLVGNKCDL 115


>2FN4-A nrPDB
          Length = 181

 Score =  170 bits (432), Expect = 3e-43,   Method: Composition-based stats.
 Identities = 51/192 (26%), Positives = 80/192 (41%), Gaps = 16/192 (8%)

Query: 9   EEAPPGVRSVKVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMVNLQVKGKPVHLH 68
              PP   + K+V+VG GG GK++L + F    F   Y PT+ + Y     V G P  L 
Sbjct: 1   SMDPPPSETHKLVVVGGGGVGKSALTIQFIQSYFVSDYDPTIEDSYTKICSVDGIPARLD 60

Query: 69  IWDTAGQDDYDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVNHFC--KKVPIIV 126
           I DTAGQ+++  +R  +       LL F +    SF+ +  + + ++         P+++
Sbjct: 61  ILDTAGQEEFGAMREQYMRAGHGFLLVFAINDRQSFNEVG-KLFTQILRVKDRDDFPVVL 119

Query: 127 VGCKTDLCKDKSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNVHAVFQEA 186
           VG K DL   +             V          S   VAY E SA+L  NV   F++ 
Sbjct: 120 VGNKADLESQRQ------------VPRSEASAFGASHH-VAYFEASAKLRLNVDEAFEQL 166

Query: 187 AEVALSSRGRNF 198
                  + +  
Sbjct: 167 VRAVRKYQEQEL 178


>1Z22-A nrPDB
          Length = 168

 Score =  170 bits (431), Expect = 4e-43,   Method: Composition-based stats.
 Identities = 48/178 (26%), Positives = 84/178 (47%), Gaps = 15/178 (8%)

Query: 17  SVKVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYM-VNLQVKGKPVHLHIWDTAGQ 75
           ++K+V+VG+G  GK+S++  +  G F + Y  T+   ++   +QV  + V L +WDTAGQ
Sbjct: 5   AIKMVVVGNGAVGKSSMIQRYCKGIFTKDYKKTIGVDFLERQIQVNDEDVRLMLWDTAGQ 64

Query: 76  DDYDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVNHFCKKVPIIVVGCKTDLCK 135
           +++D +   +Y  A   +L F  T   SF+ I + W  +V      +P  +V  K DL  
Sbjct: 65  EEFDAITKAYYRGAQACVLVFSTTDRESFEAISS-WREKVVAEVGDIPTALVQNKIDLLD 123

Query: 136 DKSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNVHAVFQEAAEVALSS 193
           D              +     + +A+ +  + +   S +   NV  VF+  AE  L  
Sbjct: 124 D------------SCIKNEEAEGLAKRLK-LRFYRTSVKEDLNVSEVFKYLAEKHLQK 168


>3T5G-A nrPDB
          Length = 181

 Score =  170 bits (431), Expect = 4e-43,   Method: Composition-based stats.
 Identities = 56/197 (28%), Positives = 95/197 (48%), Gaps = 17/197 (8%)

Query: 12  PPGVRSVKVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMVNLQVKGKPVHLHIWD 71
            P  +S K+ ++G    GK+SL + F +G F +SY PT+   +   + V G+  HL + D
Sbjct: 1   MPQSKSRKIAILGYRSVGKSSLTIQFVEGQFVDSYDPTIENTFTKLITVNGQEYHLQLVD 60

Query: 72  TAGQDDYDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVNHFCK-KVPIIVVGCK 130
           TAGQD+Y      +  D +  +L + VTS  SF+ I       ++   K ++PI++VG K
Sbjct: 61  TAGQDEYSIFPQTYSIDINGYILVYSVTSIKSFEVIKVIHGKLLDMVGKVQIPIMLVGNK 120

Query: 131 TDLCKDKSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNVHAVFQEAAEVA 190
            DL  ++             ++Y  G+ +A S  A A+LE SA+ +     VF+    + 
Sbjct: 121 KDLHMER------------VISYEEGKALAESWNA-AFLESSAKENQTAVDVFR---RII 164

Query: 191 LSSRGRNFWRRITQGFC 207
           L +   +      +  C
Sbjct: 165 LEAEKMDGACSQGKSSC 181


>3OES-A nrPDB
          Length = 201

 Score =  166 bits (422), Expect = 5e-42,   Method: Composition-based stats.
 Identities = 59/182 (32%), Positives = 87/182 (47%), Gaps = 14/182 (7%)

Query: 10  EAPPGVRSVKVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMVNLQVKGKPVHLHI 69
           +  P VR  KVV++G    GKTSL   F +G F E Y PTV   Y   + +     HLH+
Sbjct: 17  QGMPLVRYRKVVILGYRCVGKTSLAHQFVEGEFSEGYDPTVENTYSKIVTLGKDEFHLHL 76

Query: 70  WDTAGQDDYDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYP-EVNHFCKKVPIIVVG 128
            DTAGQD+Y  L   F       +L + VTS +SF  I + +      H   +VP+++VG
Sbjct: 77  VDTAGQDEYSILPYSFIIGVHGYVLVYSVTSLHSFQVIESLYQKLHEGHGKTRVPVVLVG 136

Query: 129 CKTDLCKDKSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNVHAVFQEAAE 188
            K DL  ++             V    G+++A S GA  ++E SAR +     +F +  +
Sbjct: 137 NKADLSPER------------EVQAVEGKKLAESWGA-TFMESSARENQLTQGIFTKVIQ 183

Query: 189 VA 190
             
Sbjct: 184 EI 185


>3PIR-A nrPDB
          Length = 183

 Score =  166 bits (421), Expect = 5e-42,   Method: Composition-based stats.
 Identities = 43/167 (25%), Positives = 75/167 (44%), Gaps = 17/167 (10%)

Query: 30  KTSLLMVFADGAFPESYTPTVFERYMVNLQVKGKPVHLHIWDTAGQDDYDRLRPLFYPDA 89
           K++L + F    F   Y PT+ + Y+ + ++  +   L + DTAGQ+++  +R  +    
Sbjct: 31  KSALTIQFFQKIFVPEYDPTIEDSYLKHTEIDNQWAILDVLDTAGQEEFSAMREQYMRTG 90

Query: 90  SVLLLCFDVTSPNSFDNI--FNRWYPEVNHFCKKVPIIVVGCKTDLCKDKSLVNKLRRNG 147
              L+ + VT   SF+++  F++    V    +  P+I+V  K DL              
Sbjct: 91  DGFLIVYSVTDKASFEHVDRFHQLILRVKDR-ESFPMILVANKVDLMH------------ 137

Query: 148 LEPVTYHRGQEMARSVGAVAYLECSARL-HDNVHAVFQEAAEVALSS 193
           L  VT  +G+EMA     + Y+E SA+    NV   F +   V    
Sbjct: 138 LRKVTRDQGKEMATKYN-IPYIETSAKDPPLNVDKTFHDLVRVIRQQ 183


>3CBQ-A nrPDB
          Length = 195

 Score =  161 bits (407), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 48/183 (26%), Positives = 77/183 (42%), Gaps = 16/183 (8%)

Query: 18  VKVVLVGDGGCGKTSLLMVFADGAFPESYTP-TVFERYMVNLQVKGKPVHLHIWDTAGQD 76
            KV+LVG+ G GK++L   F       ++ P    + Y   + V  + V L ++D   Q 
Sbjct: 24  FKVMLVGESGVGKSTLAGTFGGLQGDSAHEPENPEDTYERRIMVDKEEVTLVVYDIWEQG 83

Query: 77  DYD-RLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVNHFCK-KVPIIVVGCKTDLC 134
           D    LR          L+ F VT   SF  +               +P+I+VG K+DL 
Sbjct: 84  DAGGWLRDHCLQTGDAFLIVFSVTDRRSFSKVPETLLRLRAGRPHHDLPVILVGNKSDLA 143

Query: 135 KDKSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNVHAVFQEAAEVALSSR 194
           + +             V+   G+ +A ++ +  ++E SA LH N   +F+ A       R
Sbjct: 144 RSR------------EVSLEEGRHLAGTL-SCKHIETSAALHHNTRELFEGAVRQIRLRR 190

Query: 195 GRN 197
           GRN
Sbjct: 191 GRN 193


>2CJW-A nrPDB
          Length = 192

 Score =  161 bits (407), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 42/194 (21%), Positives = 76/194 (39%), Gaps = 21/194 (10%)

Query: 14  GVRSVKVVLVGDGGCGKTSLLMVF--ADGAFPESYTPTVFERYMVNLQVKGK---PVHLH 68
           G+   +VVL+G+ G GK++L  +F     +          + Y   L V G+    + L 
Sbjct: 3   GMTYYRVVLIGEQGVGKSTLANIFAGVHDSMDSDCEVLGEDTYERTLMVDGESATIILLD 62

Query: 69  IWDTAGQDDYDRLRPLFYPDASVLLLCFDVTSPNSFDNIFN-RWYPEVNHFCKKVPIIVV 127
           +W+  G++++  L           L+ + +T   SF+     R         + +PII+V
Sbjct: 63  MWENKGENEW--LHDHCMQVGDAYLIVYSITDRASFEKASELRIQLRRARQTEDIPIILV 120

Query: 128 GCKTDLCKDKSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNVHAVFQEAA 187
           G K+DL + +             V+   G+  A  V    ++E SA +  NV  +F+   
Sbjct: 121 GNKSDLVRCR------------EVSVSEGRACA-VVFDCKFIETSAAVQHNVKELFEGIV 167

Query: 188 EVALSSRGRNFWRR 201
                 R       
Sbjct: 168 RQVRLRRDSKEKNE 181


>4CZ2-A nrPDB
          Length = 230

 Score =  160 bits (406), Expect = 3e-40,   Method: Composition-based stats.
 Identities = 36/181 (19%), Positives = 80/181 (44%), Gaps = 20/181 (11%)

Query: 18  VKVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMVNLQ--VKGKPVHLHIWDTAGQ 75
            KV+++G+ G GKTS++  +    F + Y  T+   + + +        V L +WD AG 
Sbjct: 31  FKVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVLNWDSRTLVRLQLWDIAGL 90

Query: 76  DDYDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVN---HFCKKVPI--IVVGCK 130
           + +  +  ++Y +A    + FD++  ++F+ +  +W  +++   H     PI  +++  K
Sbjct: 91  ERFGNMTRVYYKEAMGAFVVFDISRSSTFEAVL-KWKSDLDSKVHLPNGSPIPAVLLANK 149

Query: 131 TDLCKDKSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNVHAVFQEAAEVA 190
            D            +N    ++  +  +  +  G   + E SA+ + N+    +   E  
Sbjct: 150 CD------------QNKDSSMSPSQMDQFCKEHGFAGWFETSAKDNINIEEAARFLVEKM 197

Query: 191 L 191
           L
Sbjct: 198 L 198


>2G3Y-A nrPDB
          Length = 211

 Score =  160 bits (405), Expect = 4e-40,   Method: Composition-based stats.
 Identities = 42/191 (21%), Positives = 75/191 (39%), Gaps = 21/191 (10%)

Query: 13  PGVRSVKVVLVGDGGCGKTSLLMVF--ADGAFPESYTPTVFERYMVNLQVKGK---PVHL 67
            G    +VVL+G+ G GK++L  +F     +          + Y   L V G+    + L
Sbjct: 33  SGNTYYRVVLIGEQGVGKSTLANIFAGVHDSMDSDCEVLGEDTYERTLMVDGESATIILL 92

Query: 68  HIWDTAGQDDYDRLRPLFYPDASVLLLCFDVTSPNSFDNIFN-RWYPEVNHFCKKVPIIV 126
            +W+  G++++  L           L+ + +T   SF+     R         + +PII+
Sbjct: 93  DMWENKGENEW--LHDHCMQVGDAYLIVYSITDRASFEKASELRIQLRRARQTEDIPIIL 150

Query: 127 VGCKTDLCKDKSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNVHAVFQEA 186
           VG K+DL + +             V+   G+  A  V    ++E SA +  NV  +F+  
Sbjct: 151 VGNKSDLVRCR------------EVSVSEGRACA-VVFDCKFIETSAAVQHNVKELFEGI 197

Query: 187 AEVALSSRGRN 197
                  R   
Sbjct: 198 VRQVRLRRDSK 208


>2GF0-A nrPDB
          Length = 199

 Score =  158 bits (399), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 39/159 (24%), Positives = 69/159 (43%), Gaps = 16/159 (10%)

Query: 30  KTSLLMVFADGAFPESYTPTVFERYMVNLQVKGKPVHLHIWDTAGQDDYDRLRPLFYPDA 89
           K+SL++ F  G F ++Y PT+ + Y   +        L I DT G   +  ++ L     
Sbjct: 21  KSSLVLRFVKGTFRDTYIPTIEDTYRQVISCDKSVCTLQITDTTGSHQFPAMQRLSISKG 80

Query: 90  SVLLLCFDVTSPNSFDNI--FNRWYPEVNHFCKKVPIIVVGCKTDLCKDKSLVNKLRRNG 147
              +L F VTS  S + +    +   ++    + +P+++VG K D               
Sbjct: 81  HAFILVFSVTSKQSLEELGPIYKLIVQIKGSVEDIPVMLVGNKCD-------------ET 127

Query: 148 LEPVTYHRGQEMARSVGAVAYLECSARLHDNVHAVFQEA 186
              V     Q +A+     A++E SA+++ NV  +FQE 
Sbjct: 128 QREVDTREAQAVAQEWK-CAFMETSAKMNYNVKELFQEL 165


>3RAP-R nrPDB
          Length = 167

 Score =  158 bits (399), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 43/162 (26%), Positives = 74/162 (45%), Gaps = 16/162 (9%)

Query: 30  KTSLLMVFADGAFPESYTPTVFERYMVNLQVKGKPVHLHIWDTAGQDDYDRLRPLFYPDA 89
           K++L + F  G F E Y PT+ + Y   ++V   P  L I DTAG + +  +R L+  + 
Sbjct: 16  KSALTVQFVTGTFIEKYDPTIEDFYRKEIEVDSSPSVLEILDTAGTEQFASMRDLYIKNG 75

Query: 90  SVLLLCFDVTSPNSFDNIF--NRWYPEVNHFCKKVPIIVVGCKTDLCKDKSLVNKLRRNG 147
              +L + + +  SF +I         V  + +KVP+I+VG K DL  ++ + +      
Sbjct: 76  QGFILVYSLVNQQSFQDIKPMRDQIIRVKRY-EKVPVILVGNKVDLESEREVSSSE---- 130

Query: 148 LEPVTYHRGQEMARSVGAVAYLECSARLHDNVHAVFQEAAEV 189
                   G+ +A   G   ++E SA+    V  +F E    
Sbjct: 131 --------GRALAEEWG-CPFMETSAKSKTMVDELFAEIVRQ 163


>6FF8-A nrPDB
          Length = 181

 Score =  157 bits (398), Expect = 3e-39,   Method: Composition-based stats.
 Identities = 38/181 (20%), Positives = 80/181 (44%), Gaps = 20/181 (11%)

Query: 18  VKVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMVNLQ--VKGKPVHLHIWDTAGQ 75
            KV+++G+ G GKTS++  +    F + Y  T+   + + +        V L +WD AG 
Sbjct: 9   FKVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVLNWDSRTLVRLQLWDIAGL 68

Query: 76  DDYDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVN---HFCKKVPI--IVVGCK 130
           + +  +  ++Y +A    + FD++  ++F+ +  +W  +++   H     PI  +++  K
Sbjct: 69  ERFGNMTRVYYKEAVGAFVVFDISRSSTFEAVL-KWKSDLDSKVHLPNGSPIPAVLLANK 127

Query: 131 TDLCKDKSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNVHAVFQEAAEVA 190
            D  KD S             +  +  +  +  G   + E SA+ + N+    +   E  
Sbjct: 128 CDQNKDSSQ------------SPSQVDQFCKEHGFAGWFETSAKDNINIEEAARFLVEKI 175

Query: 191 L 191
           L
Sbjct: 176 L 176


>3Q72-A nrPDB
          Length = 166

 Score =  156 bits (394), Expect = 8e-39,   Method: Composition-based stats.
 Identities = 45/178 (25%), Positives = 69/178 (38%), Gaps = 15/178 (8%)

Query: 18  VKVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMVNLQVKGKPVHLHIWDTAGQDD 77
            KV+L+G  G GK++L  +F                Y  ++ V G+   L ++D   QD 
Sbjct: 3   YKVLLLGAPGVGKSALARIFGGVEDGPEAEA-AGHTYDRSIVVDGEEASLMVYDIWEQDG 61

Query: 78  YDRLRPLFYPDASVLLLCFDVTSPNSFDNIFN-RWYPEVNHFCKKVPIIVVGCKTDLCKD 136
              L           ++ + VT   SF+     R           VPII+VG K+DL + 
Sbjct: 62  GRWLPGHCMAMGDAYVIVYSVTDKGSFEKASELRVQLRRARQTDDVPIILVGNKSDLVRS 121

Query: 137 KSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNVHAVFQEAAEVALSSR 194
           +             V+   G+  A  V    ++E SA LH NV A+F+         R
Sbjct: 122 R------------EVSVDEGRACA-VVFDCKFIETSAALHHNVQALFEGVVRQIRLRR 166


>4DJT-A nrPDB
          Length = 218

 Score =  155 bits (392), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 53/176 (30%), Positives = 79/176 (44%), Gaps = 17/176 (9%)

Query: 17  SVKVVLVGDGGCGKTSLLMVFADGAFPESYTPTVF--ERYMVNLQVKGKPVHLHIWDTAG 74
           + K+ L+GDGG GKT+ +    DG F ++Y  TV      +  L  +G  +  ++WDTAG
Sbjct: 11  TYKICLIGDGGVGKTTYINRVLDGRFEKNYNATVGAVNHPVTFLDDQGNVIKFNVWDTAG 70

Query: 75  QDDYDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVNHFCKK-VPIIVVGCKTDL 133
           Q+    L+ ++Y  AS  +L FDVTS  +  N+  RW  E         PI+V   K D+
Sbjct: 71  QEKKAVLKDVYYIGASGAILFFDVTSRITCQNLA-RWVKEFQAVVGNEAPIVVCANKIDI 129

Query: 134 CKDKSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNVHAVFQEAAEV 189
              + +  KL    L+   Y              Y E SA+   N    F   A +
Sbjct: 130 KNRQKISKKLVMEVLKGKNYE-------------YFEISAKTAHNFGLPFLHLARI 172


>3Q85-A nrPDB
          Length = 169

 Score =  154 bits (390), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 44/181 (24%), Positives = 72/181 (39%), Gaps = 18/181 (9%)

Query: 18  VKVVLVGDGGCGKTSLLMVF--ADGAFPESYTPTVFERYMVNLQVKGKPVHLHIWDTAGQ 75
            KV+LVG+ G GK++L   F    G           + Y   + V  + V L ++D   Q
Sbjct: 3   FKVMLVGESGVGKSTLAGTFGGLQGDHAHEME-NSEDTYERRIMVDKEEVTLIVYDIWEQ 61

Query: 76  DDYD-RLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVNHFCK-KVPIIVVGCKTDL 133
            D    L+          L+ F VT   SF  +               +P+I+VG K+DL
Sbjct: 62  GDAGGWLQDHCLQTGDAFLIVFSVTDRRSFSKVPETLLRLRAGRPHHDLPVILVGNKSDL 121

Query: 134 CKDKSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNVHAVFQEAAEVALSS 193
            + +             V+   G+ +A ++ +  ++E SA LH N   +F+ A       
Sbjct: 122 ARSR------------EVSLEEGRHLAGTL-SCKHIETSAALHHNTRELFEGAVRQIRLR 168

Query: 194 R 194
           R
Sbjct: 169 R 169


>5XC3-A nrPDB
          Length = 176

 Score =  150 bits (378), Expect = 6e-37,   Method: Composition-based stats.
 Identities = 44/175 (25%), Positives = 83/175 (47%), Gaps = 16/175 (9%)

Query: 18  VKVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMVNLQV--KGKPVHLHIWDTAGQ 75
            K++L+G  G GK+S++  F       + +PT+   +     +   GK + L+IWDTAGQ
Sbjct: 6   YKIILIGSSGVGKSSIVHQFLFNRKISNVSPTIGAAFASKQVIAKNGKTLKLNIWDTAGQ 65

Query: 76  DDYDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVNHFCKKV-PIIVVGCKTDLC 134
           + +  +  ++Y ++   L+ FDVT   SFD+++  W  ++   C     I+VV  K D+ 
Sbjct: 66  ERFRSITKMYYTNSLGCLVVFDVTDRESFDDVY-YWINDLRINCHTTYYILVVANKIDID 124

Query: 135 KDKSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNVHAVFQEAAEV 189
           K+              V+ +  ++  R      Y+  S+   D V+ +F +  + 
Sbjct: 125 KNNWR-----------VSENEIKKFCRD-NDCDYVFASSFESDTVNNLFGKMIDK 167


>2NZJ-A nrPDB
          Length = 175

 Score =  150 bits (378), Expect = 6e-37,   Method: Composition-based stats.
 Identities = 46/173 (26%), Positives = 72/173 (41%), Gaps = 16/173 (9%)

Query: 15  VRSVKVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMVNLQVKGKPVHLHIWDTAG 74
           +   +VVL+GD G GKTSL  +FA     + +     + Y   L V G+   L + DT  
Sbjct: 2   MALYRVVLLGDPGVGKTSLASLFAGKQERDLHEQLGEDVYERTLTVDGEDTTLVVVDTWE 61

Query: 75  QDDYD--RLRPLFYPDASVLLLCFDVTSPNSFDNIFN-RWYPEVNHFCKKVPIIVVGCKT 131
            +  D    +       S  ++ + +    SF++    R      H    VPII+VG K 
Sbjct: 62  AEKLDKSWSQESCLQGGSAYVIVYSIADRGSFESASELRIQLRRTHQADHVPIILVGNKA 121

Query: 132 DLCKDKSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNVHAVFQ 184
           DL + +             V+   G+  A  V    ++E SA L  NV  +F+
Sbjct: 122 DLARCR------------EVSVEEGRACA-VVFDCKFIETSATLQHNVAELFE 161


>3E5H-A nrPDB
          Length = 178

 Score =  146 bits (369), Expect = 6e-36,   Method: Composition-based stats.
 Identities = 49/185 (26%), Positives = 83/185 (44%), Gaps = 20/185 (10%)

Query: 13  PGVRSVKVVLVGDGGCGKTSLLMVFADGAFPESYTPTVF-ERYMVNLQVKGK-PVHLHIW 70
             +R +K+V++GDG  GKTSL   FA   F + Y  T+  + ++  + + G   V L IW
Sbjct: 2   SHMRQLKIVVLGDGASGKTSLTTCFAQETFGKQYKQTIGLDFFLRRITLPGNLNVTLQIW 61

Query: 71  DTAGQDDYDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVNHFCKKVP----IIV 126
           D  GQ    ++   +   A  +LL +D+T+  SF+N+   WY  V    ++      + +
Sbjct: 62  DIGGQTIGGKMLDKYIYGAQGVLLVYDITNYQSFENL-EDWYTVVKKVSEESETQPLVAL 120

Query: 127 VGCKTDLCKDKSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNVHAVFQEA 186
           VG K DL              +  +   +     +  G  ++   SA+  D+V   FQ+ 
Sbjct: 121 VGNKIDLEH------------MRTIKPEKHLRFCQENGFSSHF-VSAKTGDSVFLCFQKV 167

Query: 187 AEVAL 191
           A   L
Sbjct: 168 AAEIL 172


>3CLV-A nrPDB
          Length = 208

 Score =  145 bits (366), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 43/218 (19%), Positives = 78/218 (35%), Gaps = 54/218 (24%)

Query: 11  APPGVRSVKVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERY---------------- 54
                 S K VL+G+   GK+S+++      F E+   T+   +                
Sbjct: 1   GMEKKSSYKTVLLGESSVGKSSIVLRLTKDTFHENTNTTIGASFCTYVVNLNDINIKNNS 60

Query: 55  -------------MVNLQVKGK---------PVHLHIWDTAGQDDYDRLRPLFYPDASVL 92
                          N+ +  +          +   IWDTAGQ+ Y  + PL+Y  A+  
Sbjct: 61  NNEKNNNINSINDDNNVIITNQHNNYNENLCNIKFDIWDTAGQERYASIVPLYYRGATCA 120

Query: 93  LLCFDVTSPNSFDNIFNRWYPEVNHFCKKVPIIVVGCKTDLCKDKSLVNKLRRNGLEPVT 152
           ++ FD+++ N+ D     W  ++        II+V  K D                  V 
Sbjct: 121 IVVFDISNSNTLDRA-KTWVNQLK-ISSNYIIILVANKID-------------KNKFQVD 165

Query: 153 YHRGQEMARSVGAVAYLECSARLHDNVHAVFQEAAEVA 190
               Q+ A+    + +++ SA+   N+  +F   AE  
Sbjct: 166 ILEVQKYAQDNN-LLFIQTSAKTGTNIKNIFYMLAEEI 202


>3C5C-A nrPDB
          Length = 187

 Score =  132 bits (332), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 51/194 (26%), Positives = 80/194 (41%), Gaps = 22/194 (11%)

Query: 6   AAGEEAP--PGVRSVKVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMVNLQVKGK 63
           ++G E     G   V + ++G  G GK++L + F    F   Y P + + Y     V  +
Sbjct: 8   SSGRENLYFQGPLEVNLAILGRRGAGKSALTVKFLTKRFISEYDPNLEDTYSSEETVDHQ 67

Query: 64  PVHLHIWDTAGQDDYD-RLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWY---PEVNHFC 119
           PVHL + DTA  D      R L +  A   L+ + V S  SFD+  +             
Sbjct: 68  PVHLRVMDTADLDTPRNCERYLNW--AHAFLVVYSVDSRQSFDSSSSYLELLALHAKETQ 125

Query: 120 KKVPIIVVGCKTDLCKDKSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLH-DN 178
           + +P +++G K D+ + +             VT   G  +A   G   + E SA L  ++
Sbjct: 126 RSIPALLLGNKLDMAQYRQ------------VTKAEGVALAGRFG-CLFFEVSACLDFEH 172

Query: 179 VHAVFQEAAEVALS 192
           V  VF EA   A  
Sbjct: 173 VQHVFHEAVREARR 186


>5C1S-A nrPDB
          Length = 391

 Score =  128 bits (323), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 40/180 (22%), Positives = 75/180 (41%), Gaps = 21/180 (11%)

Query: 14  GVRSVKVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMVNLQVKGKPVHLHIWDTA 73
           G + +++++VG  G GKT+L        F ES+     E    ++Q+    + + I D A
Sbjct: 59  GKKEIRLLVVGSSGVGKTTLC-----DCFFESHQSQGEETREKHVQIDNDFIRISISDIA 113

Query: 74  GQDDYDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVNHFCK-KVPIIVVGCKTD 132
           GQ  +       Y     +L+ +D+T   SF ++   W P++  +C     II++G K D
Sbjct: 114 GQQSFYAC-DNPYDGYDAILVMYDITELKSFTDLKTMWLPDIFLYCNIDTQIIIIGNKKD 172

Query: 133 LCKDKSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNVHAVFQEAAEVALS 192
              D+             +T    ++ A+      + E S +  D+   +F   +   L 
Sbjct: 173 QEIDRI------------ITRKEAEQFAQD-RLCQFYEISTKD-DSCQLLFDCISRDFLQ 218



 Score = 78.8 bits (193), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 37/183 (20%), Positives = 77/183 (42%), Gaps = 22/183 (12%)

Query: 17  SVKVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFER---YMVNLQVKGKPVHLHIWDTA 73
            +++++VGD   GKT+ +  FA         PT  +         +++     + + D  
Sbjct: 222 KIRMLMVGDQNVGKTTFIRKFALQ------DPTGHDFMNAITTRFEMEKIKYEIIMIDWG 275

Query: 74  GQDDYDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVNHFCKKVPIIVVGCKTDL 133
             +   +  P        +L+ +D+T+  SF NI  ++YP +N+    V  ++VG KTDL
Sbjct: 276 FYNKLLQTNPAISRTIEAILIVYDITNEESFQNIHRKYYPLINNKFSDVAGVIVGYKTDL 335

Query: 134 CKDKSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNVHAVFQEAAEVALSS 193
              +             +T      +A  +G   Y+E S++  ++  ++ +  A     +
Sbjct: 336 EAQRK------------ITMGDALTLADWLG-YKYVEMSSKDTEDHSSIIKALAHSIRIN 382

Query: 194 RGR 196
           R +
Sbjct: 383 RLK 385


>3IHW-A nrPDB
          Length = 184

 Score =  126 bits (317), Expect = 7e-30,   Method: Composition-based stats.
 Identities = 39/182 (21%), Positives = 78/182 (42%), Gaps = 17/182 (9%)

Query: 16  RSVKVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMVNLQVKGKPVHLHIWDTAGQ 75
             +KV +VG+   GK++L+  +  G + +  +P    R+   + V G+   L I D  G 
Sbjct: 19  PELKVGIVGNLSSGKSALVHRYLTGTYVQEESPEGG-RFKKEIVVDGQSYLLLIRDEGGP 77

Query: 76  DDYDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVN-HFCKKVPIIVVGCKTDLC 134
            +   L+   + DA V    F +    SF  ++N +    +     +VP+++VG +    
Sbjct: 78  PE---LQFAAWVDAVVF--VFSLEDEISFQTVYNYFLRLCSFRNASEVPMVLVGTQ---- 128

Query: 135 KDKSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNVHAVFQEAAEVALSSR 194
                 + +       +   R ++++  +    Y E  A    NV  VFQ+ A+  ++ R
Sbjct: 129 ------DAISAANPRVIDDSRARKLSTDLKRCTYYETCATYGLNVERVFQDVAQKVVALR 182

Query: 195 GR 196
            +
Sbjct: 183 KK 184


>6HLU-A nrPDB
          Length = 974

 Score =  116 bits (292), Expect = 5e-27,   Method: Composition-based stats.
 Identities = 43/191 (22%), Positives = 69/191 (36%), Gaps = 27/191 (14%)

Query: 1   MTAAQAAGEEAPPGVRSVKVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMVN--- 57
           +  A++ GE A   ++ +KV L+GDG  GKTSLL       F    + T     +     
Sbjct: 465 IEEARSKGE-ALVHLQEIKVHLIGDGMAGKTSLLKQLIGETFDPKESQTHGLNVVTKQAP 523

Query: 58  ----LQVKG--KPVHLHIWDTAGQDDYDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRW 111
               L+     K    H WD  GQ+        F   +SV +L  D  +    D+  + W
Sbjct: 524 NIKGLENDDELKECLFHFWDFGGQEIMHASHQFFMTRSSVYMLLLDSRT----DSNKHYW 579

Query: 112 YPEVNHFCKKVPIIVVGCKTDLCKDKSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLEC 171
              +  +  K P+IVV  K D     ++  K        +                +   
Sbjct: 580 LRHIEKYGGKSPVIVVMNKIDENPSYNIEQKKINERFPAIENR-------------FHRI 626

Query: 172 SARLHDNVHAV 182
           S +  D V ++
Sbjct: 627 SCKNGDGVESI 637


>3DPU-A nrPDB
          Length = 535

 Score =  116 bits (292), Expect = 5e-27,   Method: Composition-based stats.
 Identities = 43/191 (22%), Positives = 69/191 (36%), Gaps = 27/191 (14%)

Query: 1   MTAAQAAGEEAPPGVRSVKVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMVN--- 57
           +  A++ GE A   ++ +KV L+GDG  GKTSLL       F    + T     +     
Sbjct: 26  IEEARSKGE-ALVHLQEIKVHLIGDGMAGKTSLLKQLIGETFDPKESQTHGLNVVTKQAP 84

Query: 58  ----LQVKG--KPVHLHIWDTAGQDDYDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRW 111
               L+     K    H WD  GQ+        F   +SV +L  D  +    D+  + W
Sbjct: 85  NIKGLENDDELKECLFHFWDFGGQEIMHASHQFFMTRSSVYMLLLDSRT----DSNKHYW 140

Query: 112 YPEVNHFCKKVPIIVVGCKTDLCKDKSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLEC 171
              +  +  K P+IVV  K D     ++  K        +                +   
Sbjct: 141 LRHIEKYGGKSPVIVVMNKIDENPSYNIEQKKINERFPAIENR-------------FHRI 187

Query: 172 SARLHDNVHAV 182
           S +  D V ++
Sbjct: 188 SCKNGDGVESI 198


>2AL7-A nrPDB
          Length = 186

 Score =  114 bits (287), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 37/173 (21%), Positives = 66/173 (38%), Gaps = 15/173 (8%)

Query: 10  EAPPGVRS-VKVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMVNLQVKGKPVHLH 68
             P G +  +++ LVG    GKT+ + V A G F E   PTV   + +    KG  V + 
Sbjct: 14  LVPRGSKEEMELTLVGLQYSGKTTFVNVIASGQFSEDMIPTVG--FNMRKVTKGN-VTIK 70

Query: 69  IWDTAGQDDYDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVNH-FCKKVPIIVV 127
           IWD  GQ  +  +   +    + ++   D       +   N  +  ++    + +P++V+
Sbjct: 71  IWDIGGQPRFRSMWERYCRGVNAIVYMIDAADREKIEASRNELHNLLDKPQLQGIPVLVL 130

Query: 128 GCKTDLCKDKSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNVH 180
           G K DL         + +  L  +                Y   S +  DN+ 
Sbjct: 131 GNKRDLPNALDEKQLIEKMNLSAIQDRE---------ICCY-SISCKEKDNID 173


>4ILE-A nrPDB
          Length = 184

 Score =  110 bits (276), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 35/167 (20%), Positives = 63/167 (37%), Gaps = 14/167 (8%)

Query: 15  VRSVKVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMVNLQVKGKPVHLHIWDTAG 74
              +++ LVG    GKT+ + V A G F E   PTV   + +    KG  V + +WD  G
Sbjct: 20  KEEMELTLVGLQYSGKTTFVNVIASGQFNEDMIPTVG--FNMRKITKGN-VTIKLWDIGG 76

Query: 75  QDDYDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVNH-FCKKVPIIVVGCKTDL 133
           Q  +  +   +    S ++   D       +   N  +  ++    + +P++V+G K DL
Sbjct: 77  QPRFRSMWERYCRGVSAIVYMVDAADQEKIEASKNELHNLLDKPQLQGIPVLVLGNKRDL 136

Query: 134 CKDKSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNVH 180
                    + +  L  +                Y   S +  DN+ 
Sbjct: 137 PGALDEKELIEKMNLSAIQDRE---------ICCY-SISCKEKDNID 173


>4WNR-A nrPDB
          Length = 349

 Score =  107 bits (268), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 40/188 (21%), Positives = 61/188 (32%), Gaps = 21/188 (11%)

Query: 8   GEEAPPGVRSVKVVLVGDGGCGKTSLLMVFADGAFP-ESYTPTVFERYMVNLQVKGKPVH 66
           GE+ P  +  VKV+LVGDG  GKTSLL       F    +            + K K + 
Sbjct: 34  GEKKP--LNEVKVLLVGDGEAGKTSLLKRLLGEGFDGNEHQTQGINIKKWGFKDKDKEIK 91

Query: 67  LHIWDTAGQDDYDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVNHFCKKVPIIV 126
           ++ WD  GQ+        F    S+ +L  D       D     W   +  F    P++V
Sbjct: 92  VNFWDFGGQEIMHATHQFFLSKRSLYILVLDSRR----DEKAEYWLKHIRSFGGDSPVLV 147

Query: 127 VGCKTDLCKDKSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNVHAVFQEA 186
              K D      L  K  +     +                +   S +    +    Q+ 
Sbjct: 148 ALNKIDENPSFELNRKFLQEKYPSIK--------------GFFRISCKEDRGIEGFSQKL 193

Query: 187 AEVALSSR 194
            +  L   
Sbjct: 194 KKELLKVE 201


>3D6T-B nrPDB
          Length = 171

 Score =  107 bits (268), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 29/138 (21%), Positives = 59/138 (42%), Gaps = 14/138 (10%)

Query: 18  VKVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMVNLQVKGKPVH----------L 67
           +K+++VG+ G GKT+LL            +    +   V + VK  P+           L
Sbjct: 1   MKLMIVGNTGSGKTTLLQQLMK----TKKSDLGMQSATVGIDVKDWPIQIRDKRKRDLVL 56

Query: 68  HIWDTAGQDDYDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVNHFCKKVPIIVV 127
           ++WD AG++++    P F    ++ L  +D++   +  +    W   +       P+I+V
Sbjct: 57  NVWDFAGREEFYSTHPHFMTQRALYLAVYDLSKGQAEVDAMKPWLFNIKARASSSPVILV 116

Query: 128 GCKTDLCKDKSLVNKLRR 145
           G   D+  +K     + +
Sbjct: 117 GTHLDVSDEKQRKACMSK 134


>2IWR-A nrPDB
          Length = 178

 Score =  101 bits (253), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 38/189 (20%), Positives = 75/189 (39%), Gaps = 19/189 (10%)

Query: 12  PPGVRSVKVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMVNLQVKGKPVHLHIWD 71
              +  +++ ++GD   GK+SL+  F  G++ +    T  E+Y   + V G+   + I +
Sbjct: 2   MRSIPELRLGVLGDARSGKSSLIHRFLTGSY-QVLEKTESEQYKKEMLVDGQTHLVLIRE 60

Query: 72  TAGQDDYDRLRPLFYPDASVLLLCFDVTSPNSFDNIFN---RWYPEVNHFCKKVPIIVVG 128
            AG  D       F   A  ++  F +   NSF  +     +           + + +VG
Sbjct: 61  EAGAPDAK-----FSGWADAVIFVFSLEDENSFQAVSRLHGQLSSLRGEGRGGLALALVG 115

Query: 129 CKTDLCKDKSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNVHAVFQEAAE 188
            +          +++  +    V   R + +   +   +Y E  A    NV  VFQE A+
Sbjct: 116 TQ----------DRISASSPRVVGDARARALCADMKRCSYYETCATYGLNVDRVFQEVAQ 165

Query: 189 VALSSRGRN 197
             ++ R + 
Sbjct: 166 KVVTLRKQQ 174


>4C0K-A nrPDB
          Length = 423

 Score = 92.3 bits (228), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 30/129 (23%), Positives = 59/129 (45%), Gaps = 16/129 (12%)

Query: 18  VKVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMVNL-------QVKGKPVHLHIW 70
            K  ++G  G GKT +      G   E     + + +  N+       QV G+  HL + 
Sbjct: 247 YKCHVIGPKGSGKTGM----CRGFLVEDMHKLIGKEFKTNVVNCINSVQVYGQEKHLILR 302

Query: 71  DTAGQDDYDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVNHFCK-KVPIIVVGC 129
           D   +   D L+P    +  V  L +D ++P SF+ +   +   + ++ + K+P+++VG 
Sbjct: 303 DIDVRHALDPLQPQEV-NCDVACLVYDSSNPRSFEYVARIY---IKYYAESKIPVMIVGT 358

Query: 130 KTDLCKDKS 138
           K D+ + + 
Sbjct: 359 KCDMDERRQ 367


>2YC4-C nrPDB
          Length = 208

 Score = 87.2 bits (215), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 38/165 (23%), Positives = 66/165 (40%), Gaps = 22/165 (13%)

Query: 18  VKVVLVGDGGCGKTSLLMVFADG--AFPESYTPTVFERYMVN-LQVKGKPV--HLHIWDT 72
            KV +VG+   GK++L+ +F      F + Y  T     +V  + +    V   L + DT
Sbjct: 21  CKVAVVGEATVGKSALISMFTSKGSKFLKDYAMTSGVEVVVAPVTIPDTTVSVELFLLDT 80

Query: 73  AGQDDYDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVNHFCKK----VPIIVVG 128
           AG D Y      ++      +L FDV+S  SF++    W+  +          +  ++V 
Sbjct: 81  AGSDLYKEQISQYWNGVYYAILVFDVSSMESFESC-KAWFELLKSARPDRERPLRAVLVA 139

Query: 129 CKTDLCKDKSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSA 173
            KTDL   +             V     Q+ A +   + + + SA
Sbjct: 140 NKTDLPPQRH-----------QVRLDMAQDWATT-NTLDFFDVSA 172


>3LVQ-E nrPDB
          Length = 497

 Score = 86.1 bits (212), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 32/151 (21%), Positives = 58/151 (38%), Gaps = 6/151 (3%)

Query: 2   TAAQAAGEEAPPGVRSVKVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMVNLQVK 61
           TA+ + G E     + ++++++G    GKT++L     G    +  PTV   + V     
Sbjct: 308 TASNSPGIEGLS-NKEMRILMLGLDAAGKTTILYKLKLGQSVTT-IPTVG--FNVETVTY 363

Query: 62  GKPVHLHIWDTAGQDDYDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEV-NHFCK 120
            K V  ++WD  GQD    L   +Y     L+   D    +  D      +  + +   +
Sbjct: 364 -KNVKFNVWDVGGQDKIRPLWRHYYTGTQGLIFVVDCADRDRIDEARQELHRIINDREMR 422

Query: 121 KVPIIVVGCKTDLCKDKSLVNKLRRNGLEPV 151
              I++   K DL           + GL  +
Sbjct: 423 DAIILIFANKQDLPDAMKPHEIQEKLGLTRI 453


>4YLG-A nrPDB
          Length = 173

 Score = 83.8 bits (206), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 33/164 (20%), Positives = 62/164 (37%), Gaps = 16/164 (9%)

Query: 14  GVRSVKVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMVNLQVKGKPVHLHIWDTA 73
           G + +++++VG    GKTS+L     G    +  PT+   + V   V+ K +   +WD  
Sbjct: 10  GKKEMRILMVGLDAAGKTSILYKLKLGEIVTT-IPTIG--FNVE-TVEYKNISFTVWDVG 65

Query: 74  GQDDYDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVNHFCKKVPIIVV-GCKTD 132
           GQD    L   +Y +   ++   D    +            +N    +  I++V   K D
Sbjct: 66  GQDKIRPLWRHYYQNTQAIIFVVDSNDRDRIGEAREELMKMLNEDEMRNAILLVFANKHD 125

Query: 133 LCKDKSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLH 176
           L +  S+     + GL+ +                Y + S   +
Sbjct: 126 LPQAMSISEVTEKLGLQTIK-----------NRKWYCQTSCATN 158


>2H16-A nrPDB
          Length = 183

 Score = 81.9 bits (201), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 27/148 (18%), Positives = 58/148 (39%), Gaps = 6/148 (4%)

Query: 10  EAPPGV-RSVKVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMVNLQVKGKPVHLH 68
             P G  +  KV++VG    GKT++L  F+      + +PT+    +  + +        
Sbjct: 14  LVPRGSHQEHKVIIVGLDNAGKTTILYQFSMNEVVHT-SPTIGSN-VEEIVINNT--RFL 69

Query: 69  IWDTAGQDDYDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVNHFC-KKVPIIVV 127
           +WD  GQ+        +Y +   +++  D T            Y  + H   +K  +++ 
Sbjct: 70  MWDIGGQESLRSSWNTYYTNTEFVIVVVDSTDRERISVTREELYKMLAHEDLRKAGLLIF 129

Query: 128 GCKTDLCKDKSLVNKLRRNGLEPVTYHR 155
             K D+ +  ++    +   L  +  H+
Sbjct: 130 ANKQDVKECMTVAEISQFLKLTSIKDHQ 157


>2A5F-A nrPDB
          Length = 175

 Score = 81.5 bits (200), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 29/139 (20%), Positives = 53/139 (38%), Gaps = 5/139 (3%)

Query: 14  GVRSVKVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMVNLQVKGKPVHLHIWDTA 73
           G + ++++++G    GKT++L     G    +  PTV   + V      K V  ++WD  
Sbjct: 10  GNKEMRILMLGLDAAGKTTILYKLKLGQSVTT-IPTVG--FNVETVTY-KNVKFNVWDVG 65

Query: 74  GQDDYDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEV-NHFCKKVPIIVVGCKTD 132
           GQD    L   +Y     L+   D    +  D      +  + +   +   I++   K D
Sbjct: 66  GQDKIRPLWRHYYTGTQGLIFVVDCADRDRIDEARQELHRIINDREMRDAIILIFANKQD 125

Query: 133 LCKDKSLVNKLRRNGLEPV 151
           L           + GL  +
Sbjct: 126 LPDAMKPHEIQEKLGLTRI 144


>1YZG-A nrPDB
          Length = 179

 Score = 79.9 bits (196), Expect = 8e-16,   Method: Composition-based stats.
 Identities = 28/140 (20%), Positives = 53/140 (37%), Gaps = 5/140 (3%)

Query: 16  RSVKVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMVNLQVKGKPVHLHIWDTAGQ 75
           +  KV++VG    GKT++L  F       + +PT+    +  + VK    H  +WD  GQ
Sbjct: 15  QEHKVIIVGLDNAGKTTILYQFLMNEVVHT-SPTIGSN-VEEIVVKNT--HFLMWDIGGQ 70

Query: 76  DDYDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVNHFC-KKVPIIVVGCKTDLC 134
           +        +Y +   ++L  D              Y  + H   +K  +++   K D+ 
Sbjct: 71  ESLRSSWNTYYSNTEFIILVVDSIDRERLAITKEELYRMLAHEDLRKAAVLIFANKQDMK 130

Query: 135 KDKSLVNKLRRNGLEPVTYH 154
              +     +   L  +  H
Sbjct: 131 GCMTAAEISKYLTLSSIKDH 150


>6BBQ-A nrPDB
          Length = 520

 Score = 79.2 bits (194), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 28/139 (20%), Positives = 52/139 (37%), Gaps = 5/139 (3%)

Query: 14  GVRSVKVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMVNLQVKGKPVHLHIWDTA 73
           G + ++++++G    GKT++L     G    +  PTV   + V      K V  ++WD  
Sbjct: 356 GNKEMRILMLGLDAAGKTTILYKLKLGQSVTT-IPTVG--FNVETVTY-KNVKFNVWDVG 411

Query: 74  GQDDYDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEV-NHFCKKVPIIVVGCKTD 132
           G D    L   +Y     L+   D    +  D      +  + +   +   I++   K D
Sbjct: 412 GLDKIRPLWRHYYTGTQGLIFVVDCADRDRIDEARQELHRIINDREMRDAIILIFANKQD 471

Query: 133 LCKDKSLVNKLRRNGLEPV 151
           L           + GL  +
Sbjct: 472 LPDAMKPHEIQEKLGLTRI 490


>1Z6X-A nrPDB
          Length = 180

 Score = 78.4 bits (192), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 26/138 (18%), Positives = 55/138 (39%), Gaps = 5/138 (3%)

Query: 14  GVRSVKVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMVNLQVKGKPVHLHIWDTA 73
           G + +++++VG    GKT++L     G    +  PT+   + V   V+ K +   +WD  
Sbjct: 14  GKKQMRILMVGLDAAGKTTILYKLKLGEIVTT-IPTIG--FNVE-TVEYKNICFTVWDVG 69

Query: 74  GQDDYDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPE-VNHFCKKVPIIVVGCKTD 132
           GQD    L   ++ +   L+   D         + +      +    +   +++   K D
Sbjct: 70  GQDRIRPLWKHYFQNTQGLIFVVDSNDRERIQEVADELQKMLLVDELRDAVLLLFANKQD 129

Query: 133 LCKDKSLVNKLRRNGLEP 150
           L    ++     + GL+ 
Sbjct: 130 LPNAMAISEMTDKLGLQS 147


>3O47-A nrPDB
          Length = 329

 Score = 78.4 bits (192), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 27/139 (19%), Positives = 52/139 (37%), Gaps = 5/139 (3%)

Query: 11  APPGVRSVKVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMVNLQVKGKPVHLHIW 70
              G + +++++VG    GKT++L     G    +  PT+   + V   V+ K +   +W
Sbjct: 159 GLFGKKEMRILMVGLDAAGKTTILYKLKLGEIVTT-IPTIG--FNVE-TVEYKNISFTVW 214

Query: 71  DTAGQDDYDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVNHFC-KKVPIIVVGC 129
           D  GQD    L   ++ +   L+   D       +         +     +   ++V   
Sbjct: 215 DVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERVNEAREELMRMLAEDELRDAVLLVFAN 274

Query: 130 KTDLCKDKSLVNKLRRNGL 148
           K DL    +      + GL
Sbjct: 275 KQDLPNAMNAAEITDKLGL 293


>5NZV-F nrPDB
          Length = 181

 Score = 78.0 bits (191), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 30/139 (21%), Positives = 55/139 (39%), Gaps = 5/139 (3%)

Query: 14  GVRSVKVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMVNLQVKGKPVHLHIWDTA 73
           G + +++++VG  G GKT++L     G    +  PT+   + V   V+ K +   +WD  
Sbjct: 14  GNKEMRILMVGLDGAGKTTVLYKLKLGEVITT-IPTIG--FNVE-TVQYKNISFTVWDVG 69

Query: 74  GQDDYDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVNHFC-KKVPIIVVGCKTD 132
           GQD    L   +Y +   ++   D    +            +N    +    +V   K D
Sbjct: 70  GQDRIRSLWRHYYRNTEGVIFVVDSNDRSRIGEAREVMQRMLNEDELRNAAWLVFANKQD 129

Query: 133 LCKDKSLVNKLRRNGLEPV 151
           L +  S      + GL  +
Sbjct: 130 LPEAMSAAEITEKLGLHSI 148


>3LRP-A nrPDB
          Length = 181

 Score = 77.6 bits (190), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 32/138 (23%), Positives = 55/138 (39%), Gaps = 5/138 (3%)

Query: 15  VRSVKVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMVNLQVKGKPVHLHIWDTAG 74
            + V++++VG    GKT++L     G    +  PT+   + V   V+ + +   +WD  G
Sbjct: 15  KKDVRILMVGLDAAGKTTILYKVKLGEVVTT-IPTIG--FNVE-TVEFRNISFTVWDVGG 70

Query: 75  QDDYDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVNHFCKKVPIIVV-GCKTDL 133
           QD    L   +Y +   L+   D       D+     +  +N    K  II+V   K DL
Sbjct: 71  QDKIRPLWRHYYSNTDGLIFVVDSNDRERIDDAREELHRMINEEELKDAIILVFANKQDL 130

Query: 134 CKDKSLVNKLRRNGLEPV 151
               S      +  L  +
Sbjct: 131 PNAMSAAEVTEKLHLNTI 148


>2B6H-A nrPDB
          Length = 192

 Score = 76.1 bits (186), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 26/137 (18%), Positives = 53/137 (38%), Gaps = 5/137 (3%)

Query: 14  GVRSVKVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMVNLQVKGKPVHLHIWDTA 73
           G + +++++VG    GKT++L     G    +  PT+   + V   V+ K +   +WD  
Sbjct: 26  GKKQMRILMVGLDAAGKTTILYKLKLGEIVTT-IPTIG--FNVE-TVEYKNICFTVWDVG 81

Query: 74  GQDDYDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVNHFC-KKVPIIVVGCKTD 132
           GQD    L   ++ +   L+   D           +     +     +   ++V   K D
Sbjct: 82  GQDKIRPLWRHYFQNTQGLIFVVDSNDRERVQESADELQKMLQEDELRDAVLLVFANKQD 141

Query: 133 LCKDKSLVNKLRRNGLE 149
           +     +     + GL+
Sbjct: 142 MPNAMPVSELTDKLGLQ 158


>6FAE-B nrPDB
          Length = 213

 Score = 75.7 bits (185), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 27/134 (20%), Positives = 52/134 (38%), Gaps = 5/134 (3%)

Query: 16  RSVKVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMVNLQVKGKPVHLHIWDTAGQ 75
           +S+++++VG    GKT++L     G    +  PT+   + V   V+ K +   +WD  GQ
Sbjct: 48  QSMRILMVGLDAAGKTTILYKLKLGEIVTT-IPTIG--FNVE-TVEYKNISFTVWDVGGQ 103

Query: 76  DDYDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVNHFC-KKVPIIVVGCKTDLC 134
           D    L   ++ +   L+   D       +         +     +   ++V   K DL 
Sbjct: 104 DKIRPLWRHYFQNTQGLIFVVDSNDRERVNEAREELMRMLAEDELRDAVLLVFANKQDLP 163

Query: 135 KDKSLVNKLRRNGL 148
              +      + GL
Sbjct: 164 NAMNAAEITDKLGL 177


>5UF8-A nrPDB
          Length = 181

 Score = 75.3 bits (184), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 27/139 (19%), Positives = 55/139 (39%), Gaps = 5/139 (3%)

Query: 14  GVRSVKVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMVNLQVKGKPVHLHIWDTA 73
           G + +++++VG    GKT++L     G    +  PT+   + V   V+ K +   +WD  
Sbjct: 14  GNKEMRILMVGLDAAGKTTILYKLKLGEIVTT-IPTIG--FNVE-TVEYKNISFTVWDVG 69

Query: 74  GQDDYDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVNHFCKKVPIIVV-GCKTD 132
           GQD    L   ++ +   ++   D    +            +N    +  +++V   K D
Sbjct: 70  GQDKIRPLWRYYFQNTQGIIFVVDSNDRDRIAEAREELQQMLNEDELRDALLLVFANKQD 129

Query: 133 LCKDKSLVNKLRRNGLEPV 151
           L    +      + GL  +
Sbjct: 130 LPNAMNAAEITEKLGLHSI 148


>3AQ4-A nrPDB
          Length = 184

 Score = 74.5 bits (182), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 27/136 (19%), Positives = 54/136 (39%), Gaps = 5/136 (3%)

Query: 14  GVRSVKVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMVNLQVKGKPVHLHIWDTA 73
             + +++++VG    GKT++L     G    +  PT+   + V   V+ K +   +WD  
Sbjct: 17  AKKEMRILMVGLDAAGKTTILYKLKLGEIVTT-IPTIG--FNVE-TVEYKNISFTVWDVG 72

Query: 74  GQDDYDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVNHFC-KKVPIIVVGCKTD 132
           GQD    L   ++ +   L+   D    +      +  +  +N    +   ++V   K D
Sbjct: 73  GQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQD 132

Query: 133 LCKDKSLVNKLRRNGL 148
           L    +      + GL
Sbjct: 133 LPNAMNAAEITDKLGL 148


>4ZI3-A nrPDB
          Length = 190

 Score = 74.5 bits (182), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 32/167 (19%), Positives = 55/167 (32%), Gaps = 15/167 (8%)

Query: 16  RSVKVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMVNLQVKGKPVHLHIWDTAGQ 75
           + V+++L+G    GKT+LL   A        TPT          V+ +   L++WD  GQ
Sbjct: 16  QEVRILLLGLDNAGKTTLLKQLAS-EDISHITPTQGFNIK---SVQSQGFKLNVWDIGGQ 71

Query: 76  DDYDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVNHFCKK-VPIIVVGCKTDLC 134
                    ++ +  +L+   D      F+         +       VP+++   K DL 
Sbjct: 72  RKIRPYWRSYFENTDILIYVIDSADRKRFEETGQELTELLEEEKLSCVPVLIFANKQDLL 131

Query: 135 KDKSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNVHA 181
                        L  +           V  +    CSA   + V  
Sbjct: 132 TAAPASEIAEGLNLHTI--------RDRVWQIQ--SCSALTGEGVQD 168


>6DFF-C nrPDB
          Length = 193

 Score = 72.6 bits (177), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 25/133 (18%), Positives = 49/133 (36%), Gaps = 5/133 (3%)

Query: 17  SVKVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMVNLQVKGKPVHLHIWDTAGQD 76
            +++++VG    GKT++L     G    +  PT+   + V   V+ K +   +WD  G D
Sbjct: 29  EMRILMVGLDAAGKTTILYKLKLGEIVTT-IPTIG--FNVE-TVEYKNISFTVWDVGGLD 84

Query: 77  DYDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVNHFC-KKVPIIVVGCKTDLCK 135
               L   ++ +   L+   D       +         +     +   ++V   K DL  
Sbjct: 85  KIRPLWRHYFQNTQGLIFVVDSNDRERVNEAREELMRMLAEDELRDAVLLVFANKQDLPN 144

Query: 136 DKSLVNKLRRNGL 148
             +      + GL
Sbjct: 145 AMNAAEITDKLGL 157


>5EE5-B nrPDB
          Length = 171

 Score = 72.6 bits (177), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 28/180 (15%), Positives = 59/180 (32%), Gaps = 15/180 (8%)

Query: 16  RSVKVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMVNLQVKGKPVHLHIWDTAGQ 75
           R ++++++G  G GKT++L     G    +  PT+   + V      K +   +WD  G 
Sbjct: 6   REMRILILGLDGAGKTTILYRLQVGEVVTT-IPTIG--FNVETVTY-KNLKFQVWDLGGL 61

Query: 76  DDYDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVNHFCKKVPIIVV-GCKTDLC 134
                    +Y +   ++   D    +      +     +     +  I+VV   K D+ 
Sbjct: 62  TSIRPYWRCYYSNTDAVIYVVDSCDRDRIGISKSELVAMLEEEELRKAILVVFANKQDME 121

Query: 135 KDKSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNVHAVFQEAAEVALSSR 194
           +  +        GL          +      +   + SA     +    +   E   S +
Sbjct: 122 QAMTSSEMANSLGLP--------ALKDRKWQI--FKTSATKGTGLDEAMEWLVETLKSRQ 171


>1J2J-A nrPDB
          Length = 166

 Score = 72.2 bits (176), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 26/133 (19%), Positives = 50/133 (37%), Gaps = 5/133 (3%)

Query: 17  SVKVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMVNLQVKGKPVHLHIWDTAGQD 76
           S+++++VG    GKT++L     G    +  PT+   + V   V+ K +   +WD  G D
Sbjct: 2   SMRILMVGLDAAGKTTILYKLKLGEIVTT-IPTIG--FNVE-TVEYKNISFTVWDVGGLD 57

Query: 77  DYDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVNHFC-KKVPIIVVGCKTDLCK 135
               L   ++ +   L+   D       +         +     +   ++V   K DL  
Sbjct: 58  KIRPLWRHYFQNTQGLIFVVDSNDRERVNEAREELMRMLAEDELRDAVLLVFANKQDLPN 117

Query: 136 DKSLVNKLRRNGL 148
             +      + GL
Sbjct: 118 AMNAAEITDKLGL 130


>3BH6-A nrPDB
          Length = 164

 Score = 71.5 bits (174), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 32/169 (18%), Positives = 54/169 (31%), Gaps = 15/169 (8%)

Query: 14  GVRSVKVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMVNLQVKGKPVHLHIWDTA 73
           G   V+++L+G    GKT+LL   A        TPT          V+ +   L++WD  
Sbjct: 1   GGSEVRILLLGLDNAGKTTLLKQLAS-EDISHITPTQGFNIK---SVQSQGFKLNVWDIG 56

Query: 74  GQDDYDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVNHFCKK-VPIIVVGCKTD 132
           G          ++ +  +L+   D      F+         +       VP+++   K D
Sbjct: 57  GLRKIRPYWRSYFENTDILIYVIDSADRKRFEETGQELTELLEEEKLSCVPVLIFANKQD 116

Query: 133 LCKDKSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNVHA 181
           L              L  +           V  +    CSA   + V  
Sbjct: 117 LLTAAPASEIAEGLNLHTI--------RDRVWQIQ--SCSALTGEGVQD 155


>2H57-A nrPDB
          Length = 190

 Score = 69.5 bits (169), Expect = 9e-13,   Method: Composition-based stats.
 Identities = 31/151 (20%), Positives = 59/151 (39%), Gaps = 15/151 (9%)

Query: 10  EAPPGVRSVKVVLVGDGGCGKTSLLMVFA-DGAFPESYTPTVFERYMVNLQVKGKPVHLH 68
             P G + V V+ +G    GKT+++       A  ++  PT+          K   +   
Sbjct: 14  LVPRGSKEVHVLCLGLDNSGKTTIINKLKPSNAQSQNILPTIGFSIEK---FKSSSLSFT 70

Query: 69  IWDTAGQDDYDRLRPLFYPDASVLLLCFDVTSP-------NSFDNIFNRWYPEVNHFCKK 121
           ++D +GQ  Y  L   +Y +   ++   D +            D + N   P++ H  ++
Sbjct: 71  VFDMSGQGRYRNLWEHYYKEGQAIIFVIDSSDRLRMVVAKEELDTLLNH--PDIKH--RR 126

Query: 122 VPIIVVGCKTDLCKDKSLVNKLRRNGLEPVT 152
           +PI+    K DL    + V   +   LE + 
Sbjct: 127 IPILFFANKMDLRDAVTSVKVSQLLCLENIK 157


>1MOZ-A nrPDB
          Length = 183

 Score = 68.4 bits (166), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 23/118 (19%), Positives = 49/118 (41%), Gaps = 5/118 (4%)

Query: 16  RSVKVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMVNLQVKGKPVHLHIWDTAGQ 75
           + ++++++G  G GKT++L     G    +  PT+   + V   +  K + L++WD  GQ
Sbjct: 17  KELRILILGLDGAGKTTILYRLQIGEVVTT-KPTIG--FNVE-TLSYKNLKLNVWDLGGQ 72

Query: 76  DDYDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVNHFC-KKVPIIVVGCKTD 132
                    +Y D + ++   D T  +         +  +     +   ++V   K D
Sbjct: 73  TSIRPYWRCYYADTAAVIFVVDSTDKDRMSTASKELHLMLQEEELQDAALLVFANKQD 130


>1KSG-A nrPDB
          Length = 186

 Score = 67.6 bits (164), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 21/119 (17%), Positives = 46/119 (38%), Gaps = 5/119 (4%)

Query: 16  RSVKVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMVNLQVKGKPVHLHIWDTAGQ 75
           R ++++++G    GKT++L  F +G   ++ +PT+         ++ +   L+IWD  GQ
Sbjct: 17  RELRLLMLGLDNAGKTTILKKF-NGEDVDTISPTLGFNIK---TLEHRGFKLNIWDVGGQ 72

Query: 76  DDYDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEV-NHFCKKVPIIVVGCKTDL 133
                    ++     L+   D        +        +         +++   K DL
Sbjct: 73  KSLRSYWRNYFESTDGLIWVVDSADRQRMQDCQRELQSLLVEERLAGATLLIFANKQDL 131


>4V0N-A nrPDB
          Length = 169

 Score = 64.9 bits (157), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 32/142 (22%), Positives = 55/142 (38%), Gaps = 5/142 (3%)

Query: 13  PGVRSVKVVLVGDGGCGKTSLLMVFA-DGAFPESYTPTVFERYMVNLQVKGKPVHLHIWD 71
              + V V++VG    GKT+++              PTV   + V+   KG P+   ++D
Sbjct: 2   AASKKVNVLVVGLDNSGKTTIIERLKPRPRQAAEVAPTVG--FTVDEVEKG-PLTFTVFD 58

Query: 72  TAGQDDYDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVNHFC-KKVPIIVVGCK 130
            +G   Y  L   +Y +A  ++   D           +     + H   +KVPI+    K
Sbjct: 59  MSGAGRYRTLWEQYYREADAVVFVVDSADKLRMVVARDEMEHMLKHSNMRKVPILYFANK 118

Query: 131 TDLCKDKSLVNKLRRNGLEPVT 152
            DL      V   +  GL+ + 
Sbjct: 119 KDLPVAMPPVEIAQALGLDDIK 140


>5DE3-A nrPDB
          Length = 169

 Score = 60.7 bits (146), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 30/164 (18%), Positives = 53/164 (32%), Gaps = 15/164 (9%)

Query: 19  KVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMVNLQVKGKPVHLHIWDTAGQDDY 78
           +++++G    GKT++L   ++     + TPT     + +L   G   +L IWD  GQ   
Sbjct: 2   RILVLGLDNAGKTTILKALSE-EDITTITPTQGFN-IKSLSRDG--FNLKIWDIGGQKSI 57

Query: 79  DRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVNHFC-KKVPIIVVGCKTDLCKDK 137
                 ++     L+   D                 +       VP++V   K DL    
Sbjct: 58  RPYWRNYFDQTDALIYVIDSADSKRLSESEFELTELLQEEKMTGVPLLVFANKQDLVGAL 117

Query: 138 SLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNVHA 181
           +         L  +     Q  A          CSA+    +  
Sbjct: 118 AADEIASTLDLTSIRDRPWQIQA----------CSAKQGTGLKE 151


>2X77-A nrPDB
          Length = 189

 Score = 59.5 bits (143), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 27/141 (19%), Positives = 53/141 (37%), Gaps = 5/141 (3%)

Query: 12  PPGVRSVKVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMVNLQVKGKPVHLHIWD 71
            P  R ++V+++G    GKTS+L     G        TV    +    ++ K +   +WD
Sbjct: 17  LPADRKIRVLMLGLDNAGKTSILYRLHLG----DVVTTVPTVGVNLETLQYKNISFEVWD 72

Query: 72  TAGQDDYDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVNHFC-KKVPIIVVGCK 130
             GQ         ++ D   ++   D T  +      +  Y  ++    +K  +++   K
Sbjct: 73  LGGQTGVRPYWRCYFSDTDAVIYVVDSTDRDRMGVAKHELYALLDEDELRKSLLLIFANK 132

Query: 131 TDLCKDKSLVNKLRRNGLEPV 151
            DL    S      + G+  +
Sbjct: 133 QDLPDAASEAEIAEQLGVSSI 153


>4ARZ-A nrPDB
          Length = 310

 Score = 58.0 bits (139), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 31/155 (20%), Positives = 60/155 (38%), Gaps = 24/155 (15%)

Query: 19  KVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMVNLQVKGKPVH--------LHIW 70
           K++L+G  G GK+S+           +Y+   F+   +   +  +  H        L++W
Sbjct: 8   KLLLMGRSGSGKSSM-----RSIIFSNYSA--FDTRRLGATIDVEHSHLRFLGNMTLNLW 60

Query: 71  DTAGQD-----DYDRLRPLFYPDASVLLLCFDVTSPNSFDN--IFNRWYPEVNHFCKKVP 123
           D  GQD      + + +   +    VL+  FDV S     +  IF +   ++  +     
Sbjct: 61  DCGGQDVFMENYFTKQKDHIFQMVQVLIHVFDVESTEVLKDIEIFAKALKQLRKYSPDAK 120

Query: 124 IIVVGCKTDLC--KDKSLVNKLRRNGLEPVTYHRG 156
           I V+  K DL     +  + ++    L   +   G
Sbjct: 121 IFVLLHKMDLVQLDKREELFQIMMKNLSETSSEFG 155


>2GJ9-A nrPDB
          Length = 172

 Score = 58.0 bits (139), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 37/154 (24%), Positives = 61/154 (39%), Gaps = 13/154 (8%)

Query: 14  GVRSVKVVLVGDGGCGKTSLLMVFADGA--FPESYTPTVFERYMVNLQVKGKPVHLHIWD 71
           G   +KVV+ G    GK+SLL   A            T  +    ++ + G P  LHI D
Sbjct: 1   GSHGMKVVIAGRPNAGKSSLLNALAGREAAIVTDIAGTTRDVLREHIHIDGMP--LHIID 58

Query: 72  TAGQ-------DDYDRLRP-LFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVNHFCKKVP 123
           TAG        +     R       A  +L   D T+ ++ D     W   +     K+P
Sbjct: 59  TAGLREASDEVERIGIERAWQEIEQADRVLFMVDGTTTDAVDPA-EIWPEFIARLPAKLP 117

Query: 124 IIVVGCKTDLCKDKSLVNKLRRNGLEPVTYHRGQ 157
           I VV  K D+  +   ++++  + L  ++   G+
Sbjct: 118 ITVVRNKADITGETLGMSEVNGHALIRLSARTGE 151


>6CES-A nrPDB
          Length = 313

 Score = 57.6 bits (138), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 35/151 (23%), Positives = 57/151 (37%), Gaps = 24/151 (15%)

Query: 19  KVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMVNLQVKGKPVH------LHIWDT 72
           KV+L+G  G GKTS+           +Y      R    + V+   V       L++WD 
Sbjct: 9   KVLLMGKSGSGKTSM-----RSIIFANYIARDTRRLGATIDVEHSHVRFLGNLVLNLWDC 63

Query: 73  AGQDD-----YDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVNHFCKKVP---- 123
            GQD      +   R   + +  VL+  FDV S    +   + +   +    +  P    
Sbjct: 64  GGQDTFMENYFTSQRDNIFRNVEVLIYVFDVESRE-LEKDMHYYQSCLEAILQNSPDAKI 122

Query: 124 IIVVGCKTDL--CKDKSLVNKLRRNGLEPVT 152
             +V  K DL     + L+ K R   L  ++
Sbjct: 123 FCLV-HKMDLVQEDQRDLIFKEREEDLRRLS 152


>2GAO-A nrPDB
          Length = 208

 Score = 57.2 bits (137), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 33/174 (18%), Positives = 63/174 (36%), Gaps = 9/174 (5%)

Query: 15  VRSVKVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMVNLQVKGKPVHLHIWDTAG 74
            +S K+V +G    GKT+LL +  D    + + PT+   +  + ++    +    +D  G
Sbjct: 33  KKSGKLVFLGLDNAGKTTLLHMLKDDRLGQ-HVPTL---HPTSEELTIAGMTFTTFDLGG 88

Query: 75  QDDYDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRW-YPEVNHFCKKVPIIVVGCKTDL 133
            +   R+   + P  + ++   D    +              +     VPI+++G K D 
Sbjct: 89  HEQARRVWKNYLPAINGIVFLVDCADHSRLVESKVELNALMTDETISNVPILILGNKIDR 148

Query: 134 CKDKSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLE---CSARLHDNVHAVFQ 184
               S        GL   T  +G    + + A   +E   CS          F+
Sbjct: 149 TDAISEEKLREIFGLYGQTTGKGNVTLKELNARP-MEVFMCSVLKRQGYGEGFR 201


>2YWH-A nrPDB
          Length = 600

 Score = 56.8 bits (136), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 28/187 (14%), Positives = 48/187 (25%), Gaps = 35/187 (18%)

Query: 29  GKTSLLMVFAD-------GAFPESYTPTVFERYMVNLQV------------KGKPVHLHI 69
           GK++L     +           E    T+       + V             G    LH+
Sbjct: 18  GKSTLADRLLEYTGAISEREKREQLLDTLDVERERGITVKMQAVRMFYKAKDGNTYKLHL 77

Query: 70  WDTAGQDDYDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVNHFCKKVPIIVVGC 129
            DT G  D+              LL  D +       + N W        + + II V  
Sbjct: 78  IDTPGHVDFSYEVSRALAACEGALLLIDASQGIEAQTVANFW----KAVEQDLVIIPVIN 133

Query: 130 KTDLCKDKSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNVHAVFQEAAEV 189
           K DL        K +   +  +                 +  SA+    +  + +     
Sbjct: 134 KIDLPSADVDRVKKQIEEVLGLDPEEA------------ILASAKEGIGIEEILEAIVNR 181

Query: 190 ALSSRGR 196
               +G 
Sbjct: 182 IPPPKGD 188


>3GEH-A nrPDB
          Length = 462

 Score = 56.0 bits (134), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 40/159 (25%), Positives = 63/159 (39%), Gaps = 21/159 (13%)

Query: 3   AAQAAGEEAPPGVRSVKVVLVGDGGCGKTSLLMVFA--DGAFPESYTPTVFERYMVNLQV 60
           A +  GE    G   +KV +VG    GK+SLL  ++  D A       T  +     L V
Sbjct: 213 ATKDKGELLRTG---LKVAIVGRPNVGKSSLLNAWSQSDRAIVTDLPGTTRDVVESQLVV 269

Query: 61  KGKPVHLHIWDTAG------Q-DDYDRLRPLFYPD-ASVLLLCFDVTSPNSFDNIFNRWY 112
            G PV   + DTAG      Q +     R     + A ++LL  D  +  +        Y
Sbjct: 270 GGIPV--QVLDTAGIRETSDQVEKIGVERSRQAANTADLVLLTIDAATGWT--TGDQEIY 325

Query: 113 PEVNHFCKKVPIIVVGCKTDLCKDKSLVNKLRRNGLEPV 151
            +V H     P+I+V  K DL + + + +      +  +
Sbjct: 326 EQVKHR----PLILVMNKIDLVEKQLITSLEYPENITQI 360


>6GNI-B nrPDB
          Length = 167

 Score = 55.3 bits (132), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 30/145 (20%), Positives = 52/145 (35%), Gaps = 19/145 (13%)

Query: 19  KVVLVGDGGCGKTSLLMVFADGAFP---ESYTPTVFERYMVNLQVKGKPVHLHIWDTAGQ 75
           K++ +G    GKT+LL +  +        ++ PT  E  + N       +    +D  G 
Sbjct: 3   KLLFLGLDNAGKTTLLHMLKNDRLATLQPTWHPTSEELAIGN-------IKFTTFDLGGH 55

Query: 76  DDYDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRW-----YPEVNHFCKKVPIIVVGCK 130
               RL   ++P+ + ++   D   P  FD             E+      VP +++G K
Sbjct: 56  IQARRLWKDYFPEVNGIVFLVDAADPERFDEARVELDALFNIAELK----DVPFVILGNK 111

Query: 131 TDLCKDKSLVNKLRRNGLEPVTYHR 155
            D     S        GL   T  +
Sbjct: 112 IDAPNAVSEAELRSALGLLNTTGSQ 136


>1M2O-B nrPDB
          Length = 190

 Score = 55.3 bits (132), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 30/145 (20%), Positives = 52/145 (35%), Gaps = 19/145 (13%)

Query: 19  KVVLVGDGGCGKTSLLMVFADGAFP---ESYTPTVFERYMVNLQVKGKPVHLHIWDTAGQ 75
           K++ +G    GKT+LL +  +        ++ PT  E  + N       +    +D  G 
Sbjct: 25  KLLFLGLDNAGKTTLLHMLKNDRLATLQPTWHPTSEELAIGN-------IKFTTFDLGGH 77

Query: 76  DDYDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRW-----YPEVNHFCKKVPIIVVGCK 130
               RL   ++P+ + ++   D   P  FD             E+      VP +++G K
Sbjct: 78  IQARRLWKDYFPEVNGIVFLVDAADPERFDEARVELDALFNIAELK----DVPFVILGNK 133

Query: 131 TDLCKDKSLVNKLRRNGLEPVTYHR 155
            D     S        GL   T  +
Sbjct: 134 IDAPNAVSEAELRSALGLLNTTGSQ 158


>1XZP-A nrPDB
          Length = 482

 Score = 53.7 bits (128), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 34/218 (15%), Positives = 75/218 (34%), Gaps = 33/218 (15%)

Query: 1   MTAAQAAGEEAPPGVRSVKVVLVGDGGCGKTSLLMVFA--DGAFPESYTPTVFERYMVNL 58
           +T      +      R +++V+VG    GK++LL      D A       T  +     +
Sbjct: 227 LTEELKKADAGILLNRGLRMVIVGKPNVGKSTLLNRLLNEDRAIVTDIPGTTRDVISEEI 286

Query: 59  QVKGKPVHLHIWDTAG--------QDDYDRLRPLF-YPDASVLLLCFDVTSPNSFDNIFN 109
            ++G  +   I DTAG         +     R L     A ++L   D +SP   ++   
Sbjct: 287 VIRG--ILFRIVDTAGVRSETNDLVERLGIERTLQEIEKADIVLFVLDASSPLDEED--R 342

Query: 110 RWYPEVNHFCKKVPIIVVGCKTD----LCKDKSLVNKLRRNGLEPVTYHRGQEMARSVGA 165
           +    +         +VV  K D    + +++          +  ++  +G+ +   +  
Sbjct: 343 KILERIK----NKRYLVVINKVDVVEKINEEEIKNKLGTDRHMVKISALKGEGL-EKLEE 397

Query: 166 VAYLECSARLHDNVHAVFQEAAE-VALSSRGRNFWRRI 202
             Y E           +F+  ++ +  + R +     +
Sbjct: 398 SIYRET--------QEIFERGSDSLITNLRQKQLLENV 427


>1F6B-A nrPDB
          Length = 198

 Score = 53.4 bits (127), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 32/176 (18%), Positives = 62/176 (35%), Gaps = 9/176 (5%)

Query: 19  KVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMVNLQVKGKPVHLHIWDTAGQDDY 78
           K+V +G    GKT+LL +  D    + + PT+   +  + ++    +    +D  G    
Sbjct: 27  KLVFLGLDNAGKTTLLHMLKDDRLGQ-HVPTL---HPTSEELTIAGMTFTTFDLGGHIQA 82

Query: 79  DRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRW-YPEVNHFCKKVPIIVVGCKTDLCKDK 137
            R+   + P  + ++   D                   +     VPI+++G K D  +  
Sbjct: 83  RRVWKNYLPAINGIVFLVDCADHERLLESKEELDSLMTDETIANVPILILGNKIDRPEAI 142

Query: 138 SLVNKLRRNGLEPVTYHRGQEMARSVGAVA---YLECSARLHDNVHAVFQEAAEVA 190
           S        GL   T  +G    + + A     ++ CS          F+  A+  
Sbjct: 143 SEERLREMFGLYGQTTGKGSVSLKELNARPLEVFM-CSVLKRQGYGEGFRWMAQYI 197


>3J8G-X nrPDB
          Length = 490

 Score = 53.0 bits (126), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 33/193 (17%), Positives = 60/193 (31%), Gaps = 35/193 (18%)

Query: 13  PGVRSVKVVLVGDGGCGKTSLLMVFADGAFPESYT--PTVFERYMVNLQVKGKPVHLHIW 70
           P    +K+ +VG    GK++L            Y    T  +   + ++  G+   L   
Sbjct: 198 PQSLPIKLAIVGRPNVGKSTLTNRILGEERVVVYDMPGTTRDSIYIPMERDGREYVLI-- 255

Query: 71  DTAGQDDYDRLRPL-----------FYPDASVLLLCFDVTSPNSFDNIFNRWYPEVNHFC 119
           DTAG     ++                 DA+V++L  D     S  ++            
Sbjct: 256 DTAGVRKRGKITDAVEKFSVIKTLQAIEDANVVMLVIDAREGISDQDLS---LLGFILNS 312

Query: 120 KKVPIIVVGCKTDLCKDKSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLE---CSARLH 176
            +  +IVV  K D                + V     + +   +G + +      SA   
Sbjct: 313 GRSLVIVV-NKWD-------------GLSQEVKEQVKETLDFRLGFIDFARVHFISALHG 358

Query: 177 DNVHAVFQEAAEV 189
             V  +F+   E 
Sbjct: 359 SGVGNLFESVREA 371



 Score = 36.8 bits (84), Expect = 0.006,   Method: Composition-based stats.
 Identities = 27/142 (19%), Positives = 41/142 (28%), Gaps = 16/142 (11%)

Query: 20  VVLVGDGGCGKTSLLMVF--ADGAFPESYTPTVFERYMVNLQVKGKPVHLHIWDTAG--- 74
           V LVG    GK++L         A    +     +R     +++G+       DT G   
Sbjct: 5   VALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGRAEIEGRE--FICIDTGGIDG 62

Query: 75  -----QDDYDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVNHFCKKVPIIVVGC 129
                +        L   +A V+L   D                 +    K  P  +V  
Sbjct: 63  TEDGVETRMAEQSLLAIEEADVVLFMVDA--RAGLMPADEAIAKHLRSREK--PTFLVAN 118

Query: 130 KTDLCKDKSLVNKLRRNGLEPV 151
           KTD       V      GL  +
Sbjct: 119 KTDGLDPDQAVVDFYSLGLGEI 140


>5DI3-B nrPDB
          Length = 263

 Score = 52.2 bits (124), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 27/122 (22%), Positives = 45/122 (36%), Gaps = 7/122 (5%)

Query: 14  GVRSVKVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMVNLQVKGKPVHLHIWDTA 73
           G R + + L+G    GKT+LL     G      TPT       +  +      + ++D  
Sbjct: 1   GPRKITIALLGLDNAGKTTLLNS-IQGEVDRDTTPTFGFN---STTLNEGKYKIEVFDLG 56

Query: 74  GQDDYDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEV--NHFCKKVPIIVVGCKT 131
           G  +   +   +  +   ++   D   P  F+        EV  N F +  PI +   K 
Sbjct: 57  GGKNIRGVWKKYLAEVHAIVYVVDAADPGRFEE-SKMTMAEVLENQFMRDKPICIFANKQ 115

Query: 132 DL 133
           DL
Sbjct: 116 DL 117


>4M9Q-A nrPDB
          Length = 227

 Score = 52.2 bits (124), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 27/122 (22%), Positives = 45/122 (36%), Gaps = 7/122 (5%)

Query: 14  GVRSVKVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMVNLQVKGKPVHLHIWDTA 73
           G R + + L+G    GKT+LL     G      TPT       +  +      + ++D  
Sbjct: 1   GPRKITIALLGLDNAGKTTLLNS-IQGEVDRDTTPTFGFN---STTLNEGKYKIEVFDLG 56

Query: 74  GQDDYDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEV--NHFCKKVPIIVVGCKT 131
           G  +   +   +  +   ++   D   P  F+        EV  N F +  PI +   K 
Sbjct: 57  GGKNIRGVWKKYLAEVHAIVYVVDAADPGRFEE-SKMTMAEVLENQFMRDKPICIFANKQ 115

Query: 132 DL 133
           DL
Sbjct: 116 DL 117


>6G79-A nrPDB
          Length = 225

 Score = 51.8 bits (123), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 40/207 (19%), Positives = 72/207 (34%), Gaps = 27/207 (13%)

Query: 9   EEAPPGVRSVKVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMVNLQVKGKPVHLH 68
           E+     + VK++L+G    GK++++              +     +V      K +H  
Sbjct: 22  EDGISAAKDVKLLLLGADNSGKSTIVKQM--KIIHGGSGGSGGTTGIVETHFTFKNLHFR 79

Query: 69  IWDTAGQDDYDRLRPLFYPDASVLLLCFDVTS----PNS---FDNIFNRWYPEVNHFCKK 121
           ++D  GQ    +     + D + ++ C D++       S   FD+I N      N F   
Sbjct: 80  LFDVGGQRSERKKWIHCFEDVTAIIFCVDLSDYNRMHESLMLFDSICN------NKFFID 133

Query: 122 VPIIVVGCKTDLCKDKSLVNKLR---RNGLEPVTYHRGQEM--------ARSVGAVAYLE 170
             II+   K DL  +K   + L         P TY               RS     Y  
Sbjct: 134 TSIILFLNKKDLFGEKIKKSPLTICFPEYTGPNTYEDAAAYIQAQFESKNRSPNKEIYCH 193

Query: 171 -CSARLHDNVHAVFQEAAEVALSSRGR 196
              A   +N   +F    ++ +++  R
Sbjct: 194 MTCATDTNNAQVIFDAVTDIIIANNLR 220


>2LKD-A nrPDB
          Length = 178

 Score = 51.0 bits (121), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 31/174 (17%), Positives = 54/174 (31%), Gaps = 26/174 (14%)

Query: 20  VVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMV-NLQVKGKPVHLHIWDTAGQDDY 78
           V ++G    GKT+LL         E     + +      + V  K +     DT G + +
Sbjct: 11  VTIMGHVDHGKTTLLDAIRHSKVTEQEAGGITQHIGAYQVTVNDKKITF--LDTPGHEAF 68

Query: 79  DRLRPLFYPDASV---LLLCFDVTS---PNSFDNIFNRWYPEVNHFCKKVPIIVVGCKTD 132
             +R      A V   ++L         P + + I +            VPIIV   K D
Sbjct: 69  TTMRA---RGAQVTDIVILVVAADDGVMPQTVEAINH-------AKAANVPIIVAINKMD 118

Query: 133 LCKDKSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNVHAVFQEA 186
             +               V    G       G   + + SA+  + +  + +  
Sbjct: 119 KPEANPDRVMQELMEYNLVPEEWG-------GDTIFCKLSAKTKEGLDHLLEMI 165


>5IMR-C nrPDB
          Length = 610

 Score = 51.0 bits (121), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 25/187 (13%), Positives = 53/187 (28%), Gaps = 35/187 (18%)

Query: 29  GKTSLLMVFA-------DGAFPESYTPTVFERYMVNLQV------------KGKPVHLHI 69
           GK++L            D    E +  ++       + +             G+    H+
Sbjct: 21  GKSTLADRILELTHAVSDREMREQFLDSLELERERGITIKASAVRVTYRAKDGEEYVFHL 80

Query: 70  WDTAGQDDYDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVNHFCKKVPIIVVGC 129
            DT G  D+             +LL  D +     + +   +   + H    +P+I    
Sbjct: 81  IDTPGHVDFTYEVSRALAAVEGVLLVVDASQGVEAETLAKFYMA-LEHGHVIIPVI---N 136

Query: 130 KTDLCKDKSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNVHAVFQEAAEV 189
           K DL   + L   L    +  +                 +  S +  + V  + +   + 
Sbjct: 137 KIDLPNARPLEVALEVEEVLGLPADEA------------IFASGKTGEGVEEILEAIVQR 184

Query: 190 ALSSRGR 196
               +G 
Sbjct: 185 IPPPKGD 191


>5J8B-z nrPDB
          Length = 679

 Score = 51.0 bits (121), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 25/187 (13%), Positives = 53/187 (28%), Gaps = 35/187 (18%)

Query: 29  GKTSLLMVFA-------DGAFPESYTPTVFERYMVNLQV------------KGKPVHLHI 69
           GK++L            D    E +  ++       + +             G+    H+
Sbjct: 90  GKSTLADRILELTHAVSDREMREQFLDSLELERERGITIKASAVRVTYRAKDGEEYVFHL 149

Query: 70  WDTAGQDDYDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVNHFCKKVPIIVVGC 129
            DT G  D+             +LL  D +     + +   +   + H    +P+I    
Sbjct: 150 IDTPGHVDFTYEVSRALAAVEGVLLVVDASQGVEAETLAKFYMA-LEHGHVIIPVI---N 205

Query: 130 KTDLCKDKSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNVHAVFQEAAEV 189
           K DL   + L   L    +  +                 +  S +  + V  + +   + 
Sbjct: 206 KIDLPNARPLEVALEVEEVLGLPADEA------------IFASGKTGEGVEEILEAIVQR 253

Query: 190 ALSSRGR 196
               +G 
Sbjct: 254 IPPPKGD 260


>4BAS-A nrPDB
          Length = 199

 Score = 50.7 bits (120), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 24/136 (17%), Positives = 45/136 (33%), Gaps = 12/136 (8%)

Query: 15  VRSVKVVLVGDGGCGKTSLLMVFADGAFPESYTP-TVFERYMVNLQVKGKPVHLHIWDTA 73
              ++VV+ G    GKT+++           +   TV   Y V    KG  V   ++D  
Sbjct: 15  KTKLQVVMCGLDNSGKTTIINQVKPAQSSSKHITATVG--YNVETFEKG-RVAFTVFDMG 71

Query: 74  GQDDYDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVNHF--------CKKVPII 125
           G   +  L   +Y +   ++   D +       + +     + H           +VP +
Sbjct: 72  GAKKFRGLWETYYDNIDAVIFVVDSSDHLRLCVVKSEIQAMLKHEDIRRELPGGGRVPFL 131

Query: 126 VVGCKTDLCKDKSLVN 141
               K D    K+   
Sbjct: 132 FFANKMDAAGAKTAAE 147


>5KU1-A nrPDB
          Length = 424

 Score = 50.3 bits (119), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 25/139 (17%), Positives = 51/139 (36%), Gaps = 15/139 (10%)

Query: 18  VKVVLVGDGGCGKT----SLLMVFA--DGAFPESYTPTVFERYMVNLQVKGKPVHLHIWD 71
            +  ++G   CGK+    +LL           E +           + V G+  +L + D
Sbjct: 243 FRCNVIGVKNCGKSGVLQALLGRNLMRQKKIREDHKSYYAIN---TVYVYGQEKYLLLHD 299

Query: 72  TAGQDDYDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVNHFCKKVPIIVVGCKT 131
            +  +    L         V+ L +DV++P SF+     +         ++P ++V  K+
Sbjct: 300 ISESE---FLTEAEII-CDVVCLVYDVSNPKSFEYCARIFKQHF--MDSRIPCLIVAAKS 353

Query: 132 DLCKDKSLVNKLRRNGLEP 150
           DL + K   +    +    
Sbjct: 354 DLHEVKQEYSISPTDFCRK 372


>5KSO-A nrPDB
          Length = 190

 Score = 50.3 bits (119), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 25/139 (17%), Positives = 51/139 (36%), Gaps = 15/139 (10%)

Query: 18  VKVVLVGDGGCGKT----SLLMVFA--DGAFPESYTPTVFERYMVNLQVKGKPVHLHIWD 71
            +  ++G   CGK+    +LL           E +           + V G+  +L + D
Sbjct: 9   FRCNVIGVKNCGKSGVLQALLGRNLMRQKKIREDHKSYYAIN---TVYVYGQEKYLLLHD 65

Query: 72  TAGQDDYDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVNHFCKKVPIIVVGCKT 131
            +  +    L         V+ L +DV++P SF+     +         ++P ++V  K+
Sbjct: 66  ISESE---FLTEAEII-CDVVCLVYDVSNPKSFEYCARIFKQHF--MDSRIPCLIVAAKS 119

Query: 132 DLCKDKSLVNKLRRNGLEP 150
           DL + K   +    +    
Sbjct: 120 DLHEVKQEYSISPTDFCRK 138


>3T1O-A nrPDB
          Length = 198

 Score = 50.3 bits (119), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 39/194 (20%), Positives = 64/194 (32%), Gaps = 33/194 (17%)

Query: 18  VKVVLVGDGGCGKTS-LLMVFAD------GAFP----ESYTPTVFERYMVNL-QVKGKPV 65
            K+V  G G  GKT+ L  +++       G       E      F+   +++ +VKG   
Sbjct: 15  FKIVYYGPGLSGKTTNLKWIYSKVPEGRKGEMVSLATEDERTLFFDFLPLDIGEVKGFKT 74

Query: 66  HLHIWDTAGQDDYDRLRPLFYPDASVLLLCFDVT------SPNSFDNIFNRWYPEVNHFC 119
             H++   GQ  Y+  R L       ++   D        +  S  N+      E     
Sbjct: 75  RFHLYTVPGQVFYNASRKLILRGVDGIVFVADSAPNRLRANAESMRNMREN-LAEYGLTL 133

Query: 120 KKVPIIVVGCKTDLCKDKSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNV 179
             VPI++   K DL         L    +  V    G+           LE  A     V
Sbjct: 134 DDVPIVIQVNKRDLPDA------LPVEMVRAVVDPEGK--------FPVLEAVATEGKGV 179

Query: 180 HAVFQEAAEVALSS 193
               +E + + L+ 
Sbjct: 180 FETLKEVSRLVLAR 193


>6GDG-D nrPDB
          Length = 248

 Score = 49.9 bits (118), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 27/142 (19%), Positives = 52/142 (36%), Gaps = 17/142 (11%)

Query: 17  SVKVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMVNLQVKGKPVHLHIWDTAGQD 76
           + +++L+G    GK++++            +      +    QV    V+ H++D  GQ 
Sbjct: 35  THRLLLLGADNSGKSTIVKQMRILHGGSGGSGGTSGIFETKFQVD--KVNFHMFDVGGQR 92

Query: 77  DYDRLRPLFYPDASVLLLCFDVTSPNSFDNIF--------NRWYPEVNHFCKKVPIIVVG 128
           D  R     + D + ++   D +  N              NRW   ++       +I+  
Sbjct: 93  DERRKWIQCFNDVTAIIFVVDSSDYNRLQEALNLFKSIWNNRWLRTIS-------VILFL 145

Query: 129 CKTDLCKDKSLVNKLRRNGLEP 150
            K DL  +K L  K +     P
Sbjct: 146 NKQDLLAEKVLAGKSKIEDYFP 167


>1WF3-A nrPDB
          Length = 301

 Score = 49.5 bits (117), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 37/206 (17%), Positives = 65/206 (31%), Gaps = 29/206 (14%)

Query: 20  VVLVGDGGCGKTSLLMVFADGAFPE-SYTPTVFERYMVNLQVKGKPVHLHIWDTAGQDD- 77
           V +VG    GK++LL           S  P    + +  +  +G+   +   DT G    
Sbjct: 10  VAIVGKPNVGKSTLLNNLLGVKVAPISPRPQTTRKRLRGILTEGRR-QIVFVDTPGLHKP 68

Query: 78  YDRL-----RPLF--YPDASVLLLCFDVTSPNSFDNIFNRWYPEVNHFCKKVPIIVVGCK 130
            D L     + ++    D + ++   D+  P + ++        +     KVPI++VG K
Sbjct: 69  MDALGEFMDQEVYEALADVNAVVWVVDLRHPPTPED--ELVARALKPLVGKVPILLVGNK 126

Query: 131 TDLCKDKSLVNKLRRN-------------GLEPVTYHRGQEMA-RSVGAVAYLECSARLH 176
            D  K      K                     V   +   +A    G   Y E  A+  
Sbjct: 127 LDAAKYPEEAMKAYHELLPEAEPRMLSALDERQVAELKADLLALMPEGPFFYPEDYAKSD 186

Query: 177 DNVHAVFQEAAEVALSSRGRNFWRRI 202
                     AE+      +  W  +
Sbjct: 187 QTFGE---WVAEILREEAMKRLWHEV 209


>6IAE-A nrPDB
          Length = 223

 Score = 49.1 bits (116), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 33/203 (16%), Positives = 63/203 (31%), Gaps = 38/203 (18%)

Query: 18  VKVVLVGDGGCGKTSLLMVF--ADGAFPESYTPT-----------VFERYMVNLQVKG-K 63
           VK++++G    GK+++            + Y  T           + +      Q  G K
Sbjct: 10  VKILVLGPSKSGKSTVTNFLAGTRDTPTKEYHETNPLRVLEVEIALDDTRRSGRQAAGLK 69

Query: 64  PVHLHIWDTAGQDDYDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVNHFCKKVP 123
              + +WD  G   +    P    +A  ++  F+     S   +   WY           
Sbjct: 70  KAVVQLWDVGGSSKHQAGWPAIASNADGIIYVFNPEVKGSEKELLL-WYKNFAL------ 122

Query: 124 IIVVGCKTDLCKDKSLVNKLRRNGLEPVTYHRGQ-EMA----------RSVGAVAYLECS 172
                 + +L  D +   ++        ++H    E A          + +  +  LE S
Sbjct: 123 -----NQDELDDDNNFKMRVTDGHSLIFSHHSSLPEFAVGDNAIPPMPKQLQGIRALETS 177

Query: 173 ARLH-DNVHAVFQEAAEVALSSR 194
                DN    F    E  ++SR
Sbjct: 178 LDYQSDNFKEAFDALVEQIIASR 200


>1MKY-A nrPDB
          Length = 439

 Score = 48.0 bits (113), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 31/192 (16%), Positives = 54/192 (28%), Gaps = 28/192 (14%)

Query: 9   EEAPPGVRSVKVVLVGDGGCGKTSLLMVFADGA--FPESYTPTVFERYMVNLQVKGKPVH 66
           E  P    ++KV +VG    GK++L     +           T  +     + + G+   
Sbjct: 172 ESKPEITDAIKVAIVGRPNVGKSTLFNAILNKERALVSPIPGTTRDPVDDEVFIDGRKYV 231

Query: 67  LHIWDTAGQDDYDRLRP------LFYP------DASVLLLCFDVTSPNSFDNIFNRWYPE 114
               DTAG     R+ P        Y        A V+++  D T   +  +       E
Sbjct: 232 F--VDTAGLRRKSRVEPRTVEKYSNYRVVDSIEKADVVVIVLDATQGITRQDQRMAGLME 289

Query: 115 VNHFCKKVPIIVVGCKTDLCKDKSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSAR 174
                     +VV  K DL   +                   +        + +   SA 
Sbjct: 290 RRGRAS----VVVFNKWDLVVHREKRYDEFTKLFRE------KLYFIDYSPLIF--TSAD 337

Query: 175 LHDNVHAVFQEA 186
              N+  +    
Sbjct: 338 KGWNIDRMIDAM 349



 Score = 38.7 bits (89), Expect = 0.002,   Method: Composition-based stats.
 Identities = 26/187 (13%), Positives = 53/187 (28%), Gaps = 42/187 (22%)

Query: 20  VVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMVNLQVKGKPVHLHIWDTAG----- 74
           V++VG    GK++L                   R  V   V+       + DT G     
Sbjct: 4   VLIVGRPNVGKSTLFNKLVKKKKAIVEDEEGVTRDPVQDTVEWYGKTFKLVDTCGVFDNP 63

Query: 75  ----QDDYDRLRPLFYPDASVLLLCFD----VTSPNSFDNIFNRWYPEVNHFCKKVPIIV 126
                     +      +A ++L   D    +T  +  +++ +            V  I+
Sbjct: 64  QDIISQKMKEVTLNMIREADLVLFVVDGKRGITKED--ESLADFLRK------STVDTIL 115

Query: 127 VGCKTDLCKDKSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLE---CSARLHDNVHAVF 183
           V  K           +  R     V           + ++ + E    SA  + N+  + 
Sbjct: 116 VANKA----------ENLREFEREVKPE--------LYSLGFGEPIPVSAEHNINLDTML 157

Query: 184 QEAAEVA 190
           +   +  
Sbjct: 158 ETIIKKL 164


>5DN8-A nrPDB
          Length = 446

 Score = 47.6 bits (112), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 28/184 (15%), Positives = 54/184 (29%), Gaps = 33/184 (17%)

Query: 18  VKVVLVGDGGCGKTSLLMVFADGAFPESYTP--TVFERYMVNLQVKGKPVHLHIWDTAGQ 75
           +K+ ++G    GK++L+           Y    T  +   +      +   L   DTAG 
Sbjct: 179 IKIAMIGRPNVGKSTLINRLLGEERVIVYDQPGTTRDSIYIPFARNDENYTLI--DTAGI 236

Query: 76  DDYDRLRP-----------LFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVNHFCKKVPI 124
               +++                 A V++   D     +  ++  R    +      + I
Sbjct: 237 RRRAKIQDYVEKFSMIKSLQAMHAADVVIFLLDARQGVTEQDL--RLLNRIVEAGVSLII 294

Query: 125 IVVGCKTDLC--KDKSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNVHAV 182
            V   K D    +++  V       +  V        AR          SA     V  +
Sbjct: 295 AV--NKWDGLNIEERDNVRNAIDRRMPFVD------FARRYF------ISALHGTGVGKL 340

Query: 183 FQEA 186
           F+  
Sbjct: 341 FRAI 344


>5YMX-A nrPDB
          Length = 203

 Score = 47.2 bits (111), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 35/198 (17%), Positives = 65/198 (32%), Gaps = 36/198 (18%)

Query: 18  VKVVLVGDGGCGKTSLLMVFADGA-----------FPESYTPTVFERYM--VNLQVKGKP 64
            K+V  G G CGKT+ L  +                      T+F  ++     +++G  
Sbjct: 13  CKIVYYGPGLCGKTTNL-QYIYNKTAAETKGKLISLSTETDRTLFFDFLPLSLGEIRGFK 71

Query: 65  VHLHIWDTAGQDDYDRLRPLFYPDASVLLLCFDV------TSPNSFDNIFNRWYPEVNHF 118
              H++   GQ  YD  R L       ++   D        +  S +N+      E  + 
Sbjct: 72  TRFHLYTVPGQVFYDASRKLILKGVDGVVFVADSQIERMEANMESLENLRIN-LAEQGYD 130

Query: 119 CKKVPIIVVGCKTDLCKDKSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDN 178
             K+P ++   K DL                 VT    ++ A +   +   +  A     
Sbjct: 131 LNKIPYVIQYNKRDLPN--------------AVTVEEMRK-ALNHRNIPEYQAVAPTGVG 175

Query: 179 VHAVFQEAAEVALSSRGR 196
           V    +  A++ L+   +
Sbjct: 176 VFDTLKAVAKLVLTELKK 193


>3CB4-D nrPDB
          Length = 599

 Score = 46.8 bits (110), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 24/184 (13%), Positives = 44/184 (23%), Gaps = 41/184 (22%)

Query: 29  GKTSL---LMVFADGAFPESYTPTVFER----YMVNLQV------------KGKPVHLHI 69
           GK++L   ++    G         V +         + +             G+   L+ 
Sbjct: 16  GKSTLSDRIIQICGGLSDREMEAQVLDSMDLERERGITIKAQSVTLDYKASDGETYQLNF 75

Query: 70  WDTAGQDDYDRLRPLFYPDASVLLLCFDV---TSPNSFDNIFNRWYPEVNHFCKKVPIIV 126
            DT G  D+              LL  D        +  N +     ++        ++ 
Sbjct: 76  IDTPGHVDFSYEVSRSLAACEGALLVVDAGQGVEAQTLANCYTAMEMDLE-------VVP 128

Query: 127 VGCKTDLCKDKSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNVHAVFQEA 186
           V  K DL              +  +                   CSA+    V  V +  
Sbjct: 129 VLNKIDLPAADPERVAEEIEDIVGIDATDAVR------------CSAKTGVGVQDVLERL 176

Query: 187 AEVA 190
               
Sbjct: 177 VRDI 180


>6D4G-A nrPDB
          Length = 271

 Score = 46.4 bits (109), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 25/114 (21%), Positives = 41/114 (35%), Gaps = 21/114 (18%)

Query: 90  SVLLLCFDVTSP--NSFDNIFN---RWYPEVNHFCKKVPIIVVGCKTDLCKDKSLVNKLR 144
              LL  DV+     +FD+        Y ++    K  PI++V  K D   ++ +     
Sbjct: 163 DGFLLGIDVSRGMNRNFDDQLKFVSNLYNQLAKTKK--PIVIVLTKCDEGVERYI----- 215

Query: 145 RNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNVHAVFQEAAEVALSSRGRNF 198
                          A S   +  +E SAR + NV   F    ++   SRG+  
Sbjct: 216 ---------RDAHTFALSKKNLQVVETSARSNVNVDLAFSTLVQLIDKSRGKTK 260


>2DYK-A nrPDB
          Length = 161

 Score = 45.3 bits (106), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 25/125 (20%), Positives = 36/125 (28%), Gaps = 19/125 (15%)

Query: 19  KVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMVNLQVKGKPVHLHIWDTAG---- 74
           KVV+VG    GK+SL                   R +    V+       + DT G    
Sbjct: 3   KVVIVGRPNVGKSSLFNRLLKKRSAVVADVPGVTRDLKEGVVETDRGRFLLVDTGGLWSG 62

Query: 75  -------QDDYDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVNHFCKKVPIIVV 127
                  Q+  DR            ++ F V                +    K  P+I+V
Sbjct: 63  DKWEKKIQEKVDRALE------DAEVVLFAVDGRAELTQADYEVAEYLRRKGK--PVILV 114

Query: 128 GCKTD 132
             K D
Sbjct: 115 ATKVD 119


>2E87-A nrPDB
          Length = 357

 Score = 44.9 bits (105), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 32/200 (16%), Positives = 65/200 (32%), Gaps = 32/200 (16%)

Query: 20  VVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMVNL-QVKGKPVHLHIWDTAGQ--- 75
           VV+ G    GK++LL                F    +N+ Q +       I DT G    
Sbjct: 170 VVIAGHPNVGKSTLLKALTTAK--PEIASYPFTTRGINVGQFEDGYFRYQIIDTPGLLDR 227

Query: 76  --------DDYDRLRPLFYPDASVLLLCFDVTSPNSF-DNIFNRWYPEVNHFCKKVPIIV 126
                   +    L   +    ++++  FD +    F        + EV+   K +P +V
Sbjct: 228 PISERNEIEKQAILALRYL--GNLIIYIFDPSEHCGFPLEEQIHLFEEVHGEFKDLPFLV 285

Query: 127 VGCKTDLCKDKSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNVHAVFQEA 186
           V  K D+  ++++                 ++  +  G    ++ SA     +  V +E 
Sbjct: 286 VINKIDVADEENIKRL--------------EKFVKEKGLNP-IKISALKGTGIDLVKEEI 330

Query: 187 AEVALSSRGRNFWRRITQGF 206
            +       +    +I +  
Sbjct: 331 IKTLRPLAEKVAREKIEREL 350


>5LAD-A nrPDB
          Length = 404

 Score = 44.5 bits (104), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 31/134 (23%), Positives = 55/134 (41%), Gaps = 20/134 (14%)

Query: 20  VVLVGDGGCGKTSLLMVFADG--AFPESYTPTVFERYMVNLQVKG-KPVHLHIWDTAGQD 76
           +V+ G    GK+S +        +    Y  T  +    ++++    PV L   DT G D
Sbjct: 12  IVVAGRRNVGKSSFMNALVGQNVSIVSEYAGTTTDPVYKSMELYPVGPVTL--VDTPGLD 69

Query: 77  DYDRL--------RPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVNHFCKKVPIIVVG 128
           D   L        R +FY  A   +L  D + P  +++     + E+     ++P +VV 
Sbjct: 70  DVGELGRLRVEKARRVFYR-ADCGILVTD-SEPTPYEDDVVNLFKEM-----EIPFVVVV 122

Query: 129 CKTDLCKDKSLVNK 142
            K D+  +K+   K
Sbjct: 123 NKIDVLGEKAEELK 136


>5ZZM-A nrPDB
          Length = 426

 Score = 44.5 bits (104), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 35/187 (18%), Positives = 63/187 (33%), Gaps = 45/187 (24%)

Query: 20  VVLVGDGGCGKTSLLMV------FADGAFPESYTPTVFERYMVNLQVKGKPVHLHIWDTA 73
           V LVG    GK++L         +A      +  PT+     +++   G+ V     DT 
Sbjct: 200 VSLVGYTNAGKSTLFNRITEARVYAADQLFATLDPTL---RRIDVADVGETVLA---DTV 253

Query: 74  GQDD---------YDRLRPLFYPDASVLLLCFDVTSPNSFDNI--FNRWYPEVNHFCKKV 122
           G            +          A++LL   D       +NI   N    E++    ++
Sbjct: 254 GFIRHLPHDLVAAFKA-TLQETRQATLLLHVIDAADVRVQENIEAVNTVLEEID--AHEI 310

Query: 123 PIIVVGCKTDLCKD-KSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNVHA 181
           P ++V  K D+ +D +  +++   N    V                    SA+    +  
Sbjct: 311 PTLLVMNKIDMLEDFEPRIDRDEENKPNRVWL------------------SAQTGAGIPQ 352

Query: 182 VFQEAAE 188
           +FQ   E
Sbjct: 353 LFQALTE 359


>4V7F-o nrPDB
          Length = 647

 Score = 44.1 bits (103), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 41/212 (19%), Positives = 76/212 (35%), Gaps = 23/212 (10%)

Query: 4   AQAAGEEAPPGVRSVKVVLVGDGGCGKTSLLMVFAD-GAFPESYTPTVFERYMVNLQVKG 62
            Q  G        +  +++ G    GK+S L          + Y  T    Y+ +     
Sbjct: 154 RQHIGRLPSIDPNTRTLLICGYPNVGKSSFLRCITKSDVDVQPYAFTTKSLYVGHF--DY 211

Query: 63  KPVHLHIWDTAG-----QDDYDRLRPLF-YPDAS---VLLLCFDVTSPNSFD-NIFNRWY 112
           K +     DT G      ++ + +     Y  A     +L   D++    F      + +
Sbjct: 212 KYLRFQAIDTPGILDRPTEEMNNIEMQSIYAIAHLRSCVLYFMDLSEQCGFTIEAQVKLF 271

Query: 113 PEVNHFCKKVPIIVVGCKTDLCKDKSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECS 172
             +        ++VV  KTD+ +    +++ R   LE V         + V  V  +  S
Sbjct: 272 HSIKPLFANKSVMVVINKTDIIR-PEDLDEERAQLLESV---------KEVPGVEIMTSS 321

Query: 173 ARLHDNVHAVFQEAAEVALSSRGRNFWRRITQ 204
            +L +NV  V  +A E  L+SR  N  +  ++
Sbjct: 322 CQLEENVMEVRNKACEKLLASRIENKLKSQSR 353


>3PR1-A nrPDB
          Length = 195

 Score = 43.7 bits (102), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 31/200 (15%), Positives = 59/200 (29%), Gaps = 38/200 (19%)

Query: 1   MTAAQAAGEEAPPGVRSVKVVLVGDGGCGKTSLLMVFADGA--FPESYTPTVFERYMVNL 58
           +  A+  G+  PP      V  VG    GK+SLL    +    F      T  +   +N 
Sbjct: 9   VKVARTPGDYPPPLKGE--VAFVGRSNVGKSSLLNALFNRKIAFVSK---TPGKTRSINF 63

Query: 59  QVKGKPVHLHIWDTAG--------QDD--YDRLRPLFYPDA----SVLLLCFDVTSPNSF 104
            +     +    D  G        ++   + RL   ++ +      V LL      P   
Sbjct: 64  YLVNSKYYF--VDLPGYGYAKVSKKERMLWKRLVEDYFKNRWSLQMVFLLVDGRIPPQDS 121

Query: 105 DNIFNRWYPEVNHFCKKVPIIVVGCKTDLCKDKSLVNKLRRNGLEPVTYHRGQEMARSVG 164
           D +   W   +      +P  +V  K D            +           +++    G
Sbjct: 122 DLMMVEWMKSL-----NIPFTIVLTKMD----------KVKMSERAKKLEEHRKVFSKYG 166

Query: 165 AVAYLECSARLHDNVHAVFQ 184
               +  S+   + +  +  
Sbjct: 167 EYTIIPTSSVTGEGISELLD 186


>3R9W-A nrPDB
          Length = 307

 Score = 43.7 bits (102), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 31/131 (23%), Positives = 40/131 (30%), Gaps = 28/131 (21%)

Query: 20  VVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMVNLQVKGKPVHLHI--WDTAGQ-- 75
           V +VG    GK++LL     G      +P      M  L VK  P    I   DT G   
Sbjct: 12  VAIVGKPNVGKSTLLNNLL-GTKVSIISPKAGTTRMRVLGVKNIPNEAQIIFLDTPGIYE 70

Query: 76  --------DDYDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVNHFCKKV----- 122
                        +      +A V+L   D T           W P      +       
Sbjct: 71  PKKSDVLGHSMVEIAKQSLEEADVILFMIDAT---------EGWRPRDEEIYQNFIKPLN 121

Query: 123 -PIIVVGCKTD 132
            P+IVV  K D
Sbjct: 122 KPVIVVINKID 132


>6GB2-BC nrPDB
          Length = 657

 Score = 43.7 bits (102), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 37/189 (19%), Positives = 64/189 (33%), Gaps = 35/189 (18%)

Query: 20  VVLVGDGGCGKTSLLMVFADGAFPESYTPTVF--------ERYMVNLQVKGKPVHLHIWD 71
           V ++G    GKT+LL       F ++    V           ++V+L   G+ +     D
Sbjct: 113 VTIMGHVDHGKTTLL-----DKFRKTQVAAVETGGITQHIGAFLVSLP-SGEKITF--LD 164

Query: 72  TAGQDDYDRLRPLFYPDASV---LLLCFDVTSPNSFDNIFNRWYPEVNHFCK-KVPIIVV 127
           T G   +  +R      A V   ++L            +  +    + H    +VPII+ 
Sbjct: 165 TPGHAAFSAMRA---RGAQVTDIVVLVVAADDG-----VMKQTVESIQHAKDAQVPIILA 216

Query: 128 GCKTDLCKDKSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNVHAVFQEAA 187
             K D  +      K      + V    G       G V  +  SA   DN+ A+ +   
Sbjct: 217 VNKCDKAEADPEKVKKELLAYDVVCEDYG-------GDVQAVPVSALTGDNLMALAEATV 269

Query: 188 EVALSSRGR 196
            +A     +
Sbjct: 270 ALAEMLELK 278


>4KJZ-A nrPDB
          Length = 473

 Score = 43.0 bits (100), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 28/170 (16%), Positives = 54/170 (31%), Gaps = 18/170 (10%)

Query: 20  VVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMVNLQVKGKPVHLHIWDTAGQDDYD 79
           VV++G    GKT+LL  +   +           +++   +VK     +   DT G + + 
Sbjct: 75  VVIMGHVDHGKTTLLD-YLRKSRIAEKEAGGITQHVGAFEVKTPQGTVVFIDTPGHEAFT 133

Query: 80  RLRPLFYPDASVLLLCFDVTS---PNSFDNIFNRWYPEVNHFCKKVPIIVVGCKTDLCKD 136
            +R      A + ++         P + + I +              +I    K DL + 
Sbjct: 134 TIRQRGAKVADIAVIVIAADDGIMPQTEEAIAHAKAAGAK-------LIFAINKIDLPQA 186

Query: 137 KSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNVHAVFQEA 186
                K +      V    G       G    +  SA+    V  + +  
Sbjct: 187 DPEKVKRQLMERGFVPEEYG-------GDAIVIPISAKTGQGVQDLLEMI 229


>4B44-A nrPDB
          Length = 363

 Score = 43.0 bits (100), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 28/170 (16%), Positives = 54/170 (31%), Gaps = 18/170 (10%)

Query: 20  VVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMVNLQVKGKPVHLHIWDTAGQDDYD 79
           VV++G    GKT+LL  +   +           +++   +VK     +   DT G + + 
Sbjct: 76  VVIMGHVDHGKTTLLD-YLRKSRIAEKEAGGITQHVGAFEVKTPQGTVVFIDTPGHEAFT 134

Query: 80  RLRPLFYPDASVLLLCFDVTS---PNSFDNIFNRWYPEVNHFCKKVPIIVVGCKTDLCKD 136
            +R      A + ++         P + + I +              +I    K DL + 
Sbjct: 135 TIRQRGAKVADIAVIVIAADDGIMPQTEEAIAHAKAAGAK-------LIFAINKIDLPQA 187

Query: 137 KSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNVHAVFQEA 186
                K +      V    G       G    +  SA+    V  + +  
Sbjct: 188 DPEKVKRQLMERGFVPEEYG-------GDAIVIPISAKTGQGVQDLLEMI 230


>3V00-C nrPDB
          Length = 356

 Score = 42.6 bits (99), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 33/195 (16%), Positives = 62/195 (31%), Gaps = 54/195 (27%)

Query: 46  YTPTVFERYMVNLQVKG--------KPVHLHIWDTAGQDDYDRLRPLFYPDASVLLLCFD 97
           Y PT  +     ++  G        K ++  ++D  GQ    +     +   + ++ C  
Sbjct: 169 YVPTEQDVLRSRVKTTGIIETQFSFKDLNFRMFDVGGQRSERKKWIHCFEGVTAIIFCVA 228

Query: 98  VTS--------------PNS---FDNI-FNRWYPEVNHFCKKVPIIVVGCKTDLCKDKSL 139
           ++                 S   F++I  N+W+           II+   K DL ++K  
Sbjct: 229 LSDYDLVLAEDEEMNRMHESMHLFNSICNNKWFT-------DTSIILFLNKKDLFEEKIK 281

Query: 140 VNKLRRNGLEPV---TYHRGQEMARSVGAVAYLE--------------CSARLHDNVHAV 182
            + L     E     TY      A +   V +LE                A    NV  V
Sbjct: 282 KSPLTICYPEYAGSNTYEE----AGNYIKVQFLELNMRRDVKEIYSHMTCATDTQNVKFV 337

Query: 183 FQEAAEVALSSRGRN 197
           F    ++ +    ++
Sbjct: 338 FDAVTDIIIKENLKD 352



 Score = 31.8 bits (71), Expect = 0.25,   Method: Composition-based stats.
 Identities = 10/28 (35%), Positives = 19/28 (67%)

Query: 9  EEAPPGVRSVKVVLVGDGGCGKTSLLMV 36
          E+A    R+VK++L+G G  GK++++  
Sbjct: 27 EDAEKDARTVKLLLLGAGESGKSTIVKQ 54


>5KUT-A nrPDB
          Length = 189

 Score = 42.6 bits (99), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 28/136 (20%), Positives = 48/136 (35%), Gaps = 14/136 (10%)

Query: 20  VVLVGDGGCGKTSLLMVFAD---GAFPESYTPTVFERYMVNLQVKGKPVHLHIWD--TAG 74
             +VG  G GK++ L  F     G       P  +   +  +QV G+  +L + +  T G
Sbjct: 12  CKVVGACGVGKSAFLQAFLGRGLGHQDTREQPPGYA--IDTVQVNGQEKYLILCEVGTDG 69

Query: 75  QDDYDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVNHFCKKVPIIVVGCKTDLC 134
                 L         V  L FD + P SF +  + +     +   + P + V  K DL 
Sbjct: 70  L-----LATSLDATCDVACLMFDGSDPKSFAHCASVYKHH--YMDGQTPCLFVSSKADLP 122

Query: 135 KDKSLVNKLRRNGLEP 150
           +  ++           
Sbjct: 123 EGVAVSGPSPAEFCRK 138


>3C5H-A nrPDB
          Length = 255

 Score = 42.6 bits (99), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 23/106 (21%), Positives = 37/106 (34%), Gaps = 21/106 (19%)

Query: 90  SVLLLCFDVTSP--NSFDNIFN---RWYPEVNHFCKKVPIIVVGCKTDLCKDKSLVNKLR 144
              LL  DV+     +FD+        Y ++    K  PI+VV  K D   ++ +     
Sbjct: 164 DGFLLGIDVSRGMNRNFDDQLKFVSNLYNQLAKTKK--PIVVVLTKCDEGVERYI----- 216

Query: 145 RNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNVHAVFQEAAEVA 190
                          A S   +  +E SAR + NV   F    ++ 
Sbjct: 217 ---------RDAHTFALSKKNLQVVETSARSNVNVDLAFSTLVQLI 253


>3EC1-A nrPDB
          Length = 369

 Score = 42.6 bits (99), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 22/97 (22%), Positives = 32/97 (32%), Gaps = 14/97 (14%)

Query: 94  LCFDVTSPNSFDNIFNRWYPEVNHFCKKVPIIVVGCKTDLCKDKSLVNKLRRNGLEPVTY 153
           L  ++     F+  F    P +  F    PI++VG K DL        KL R        
Sbjct: 74  LVVNIVDIFDFNGSF---IPGLPRFAADNPILLVGNKADLLPRSVKYPKLLRW------- 123

Query: 154 HRGQEMARSVGAVAYLEC--SARLHDNVHAVFQEAAE 188
              + MA  +G      C  SA     +  V +    
Sbjct: 124 --MRRMAEELGLCPVDVCLVSAAKGIGMAKVMEAINR 158


>3J4J-A nrPDB
          Length = 569

 Score = 42.6 bits (99), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 28/170 (16%), Positives = 54/170 (31%), Gaps = 18/170 (10%)

Query: 20  VVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMVNLQVKGKPVHLHIWDTAGQDDYD 79
           VV++G    GKT+LL  +   +           +++   +VK     +   DT G + + 
Sbjct: 76  VVIMGHVDHGKTTLLD-YLRKSRIAEKEAGGITQHVGAFEVKTPQGTVVFIDTPGHEAFT 134

Query: 80  RLRPLFYPDASVLLLCFDVTS---PNSFDNIFNRWYPEVNHFCKKVPIIVVGCKTDLCKD 136
            +R      A + ++         P + + I +              +I    K DL + 
Sbjct: 135 TIRQRGAKVADIAVIVIAADDGIMPQTEEAIAHAKAAGAK-------LIFAINKIDLPQA 187

Query: 137 KSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNVHAVFQEA 186
                K +      V    G       G    +  SA+    V  + +  
Sbjct: 188 DPEKVKRQLMERGFVPEEYG-------GDAIVIPISAKTGQGVQDLLEMI 230


>2GTP-A nrPDB
          Length = 323

 Score = 42.2 bits (98), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 31/193 (16%), Positives = 59/193 (30%), Gaps = 46/193 (23%)

Query: 44  ESYTPTVFERYMVNLQVKG--------KPVHLHIWDTAGQDDYDRLRPLFYPDASVLLLC 95
            +Y PT  +     ++  G        K +H  ++D  GQ    +     +   + ++ C
Sbjct: 134 PNYIPTQQDVLRTRVKTTGIVETHFTFKDLHFKMFDVGGQRSERKKWIHCFEGVTAIIFC 193

Query: 96  FDVTS--------------PNS---FDNI-FNRWYPEVNHFCKKVPIIVVGCKTDLCKDK 137
             ++                 S   FD+I  N+W+           II+   K DL ++K
Sbjct: 194 VALSDYDLVLAEDEEMNRMHESMKLFDSICNNKWFT-------DTSIILFLNKKDLFEEK 246

Query: 138 SLVNKLR---RNGLEPVTYHRGQEM----------ARSVGAVAYLECSARLHDNVHAVFQ 184
              + L           TY                 +    +      A    NV  VF 
Sbjct: 247 IKKSPLTICYPEYAGSNTYEEAAAYIQCQFEDLNKRKDTKEIYTHFTCATDTKNVQFVFD 306

Query: 185 EAAEVALSSRGRN 197
              +V + +  ++
Sbjct: 307 AVTDVIIKNNLKD 319



 Score = 31.8 bits (71), Expect = 0.24,   Method: Composition-based stats.
 Identities = 8/21 (38%), Positives = 15/21 (71%)

Query: 16 RSVKVVLVGDGGCGKTSLLMV 36
          R VK++L+G G  GK++++  
Sbjct: 1  REVKLLLLGAGESGKSTIVKQ 21


>2CXX-A nrPDB
          Length = 190

 Score = 41.8 bits (97), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 34/204 (16%), Positives = 60/204 (29%), Gaps = 42/204 (20%)

Query: 20  VVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMVNLQVKGKPVHLHIWDTAG----- 74
           ++  G    GK++L+             P    R ++ ++ K   +     D  G     
Sbjct: 4   IIFAGRSNVGKSTLIYRLTGKKVRRGKRP-GVTRKIIEIEWKNHKII----DMPGFGFMM 58

Query: 75  ------QDDYDRLRPLFY----PDASVLLLCFDVTSPNSFDNIFNRWYP--EVNHFCK-- 120
                 Q+        F      +  V +L  D     +   I  RW    E+    +  
Sbjct: 59  GLPKEVQERIKDEIVHFIEDNAKNIDVAVLVVD---GKAAPEIIKRWEKRGEIPIDVEFY 115

Query: 121 ------KVPIIVVGCKTDLCKDKSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSAR 174
                  +P IV   K D  K+   V          V      ++        ++  SA+
Sbjct: 116 QFLRELDIPTIVAVNKLDKIKNVQEVINFLAEKF-EVPLSEIDKV--------FIPISAK 166

Query: 175 LHDNVHAVFQEAAEVALSSRGRNF 198
             DN+  +     EV    +GR  
Sbjct: 167 FGDNIERLKNRIFEVIRERQGRRV 190


>2QAG-A nrPDB
          Length = 361

 Score = 41.0 bits (95), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 24/115 (20%), Positives = 42/115 (36%), Gaps = 29/115 (25%)

Query: 17  SVKVVLVGDGGCGKTSLLMV-FADGAFPESYTP--------TV-FERYMVNLQVKGKPVH 66
              +++VG+ G GK++L+   F    +PE   P        TV  E   V ++ +G  + 
Sbjct: 37  EFTLMVVGESGLGKSTLINSLFLTDLYPERVIPGAAEKIERTVQIEASTVEIEERGVKLR 96

Query: 67  LHIWDTAGQDDYDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVNHFCKK 121
           L + DT G           Y DA        +   + F  I +    +   +   
Sbjct: 97  LTVVDTPG-----------YGDA--------INCRDCFKTIISYIDEQFERYLHD 132


>3FTQ-A nrPDB
          Length = 274

 Score = 41.0 bits (95), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 24/115 (20%), Positives = 42/115 (36%), Gaps = 29/115 (25%)

Query: 17  SVKVVLVGDGGCGKTSLLMV-FADGAFPESYTP--------TV-FERYMVNLQVKGKPVH 66
              +++VG+ G GK++L+   F    +PE   P        TV  E   V ++ +G  + 
Sbjct: 5   EFTLMVVGESGLGKSTLINSLFLTDLYPERIIPGAAEKIERTVQIEASTVEIEERGVKLR 64

Query: 67  LHIWDTAGQDDYDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVNHFCKK 121
           L + DT G           Y DA        +   + F  I +    +   +   
Sbjct: 65  LTVVDTPG-----------YGDA--------INCRDCFKTIISYIDEQFERYLHD 100


>3IZY-P nrPDB
          Length = 537

 Score = 40.6 bits (94), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 29/163 (17%), Positives = 51/163 (31%), Gaps = 19/163 (11%)

Query: 20  VVLVGDGGCGKTSLLMVFADGA---FPESYTPTVFERYMVNLQVKGKPVHLHIWDTAGQD 76
           V ++G    GKT+LL                      ++V+L   G+ +     DT G  
Sbjct: 7   VTIMGHVDHGKTTLLDKLRKTQVAAMEAGGITQHIGAFLVSLP-SGEKITF--LDTPGHA 63

Query: 77  DYDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVNHFCK-KVPIIVVGCKTDLCK 135
            +  +R        +++L            +  +    + H     VPI++   K D  +
Sbjct: 64  AFSAMRARGTQVTDIVILVVAADDG-----VMKQTVESIQHAKDAHVPIVLAINKCDKAE 118

Query: 136 DKSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDN 178
                 K      + V    G       G V  +  SA   +N
Sbjct: 119 ADPEKVKKELLAYDVVCEDYG-------GDVQAVHVSALTGEN 154


>1SHZ-A nrPDB
          Length = 340

 Score = 40.6 bits (94), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 18/70 (25%), Positives = 30/70 (42%), Gaps = 10/70 (14%)

Query: 9  EEAPPGVRSVKVVLVGDGGCGKTSLLMVF-------ADGAFPESYTPTVFER--YMVNLQ 59
          E+     R VK++L+G G  GK++ L           D    E + PT++      + + 
Sbjct: 4  EDGEKAAREVKLLLLGAGESGKSTFLKQMRIIHGQDFDQRAREEFRPTIYSNVIKGMRVL 63

Query: 60 VKGKPVHLHI 69
          V  +   LHI
Sbjct: 64 VDARE-KLHI 72



 Score = 38.7 bits (89), Expect = 0.002,   Method: Composition-based stats.
 Identities = 28/166 (16%), Positives = 53/166 (31%), Gaps = 38/166 (22%)

Query: 63  KPVHLHIWDTAGQDDYDRLRPLFYPDASVLLLC-----FD---VTSPNS---------FD 105
           K +H  ++D  GQ    +     +   + ++ C     +D   +    +         FD
Sbjct: 178 KDLHFKMFDVGGQRSERKKWFECFEGVTAIIFCVALSDYDQVLMEDRQTNRMHESMKLFD 237

Query: 106 NI-FNRWYPEVNHFCKKVPIIVVGCKTDLCKDKSLVNKLRRNGLEPV---TYHRGQEM-- 159
           +I  N+W+           II+   K DL ++K   + L     E     TY        
Sbjct: 238 SICNNKWFT-------DTSIILFLNKKDLFEEKIKKSPLTICYPEYAGSNTYEEAAAYIQ 290

Query: 160 --------ARSVGAVAYLECSARLHDNVHAVFQEAAEVALSSRGRN 197
                    +    +      A    NV  VF    +V + +  ++
Sbjct: 291 CQFEDLNKRKDTKEIYTHFTCATDTKNVQFVFDAVTDVIIKNNLKD 336


>3JB9-B nrPDB
          Length = 984

 Score = 40.3 bits (93), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 29/163 (17%), Positives = 54/163 (33%), Gaps = 28/163 (17%)

Query: 29  GKTSLLMVFADGAFPES---------YTPTVFERYMVNLQVKGKPVHLHIWD-------- 71
           GK++LL +      P++         YT T +      + +K  P+ L + D        
Sbjct: 153 GKSALLDLLVYYTHPDTKPPKRRSLRYTDTHYLERERVMSIKSTPLTLAVSDMKGKTFAF 212

Query: 72  ----TAGQDDYDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVNHFC-KKVPIIV 126
               T G  D+          +  ++L  DV      + +       + H     +PI++
Sbjct: 213 QCIDTPGHVDFVDEVAAPMAISDGVVLVVDVI-----EGVMINTTRIIKHAILHDMPIVL 267

Query: 127 VGCKTD-LCKDKSLVNKLRRNGLEPVTYHRGQEMARSVGAVAY 168
           V  K D L  +  L      + L  V       + +    + Y
Sbjct: 268 VLNKVDRLILELRLPPNDAYHKLRHVIDEVNDNICQISKDLKY 310


>3IEU-A nrPDB
          Length = 301

 Score = 40.3 bits (93), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 30/178 (16%), Positives = 56/178 (31%), Gaps = 38/178 (21%)

Query: 20  VVLVGDGGCGKTSLLMVFADGAFP-ESYTPTVFERYMVNLQVKGKPVHLHIWDTAGQ--D 76
           + +VG    GK++LL           S         +V +  +G        DT G   +
Sbjct: 11  IAIVGRPNVGKSTLLNKLLGQKISITSRKAQTTRHRIVGIHTEGA-YQAIYVDTPGLHME 69

Query: 77  DYDRLRPL-------FYPDASVLLLCFDVTSPNSFDNIFNRWYPEVNHFCK-----KVPI 124
           +   +  L          D  +++   + T          RW P+           K P+
Sbjct: 70  EKRAINRLMNKAASSSIGDVELVIFVVEGT----------RWTPDDEMVLNKLREGKAPV 119

Query: 125 IVVGCKTDLCKDKSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNVHAV 182
           I+   K D  ++K+ +                Q +A  +  +  +  SA    NV  +
Sbjct: 120 ILAVNKVDNVQEKADLLPHL------------QFLASQMNFLDIVPISAETGLNVDTI 165


>2ODE-A nrPDB
          Length = 350

 Score = 39.5 bits (91), Expect = 0.001,   Method: Composition-based stats.
 Identities = 31/193 (16%), Positives = 60/193 (31%), Gaps = 46/193 (23%)

Query: 44  ESYTPTVFERYMVNLQVKG--------KPVHLHIWDTAGQDDYDRLRPLFYPDASVLLLC 95
            +Y PT  +     ++  G        K ++  ++D  GQ    +     +   + ++ C
Sbjct: 164 SNYIPTQQDVLRTRVKTTGIVETHFTFKDLYFKMFDVGGQRSERKKWIHCFEGVTAIIFC 223

Query: 96  -----FDVT------------SPNSFDNI-FNRWYPEVNHFCKKVPIIVVGCKTDLCKD- 136
                +D+             S   FD+I  N+W+ E         II+   K DL ++ 
Sbjct: 224 VALSDYDLVLAEDEEMNRMHESMKLFDSICNNKWFTE-------TSIILFLNKKDLFEEK 276

Query: 137 --KSLVNKLRRNGLEPVTYHRGQEM----------ARSVGAVAYLECSARLHDNVHAVFQ 184
             +S +           TY                 +    +      A    NV  VF 
Sbjct: 277 IKRSPLTICYPEYTGSNTYEEAAAYIQCQFEDLNRRKDTKEIYTHFTCATDTKNVQFVFD 336

Query: 185 EAAEVALSSRGRN 197
              +V + +  + 
Sbjct: 337 AVTDVIIKNNLKE 349



 Score = 32.9 bits (74), Expect = 0.10,   Method: Composition-based stats.
 Identities = 8/28 (28%), Positives = 17/28 (60%)

Query: 9  EEAPPGVRSVKVVLVGDGGCGKTSLLMV 36
          E+     + VK++L+G G  GK++++  
Sbjct: 24 EDGEKAAKEVKLLLLGAGESGKSTIVKQ 51


>3T5D-A nrPDB
          Length = 274

 Score = 39.1 bits (90), Expect = 0.001,   Method: Composition-based stats.
 Identities = 20/74 (27%), Positives = 32/74 (43%), Gaps = 10/74 (13%)

Query: 11 APPGV-RSVKVVLVGDGGCGKTSLLMV-FADGAFPESY-------TPTV-FERYMVNLQV 60
           P G      +++VG+ G GK++L+   F    +   Y         TV  E+  V ++ 
Sbjct: 1  GPLGSGFEFTLMVVGESGLGKSTLINSLFLTDLYSPEYPGPSHRIKKTVQVEQSKVLIKE 60

Query: 61 KGKPVHLHIWDTAG 74
           G  + L I DT G
Sbjct: 61 GGVQLLLTIVDTPG 74


>1LNZ-A nrPDB
          Length = 342

 Score = 39.1 bits (90), Expect = 0.001,   Method: Composition-based stats.
 Identities = 33/207 (15%), Positives = 64/207 (30%), Gaps = 35/207 (16%)

Query: 15  VRSVKVV----LVGDGGCGKTSLLMVF--ADGAFPESYTPTVFERYMVNLQVKGKPVHLH 68
           V  +KV+    LVG    GK++LL V   A     + +  T+     +     G+   + 
Sbjct: 152 VLELKVLADVGLVGFPSVGKSTLLSVVSSAKPKIADYHFTTLVPNLGMVETDDGRSFVMA 211

Query: 69  IWD----TAGQDDYDRLRPLFYPDAS---VLLLCFDVT---SPNSFDN--IFNRWYPEVN 116
             D      G      L   F        V++   D++     + +D+    N+   E N
Sbjct: 212 --DLPGLIEGAHQGVGLGHQFLRHIERTRVIVHVIDMSGLEGRDPYDDYLTINQELSEYN 269

Query: 117 HFCKKVPIIVVGCKTDLCKDKSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLH 176
               + P I+V  K D+ +    +   +    +                      SA   
Sbjct: 270 LRLTERPQIIVANKMDMPEAAENLEAFKEKLTD---------------DYPVFPISAVTR 314

Query: 177 DNVHAVFQEAAEVALSSRGRNFWRRIT 203
           + +  +  E A    ++     +    
Sbjct: 315 EGLRELLFEVANQLENTPEFPLYDEEE 341


>4TN1-B nrPDB
          Length = 345

 Score = 39.1 bits (90), Expect = 0.002,   Method: Composition-based stats.
 Identities = 36/225 (16%), Positives = 63/225 (28%), Gaps = 54/225 (24%)

Query: 20  VVLVGDGGCGKTSLLMVF------------ADGAFPESYTPTVFERYMVNLQV--KGK-P 64
             ++G    GKT LL                      +Y P V         V   GK  
Sbjct: 13  CCILGHVRTGKTKLLDKIRQTNVQEGEAGGITQQIGATYFP-VEAIKQKTAVVNKDGKFE 71

Query: 65  VH---LHIWDTAGQDDYDRLRPLFYPDASVLLLCFDVT---SPNSFDNIFNRWYPEVNHF 118
                L I DT G + +  LR       ++ +L  D+     P + +++  R   E    
Sbjct: 72  FKVPGLLIIDTPGHESFSNLRSRGSSLCNIAILVVDIMHGLEPQTIESL--RLLRERK-- 127

Query: 119 CKKVPIIVVGCKTD------------LCKDKSLVNKLRRNGLEPVTYHRGQEMARS-VGA 165
               P +V   K D              +  +L NK  +N           + A     +
Sbjct: 128 ---TPFVVALNKIDRLYGWKKIENNGFRESFALQNKAVQNEFRNRLDQVKLQFAEQGFNS 184

Query: 166 VAYLE------------CSARLHDNVHAVFQEAAEVALSSRGRNF 198
             + E             SA   + +  + +   ++       + 
Sbjct: 185 ELFYENKNFARYVSLVPTSAHTGEGIPDMLKLIVQLCQERMASSL 229


>5YT0-A nrPDB
          Length = 364

 Score = 38.7 bits (89), Expect = 0.002,   Method: Composition-based stats.
 Identities = 32/150 (21%), Positives = 48/150 (32%), Gaps = 27/150 (18%)

Query: 3   AAQAAGEEAPPGVRSVKVVLVGDGGCGKTSLLMVF------------ADGAFPESYTPTV 50
           A    G +    +R   VV++G    GKT+LL                      S  P  
Sbjct: 2   AGDKGGGDGERRLRQPIVVVLGHVDHGKTTLLDKIRRTAVAAKEAGGITQHIGASIVPAD 61

Query: 51  FERYMVNLQVKGKPVHLHI-----WDTAGQDDYDRLRPLFYPDASVLLLCFDVT---SPN 102
               +     K  PV L I      DT G + +  LR      A   +L  D+     P 
Sbjct: 62  VIEKIAEPLKKVIPVKLVIPGLLFIDTPGHELFSNLRRRGGSVADFAILVVDIMEGFKPQ 121

Query: 103 SFDNIFNRWYPEVNHFCKKVPIIVVGCKTD 132
           +++ +      E       VP ++   K D
Sbjct: 122 TYEAL--ELLKERR-----VPFLIAANKID 144


>1ZCB-A nrPDB
          Length = 362

 Score = 38.7 bits (89), Expect = 0.002,   Method: Composition-based stats.
 Identities = 18/70 (25%), Positives = 30/70 (42%), Gaps = 10/70 (14%)

Query: 9  EEAPPGVRSVKVVLVGDGGCGKTSLLMVF-------ADGAFPESYTPTVFER--YMVNLQ 59
          E+     R VK++L+G G  GK++ L           D    E + PT++      + + 
Sbjct: 25 EDGERSARLVKILLLGAGESGKSTFLKQMRIIHGQDFDQRAREEFRPTIYSNVIKGMRVL 84

Query: 60 VKGKPVHLHI 69
          V  +   LHI
Sbjct: 85 VDARE-KLHI 93



 Score = 31.0 bits (69), Expect = 0.40,   Method: Composition-based stats.
 Identities = 31/167 (18%), Positives = 53/167 (31%), Gaps = 37/167 (22%)

Query: 63  KPVHLHIWDTAGQ--DDYDRLRPLFYPDASVLLLC---FD---VTSPNS---------FD 105
           K V   + D  GQ  +            + + L+    FD   +    +         F+
Sbjct: 199 KNVPFKMVDVGGQRSERKRWFECFDSVTSILFLVSSSEFDQVLMEDRQTNRLTESLNIFE 258

Query: 106 NIFNRWYPEVNHFCKKVPIIVVGCKTDLCKDKSLVNK--------------LRRNGLEPV 151
            I N      N     V II+   KTDL ++K  V                LR      V
Sbjct: 259 TIVN------NRVFSNVSIILFLNKTDLLEEKVQVVSIKDYFLEFEGDPHCLRDVQKFLV 312

Query: 152 TYHRGQEMARSVGAVAYLECSARLHDNVHAVFQEAAEVALSSRGRNF 198
              RG+   +    + +   +A   +N+  VF++  +  L    +  
Sbjct: 313 ECFRGKRRDQQQRPLYHHFTTAINTENIRLVFRDVKDTILHDNLKQL 359


>4NCL-A nrPDB
          Length = 457

 Score = 38.7 bits (89), Expect = 0.002,   Method: Composition-based stats.
 Identities = 36/225 (16%), Positives = 63/225 (28%), Gaps = 54/225 (24%)

Query: 20  VVLVGDGGCGKTSLLMVF------------ADGAFPESYTPTVFERYMVNLQV--KGK-P 64
             ++G    GKT LL                      +Y P V         V   GK  
Sbjct: 13  CCILGHVDTGKTKLLDKIRQTNVQEGEAGGITQQIGATYFP-VEAIKQKTAVVNKDGKFE 71

Query: 65  VH---LHIWDTAGQDDYDRLRPLFYPDASVLLLCFDVT---SPNSFDNIFNRWYPEVNHF 118
                L I DT G + +  LR       ++ +L  D+     P + +++  R   E    
Sbjct: 72  FKVPGLLIIDTPGHESFSNLRSRGSSLCNIAILVVDIMHGLEPQTIESL--RLLRERK-- 127

Query: 119 CKKVPIIVVGCKTD------------LCKDKSLVNKLRRNGLEPVTYHRGQEMARS-VGA 165
               P +V   K D              +  +L NK  +N           + A     +
Sbjct: 128 ---TPFVVALNKIDRLYGWKKIENNGFRESFALQNKAVQNEFRNRLDQVKLQFAEQGFNS 184

Query: 166 VAYLE------------CSARLHDNVHAVFQEAAEVALSSRGRNF 198
             + E             SA   + +  + +   ++       + 
Sbjct: 185 ELFYENKNFARYVSLVPTSAHTGEGIPDMLKLIVQLCQERMASSL 229


>4N3G-A nrPDB
          Length = 603

 Score = 38.7 bits (89), Expect = 0.002,   Method: Composition-based stats.
 Identities = 36/225 (16%), Positives = 63/225 (28%), Gaps = 54/225 (24%)

Query: 20  VVLVGDGGCGKTSLLMVF------------ADGAFPESYTPTVFERYMVNLQV--KGK-P 64
             ++G    GKT LL                      +Y P V         V   GK  
Sbjct: 13  CCILGHVDTGKTKLLDKIRQTNVQEGEAGGITQQIGATYFP-VEAIKQKTAVVNKDGKFE 71

Query: 65  VH---LHIWDTAGQDDYDRLRPLFYPDASVLLLCFDVT---SPNSFDNIFNRWYPEVNHF 118
                L I DT G + +  LR       ++ +L  D+     P + +++  R   E    
Sbjct: 72  FKVPGLLIIDTPGHESFSNLRSRGSSLCNIAILVVDIMHGLEPQTIESL--RLLRERK-- 127

Query: 119 CKKVPIIVVGCKTD------------LCKDKSLVNKLRRNGLEPVTYHRGQEMARS-VGA 165
               P +V   K D              +  +L NK  +N           + A     +
Sbjct: 128 ---TPFVVALNKIDRLYGWKKIENNGFRESFALQNKAVQNEFRNRLDQVKLQFAEQGFNS 184

Query: 166 VAYLE------------CSARLHDNVHAVFQEAAEVALSSRGRNF 198
             + E             SA   + +  + +   ++       + 
Sbjct: 185 ELFYENKNFARYVSLVPTSAHTGEGIPDMLKLIVQLCQERMASSL 229


>5FG3-A nrPDB
          Length = 623

 Score = 38.3 bits (88), Expect = 0.002,   Method: Composition-based stats.
 Identities = 32/150 (21%), Positives = 48/150 (32%), Gaps = 27/150 (18%)

Query: 3   AAQAAGEEAPPGVRSVKVVLVGDGGCGKTSLLMVF------------ADGAFPESYTPTV 50
           A    G +    +R   VV++G    GKT+LL                      S  P  
Sbjct: 2   AGDKGGGDGERRLRQPIVVVLGHVDHGKTTLLDKIRRTAVAAKEAGGITQHIGASIVPAD 61

Query: 51  FERYMVNLQVKGKPVHLHI-----WDTAGQDDYDRLRPLFYPDASVLLLCFDVT---SPN 102
               +     K  PV L I      DT G + +  LR      A   +L  D+     P 
Sbjct: 62  VIEKIAEPLKKVIPVKLVIPGLLFIDTPGHELFSNLRRRGGSVADFAILVVDIMEGFKPQ 121

Query: 103 SFDNIFNRWYPEVNHFCKKVPIIVVGCKTD 132
           +++ +      E       VP ++   K D
Sbjct: 122 TYEAL--ELLKERR-----VPFLIAANKID 144


>6OIK-A nrPDB
          Length = 354

 Score = 38.3 bits (88), Expect = 0.002,   Method: Composition-based stats.
 Identities = 33/183 (18%), Positives = 58/183 (31%), Gaps = 31/183 (16%)

Query: 45  SYTPTVFERYMVNLQVKG--------KPVHLHIWDTAGQDDYDRLRPLFYPDASVLLLC- 95
            Y PT  +     ++  G        K +H  ++D  GQ    +     + D + ++ C 
Sbjct: 167 DYQPTEQDILRTRVKTTGIVETHFTFKNLHFRLFDVGGQRSERKKWIHCFEDVTAIIFCV 226

Query: 96  ----FD-VTSPNSFDNIFNRWYPEVNHFCKK-----VPIIVVGCKTDLCKDKSLVNKLR- 144
               +D V   +   N  +      +  C         II+   K DL  +K   + L  
Sbjct: 227 ALSGYDQVLHEDETTNRMHESLMLFDSICNNKFFIDTSIILFLNKKDLFGEKIKKSPLTI 286

Query: 145 --RNGLEPVTYHRGQEM--------ARSVGAVAYLE-CSARLHDNVHAVFQEAAEVALSS 193
                  P TY               RS     Y     A   +N+  VF    ++ +++
Sbjct: 287 CFPEYTGPNTYEDAAAYIQAQFESKNRSPNKEIYCHMTCATDTNNIQVVFDAVTDIIIAN 346

Query: 194 RGR 196
             R
Sbjct: 347 NLR 349



 Score = 35.2 bits (80), Expect = 0.019,   Method: Composition-based stats.
 Identities = 24/100 (24%), Positives = 39/100 (39%), Gaps = 18/100 (18%)

Query: 9   EEAPPGVRSVKVVLVGDGGCGKTSLLMVF-------ADGAFPESYTPTVFERYMVNLQVK 61
           E+     + VK++L+G G  GK++++            G   + Y P V   Y   +Q  
Sbjct: 25  EDGISAAKDVKLLLLGAGESGKSTIVKQMKIIHEDGFSGEDVKQYKPVV---YSNTIQSL 81

Query: 62  GKPVHLHIWDTAGQDDYDRLRPLFYPDASVLLLCFDVTSP 101
              V     DT G +  D+        A   ++C DV S 
Sbjct: 82  AAIVRA--MDTLGIEYGDKE-----RKADAKMVC-DVVSR 113


>2QAG-C nrPDB
          Length = 418

 Score = 37.9 bits (87), Expect = 0.003,   Method: Composition-based stats.
 Identities = 18/67 (26%), Positives = 30/67 (44%), Gaps = 9/67 (13%)

Query: 17 SVKVVLVGDGGCGKTSLLMV-FADGAFPESY-------TPTV-FERYMVNLQVKGKPVHL 67
             +++VG+ G GK++L+   F    +   Y         TV  E+  V ++  G  + L
Sbjct: 31 EFTLMVVGESGLGKSTLINSLFLTDLYSPEYPGPSHRIKKTVQVEQSKVLIKEGGVQLLL 90

Query: 68 HIWDTAG 74
           I DT G
Sbjct: 91 TIVDTPG 97


>5CYO-A nrPDB
          Length = 274

 Score = 37.9 bits (87), Expect = 0.003,   Method: Composition-based stats.
 Identities = 17/68 (25%), Positives = 29/68 (42%), Gaps = 10/68 (14%)

Query: 17 SVKVVLVGDGGCGKTSLLMVFADGAFP-ESYTPTVFERYMVNLQV---------KGKPVH 66
             +++VG  G GK++L+          +S  PT  ER    +++         KG  + 
Sbjct: 4  EFNIMVVGQSGLGKSTLINTLFKSKISRKSVQPTSEERIPKTIEIKSITHDIEEKGVRMK 63

Query: 67 LHIWDTAG 74
          L + DT G
Sbjct: 64 LTVIDTPG 71


>3GEE-A nrPDB
          Length = 476

 Score = 37.9 bits (87), Expect = 0.003,   Method: Composition-based stats.
 Identities = 23/121 (19%), Positives = 39/121 (32%), Gaps = 12/121 (9%)

Query: 21  VLVGDGGCGKTSLLMVFA-DGAFPESYTPTVFERYMVNLQVKGKPVHLHIWDTAGQDDYD 79
           V+ G    GK++LL           S+ P     Y+    +  K     + DTAG  +  
Sbjct: 237 VIAGKPNAGKSTLLNTLLGQERAIVSHMPGTTRDYIEECFIHDKT-MFRLTDTAGLREAG 295

Query: 80  ------RLRPLFYPDASVLLLCF--DVTSPNSFDNIFNRWYPEVNHFCKKVPIIVVGCKT 131
                  +R      A   L+ +  D+ +    D +      E+         + V  K 
Sbjct: 296 EEIEHEGIRRSRMKMAEADLILYLLDLGTERLDDELTE--IRELKAAHPAAKFLTVANKL 353

Query: 132 D 132
           D
Sbjct: 354 D 354


>3H2Y-A nrPDB
          Length = 368

 Score = 37.6 bits (86), Expect = 0.004,   Method: Composition-based stats.
 Identities = 17/89 (19%), Positives = 32/89 (35%), Gaps = 16/89 (17%)

Query: 94  LCFDVTSPNSFDNIFNRWYPEVNHFCKKVPIIVVGCKTDLCKDKSLVNK----------- 142
           L   +     F+     W P ++ F     +++VG K DL       +K           
Sbjct: 72  LVVKIVDIFDFN---GSWLPGLHRFVGNNKVLLVGNKADLIPKSVKHDKVKHWMRYSAKQ 128

Query: 143 --LRRNGLEPVTYHRGQEMARSVGAVAYL 169
             L+   +  ++  +GQ +A    A+ Y 
Sbjct: 129 LGLKPEDVFLISAAKGQGIAELADAIEYY 157


>3LLU-A nrPDB
          Length = 196

 Score = 37.2 bits (85), Expect = 0.005,   Method: Composition-based stats.
 Identities = 18/86 (20%), Positives = 31/86 (36%), Gaps = 10/86 (11%)

Query: 19  KVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMVNLQVKG----KPVHLHIWDTAG 74
           +++L+G    GK+S+  V      P     T+F      +          V+  IWD  G
Sbjct: 22  RILLMGLRRSGKSSIQKVVFHKMSPNE---TLFLESTNKIYKDDISNSSFVNFQIWDFPG 78

Query: 75  QDDYDRLRPLF---YPDASVLLLCFD 97
           Q D+      +   +     L+   D
Sbjct: 79  QMDFFDPTFDYEMIFRGTGALIYVID 104


>2BCJ-Q nrPDB
          Length = 353

 Score = 37.2 bits (85), Expect = 0.005,   Method: Composition-based stats.
 Identities = 28/188 (14%), Positives = 58/188 (30%), Gaps = 34/188 (18%)

Query: 43  PESYTPTVFERYMVNLQVKG--------KPVHLHIWDTAGQ--DDYDRLRPLFYPDASVL 92
             SY PT  +   V +   G        + V   + D  GQ  +    +       + + 
Sbjct: 163 DPSYLPTQQDVLRVRVPTTGIIEYPFDLQSVIFRMVDVGGQRSERRKWIHCFENVTSIMF 222

Query: 93  LLC---FD-----VTSPNSFDNIFNRWYPEVNHFC--KKVPIIVVGCKTDLCKDKSLVNK 142
           L+    +D       + N  +      +  +  +   +   +I+   K DL ++K + + 
Sbjct: 223 LVALSEYDQVLVESDNENRMEE-SKALFRTIITYPWFQNSSVILFLNKKDLLEEKIMYSH 281

Query: 143 LRRNGLEPVTYHRGQEMARSVGAVAYLE-------------CSARLHDNVHAVFQEAAEV 189
           L     E     R  + AR      +++               A   +N+  VF    + 
Sbjct: 282 LVDYFPEYDGPQRDAQAAREFILKMFVDLNPDSDKIIYSHFTCATDTENIRFVFAAVKDT 341

Query: 190 ALSSRGRN 197
            L    + 
Sbjct: 342 ILQLNLKE 349



 Score = 32.9 bits (74), Expect = 0.099,   Method: Composition-based stats.
 Identities = 8/28 (28%), Positives = 16/28 (57%)

Query: 9  EEAPPGVRSVKVVLVGDGGCGKTSLLMV 36
          E+     R +K++L+G G  GK++ +  
Sbjct: 25 EDGERSRRELKLLLLGTGESGKSTFIKQ 52


>4QJ3-A nrPDB
          Length = 379

 Score = 37.2 bits (85), Expect = 0.006,   Method: Composition-based stats.
 Identities = 28/188 (14%), Positives = 58/188 (30%), Gaps = 34/188 (18%)

Query: 43  PESYTPTVFERYMVNLQVKG--------KPVHLHIWDTAGQ--DDYDRLRPLFYPDASVL 92
             SY PT  +   V +   G        + V   + D  GQ  +    +       + + 
Sbjct: 189 DPSYLPTQQDVLRVRVPTTGIIEYPFDLQSVIFRMVDVGGQRSERRKWIHCFENVTSIMF 248

Query: 93  LLC---FD-----VTSPNSFDNIFNRWYPEVNHFC--KKVPIIVVGCKTDLCKDKSLVNK 142
           L+    +D       + N  +      +  +  +   +   +I+   K DL ++K + + 
Sbjct: 249 LVALSEYDQVLVESDNENRMEE-SKALFRTIITYPWFQNSSVILFLNKKDLLEEKIMYSH 307

Query: 143 LRRNGLEPVTYHRGQEMARSVGAVAYLE-------------CSARLHDNVHAVFQEAAEV 189
           L     E     R  + AR      +++               A   +N+  VF    + 
Sbjct: 308 LVDYFPEYDGPQRDAQAAREFILKMFVDLNPDSDKIIYSHFTCATDTENIRFVFAAVKDT 367

Query: 190 ALSSRGRN 197
            L    + 
Sbjct: 368 ILQLNLKE 375



 Score = 31.0 bits (69), Expect = 0.34,   Method: Composition-based stats.
 Identities = 7/21 (33%), Positives = 14/21 (66%)

Query: 16 RSVKVVLVGDGGCGKTSLLMV 36
          R +K++L+G G  GK++ +  
Sbjct: 58 RELKLLLLGTGESGKSTFIKQ 78


>5KH0-A nrPDB
          Length = 396

 Score = 36.8 bits (84), Expect = 0.007,   Method: Composition-based stats.
 Identities = 22/137 (16%), Positives = 46/137 (33%), Gaps = 20/137 (14%)

Query: 20  VVLVGDGGCGKTSLLMVFADGA---FPESYTPTVFERYMVNLQVKGKPVHLHIWDTAGQD 76
           + + G    GK+S +                 T    +         P+ L   DT G D
Sbjct: 11  IAITGRRNVGKSSFMNALIGQEVSIVSNVAGTTTDPVFKSMELSPVGPITLI--DTPGLD 68

Query: 77  DYDRL--------RPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVNHFCKKVPIIVVG 128
           D   L        +   Y     +L+  D+  P +F+    + + E+     ++P  +  
Sbjct: 69  DVGELGIKRIKKAKKSLYRADCGILIVDDI--PGNFEEQIIKLFKEL-----EIPYFIAI 121

Query: 129 CKTDLCKDKSLVNKLRR 145
            K D    +++  + ++
Sbjct: 122 NKIDTIDHENIEKEYKK 138


>5IRR-A nrPDB
          Length = 308

 Score = 36.4 bits (83), Expect = 0.008,   Method: Composition-based stats.
 Identities = 14/41 (34%), Positives = 21/41 (51%), Gaps = 6/41 (14%)

Query: 15 VRSVKVVLVGDGGCGKTSLLMVFAD------GAFPESYTPT 49
           + +K+++VGD G GKT+L+                SYTPT
Sbjct: 24 KKYIKLIVVGDSGLGKTTLIKSLISIPGERLQVHDGSYTPT 64


>4V8Y-CP nrPDB
          Length = 339

 Score = 36.4 bits (83), Expect = 0.009,   Method: Composition-based stats.
 Identities = 31/186 (16%), Positives = 57/186 (30%), Gaps = 30/186 (16%)

Query: 20  VVLVGDGGCGKTSLLMVF------------ADGAFPESYTPTVFERYMVNLQVKGKPVHL 67
             ++G    GKT LL                      +Y P    +    +  + +    
Sbjct: 8   CCILGHVDTGKTKLLDKIRQTNVQGGEAGGITQQIGATYFPIDAIKAKTKVMAEYEKQTF 67

Query: 68  HI-----WDTAGQDDYDRLRPLFYPDASVLLLCFDVT---SPNSFDNIFNRWYPEVNHFC 119
            +      DT G + +  LR       ++ +L  D+       + ++I  +   +     
Sbjct: 68  DVPGLLVIDTPGHESFSNLRSRGSSLCNIAILVIDIMHGLEQQTIESI--KLLRDRK--- 122

Query: 120 KKVPIIVVGCKTD-LCKDKSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDN 178
              P +V   K D L   K++ N   R+     +    +E       +  LE  A    N
Sbjct: 123 --APFVVALNKIDRLYDWKAIPNNSFRDSFAKQSRAVQEEFQSRYSKIQ-LEL-AEQGLN 178

Query: 179 VHAVFQ 184
               FQ
Sbjct: 179 SELYFQ 184


>1TAG-A nrPDB
          Length = 324

 Score = 36.4 bits (83), Expect = 0.009,   Method: Composition-based stats.
 Identities = 29/190 (15%), Positives = 58/190 (30%), Gaps = 44/190 (23%)

Query: 46  YTPTVFERYMVNLQVKG--------KPVHLHIWDTAGQDDYDRLRPLFYPDASVLLLC-- 95
           Y PT  +     ++  G        K ++  ++D  GQ    +     +   + ++    
Sbjct: 137 YVPTEQDVLRSRVKTTGIIETQFSFKDLNFRMFDVGGQRSERKKWIHCFEGVTCIIFIAA 196

Query: 96  ---FD--------VTSPNSFDNIFNRWYPEVNHFCKKVPIIVVGCKTDLCKDKSLVNKLR 144
              +D        V   +   ++FN        +     I++   K D+  +K     L 
Sbjct: 197 LSAYDMVLVEDDEVNRMHESLHLFNSICNH--RYFATTSIVLFLNKKDVFSEKIKKAHLS 254

Query: 145 ---RNGLEPVTYHRGQEMARSVGAVAYLE--------------CSARLHDNVHAVFQEAA 187
               +   P TY      A +   V +LE                A    NV  VF    
Sbjct: 255 ICFPDYNGPNTYED----AGNYIKVQFLELNMRRDVKEIYSHMTCATDTQNVKFVFDAVT 310

Query: 188 EVALSSRGRN 197
           ++ +    ++
Sbjct: 311 DIIIKENLKD 320



 Score = 31.0 bits (69), Expect = 0.35,   Method: Composition-based stats.
 Identities = 8/22 (36%), Positives = 16/22 (72%)

Query: 15 VRSVKVVLVGDGGCGKTSLLMV 36
           R+VK++L+G G  GK++++  
Sbjct: 1  ARTVKLLLLGAGESGKSTIVKQ 22


>4NCF-A nrPDB
          Length = 457

 Score = 36.4 bits (83), Expect = 0.010,   Method: Composition-based stats.
 Identities = 31/186 (16%), Positives = 57/186 (30%), Gaps = 30/186 (16%)

Query: 20  VVLVGDGGCGKTSLLMVF------------ADGAFPESYTPTVFERYMVNLQVKGKPVHL 67
             ++G    GKT LL                      +Y P    +    +  + +    
Sbjct: 13  CCILGHVDTGKTKLLDKIRQTNVQGGEAGGITQQIGATYFPIDAIKAKTKVMAEYEKQTF 72

Query: 68  HI-----WDTAGQDDYDRLRPLFYPDASVLLLCFDVT---SPNSFDNIFNRWYPEVNHFC 119
            +      DT G + +  LR       ++ +L  D+       + ++I  +   +     
Sbjct: 73  DVPGLLVIDTPGHESFSNLRSRGSSLCNIAILVIDIMHGLEQQTIESI--KLLRDRK--- 127

Query: 120 KKVPIIVVGCKTD-LCKDKSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDN 178
              P +V   K D L   K++ N   R+     +    +E       +  LE  A    N
Sbjct: 128 --APFVVALNKIDRLYDWKAIPNNSFRDSFAKQSRAVQEEFQSRYSKIQ-LEL-AEQGLN 183

Query: 179 VHAVFQ 184
               FQ
Sbjct: 184 SELYFQ 189


>3WBI-A nrPDB
          Length = 606

 Score = 36.0 bits (82), Expect = 0.011,   Method: Composition-based stats.
 Identities = 31/186 (16%), Positives = 57/186 (30%), Gaps = 30/186 (16%)

Query: 20  VVLVGDGGCGKTSLLMVF------------ADGAFPESYTPTVFERYMVNLQVKGKPVHL 67
             ++G    GKT LL                      +Y P    +    +  + +    
Sbjct: 12  CCILGHVDTGKTKLLDKIRQTNVQGGEAGGITQQIGATYFPIDAIKAKTKVMAEYEKQTF 71

Query: 68  HI-----WDTAGQDDYDRLRPLFYPDASVLLLCFDVT---SPNSFDNIFNRWYPEVNHFC 119
            +      DT G + +  LR       ++ +L  D+       + ++I  +   +     
Sbjct: 72  DVPGLLVIDTPGHESFSNLRSRGSSLCNIAILVIDIMHGLEQQTIESI--KLLRDRK--- 126

Query: 120 KKVPIIVVGCKTD-LCKDKSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDN 178
              P +V   K D L   K++ N   R+     +    +E       +  LE  A    N
Sbjct: 127 --APFVVALNKIDRLYDWKAIPNNSFRDSFAKQSRAVQEEFQSRYSKIQ-LEL-AEQGLN 182

Query: 179 VHAVFQ 184
               FQ
Sbjct: 183 SELYFQ 188


>4V8Z-CV nrPDB
          Length = 586

 Score = 36.0 bits (82), Expect = 0.012,   Method: Composition-based stats.
 Identities = 31/186 (16%), Positives = 57/186 (30%), Gaps = 30/186 (16%)

Query: 20  VVLVGDGGCGKTSLLMVF------------ADGAFPESYTPTVFERYMVNLQVKGKPVHL 67
             ++G    GKT LL                      +Y P    +    +  + +    
Sbjct: 8   CCILGHVDTGKTKLLDKIRQTNVQGGEAGGITQQIGATYFPIDAIKAKTKVMAEYEKQTF 67

Query: 68  HI-----WDTAGQDDYDRLRPLFYPDASVLLLCFDVT---SPNSFDNIFNRWYPEVNHFC 119
            +      DT G + +  LR       ++ +L  D+       + ++I  +   +     
Sbjct: 68  DVPGLLVIDTPGHESFSNLRSRGSSLCNIAILVIDIMHGLEQQTIESI--KLLRDRK--- 122

Query: 120 KKVPIIVVGCKTD-LCKDKSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDN 178
              P +V   K D L   K++ N   R+     +    +E       +  LE  A    N
Sbjct: 123 --APFVVALNKIDRLYDWKAIPNNSFRDSFAKQSRAVQEEFQSRYSKIQ-LEL-AEQGLN 178

Query: 179 VHAVFQ 184
               FQ
Sbjct: 179 SELYFQ 184


>6OIJ-A nrPDB
          Length = 353

 Score = 35.6 bits (81), Expect = 0.014,   Method: Composition-based stats.
 Identities = 28/185 (15%), Positives = 57/185 (30%), Gaps = 34/185 (18%)

Query: 46  YTPTVFERYMVNLQVKG--------KPVHLHIWDTAGQ--DDYDRLRPLFYPDASVLLLC 95
           Y PT  +   V +   G        + +   + D  GQ  +    +       + + L+ 
Sbjct: 166 YLPTQQDVLRVRVPTTGIIEYPFDLENIIFRMVDVGGQRSERRKWIHCFENVTSIMFLVA 225

Query: 96  ---FD-----VTSPNSFDNIFNRWYPEVNHFC--KKVPIIVVGCKTDLCKDKSLVNKLRR 145
              +D       + N  +      +  +  +   +   +I+   K DL +DK L + L  
Sbjct: 226 LSEYDQVLVESDNENRMEE-SKALFRTIITYPWFQNSSVILFLNKKDLLEDKILYSHLVD 284

Query: 146 NGLEPVTYHRGQEMARSVGAVAYLE-------------CSARLHDNVHAVFQEAAEVALS 192
              E     R  + AR      +++               A   +N+  VF    +  L 
Sbjct: 285 YFPEFDGPQRDAQAAREFILKMFVDLNPDSDKIIYSHFTCATDTENIRFVFAAVKDTILQ 344

Query: 193 SRGRN 197
              + 
Sbjct: 345 LNLKE 349



 Score = 32.2 bits (72), Expect = 0.17,   Method: Composition-based stats.
 Identities = 8/28 (28%), Positives = 16/28 (57%)

Query: 9  EEAPPGVRSVKVVLVGDGGCGKTSLLMV 36
          E+     R +K++L+G G  GK++ +  
Sbjct: 25 EDGEKARRELKLLLLGTGESGKSTFIKQ 52


>6F1T-i nrPDB
          Length = 492

 Score = 35.2 bits (80), Expect = 0.022,   Method: Composition-based stats.
 Identities = 16/90 (17%), Positives = 32/90 (35%), Gaps = 2/90 (2%)

Query: 98  VTSPNSFDNIFNRWYPEVNHFCKKVPIIVVGCKTDLCKDKSLVNKLRRNGLEPVTYHRGQ 157
           +TS +  +N+       V      +P++VV  K D        +  R   L+ +  H  +
Sbjct: 201 LTSGSDEENVALPLGDNVLTHNLGIPVLVVCTKCDAVSVLEKEHDYRDEHLDFIQSHL-R 259

Query: 158 EMARSVGAVAYLECSARLHDNVHAVFQEAA 187
                 GA      S +   N+  +++   
Sbjct: 260 RFCLQYGAALIY-TSVKEEKNLDLLYKYIV 288



 Score = 29.9 bits (66), Expect = 0.84,   Method: Composition-based stats.
 Identities = 26/184 (14%), Positives = 60/184 (32%), Gaps = 18/184 (9%)

Query: 1   MTAAQAAGEEAPPGVRSVKVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMVNLQV 60
           ++          P  +   +++ G+ G GKT+L+         +      +    V+ + 
Sbjct: 40  LSEVSTRARSKLPSGK--NILVFGEDGSGKTTLMTKLQGAEHGKKGRGLEYLYLSVHDED 97

Query: 61  KGKPVHLHIWDTAGQDDYDRLRPLFYPDAS-----VLLLCFDVTSPNSFDNIFNRWYPEV 115
           +      ++W   G D Y +    F   A      +++   D++ P +      +W   +
Sbjct: 98  RDDHTRCNVWILDG-DLYHKGLLKFAVSAESLPETLVIFVADMSRPWTVMESLQKWASVL 156

Query: 116 NHFCKKVPIIVVGCKTDLCKDKSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARL 175
                K+       K    K + L  K  ++  + +    G + +           S   
Sbjct: 157 REHIDKM-------KIPPEKMRELERKFVKDFQDYMEPEEGCQGSPQRRGPL---TSGSD 206

Query: 176 HDNV 179
            +NV
Sbjct: 207 EENV 210


>6F1Y-j nrPDB
          Length = 337

 Score = 35.2 bits (80), Expect = 0.023,   Method: Composition-based stats.
 Identities = 16/90 (17%), Positives = 32/90 (35%), Gaps = 2/90 (2%)

Query: 98  VTSPNSFDNIFNRWYPEVNHFCKKVPIIVVGCKTDLCKDKSLVNKLRRNGLEPVTYHRGQ 157
           +TS +  +N+       V      +P++VV  K D        +  R   L+ +  H  +
Sbjct: 165 LTSGSDEENVALPLGDNVLTHNLGIPVLVVCTKCDAVSVLEKEHDYRDEHLDFIQSHL-R 223

Query: 158 EMARSVGAVAYLECSARLHDNVHAVFQEAA 187
                 GA      S +   N+  +++   
Sbjct: 224 RFCLQYGAALIY-TSVKEEKNLDLLYKYIV 252



 Score = 29.9 bits (66), Expect = 0.85,   Method: Composition-based stats.
 Identities = 26/184 (14%), Positives = 60/184 (32%), Gaps = 18/184 (9%)

Query: 1   MTAAQAAGEEAPPGVRSVKVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMVNLQV 60
           ++          P  +   +++ G+ G GKT+L+         +      +    V+ + 
Sbjct: 4   LSEVSTRARSKLPSGK--NILVFGEDGSGKTTLMTKLQGAEHGKKGRGLEYLYLSVHDED 61

Query: 61  KGKPVHLHIWDTAGQDDYDRLRPLFYPDAS-----VLLLCFDVTSPNSFDNIFNRWYPEV 115
           +      ++W   G D Y +    F   A      +++   D++ P +      +W   +
Sbjct: 62  RDDHTRCNVWILDG-DLYHKGLLKFAVSAESLPETLVIFVADMSRPWTVMESLQKWASVL 120

Query: 116 NHFCKKVPIIVVGCKTDLCKDKSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARL 175
                K+       K    K + L  K  ++  + +    G + +           S   
Sbjct: 121 REHIDKM-------KIPPEKMRELERKFVKDFQDYMEPEEGCQGSPQRRGPL---TSGSD 170

Query: 176 HDNV 179
            +NV
Sbjct: 171 EENV 174


>6D9H-A nrPDB
          Length = 355

 Score = 34.9 bits (79), Expect = 0.024,   Method: Composition-based stats.
 Identities = 33/194 (17%), Positives = 60/194 (30%), Gaps = 48/194 (24%)

Query: 44  ESYTPTVFERYMVNLQVKG--------KPVHLHIWDTAGQDDYDRLRPLFYPDASVLLLC 95
             Y PT  +     ++  G        K +H  ++D   Q    +     +   + ++ C
Sbjct: 166 SDYIPTQQDVLRTRVKTTGIVETHFTFKDLHFKMFDVGAQRSERKKWIHCFEGVTAIIFC 225

Query: 96  -----FDV------------TSPNSFDNI-FNRWYPEVNHFCKKVPIIVVGCKTDLCKDK 137
                +D+             S   FD+I  N+W+           II+   K DL ++K
Sbjct: 226 VALSAYDLVLAEDEEMNRMHASMKLFDSICNNKWFT-------DTSIILFLNKKDLFEEK 278

Query: 138 SLVNKLRRNGLEPV---TYHRGQEMARSVGA-----------VAYLECSARLHDNVHAVF 183
              + L     E      Y       +S                +  CS     NV  VF
Sbjct: 279 ITHSPLTICFPEYTGANKYDEAASYIQSKFEDLNKRKDTKEIYTHFTCS-TDTKNVQFVF 337

Query: 184 QEAAEVALSSRGRN 197
               +V + +  ++
Sbjct: 338 DAVTDVIIKNNLKD 351



 Score = 31.0 bits (69), Expect = 0.35,   Method: Composition-based stats.
 Identities = 9/28 (32%), Positives = 16/28 (57%)

Query: 9  EEAPPGVRSVKVVLVGDGGCGKTSLLMV 36
          E+     R VK++L+G G  GK +++  
Sbjct: 25 EDGEKAAREVKLLLLGAGESGKNTIVKQ 52


>5NON-A nrPDB
          Length = 165

 Score = 34.9 bits (79), Expect = 0.026,   Method: Composition-based stats.
 Identities = 16/36 (44%), Positives = 19/36 (52%), Gaps = 2/36 (5%)

Query: 12 PPGVRSVKVVLVGDGGCGKTSLLMVFADGAFPESYT 47
           PG    K+ ++GDGG G T L M F  G FP  Y 
Sbjct: 45 LPGAFE-KLEIIGDGGVG-TILDMTFVPGEFPHEYK 78


>4DCU-A nrPDB
          Length = 456

 Score = 34.9 bits (79), Expect = 0.026,   Method: Composition-based stats.
 Identities = 26/145 (17%), Positives = 42/145 (28%), Gaps = 19/145 (13%)

Query: 18  VKVVLVGDGGCGKTSLLMVFADGA--FPESYTPTVFERYMVNLQVKGKPVHLHIWDTAG- 74
           ++  L+G    GK+SL+            +   T  +    +     +     I DTAG 
Sbjct: 196 IQFCLIGRPNVGKSSLVNAMLGEERVIVSNVAGTTRDAVDTSFTYNQQE--FVIVDTAGM 253

Query: 75  ---------QDDYDRLRPL-FYPDASVLLLCFDVTSPNSFDNIFNRWYPEVNHFCKKVPI 124
                     + Y  LR L     + V+ +  D        +          H   K  +
Sbjct: 254 RKKGKVYETTEKYSVLRALKAIDRSEVVAVVLDGEEGIIEQDKR---IAGYAHEAGKAVV 310

Query: 125 IVVGCKTDLCKDKSLVNKLRRNGLE 149
           IVV  K D         K     + 
Sbjct: 311 IVV-NKWDAVDKDESTMKEFEENIR 334



 Score = 31.4 bits (70), Expect = 0.28,   Method: Composition-based stats.
 Identities = 20/143 (13%), Positives = 45/143 (31%), Gaps = 14/143 (9%)

Query: 10  EAPPGVRSVK--VVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMVNLQVKGKPVHL 67
             P G    K  V +VG    GK+++    A              R  +    +      
Sbjct: 14  LVPRGSHMGKPVVAIVGRPNVGKSTIFNRIAGERISIVEDTPGVTRDRIYSSAEWLNYDF 73

Query: 68  HIWDTAG--------QDDYDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVNHFC 119
           ++ DT G             +   +   +A V++      +        +    ++ +  
Sbjct: 74  NLIDTGGIDIGDEPFLAQIRQQAEIAMDEADVIIFM---VNGREGVTAADEEVAKILYRT 130

Query: 120 KKVPIIVVGCKTDLCKDKSLVNK 142
           KK P+++   K D  + ++ +  
Sbjct: 131 KK-PVVLAVNKLDNTEMRANIYD 152


>2VNE-A nrPDB
          Length = 201

 Score = 34.9 bits (79), Expect = 0.026,   Method: Composition-based stats.
 Identities = 16/36 (44%), Positives = 19/36 (52%), Gaps = 2/36 (5%)

Query: 12 PPGVRSVKVVLVGDGGCGKTSLLMVFADGAFPESYT 47
           PG    K+ ++GDGG G T L M F  G FP  Y 
Sbjct: 61 LPGAFE-KLEIIGDGGVG-TILDMTFVPGEFPHEYK 94


>2QTH-A nrPDB
          Length = 364

 Score = 34.9 bits (79), Expect = 0.026,   Method: Composition-based stats.
 Identities = 30/188 (15%), Positives = 63/188 (33%), Gaps = 30/188 (15%)

Query: 20  VVLVGDGGCGKTSLLMVFAD-GAFPESYTPTVFERYMVNLQVKGKPVHLHIWDTAGQDD- 77
           + +VG    GKTSL           ++   T        + +  + + L   DT G    
Sbjct: 182 IGIVGYTNSGKTSLFNSLTGLTQKVDTKLFTTMSPKRYAIPINNRKIML--VDTVGFIRG 239

Query: 78  ---------YDRLRPLFYPDASVLLLCFDVTSPNSF--DNIFNRWYPEVNHFCKKVPIIV 126
                    +  L    Y  +  L+L  D T   +   + + + +           PI+V
Sbjct: 240 IPPQIVDAFFVTLSEAKY--SDALILVIDSTFSENLLIETLQSSFEILREIGVSGKPILV 297

Query: 127 VGCKTDLCKDKSLVNKLRRNGLEPVTYHRGQEMARSVGAVAY--LECSARLHDNVHAVFQ 184
              K D       +N      L+ V     +++++ + +  +  +  SA    N+  +  
Sbjct: 298 TLNKID------KINGDLYKKLDLV-----EKLSKELYSPIFDVIPISALKRTNLELLRD 346

Query: 185 EAAEVALS 192
           +  ++A  
Sbjct: 347 KIYQLATQ 354


>6CES-C nrPDB
          Length = 399

 Score = 34.9 bits (79), Expect = 0.027,   Method: Composition-based stats.
 Identities = 18/86 (20%), Positives = 30/86 (34%), Gaps = 10/86 (11%)

Query: 19  KVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMVNLQVKG----KPVHLHIWDTAG 74
           +++L+G    GK S+  V      P     T+F      +          V+  IWD  G
Sbjct: 63  RILLMGLRRSGKNSIQKVVFHKMSPNE---TLFLESTNKIYKDDISNSSFVNFQIWDFPG 119

Query: 75  QDDYDRLRPLF---YPDASVLLLCFD 97
           Q D+      +   +     L+   D
Sbjct: 120 QMDFFDPTFDYEMIFRGTGALIYVID 145


>2Q3F-A nrPDB
          Length = 181

 Score = 34.9 bits (79), Expect = 0.027,   Method: Composition-based stats.
 Identities = 27/183 (14%), Positives = 56/183 (30%), Gaps = 18/183 (9%)

Query: 19  KVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMVNL----QVKGKPVHLHIWDTAG 74
           +++L+G    GK+S+  V      P     T+F      +          V+  IWD  G
Sbjct: 6   RILLMGLRRSGKSSIQKVVFHKMSPNE---TLFLESTNKICREDVSNSSFVNFQIWDFPG 62

Query: 75  QDDYDRLRPLF---YPDASVLLLCFDVTSPNSFDNIFNRWYPEVNH---FCKKVPIIVVG 128
           Q D+      +   +     L+    + S + +     R +  V         +   V  
Sbjct: 63  QIDFFDPTFDYEMIFRGTGALIFV--IDSQDDYMEALARLHLTVTRAYKVNTDINFEVFI 120

Query: 129 CKTDLCKDKSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNVHAVFQEAAE 188
            K D   D   +   R              + +    +++   S     ++   F +  +
Sbjct: 121 HKVDGLSDDHKIETQRDIHQRANDDLADAGLEKIH--LSFYLTS-IYDHSIFEAFSKVVQ 177

Query: 189 VAL 191
             +
Sbjct: 178 KLI 180


>1HEY-A nrPDB
          Length = 128

 Score = 34.9 bits (79), Expect = 0.027,   Method: Composition-based stats.
 Identities = 21/99 (21%), Positives = 37/99 (37%), Gaps = 10/99 (10%)

Query: 14  GVRSVKVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMVNLQVKGKPVHLHIW--- 70
             + +K ++VG+GG GK+++  +  +  F            +  LQ  G    +  W   
Sbjct: 1   ADKELKFLVVGNGGTGKSTVRNLLKELGFNNVEDAEDGVDALNKLQAGGYGFVISDWNMP 60

Query: 71  --DTAGQDDYDRLRPLFYPDASVLLLCFDVTSPNSFDNI 107
             D  G +    +R      A   L    VT+    +NI
Sbjct: 61  NMD--GLELLKTIRA---DGAMSALPVLMVTAEAKKENI 94


>4YMS-J nrPDB
          Length = 240

 Score = 34.5 bits (78), Expect = 0.038,   Method: Composition-based stats.
 Identities = 13/49 (26%), Positives = 25/49 (51%), Gaps = 5/49 (10%)

Query: 20 VVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMVNLQVKGKPVHLH 68
          VV++G  G GK++LL         E   PT  E ++  +++    V+++
Sbjct: 30 VVIIGPSGSGKSTLLR--CINLLEE---PTKGEVFIDGVKINNGKVNIN 73


>1SUL-A nrPDB
          Length = 195

 Score = 34.1 bits (77), Expect = 0.044,   Method: Composition-based stats.
 Identities = 19/126 (15%), Positives = 44/126 (34%), Gaps = 19/126 (15%)

Query: 20  VVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMVNLQVKGKPVHLHIWDTAG----- 74
           + L G    GK+S +    +       +    +   +N  +      LH  D  G     
Sbjct: 26  IALAGRSNVGKSSFINSLINRKNLARTSSKPGKTQTLNFYIINDE--LHFVDVPGYGFAK 83

Query: 75  -----QDDYDRLRPLFYPDAS---VLLLCFDVTSPNSFDNIFNRWYPEVNHFCKKVPIIV 126
                ++ + R+   +         ++   D+    S D++    +  + ++   +P+IV
Sbjct: 84  VSKSEREAWGRMIETYITTREELKAVVQIVDLRHAPSNDDVQMYEF--LKYYG--IPVIV 139

Query: 127 VGCKTD 132
           +  K D
Sbjct: 140 IATKAD 145


>3K53-A nrPDB
          Length = 271

 Score = 34.1 bits (77), Expect = 0.048,   Method: Composition-based stats.
 Identities = 29/174 (16%), Positives = 52/174 (29%), Gaps = 24/174 (13%)

Query: 20  VVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMVNLQVKGKPVHLHIWDTAGQDDYD 79
           V LVG+   GKT++              P V       +    +     + D  G     
Sbjct: 6   VALVGNPNVGKTTIFNALTGLRQHVGNWPGVTVEKKEGIMEYREK-EFLVVDLPGIYSLT 64

Query: 80  R------LRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVNHFCKKVPIIVVGCKTDL 133
                  +   F  D +  ++  D+                     K   II+V  K DL
Sbjct: 65  AHSIDELIARNFILDGNADVIV-DIVDSTCLMRNLFLTLELFEMEVKN--IILVLNKFDL 121

Query: 134 CKDKSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNVHAVFQEAA 187
            K K     +             ++M + +G V  +  +A+  + V  + +  A
Sbjct: 122 LKKKGAKIDI-------------KKMRKELG-VPVIPTNAKKGEGVEELKRMIA 161


>1G7S-A nrPDB
          Length = 594

 Score = 33.7 bits (76), Expect = 0.059,   Method: Composition-based stats.
 Identities = 28/179 (15%), Positives = 51/179 (28%), Gaps = 44/179 (24%)

Query: 20  VVLVGDGGCGKTSLL---------MVFADG--------AFPESYTPTVFERYMVNLQVKG 62
           V ++G    GKT+LL            A G          P      +   ++    ++ 
Sbjct: 8   VSVLGHVDHGKTTLLDHIRGSAVASREAGGITQHIGATEIPMDVIEGICGDFLKKFSIRE 67

Query: 63  KPVHLHIWDTAGQDDYDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVNHFCKKV 122
               L   DT G + +  LR      A + +L  D+     F          +  +  + 
Sbjct: 68  TLPGLFFIDTPGHEAFTTLRKRGGALADLAILIVDIN--EGFKPQTQEALNILRMY--RT 123

Query: 123 PIIVVGCKTDLCKDKSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNVHA 181
           P +V   K D               +     H G+          ++E  ++    V  
Sbjct: 124 PFVVAANKID--------------RIHGWRVHEGR---------PFMETFSKQDIQVQQ 159


>5VAI-A nrPDB
          Length = 380

 Score = 33.3 bits (75), Expect = 0.068,   Method: Composition-based stats.
 Identities = 33/186 (17%), Positives = 56/186 (30%), Gaps = 45/186 (24%)

Query: 54  YMVNLQVKGKPVHLHIWDTAGQDDYDRLRPLFYPDASVLLLCFDVTSPN---SFDNIFNR 110
           +    QV    V+ H++D  GQ D  R     + D + ++     +S N     DN  NR
Sbjct: 194 FETKFQVD--KVNFHMFDVGGQRDERRKWIQCFNDVTAIIFVVASSSYNMVIREDNQTNR 251

Query: 111 WYPEVNHFCK--------KVPIIVVGCKTDLCKDKSLVNKLRRNGLEP----------VT 152
               +N F           + +I+   K DL  +K L  K +     P           T
Sbjct: 252 LQEALNLFKSIWNNRWLRTISVILFLNKQDLLAEKVLAGKSKIEDYFPEFARYTTPEDAT 311

Query: 153 YHRGQEMA---------------------RSVGAVAYLECSARLHDNVHAVFQEAAEVAL 191
              G++                              +    A   +N+  VF +  ++  
Sbjct: 312 PEPGEDPRVTRAKYFIRDEFLRISTASGDGRHYCYPHF-TCAVDTENIRRVFNDCRDIIQ 370

Query: 192 SSRGRN 197
               R 
Sbjct: 371 RMHLRQ 376


>1PUJ-A nrPDB
          Length = 282

 Score = 32.9 bits (74), Expect = 0.087,   Method: Composition-based stats.
 Identities = 14/74 (18%), Positives = 29/74 (39%), Gaps = 15/74 (20%)

Query: 5   QAAGEEAPPGVRSVKVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMVNLQVKGKP 64
           +A G +     R+++ +++G    GK++L+   A             +R    +    + 
Sbjct: 112 RAKGVKP----RAIRALIIGIPNVGKSTLINRLAKKN-----IAKTGDRPG--ITTSQQW 160

Query: 65  VH----LHIWDTAG 74
           V     L + DT G
Sbjct: 161 VKVGKELELLDTPG 174


>4FID-A nrPDB
          Length = 340

 Score = 32.9 bits (74), Expect = 0.11,   Method: Composition-based stats.
 Identities = 38/213 (17%), Positives = 60/213 (28%), Gaps = 56/213 (26%)

Query: 44  ESYTPTVFE-----RYMVNLQVKGKPVH---LHIWDTAGQDDYDRLRPLFYPDASVLLLC 95
           E Y PT  +          +      V     H+ D  GQ    +    F+ D    +  
Sbjct: 132 EDYVPTEEDLIHNRTKTTGIHEYDFVVKDIPFHLIDVGGQRSERKKWVSFFSDVDCAIFV 191

Query: 96  -----FDV-------TSPNSFD-NIFNRWYPEVNHFCKKVPIIVVGCKTDLCKDKSLVNK 142
                +D+       TS  +    +F       N F K    ++   K DL ++K     
Sbjct: 192 TSLAEYDMKLYEDGNTSRLTESIAVFKDIMT--NEFLKGAVKLIFLNKMDLFEEKLTKVP 249

Query: 143 LR-------------------------RNGLEPVTYHRGQEMARSVGAVAYLE------C 171
           L                          +   E +        A   GAV   E       
Sbjct: 250 LNTIFPEYTGGDNAVMGAQYIQQLFTGKLQTEEMNISGADGTANIEGAVN--EKVYTNPT 307

Query: 172 SARLHDNVHAVFQEAAEVALSSRGRNFWRRITQ 204
           +A    N+  VF  A +V + +   N   R T+
Sbjct: 308 NATDGSNIKRVFMLAVDVIMKNMAANGKMRPTK 340



 Score = 29.1 bits (64), Expect = 1.5,   Method: Composition-based stats.
 Identities = 11/33 (33%), Positives = 16/33 (48%), Gaps = 3/33 (9%)

Query: 20 VVLVGDGGCGKTSLLMVFA---DGAFPESYTPT 49
          V+L+G G  GK+++         G FPE    T
Sbjct: 8  VMLLGSGESGKSTIAKQLKILFGGGFPEQERAT 40


>1ZCA-A nrPDB
          Length = 359

 Score = 32.9 bits (74), Expect = 0.11,   Method: Composition-based stats.
 Identities = 18/63 (28%), Positives = 29/63 (46%), Gaps = 12/63 (19%)

Query: 16 RSVKVVLVGDGGCGKTSLL--MVFADGA-FPE----SYTPTVFERYMVNLQVKGKPVHLH 68
          R VK++L+G G  GK++ L  M    G  F +     +  T+F+       +KG  V + 
Sbjct: 34 RLVKILLLGAGESGKSTFLKQMRIIHGREFDQKALLEFRDTIFDN-----ILKGSRVLVD 88

Query: 69 IWD 71
            D
Sbjct: 89 ARD 91



 Score = 27.9 bits (61), Expect = 2.8,   Method: Composition-based stats.
 Identities = 27/192 (14%), Positives = 50/192 (26%), Gaps = 39/192 (20%)

Query: 40  GAFPESYTPTVFERYMVNLQVKG---KPVHLHIWDTAGQDDYDRLRPLFYPDASVLLLCF 96
             FP      +  +    +       K +   + D  GQ    +     +   + +L   
Sbjct: 171 NYFPSKQDILLARKATKGIVEHDFVIKKIPFKMVDVGGQRSQRQKWFQCFDGITSILFMV 230

Query: 97  DVT--------SPNS---------FDNIFNRWYPEVNHFCKKVPIIVVGCKTDLCKDK-- 137
             +           +         F+ I N      N     V II+   K DL  +K  
Sbjct: 231 SSSEYDQVLMEDRRTNRLVESMNIFETIVN------NKLFFNVSIILFLNKMDLLVEKVK 284

Query: 138 --SLVNKLRRNGLEPVTYHRGQEM-------ARSVGAVAYLE--CSARLHDNVHAVFQEA 186
             S+         +P      Q          R   +        +A   +N+  VF   
Sbjct: 285 SVSIKKHFPDFKGDPHRLEDVQRYLVQCFDRKRRNRSKPLFHHFTTAIDTENIRFVFHAV 344

Query: 187 AEVALSSRGRNF 198
            +  L    ++ 
Sbjct: 345 KDTILQENLKDI 356


>4V89-AW nrPDB
          Length = 534

 Score = 32.5 bits (73), Expect = 0.12,   Method: Composition-based stats.
 Identities = 12/68 (17%), Positives = 23/68 (33%), Gaps = 4/68 (5%)

Query: 65  VHLHIWDTAGQDDYDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVNHFCKKVPI 124
             +++ DT G +D+              L+  D       ++   +   EV    +  PI
Sbjct: 82  CLVNLLDTPGHEDFSEDTYRTLTAVDCCLMVIDAAKGV--EDRTRKLM-EVTRL-RDTPI 137

Query: 125 IVVGCKTD 132
           +    K D
Sbjct: 138 LTFMNKLD 145


>1YE8-A nrPDB
          Length = 178

 Score = 32.5 bits (73), Expect = 0.13,   Method: Composition-based stats.
 Identities = 7/22 (31%), Positives = 15/22 (68%)

Query: 18 VKVVLVGDGGCGKTSLLMVFAD 39
          +K+++ G+ G GKT+L+    +
Sbjct: 1  MKIIITGEPGVGKTTLVKKIVE 22


>6HZK-A nrPDB
          Length = 333

 Score = 32.5 bits (73), Expect = 0.13,   Method: Composition-based stats.
 Identities = 12/35 (34%), Positives = 17/35 (48%), Gaps = 4/35 (11%)

Query: 19 KVVLVG---DGGCGKTSLLMVFADGAFPESYTPTV 50
          +VVL+G   D GCGK++ L   A   F       +
Sbjct: 6  RVVLIGVAGDSGCGKSTFLNRLA-DLFGTELMTVI 39


>4KV9-A nrPDB
          Length = 412

 Score = 32.5 bits (73), Expect = 0.13,   Method: Composition-based stats.
 Identities = 14/55 (25%), Positives = 25/55 (45%), Gaps = 3/55 (5%)

Query: 18 VKVVLVGDGGCGKTSLLMVFADGAF---PESYTPTVFERYMVNLQVKGKPVHLHI 69
            ++ VG+ G GK++LL    +  F   P ++  T  +   V   +K   V L +
Sbjct: 42 FNILCVGETGIGKSTLLETLFNQKFDFSPSTHDLTDPKLKAVTYDLKEANVKLKL 96


>5M04-A nrPDB
          Length = 360

 Score = 32.5 bits (73), Expect = 0.14,   Method: Composition-based stats.
 Identities = 12/76 (15%), Positives = 23/76 (30%), Gaps = 17/76 (22%)

Query: 111 WYPEVNHFCKKV---PIIVVGCKTDLCKDKSLVNKLRRNGLEPVTYHRGQEMARSVG-AV 166
              E+  + + +   P  +V  K DL                     + + +A ++G   
Sbjct: 282 IISELEKYSQDLATKPRWLVFNKIDLLDKVEA-------------EEKAKAIAEALGWED 328

Query: 167 AYLECSARLHDNVHAV 182
            Y   SA     V  +
Sbjct: 329 KYYLISAASGLGVKDL 344


>4U00-A nrPDB
          Length = 244

 Score = 32.5 bits (73), Expect = 0.14,   Method: Composition-based stats.
 Identities = 10/48 (20%), Positives = 19/48 (39%), Gaps = 10/48 (20%)

Query: 19 KVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMVNLQVKGKPVH 66
          K+V++G  G GK++L+               + +     + V G  V 
Sbjct: 32 KLVIIGPSGSGKSTLIRTINR----------LEDFQEGEVVVDGLSVK 69


>4CSU-9 nrPDB
          Length = 390

 Score = 32.2 bits (72), Expect = 0.17,   Method: Composition-based stats.
 Identities = 12/76 (15%), Positives = 23/76 (30%), Gaps = 17/76 (22%)

Query: 111 WYPEVNHFCKKV---PIIVVGCKTDLCKDKSLVNKLRRNGLEPVTYHRGQEMARSVG-AV 166
              E+  + + +   P  +V  K DL                     + + +A ++G   
Sbjct: 262 IISELEKYSQDLATKPRWLVFNKIDLLDKVEA-------------EEKAKAIAEALGWED 308

Query: 167 AYLECSARLHDNVHAV 182
            Y   SA     V  +
Sbjct: 309 KYYLISAASGLGVKDL 324


>4KXX-A nrPDB
          Length = 637

 Score = 31.8 bits (71), Expect = 0.20,   Method: Composition-based stats.
 Identities = 19/117 (16%), Positives = 39/117 (33%), Gaps = 20/117 (17%)

Query: 102 NSFDNIFNRWYPEVNHFC-KKVPIIVVGCKT---------------DLCKDKSLVNKLRR 145
           ++F   F R + ++      +  I + G                  DL   +S+      
Sbjct: 387 STFAAFFTRAFDQIRMAAISESNINLCGSHCGVSIGEDGPSQMALEDLAMFRSVPTSTVF 446

Query: 146 NGLEPVTYHRGQEMARSVGAVAYLECSARLH---DNVHAVFQ-EAAEVALSSRGRNF 198
              + V   +  E+A +   + ++  S   +    N +  FQ   A+V L S+    
Sbjct: 447 YPSDGVATEKAVELAANTKGICFIRTSRPENAIIYNNNEDFQVGQAKVVLKSKDDQV 503


>2QU8-A nrPDB
          Length = 228

 Score = 31.8 bits (71), Expect = 0.20,   Method: Composition-based stats.
 Identities = 32/209 (15%), Positives = 64/209 (30%), Gaps = 25/209 (11%)

Query: 10  EAPPGVRSVK--VVLVGDGGCGKTSLLMVFAD-GAFPESYTPTVFERYMVNLQVKGKPVH 66
           +  P +   K  ++L G    GK+S + + +      +SY+ T    Y+ +     K   
Sbjct: 20  QGLPSINPHKKTIILSGAPNVGKSSFMNIVSRANVDVQSYSFTTKNLYVGHF--DHKLNK 77

Query: 67  LHIWDTAGQ-----D-----DYDRLRPLFYPDASVLLLCFDVTSPNSFD-NIFNRWYPEV 115
             I DT G      +     +   +  L + +  V+L   D++             +  +
Sbjct: 78  YQIIDTPGLLDRAFENRNTIEMTTITALAHING-VILFIIDISEQCGLTIKEQINLFYSI 136

Query: 116 NHFCKKVPIIVVGCKTDLCKDKSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARL 175
                   I++   K D C   SL    +            Q +      + +   S   
Sbjct: 137 KSVFSNKSIVIGFNKIDKCNMDSLSIDNKLLIK--------QILDNVKNPIKFSSFSTLT 188

Query: 176 HDNVHAVFQEAAEVALSSRGRNFWRRITQ 204
              V      A E+  + +  +      Q
Sbjct: 189 GVGVEQAKITACELLKNDQAESILLDQEQ 217


>3DEF-A nrPDB
          Length = 262

 Score = 31.4 bits (70), Expect = 0.26,   Method: Composition-based stats.
 Identities = 9/31 (29%), Positives = 17/31 (54%)

Query: 8  GEEAPPGVRSVKVVLVGDGGCGKTSLLMVFA 38
          G+     + S+ V+++G GG GK+S +    
Sbjct: 27 GKLKQKDMNSMTVLVLGKGGVGKSSTVNSLI 57


>2YYZ-A nrPDB
          Length = 359

 Score = 31.4 bits (70), Expect = 0.27,   Method: Composition-based stats.
 Identities = 17/45 (37%), Positives = 23/45 (51%), Gaps = 5/45 (11%)

Query: 20 VVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMVNLQVKGKP 64
          V L+G  GCGKT+ L++ A       Y PT  E Y  ++ V   P
Sbjct: 32 VALLGPSGCGKTTTLLMLAG-----IYKPTSGEIYFDDVLVNDIP 71


>1YR7-A nrPDB
          Length = 262

 Score = 31.4 bits (70), Expect = 0.27,   Method: Composition-based stats.
 Identities = 12/37 (32%), Positives = 19/37 (51%), Gaps = 3/37 (8%)

Query: 14 GVRSVKVVLVGDGGCGKTSLL---MVFADGAFPESYT 47
          G+ S+ VV VG  G GKT+L      + +  +  +Y 
Sbjct: 11 GMASMIVVFVGTAGSGKTTLTGEFGRYLEDNYKVAYV 47


>3ZJC-A nrPDB
          Length = 305

 Score = 31.4 bits (70), Expect = 0.29,   Method: Composition-based stats.
 Identities = 11/25 (44%), Positives = 16/25 (64%)

Query: 8  GEEAPPGVRSVKVVLVGDGGCGKTS 32
          G  A    RS+++VLVG  G GK++
Sbjct: 4  GSMAESEDRSLRIVLVGKTGSGKSA 28


>4Z54-A nrPDB
          Length = 287

 Score = 31.0 bits (69), Expect = 0.35,   Method: Composition-based stats.
 Identities = 14/67 (20%), Positives = 25/67 (37%), Gaps = 10/67 (14%)

Query: 18 VKVVLVGDGGCGKTSLLMVFADGAFP--------ESYTPTVFERYMV--NLQVKGKPVHL 67
            +++VG  G GK++L+                 E   P   E   +   ++  G  + L
Sbjct: 20 FNIMVVGQSGLGKSTLVNTLFKSQVSRKASSWNREEKIPKTVEIKAIGHVIEEGGVKMKL 79

Query: 68 HIWDTAG 74
           + DT G
Sbjct: 80 TVIDTPG 86


>4WQY-BZ nrPDB
          Length = 758

 Score = 31.0 bits (69), Expect = 0.37,   Method: Composition-based stats.
 Identities = 14/67 (20%), Positives = 23/67 (34%), Gaps = 4/67 (5%)

Query: 66  HLHIWDTAGQDDYDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVNHFCKKVPII 125
            ++I DT G  D+              ++ FD  S    +      + +   +  KVP I
Sbjct: 145 RINIIDTPGHVDFTIEVERSMRVLDGAIVVFD--SSQGVEPQSETVWRQAEKY--KVPRI 200

Query: 126 VVGCKTD 132
               K D
Sbjct: 201 AFANKMD 207


>5MKK-A nrPDB
          Length = 611

 Score = 31.0 bits (69), Expect = 0.42,   Method: Composition-based stats.
 Identities = 15/46 (32%), Positives = 20/46 (43%), Gaps = 11/46 (23%)

Query: 19  KVVLVGDGGCGKT---SLLMVFADGAFPESYTPTVFERYMVNLQVK 61
           KV LVG  G GKT   SL+  F        Y P     ++  + V+
Sbjct: 387 KVALVGATGAGKTSVVSLIARF--------YDPQRGCVFLDGVDVR 424


>5IDV-A nrPDB
          Length = 279

 Score = 31.0 bits (69), Expect = 0.43,   Method: Composition-based stats.
 Identities = 12/32 (37%), Positives = 17/32 (53%), Gaps = 2/32 (6%)

Query: 20 VVLVGDGGCGKTSLLMVFADGAFPESYTPTVF 51
          V LVG  G GKTSL+ +     F E  +  ++
Sbjct: 68 VALVGRSGAGKTSLVNMLV--RFQEVSSGQIY 97


>1U0L-A nrPDB
          Length = 301

 Score = 30.6 bits (68), Expect = 0.44,   Method: Composition-based stats.
 Identities = 14/108 (12%), Positives = 33/108 (30%), Gaps = 15/108 (13%)

Query: 75  QDDYDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVNHFCKKVPIIVVGCKTDLC 134
               + L      +   ++L   V  P +   I +++   V     ++  ++V  K DL 
Sbjct: 71  LHRKNLLTKPHVANVDQVILVVTVKMPETSTYIIDKFL--VLAEKNELETVMVINKMDLY 128

Query: 135 KDKSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNVHAV 182
            +  L        +               G    ++ SA+    +  +
Sbjct: 129 DEDDLRKVRELEEIYS-------------GLYPIVKTSAKTGMGIEEL 163


>5C78-A nrPDB
          Length = 564

 Score = 30.6 bits (68), Expect = 0.47,   Method: Composition-based stats.
 Identities = 7/16 (43%), Positives = 13/16 (81%)

Query: 19  KVVLVGDGGCGKTSLL 34
           K+  +G+ GCGK++L+
Sbjct: 377 KIAFIGESGCGKSTLV 392


>1IQP-A nrPDB
          Length = 327

 Score = 30.6 bits (68), Expect = 0.47,   Method: Composition-based stats.
 Identities = 25/165 (15%), Positives = 54/165 (32%), Gaps = 28/165 (16%)

Query: 20  VVLVGDGGCGKTSLLMVFADGAFPESYTPTVFE---RYMVNLQVKGKPVHLHIWDTAGQD 76
           ++  G  G GKT+  +  A   F E++     E        + V  + V           
Sbjct: 49  LLFAGPPGVGKTTAALALARELFGENWRHNFLELNASDERGINVIREKVK---------- 98

Query: 77  DYDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVNHFCKKVPIIVVGC------- 129
           ++ R +P     AS  ++  D     +  +        +  F   V  I+          
Sbjct: 99  EFARTKP--IGGASFKIIFLDEADALT-QDAQQALRRTMEMFSSNVRFILSCNYSSKIIE 155

Query: 130 ----KTDLCKDKSLVNKLRRNGLEPVTYHRGQEMARS-VGAVAYL 169
               +  + + + L ++     L  +  + G E+    + A+ Y+
Sbjct: 156 PIQSRCAIFRFRPLRDEDIAKRLRYIAENEGLELTEEGLQAILYI 200


>1R6B-X nrPDB
          Length = 758

 Score = 30.6 bits (68), Expect = 0.49,   Method: Composition-based stats.
 Identities = 12/36 (33%), Positives = 17/36 (47%), Gaps = 5/36 (13%)

Query: 21  VLVGDGGCGKTS----LLMVFADGAFPESY-TPTVF 51
           +LVG+ G GKT+    L      G  PE     T++
Sbjct: 211 LLVGESGVGKTAIAEGLAWRIVQGDVPEVMADCTIY 246


>6G12-A nrPDB
          Length = 301

 Score = 30.6 bits (68), Expect = 0.50,   Method: Composition-based stats.
 Identities = 12/60 (20%), Positives = 27/60 (45%), Gaps = 3/60 (5%)

Query: 15  VRSVKVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMVNLQVKGKPVHLHIWDTAG 74
            R+++ ++VG    GK++L+   A  +  ++       +    ++V      L + DT G
Sbjct: 125 PRAIRAMIVGIPNVGKSTLINKLAKRSIAQTGNKPGVTKQQQWIKVGNA---LQLLDTPG 181


>6D00-1 nrPDB
          Length = 883

 Score = 30.6 bits (68), Expect = 0.50,   Method: Composition-based stats.
 Identities = 12/35 (34%), Positives = 15/35 (42%), Gaps = 4/35 (11%)

Query: 21  VLVGDGGCGKTS----LLMVFADGAFPESYTPTVF 51
            LVG+ G GKT+    L      G  P S    V+
Sbjct: 203 CLVGEPGVGKTAIAEGLANRIVKGDIPSSLQKKVY 237


>3A1W-A nrPDB
          Length = 168

 Score = 30.6 bits (68), Expect = 0.51,   Method: Composition-based stats.
 Identities = 35/189 (18%), Positives = 65/189 (34%), Gaps = 33/189 (17%)

Query: 11  APPGVRSVKVVLVGDGGCGKTSLLMVFA-DGAFPESYTPTVFERYMVNLQVKGKPVHLHI 69
            P  +  VKV L G    GKTSL         +  ++     E+       KG  ++L  
Sbjct: 1   GPLHM--VKVALAGCPNVGKTSLFNALTGTKQYVANWPGVTVEKKEGVFTYKGYTINLI- 57

Query: 70  WDTAGQDDYD------RLRPLFY--PDASVLLLCFDVTSPNSFDNIFNRWYPEVNHFCKK 121
            D  G           ++   +    DA +++L  D  +P            E+    KK
Sbjct: 58  -DLPGTYSLGYSSIDEKIARDYLLKGDADLVILVADSVNPEQ----SLYLLLEILEMEKK 112

Query: 122 VPIIVVGCKTDLCKDKSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNVHA 181
             +I+     D  + K    K+ R            E+ + +G +  +  S+   + +  
Sbjct: 113 --VILAMTAID--EAKKTGMKIDRY-----------ELQKHLG-IPVVFTSSVTGEGLEE 156

Query: 182 VFQEAAEVA 190
           + ++  E A
Sbjct: 157 LKEKIVEYA 165


>5X4B-A nrPDB
          Length = 162

 Score = 30.6 bits (68), Expect = 0.52,   Method: Composition-based stats.
 Identities = 17/131 (12%), Positives = 42/131 (32%), Gaps = 12/131 (9%)

Query: 20  VVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMVNLQVKGKPVHLHIWDTAG----- 74
           V +VG    GK+++    A              R  +    +      ++ DT G     
Sbjct: 5   VAIVGRPNVGKSTIFNRIAGERISIVEDTPGVTRDRIYSSAEWLNYDFNLIDTGGIDIGD 64

Query: 75  ---QDDYDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVNHFCKKVPIIVVGCKT 131
                   +   +   +A V++      +        +    ++ +  KK P+++   K 
Sbjct: 65  EPFLAQIRQQAEIAMDEADVIIFM---VNGREGVTAADEEVAKILYRTKK-PVVLAVNKL 120

Query: 132 DLCKDKSLVNK 142
           D  + ++ +  
Sbjct: 121 DNTEMRANIYD 131


>6QUZ-B nrPDB
          Length = 599

 Score = 30.2 bits (67), Expect = 0.56,   Method: Composition-based stats.
 Identities = 14/24 (58%), Positives = 15/24 (62%), Gaps = 3/24 (12%)

Query: 19  KVVLVGDGGCGKTS---LLMVFAD 39
           KV LVG  G GKT+   LLM F D
Sbjct: 383 KVALVGPTGSGKTTIVNLLMRFYD 406


>2YV5-A nrPDB
          Length = 302

 Score = 30.2 bits (67), Expect = 0.56,   Method: Composition-based stats.
 Identities = 7/19 (36%), Positives = 10/19 (52%)

Query: 20  VVLVGDGGCGKTSLLMVFA 38
            +L G  G GK+S+L    
Sbjct: 168 CILAGPSGVGKSSILSRLT 186


>6ED3-A nrPDB
          Length = 848

 Score = 30.2 bits (67), Expect = 0.59,   Method: Composition-based stats.
 Identities = 20/70 (28%), Positives = 29/70 (41%), Gaps = 15/70 (21%)

Query: 21  VLVGDGGCGKTS----LLMVFADGAFPESY-TPTV----------FERYMVNLQVKGKPV 65
           VL+G+ G GKT+    L      G  PES    T+            +Y    + + K V
Sbjct: 203 VLIGEPGVGKTAIVEGLAQRIVAGDVPESLRDKTIVALDLGSMVAGSKYRGEFEERLKAV 262

Query: 66  HLHIWDTAGQ 75
              I ++AGQ
Sbjct: 263 LDDIKNSAGQ 272


>3V70-A nrPDB
          Length = 247

 Score = 30.2 bits (67), Expect = 0.61,   Method: Composition-based stats.
 Identities = 15/70 (21%), Positives = 26/70 (37%), Gaps = 3/70 (4%)

Query: 6  AAGEEAP--PGVRSVKVVLVGDGGCGKTSLLMV-FADGAFPESYTPTVFERYMVNLQVKG 62
          ++G E     G  + +++LVG  G GK++          F      T   R       + 
Sbjct: 8  SSGRENLYFQGESTRRLILVGRTGAGKSATGNSILGQRRFFSRLGATSVTRACTTGSRRW 67

Query: 63 KPVHLHIWDT 72
             H+ + DT
Sbjct: 68 DKCHVEVVDT 77


>2WJG-A nrPDB
          Length = 188

 Score = 30.2 bits (67), Expect = 0.62,   Method: Composition-based stats.
 Identities = 19/162 (11%), Positives = 54/162 (33%), Gaps = 21/162 (12%)

Query: 11  APPGVRSVKVVLVGDGGCGKTSLLMVFA-DGAFPESYTPTVFERYMVNLQVKGKPVHLHI 69
               ++S ++ L+G+   GK+++      +  +  ++     E+     +  G+     +
Sbjct: 1   GGSHMKSYEIALIGNPNVGKSTIFNALTGENVYIGNWPGVTVEKKEGEFEYNGE--KFKV 58

Query: 70  WDTAGQDDYDRLRPLFYPD--ASVLL------LCFDVTSPNSFDNIFNRWYPEVNHFCKK 121
            D  G      L      +  A   +      L  ++    + +        ++      
Sbjct: 59  VDLPG---VYSLTANSIDEIIARDYIINEKPDLVVNIVDATALERNL-YLTLQLMEMGAN 114

Query: 122 VPIIVVGCKTDLCKDKSLVNKLRR----NGLEPVTYHRGQEM 159
             +++   K DL K   +   + +     G++ V     ++M
Sbjct: 115 --LLLALNKMDLAKSLGIEIDVDKLEKILGVKVVPLSAAKKM 154


>2GA8-A nrPDB
          Length = 359

 Score = 30.2 bits (67), Expect = 0.62,   Method: Composition-based stats.
 Identities = 11/44 (25%), Positives = 19/44 (43%), Gaps = 2/44 (4%)

Query: 20 VVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMVNLQVKGK 63
          V+LVG  G GK+++          E Y  T    +   ++V  +
Sbjct: 27 VILVGSPGSGKSTIAEELCQ-IINEKY-HTFLSEHPNVIEVNDR 68


>5ZLU-EE nrPDB
          Length = 497

 Score = 30.2 bits (67), Expect = 0.68,   Method: Composition-based stats.
 Identities = 18/91 (19%), Positives = 35/91 (38%), Gaps = 16/91 (17%)

Query: 19  KVVLVGDGGCGKTSLLMVF---------ADGAFPE-SYTPTVFERYMVNLQVKGKPVHLH 68
           ++ LVGD G GK+SLL V              F + ++   +    +  ++ +     L 
Sbjct: 32  RIGLVGDNGAGKSSLLKVLNGEIVLAEATLQRFGDFAHISQLGGIEIETVEDRAMLSRLG 91

Query: 69  IW----DT--AGQDDYDRLRPLFYPDASVLL 93
           +     DT   G++   ++   F      +L
Sbjct: 92  VSNVQNDTMSGGEETRAKIAAAFSQQVHGIL 122



 Score = 28.7 bits (63), Expect = 2.0,   Method: Composition-based stats.
 Identities = 14/48 (29%), Positives = 20/48 (41%)

Query: 19  KVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMVNLQVKGKPVH 66
           KV + G  G GKTSLL + ++ A   + +P     Y      K     
Sbjct: 324 KVAITGSNGTGKTSLLKMISERADGLTISPKAEIGYFTQTGYKFNTHK 371


>5B3F-A nrPDB
          Length = 343

 Score = 30.2 bits (67), Expect = 0.68,   Method: Composition-based stats.
 Identities = 7/31 (22%), Positives = 13/31 (41%), Gaps = 1/31 (3%)

Query: 20 VVLVGDGGCGKTSLLMVFADGAFPESYTPTV 50
          + + GD G GK++         F E    ++
Sbjct: 40 IGVAGDSGSGKSTFT-RAISDIFGEELVSSI 69


>5AR1-A nrPDB
          Length = 303

 Score = 30.2 bits (67), Expect = 0.72,   Method: Composition-based stats.
 Identities = 12/69 (17%), Positives = 27/69 (39%), Gaps = 15/69 (21%)

Query: 20 VVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMVNLQVK--------------GKPV 65
          V++VG  G G+++ +         ++ + T+      + ++               G  +
Sbjct: 30 VMIVGQSGSGRSTFINTLCGQQVVDT-STTILLPTDTSTEIDLQLREETVELEDDEGVKI 88

Query: 66 HLHIWDTAG 74
           L+I DT G
Sbjct: 89 QLNIIDTPG 97


>2PJZ-A nrPDB
          Length = 263

 Score = 29.9 bits (66), Expect = 0.76,   Method: Composition-based stats.
 Identities = 14/61 (22%), Positives = 24/61 (39%), Gaps = 17/61 (27%)

Query: 19 KVVLVGDGGCGKTSLLMV------FADGAFPE-----------SYTPTVFERYMVNLQVK 61
          KV+++G  G GKT+LL        ++   F              Y+  + E Y + + V 
Sbjct: 32 KVIILGPNGSGKTTLLRAISGLLPYSGNIFINGMEVRKIRNYIRYSTNLPEAYEIGVTVN 91

Query: 62 G 62
           
Sbjct: 92 D 92


>4YPN-A nrPDB
          Length = 293

 Score = 29.9 bits (66), Expect = 0.78,   Method: Composition-based stats.
 Identities = 10/14 (71%), Positives = 11/14 (78%)

Query: 20  VVLVGDGGCGKTSL 33
           +VLVG  G GKTSL
Sbjct: 146 LVLVGPPGVGKTSL 159


>4YPL-A nrPDB
          Length = 555

 Score = 29.9 bits (66), Expect = 0.78,   Method: Composition-based stats.
 Identities = 10/14 (71%), Positives = 11/14 (78%)

Query: 20  VVLVGDGGCGKTSL 33
           +VLVG  G GKTSL
Sbjct: 113 LVLVGPPGVGKTSL 126


>3A1U-A nrPDB
          Length = 258

 Score = 29.9 bits (66), Expect = 0.78,   Method: Composition-based stats.
 Identities = 34/182 (18%), Positives = 63/182 (34%), Gaps = 31/182 (17%)

Query: 18  VKVVLVGDGGCGKTSLLMVFA-DGAFPESYTPTVFERYMVNLQVKGKPVHLHIWDTAGQD 76
           VKV L G    GKTSL         +  ++     E+       KG  ++L   D  G  
Sbjct: 6   VKVALAGCPNVGKTSLFNALTGTKQYVANWPGVTVEKKEGVFTYKGYTINLI--DLPGTY 63

Query: 77  DYD------RLRPLFY--PDASVLLLCFDVTSPNSFDNIFNRWYPEVNHFCKKVPIIVVG 128
                    ++   +    DA +++L  D  +P            E+    KK  +I+  
Sbjct: 64  SLGYSSIDEKIARDYLLKGDADLVILVADSVNPEQ----SLYLLLEILEMEKK--VILAM 117

Query: 129 CKTDLCKDKSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNVHAVFQEAAE 188
              D  + K    K+ R            E+ + +G +  +  S+   + +  + ++  E
Sbjct: 118 TAID--EAKKTGMKIDRY-----------ELQKHLG-IPVVFTSSVTGEGLEELKEKIVE 163

Query: 189 VA 190
            A
Sbjct: 164 YA 165


>2IYT-A nrPDB
          Length = 184

 Score = 29.9 bits (66), Expect = 0.78,   Method: Composition-based stats.
 Identities = 15/73 (20%), Positives = 24/73 (32%), Gaps = 6/73 (8%)

Query: 19 KVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMVNLQVKGKPVHLHIWDTAGQDDY 78
          K VLVG  G GK+++    A           V         +        I+ T G+ ++
Sbjct: 4  KAVLVGLPGSGKSTIGRRLAKALGVGLLDTDVAIEQRTGRSI------ADIFATDGEQEF 57

Query: 79 DRLRPLFYPDASV 91
           R+       A  
Sbjct: 58 RRIEEDVVRAALA 70


>4RY2-A nrPDB
          Length = 730

 Score = 29.9 bits (66), Expect = 0.78,   Method: Composition-based stats.
 Identities = 11/47 (23%), Positives = 20/47 (42%), Gaps = 10/47 (21%)

Query: 20  VVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMVNLQVKGKPVH 66
           V +VG+ G GKT+L  +         Y+P   +     + + G  + 
Sbjct: 518 VAIVGESGSGKTTLAKLLM-----NFYSPEKGD-----ILINGHSIK 554


>4Q7L-A nrPDB
          Length = 256

 Score = 29.9 bits (66), Expect = 0.79,   Method: Composition-based stats.
 Identities = 14/24 (58%), Positives = 15/24 (62%), Gaps = 3/24 (12%)

Query: 19 KVVLVGDGGCGKTS---LLMVFAD 39
          KV LVG  G GKT+   LLM F D
Sbjct: 33 KVALVGPTGSGKTTIVNLLMRFYD 56


>6HA8-V nrPDB
          Length = 548

 Score = 29.9 bits (66), Expect = 0.79,   Method: Composition-based stats.
 Identities = 9/17 (52%), Positives = 12/17 (70%)

Query: 19  KVVLVGDGGCGKTSLLM 35
           KV ++G  G GKT+LL 
Sbjct: 325 KVAIIGPNGSGKTTLLN 341


>3B5X-A nrPDB
          Length = 582

 Score = 29.9 bits (66), Expect = 0.82,   Method: Composition-based stats.
 Identities = 8/20 (40%), Positives = 12/20 (60%)

Query: 20  VVLVGDGGCGKTSLLMVFAD 39
           V LVG  G GK+++  +F  
Sbjct: 372 VALVGRSGSGKSTIANLFTR 391


>3GD7-A nrPDB
          Length = 390

 Score = 29.9 bits (66), Expect = 0.85,   Method: Composition-based stats.
 Identities = 21/108 (19%), Positives = 34/108 (31%), Gaps = 28/108 (25%)

Query: 19  KVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMVNLQVKGKPVHLHIWDTAGQDDY 78
           +V L+G  G GK++LL  F           T  E     +Q+ G       WD       
Sbjct: 49  RVGLLGRTGSGKSTLLSAFLR------LLNTEGE-----IQIDGVS-----WD------- 85

Query: 79  DRLRPLFYPDASVLL----LCFDVTSPNSFDNIFNRWYPEVNHFCKKV 122
             +    +  A  ++      F  T   + D        E+     +V
Sbjct: 86  -SITLEQWRKAFGVIPQKVFIFSGTFRKNLDPNAAHSDQEIWKVADEV 132


>1QVR-A nrPDB
          Length = 854

 Score = 29.9 bits (66), Expect = 0.95,   Method: Composition-based stats.
 Identities = 11/28 (39%), Positives = 14/28 (50%), Gaps = 4/28 (14%)

Query: 21  VLVGDGGCGKTS----LLMVFADGAFPE 44
           VL+G+ G GKT+    L      G  PE
Sbjct: 195 VLIGEPGVGKTAIVEGLAQRIVKGDVPE 222


>2NQL-A nrPDB
          Length = 388

 Score = 29.5 bits (65), Expect = 1.0,   Method: Composition-based stats.
 Identities = 7/18 (38%), Positives = 11/18 (61%)

Query: 67  LHIWDTAGQDDYDRLRPL 84
           + +WD AGQ+    +R L
Sbjct: 128 IALWDIAGQEAGKSIRDL 145


>6G2G-A nrPDB
          Length = 310

 Score = 29.5 bits (65), Expect = 1.0,   Method: Composition-based stats.
 Identities = 10/29 (34%), Positives = 16/29 (55%)

Query: 10 EAPPGVRSVKVVLVGDGGCGKTSLLMVFA 38
           +   V+ + +VL G GG GK+S+    A
Sbjct: 1  MSLSQVKHIILVLSGKGGVGKSSVTTQLA 29


>4AC9-A nrPDB
          Length = 482

 Score = 29.5 bits (65), Expect = 1.0,   Method: Composition-based stats.
 Identities = 11/62 (17%), Positives = 22/62 (35%), Gaps = 7/62 (11%)

Query: 121 KVPIIVVGCKTDLCKDKSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNVH 180
            +PIIVV  K+D    + +            + H       ++   + +  SA+    V 
Sbjct: 125 NIPIIVVITKSDNAGTEEIKRTEMIMKSILQSTH-------NLKNSSIIPISAKTGFGVD 177

Query: 181 AV 182
            +
Sbjct: 178 EL 179


>5OFO-C nrPDB
          Length = 871

 Score = 29.5 bits (65), Expect = 1.0,   Method: Composition-based stats.
 Identities = 11/28 (39%), Positives = 15/28 (53%), Gaps = 4/28 (14%)

Query: 21  VLVGDGGCGKTS----LLMVFADGAFPE 44
           VL+G+ G GKT+    L     +G  PE
Sbjct: 207 VLIGEPGVGKTAIVEGLAQRIINGEVPE 234


>5NKM-B nrPDB
          Length = 317

 Score = 29.5 bits (65), Expect = 1.1,   Method: Composition-based stats.
 Identities = 13/50 (26%), Positives = 23/50 (46%), Gaps = 2/50 (4%)

Query: 23 VGDGGCGKTSLLMVFADGAFPESYTPTVF--ERYMVNLQVKGKPVHLHIW 70
          +G  G GK++LL + A     + Y   VF       N Q + + + + I+
Sbjct: 34 IGPQGAGKSTLLSMLAGNNSRQMYREYVFRPVSREANEQSRHQTIQIDIY 83


>4CIU-A nrPDB
          Length = 727

 Score = 29.5 bits (65), Expect = 1.1,   Method: Composition-based stats.
 Identities = 11/28 (39%), Positives = 15/28 (53%), Gaps = 4/28 (14%)

Query: 21 VLVGDGGCGKTS----LLMVFADGAFPE 44
          VL+G+ G GKT+    L     +G  PE
Sbjct: 61 VLIGEPGVGKTAIVEGLAQRIINGEVPE 88


>6FT6-s nrPDB
          Length = 520

 Score = 29.5 bits (65), Expect = 1.1,   Method: Composition-based stats.
 Identities = 13/56 (23%), Positives = 22/56 (39%), Gaps = 3/56 (5%)

Query: 78  YDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVNHFCKKVPIIVVGCKTDL 133
           YD++       + V+L   D   P S     +R   E     +   +I++  K DL
Sbjct: 165 YDKIFKSVIDASDVILYVLDARDPES---TRSRKVEEAVLQSQGKRLILILNKVDL 217


>3J3U-A nrPDB
          Length = 810

 Score = 29.5 bits (65), Expect = 1.1,   Method: Composition-based stats.
 Identities = 12/45 (26%), Positives = 17/45 (37%), Gaps = 1/45 (2%)

Query: 21  VLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMVNLQVKGKPV 65
           VL+G+ G GKT++    A         P +     V     G  V
Sbjct: 205 VLIGEPGVGKTAIAEGLAQQIINNE-VPEILRDKRVMTLDMGTVV 248


>5H7J-A nrPDB
          Length = 743

 Score = 29.5 bits (65), Expect = 1.1,   Method: Composition-based stats.
 Identities = 21/126 (16%), Positives = 37/126 (29%), Gaps = 29/126 (23%)

Query: 29  GKTSLLMVFADGA---------------FPESYTP---TV-FERYMVNLQVKGKPVHLHI 69
           GKT+L      GA               F E       T+      +    +GK   +++
Sbjct: 36  GKTTLSDNLLAGAGMISEELAGKQLVLDFDEQEQARGITINAANVSMVHNYEGKDYLINL 95

Query: 70  WDTAGQDDYDRLRPLFYPDASVLLLCFDVTS---PNSFDNIFNRWYPEVNHFCKKVPIIV 126
            DT G  D+             +++  D      P +   +       V       P++ 
Sbjct: 96  IDTPGHVDFGGDVTRAMRAIDGVIIVVDAVEGVMPQTETVVRQALREYVK------PVLF 149

Query: 127 VGCKTD 132
           +  K D
Sbjct: 150 I-NKVD 154


>4YDS-A nrPDB
          Length = 228

 Score = 29.5 bits (65), Expect = 1.1,   Method: Composition-based stats.
 Identities = 12/53 (22%), Positives = 22/53 (41%), Gaps = 4/53 (7%)

Query: 20 VVLVGDGGCGKTSLLMVFADGAFPES---YTPTVFERYMVNLQVKGKPVHLHI 69
          +++ GD G GK+ L   F  G        Y  T  +    +  +K K + + +
Sbjct: 23 IMIEGDHGTGKSVLSAQFVLGFLLSDKKGYVITTEQT-TKDYLIKMKEIKIDL 74


>1JBK-A nrPDB
          Length = 195

 Score = 29.5 bits (65), Expect = 1.2,   Method: Composition-based stats.
 Identities = 11/28 (39%), Positives = 15/28 (53%), Gaps = 4/28 (14%)

Query: 21 VLVGDGGCGKTS----LLMVFADGAFPE 44
          VL+G+ G GKT+    L     +G  PE
Sbjct: 47 VLIGEPGVGKTAIVEGLAQRIINGEVPE 74


>6EM8-A nrPDB
          Length = 818

 Score = 29.5 bits (65), Expect = 1.2,   Method: Composition-based stats.
 Identities = 10/39 (25%), Positives = 20/39 (51%)

Query: 21  VLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMVNLQ 59
           VL+G+ G GKT++    A          T+ ++ +++L 
Sbjct: 205 VLIGEPGVGKTAIAEGLAQAIVNNEVPETLKDKRVMSLD 243


>5MRE-WW nrPDB
          Length = 401

 Score = 29.5 bits (65), Expect = 1.2,   Method: Composition-based stats.
 Identities = 8/18 (44%), Positives = 11/18 (61%)

Query: 19  KVVLVGDGGCGKTSLLMV 36
           K ++ G+ G GKT LL  
Sbjct: 96  KFIITGEPGVGKTVLLSQ 113


>2IW3-A nrPDB
          Length = 986

 Score = 29.5 bits (65), Expect = 1.2,   Method: Composition-based stats.
 Identities = 10/39 (25%), Positives = 17/39 (43%), Gaps = 5/39 (12%)

Query: 19  KVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMVN 57
           ++ ++G  G GK++L+ V           PT  E Y   
Sbjct: 701 RIAVIGPNGAGKSTLINVLTG-----ELLPTSGEVYTHE 734


>5VHD-D nrPDB
          Length = 870

 Score = 29.5 bits (65), Expect = 1.2,   Method: Composition-based stats.
 Identities = 9/24 (37%), Positives = 14/24 (58%)

Query: 21  VLVGDGGCGKTSLLMVFADGAFPE 44
           V+ G+ GCGKT+ +  F    + E
Sbjct: 80  VISGETGCGKTTQVTQFILDNYIE 103


>4HSE-A nrPDB
          Length = 397

 Score = 29.1 bits (64), Expect = 1.3,   Method: Composition-based stats.
 Identities = 11/28 (39%), Positives = 14/28 (50%), Gaps = 4/28 (14%)

Query: 21 VLVGDGGCGKTS----LLMVFADGAFPE 44
          VL+G+ G GKT+    L      G  PE
Sbjct: 58 VLIGEPGVGKTAIVEGLAQRIVKGDVPE 85


>6EMW-E nrPDB
          Length = 181

 Score = 29.1 bits (64), Expect = 1.3,   Method: Composition-based stats.
 Identities = 10/39 (25%), Positives = 20/39 (51%)

Query: 21 VLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMVNLQ 59
          VL+G+ G GKT++    A          T+ ++ +++L 
Sbjct: 44 VLIGEPGVGKTAIAEGLAQAIVNNEVPETLKDKRVMSLD 82


>5OCH-A nrPDB
          Length = 612

 Score = 29.1 bits (64), Expect = 1.3,   Method: Composition-based stats.
 Identities = 19/58 (32%), Positives = 23/58 (39%), Gaps = 19/58 (32%)

Query: 12  PPGVRSVKVVLVGDGGCGKT---SLLMVFADGAFPESYTPTVFERYMVNLQVKGKPVH 66
           PPG     V LVG  G GKT   SLL  F        Y PT        + + G+ + 
Sbjct: 389 PPGKI---VALVGQSGGGKTTVASLLERF--------YDPTAG-----VVMLDGRDLR 430


>3D0O-A nrPDB
          Length = 317

 Score = 29.1 bits (64), Expect = 1.3,   Method: Composition-based stats.
 Identities = 11/53 (20%), Positives = 22/53 (41%), Gaps = 10/53 (18%)

Query: 19 KVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMVNLQVKGKPVHLHIWD 71
          KVVL+G+G  G +S      + +  +          +V + +  + V   + D
Sbjct: 8  KVVLIGNGAVG-SSYAFSLVNQSIVDE---------LVIIDLDTEKVRGDVMD 50


>6O81-S nrPDB
          Length = 472

 Score = 29.1 bits (64), Expect = 1.3,   Method: Composition-based stats.
 Identities = 14/91 (15%), Positives = 31/91 (34%), Gaps = 16/91 (17%)

Query: 101 PNSFDNIFNRWYPEVNHFCKKVPIIVVGCKTDLCKDKSLVNKLRRNGLEPV-TYHRGQEM 159
           P + +++      ++ H      I+++  K DL K+     +  +       T   G   
Sbjct: 168 PQTSEHLAAIEIMKLKH------ILILQNKIDLVKESQAKEQYEQILAFVQGTVAEG--- 218

Query: 160 ARSVGAVAYLECSARLHDNVHAVFQEAAEVA 190
                    +  SA+L  N+  V +   +  
Sbjct: 219 ------APIIPISAQLKYNIEVVCEYIVKKI 243


>6FEC-S nrPDB
          Length = 422

 Score = 29.1 bits (64), Expect = 1.3,   Method: Composition-based stats.
 Identities = 14/91 (15%), Positives = 31/91 (34%), Gaps = 16/91 (17%)

Query: 101 PNSFDNIFNRWYPEVNHFCKKVPIIVVGCKTDLCKDKSLVNKLRRNGLEPV-TYHRGQEM 159
           P + +++      ++ H      I+++  K DL K+     +  +       T   G   
Sbjct: 130 PQTSEHLAAIEIMKLKH------ILILQNKIDLVKESQAKEQYEQILAFVQGTVAEG--- 180

Query: 160 ARSVGAVAYLECSARLHDNVHAVFQEAAEVA 190
                    +  SA+L  N+  V +   +  
Sbjct: 181 ------APIIPISAQLKYNIEVVCEYIVKKI 205


>4MKI-B nrPDB
          Length = 298

 Score = 29.1 bits (64), Expect = 1.3,   Method: Composition-based stats.
 Identities = 11/48 (22%), Positives = 21/48 (43%), Gaps = 5/48 (10%)

Query: 20 VVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMVNLQVKGKPVHL 67
          V ++G  G GK++L+             P+  + Y+  + +  K V L
Sbjct: 40 VGIIGHTGSGKSTLIQQL-----NGLLKPSKGKIYINGIDITDKKVSL 82


>1NI3-A nrPDB
          Length = 392

 Score = 29.1 bits (64), Expect = 1.3,   Method: Composition-based stats.
 Identities = 13/83 (15%), Positives = 26/83 (31%), Gaps = 13/83 (15%)

Query: 18 VKVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMVNLQVKGKPVHLHIWDTAGQDD 77
          +K  +VG    GK++                     Y     +  +   + + D    + 
Sbjct: 21 LKTGIVGMPNVGKSTFFRAITKSVLGNP------ANYPY-ATIDPEEAKVAVPD----ER 69

Query: 78 YDRLRPLFYPDAS--VLLLCFDV 98
          +D L   + P +     L  FD+
Sbjct: 70 FDWLCEAYKPKSRVPAFLTVFDI 92


>1IRQ-A nrPDB
          Length = 71

 Score = 29.1 bits (64), Expect = 1.3,   Method: Composition-based stats.
 Identities = 12/75 (16%), Positives = 27/75 (36%), Gaps = 4/75 (5%)

Query: 125 IVVGCKTDLCKDKSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNVHAVFQ 184
           ++VG    L   K+  N    +  + +   +   +   +  +  +E  A+   NV  V  
Sbjct: 1   MIVGN---LGAQKAKRNDTPISAKKDIMGDKTVRVRADLHHIIKIET-AKNGGNVKEVMD 56

Query: 185 EAAEVALSSRGRNFW 199
           +A E  +     +  
Sbjct: 57  QALEEYIRKYLPDKL 71


>3PXG-A nrPDB
          Length = 468

 Score = 29.1 bits (64), Expect = 1.3,   Method: Composition-based stats.
 Identities = 11/46 (23%), Positives = 16/46 (34%), Gaps = 1/46 (2%)

Query: 21  VLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMVNLQVKGKPVH 66
           VL+G+ G GKT++    A         P +     V     G    
Sbjct: 205 VLIGEPGVGKTAIAEGLAQQIINNE-VPEILRDKRVMTLDMGTKYR 249


>5EE0-A nrPDB
          Length = 395

 Score = 29.1 bits (64), Expect = 1.3,   Method: Composition-based stats.
 Identities = 13/74 (17%), Positives = 28/74 (37%), Gaps = 12/74 (16%)

Query: 18 VKVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMVNLQVKGKPVHLHIWDTAGQDD 77
          +K+ +VG    GK++   +    + P    P           +      +++ D    + 
Sbjct: 26 LKIGIVGLPNVGKSTFFNIVTKLSIPAENFP--------FCTIDPNEARVYVPD----ER 73

Query: 78 YDRLRPLFYPDASV 91
          +D L  L+ P + V
Sbjct: 74 FDWLCQLYKPKSEV 87


>1UDX-A nrPDB
          Length = 416

 Score = 29.1 bits (64), Expect = 1.3,   Method: Composition-based stats.
 Identities = 36/205 (17%), Positives = 57/205 (27%), Gaps = 40/205 (19%)

Query: 5   QAAGEEAPPGVRSVKVVLVGDGG------CGKTSLLMVFADG--AFPESYTPTVFERYMV 56
             AGEE       ++++L+ D G       GK+SLL                T+     V
Sbjct: 139 AEAGEEGEKRRLRLELMLIADVGLVGYPNAGKSSLLAAMTRAHPKIAPYPFTTLSPNLGV 198

Query: 57  NLQVKGKPVHLHIWD----TAGQDDYDRLRPLFYPD---ASVLLLCFDVTSPNSFDNIFN 109
               + +   L   D      G  +   L   F        VLL   D            
Sbjct: 199 VEVSEEERFTLA--DIPGIIEGASEGKGLGLEFLRHIARTRVLLYVLDAADEP--LKTLE 254

Query: 110 RWYPEVNHFCKKV---PIIVVGCKTDLCKDKSLVNKLRRNGLEPVTYHRGQEMARSVGAV 166
               EV  +   +   P +V   K DL +++++                   +AR    +
Sbjct: 255 TLRKEVGAYDPALLRRPSLVALNKVDLLEEEAVKAL-------------ADALARE--GL 299

Query: 167 AYLECSARLHDN---VHAVFQEAAE 188
           A L  SA        +         
Sbjct: 300 AVLPVSALTGAGLPALKEALHALVR 324


>3PXI-A nrPDB
          Length = 758

 Score = 29.1 bits (64), Expect = 1.4,   Method: Composition-based stats.
 Identities = 11/46 (23%), Positives = 16/46 (34%), Gaps = 1/46 (2%)

Query: 21  VLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMVNLQVKGKPVH 66
           VL+G+ G GKT++    A         P +     V     G    
Sbjct: 205 VLIGEPGVGKTAIAEGLAQQIINNE-VPEILRDKRVMTLDMGTKYR 249


>2OHF-A nrPDB
          Length = 396

 Score = 29.1 bits (64), Expect = 1.4,   Method: Composition-based stats.
 Identities = 18/98 (18%), Positives = 34/98 (34%), Gaps = 20/98 (20%)

Query: 8  GEEAPPGV----RSVKVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMVNLQVKGK 63
          G + PP +     S+K+ +VG    GK++   V  +        P           +   
Sbjct: 9  GIKPPPIIGRFGTSLKIGIVGLPNVGKSTFFNVLTNSQASAENFP--------FCTIDPN 60

Query: 64 PVHLHIWDTAGQDDYDRLRPLFYPDAS---VLLLCFDV 98
             + + D    + +D L   ++  AS     L   D+
Sbjct: 61 ESRVPVPD----ERFDFL-CQYHKPASKIPAFLNVVDI 93


>3LLM-A nrPDB
          Length = 235

 Score = 29.1 bits (64), Expect = 1.4,   Method: Composition-based stats.
 Identities = 9/26 (34%), Positives = 15/26 (57%)

Query: 20  VVLVGDGGCGKTSLLMVFADGAFPES 45
           V++ G  GCGKT+ +  F    F ++
Sbjct: 79  VIIRGATGCGKTTQVPQFILDDFIQN 104


>4HZI-A nrPDB
          Length = 294

 Score = 29.1 bits (64), Expect = 1.4,   Method: Composition-based stats.
 Identities = 14/68 (20%), Positives = 30/68 (44%), Gaps = 8/68 (11%)

Query: 15  VRSVK----VVLVGDGGCGKTSLLMVFADGAFPESYTPTV--FERYMVNLQVKGKPVHLH 68
              +K     VL+G  G GK++L+     G    + + T+  F+     + ++     + 
Sbjct: 54  SFEIKTNEHCVLLGRNGAGKSTLVN-LIYG-MIWATSGTIRLFQETYGEIAIQDLRKRIG 111

Query: 69  IWDTAGQD 76
           I D++ Q+
Sbjct: 112 ILDSSQQE 119


>3PV0-A nrPDB
          Length = 381

 Score = 29.1 bits (64), Expect = 1.4,   Method: Composition-based stats.
 Identities = 10/15 (66%), Positives = 12/15 (80%)

Query: 20 VVLVGDGGCGKTSLL 34
          VV VG  GCGK++LL
Sbjct: 32 VVFVGPSGCGKSTLL 46


>5H7K-A nrPDB
          Length = 397

 Score = 29.1 bits (64), Expect = 1.5,   Method: Composition-based stats.
 Identities = 12/75 (16%), Positives = 25/75 (33%), Gaps = 10/75 (13%)

Query: 61  KGKPVHLHIWDTAGQDDYDRLRPLFYPDASVLLLCFDVTS---PNSFDNIFNRWYPEVNH 117
           +GK   +++ DT G  D+             +++  D      P +   +       V  
Sbjct: 87  EGKDYLINLIDTPGHVDFGGDVTRAMRAIDGVIIVVDAVEGVMPQTETVVRQALREYVK- 145

Query: 118 FCKKVPIIVVGCKTD 132
                P++ +  K D
Sbjct: 146 -----PVLFI-NKVD 154


>2RGK-A nrPDB
          Length = 421

 Score = 29.1 bits (64), Expect = 1.5,   Method: Composition-based stats.
 Identities = 10/56 (17%), Positives = 15/56 (26%), Gaps = 10/56 (17%)

Query: 67  LHIWDTA--GQDDYDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVNHFCK 120
           L  WD A    ++Y              L+ +DVT          +W         
Sbjct: 155 LESWDEAFSKTEEYRG-GNANMHAVEAFLIVYDVTH-------DKKWLDRAIRVAS 202


>2P8Y-T nrPDB
          Length = 842

 Score = 29.1 bits (64), Expect = 1.5,   Method: Composition-based stats.
 Identities = 13/106 (12%), Positives = 31/106 (29%), Gaps = 12/106 (11%)

Query: 51  FERYMVNLQVKGKPVHLHIWDTAGQDDYDRLRPLFYPDASVLLLCFDVTSP---NSFDNI 107
            +   +  +  G    +++ D+ G  D+              L+  D        +   +
Sbjct: 84  EDVKEIKQKTDGNSFLINLIDSPGHVDFSSEVTAALRVTDGALVVVDTIEGVCVQTETVL 143

Query: 108 FNRWYPEVNHFCKKVPIIVVGCKTD--LCKDKSLVNKLRRNGLEPV 151
                  +       P++V+  K D  L + +     L +     V
Sbjct: 144 RQALGERIK------PVVVI-NKVDRALLELQVSKEDLYQTFARTV 182


>1ZE1-A nrPDB
          Length = 309

 Score = 29.1 bits (64), Expect = 1.5,   Method: Composition-based stats.
 Identities = 12/64 (18%), Positives = 23/64 (35%), Gaps = 3/64 (4%)

Query: 110 RWYPEVNHFCKKVPIIVVGCKTDLCKDKSLVNKLRRNGLEPVTYHRGQ--EMARSVGAVA 167
            W P V    +   +I+ G +  L   K      +   +  V    G+   +A +    +
Sbjct: 227 EWLPRVVVHQESTKMILNGSQIHLEMLKEWDGFKKGEVVR-VFNEEGRLLALAEAERNSS 285

Query: 168 YLEC 171
           +LE 
Sbjct: 286 FLET 289


>3VX4-A nrPDB
          Length = 273

 Score = 29.1 bits (64), Expect = 1.5,   Method: Composition-based stats.
 Identities = 10/17 (58%), Positives = 11/17 (64%)

Query: 19 KVVLVGDGGCGKTSLLM 35
          KV LVG  G GKT+L  
Sbjct: 63 KVSLVGASGSGKTTLAK 79


>3LXX-A nrPDB
          Length = 239

 Score = 29.1 bits (64), Expect = 1.5,   Method: Composition-based stats.
 Identities = 9/26 (34%), Positives = 16/26 (61%), Gaps = 1/26 (3%)

Query: 7  AGEEAPPGVRSVKVVLVGDGGCGKTS 32
           G + P   + +++VLVG  G GK++
Sbjct: 20 PGRQEPRNSQ-LRIVLVGKTGAGKSA 44


>3FVQ-A nrPDB
          Length = 359

 Score = 29.1 bits (64), Expect = 1.5,   Method: Composition-based stats.
 Identities = 9/19 (47%), Positives = 13/19 (68%)

Query: 20 VVLVGDGGCGKTSLLMVFA 38
          + ++G  GCGKT+LL   A
Sbjct: 33 LFIIGASGCGKTTLLRCLA 51


>1H65-A nrPDB
          Length = 270

 Score = 29.1 bits (64), Expect = 1.5,   Method: Composition-based stats.
 Identities = 15/68 (22%), Positives = 24/68 (35%)

Query: 8  GEEAPPGVRSVKVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMVNLQVKGKPVHL 67
          G      V S+ ++++G GG GK+S +                     V +        L
Sbjct: 30 GNLKQEDVNSLTILVMGKGGVGKSSTVNSIIGERVVSISPFQSEGPRPVMVSRSRAGFTL 89

Query: 68 HIWDTAGQ 75
          +I DT G 
Sbjct: 90 NIIDTPGL 97


>6H7G-A nrPDB
          Length = 346

 Score = 29.1 bits (64), Expect = 1.5,   Method: Composition-based stats.
 Identities = 8/29 (27%), Positives = 14/29 (48%), Gaps = 3/29 (10%)

Query: 14 GVRSVKVVLVG---DGGCGKTSLLMVFAD 39
           +   K V++G   D GCGK++ +     
Sbjct: 1  HMDKDKTVVIGLAADSGCGKSTFMRRMTS 29


>6I3O-A nrPDB
          Length = 677

 Score = 29.1 bits (64), Expect = 1.6,   Method: Composition-based stats.
 Identities = 6/19 (31%), Positives = 13/19 (68%)

Query: 20 VVLVGDGGCGKTSLLMVFA 38
          +++VG+ G GKT+ +  + 
Sbjct: 31 LIVVGETGSGKTTQVTQYL 49


>5D4W-A nrPDB
          Length = 926

 Score = 29.1 bits (64), Expect = 1.6,   Method: Composition-based stats.
 Identities = 7/14 (50%), Positives = 12/14 (85%)

Query: 21  VLVGDGGCGKTSLL 34
           VL+G+ G GKT+++
Sbjct: 220 VLIGEPGVGKTTIV 233


>4MYH-A nrPDB
          Length = 598

 Score = 29.1 bits (64), Expect = 1.6,   Method: Composition-based stats.
 Identities = 11/51 (21%), Positives = 19/51 (37%), Gaps = 16/51 (31%)

Query: 19  KVVLVGDGGCGKTS---LLMVFADGAFPESYTPTVFERYMVNLQVKGKPVH 66
           K  +VG  G GK++   L+  F        Y P         + + G+ + 
Sbjct: 367 KTAIVGSSGSGKSTILKLVFRF--------YDPESG-----RILINGRDIK 404


>2GZA-A nrPDB
          Length = 361

 Score = 29.1 bits (64), Expect = 1.6,   Method: Composition-based stats.
 Identities = 13/49 (26%), Positives = 22/49 (44%), Gaps = 2/49 (4%)

Query: 20  VVLVGDGGCGKTSLLMVFADG-AFPESYTPTVFERYMVNLQVKGKPVHL 67
           +V+ G+ G GKT+L+        F +    T+ +   + L      VHL
Sbjct: 178 IVVAGETGSGKTTLMKALMQEIPFDQRLI-TIEDVPELFLPDHPNHVHL 225


>1WXQ-A nrPDB
          Length = 397

 Score = 29.1 bits (64), Expect = 1.6,   Method: Composition-based stats.
 Identities = 14/75 (18%), Positives = 28/75 (37%), Gaps = 13/75 (17%)

Query: 108 FNRW-YPEVNHFCKKV-----PIIVVGCKTDLCKD---KSLVNKLRRNGLEPVTYHRGQE 158
             +W   ++  F  ++     P+++   K D   D   K LV +  + G   +      E
Sbjct: 195 PTKWSQDDLLAFASEIRRVNKPMVIAANKADAASDEQIKRLVREEEKRGYIVIPTSAAAE 254

Query: 159 M----ARSVGAVAYL 169
           +    A   G + Y+
Sbjct: 255 LTLRKAAKAGFIEYI 269


>5GM6-Y nrPDB
          Length = 876

 Score = 28.7 bits (63), Expect = 1.7,   Method: Composition-based stats.
 Identities = 8/36 (22%), Positives = 20/36 (55%), Gaps = 5/36 (13%)

Query: 15  VRSVK----VVLVGDGGCGKTSLLMVF-ADGAFPES 45
           ++ +K    ++++G+ G GKT+ L  +  +  F + 
Sbjct: 233 LQEIKKNQVLIIMGETGSGKTTQLPQYLVEDGFTDQ 268


>2OUK-A nrPDB
          Length = 263

 Score = 28.7 bits (63), Expect = 1.7,   Method: Composition-based stats.
 Identities = 7/18 (38%), Positives = 11/18 (61%)

Query: 20 VVLVGDGGCGKTSLLMVF 37
          VV++G  G GK++ L   
Sbjct: 53 VVVIGPSGSGKSTFLRCL 70


>4XGC-D nrPDB
          Length = 459

 Score = 28.7 bits (63), Expect = 1.7,   Method: Composition-based stats.
 Identities = 8/26 (30%), Positives = 13/26 (50%)

Query: 20 VVLVGDGGCGKTSLLMVFADGAFPES 45
          ++L+G  G GKT+L+        P  
Sbjct: 52 LLLLGPRGSGKTTLINSVLADLLPNK 77


>1IM2-A nrPDB
          Length = 444

 Score = 28.7 bits (63), Expect = 1.8,   Method: Composition-based stats.
 Identities = 12/52 (23%), Positives = 19/52 (36%), Gaps = 2/52 (3%)

Query: 20  VVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMVNLQVKGKPVHLHIWD 71
           ++++G  G GKT +    A      +    V       +   GK V   I D
Sbjct: 53  ILMIGPTGVGKTEIARRLAK--LANAPFIKVEATKFTEVGYVGKEVDSIIRD 102


>1E94-E nrPDB
          Length = 449

 Score = 28.7 bits (63), Expect = 1.8,   Method: Composition-based stats.
 Identities = 12/52 (23%), Positives = 19/52 (36%), Gaps = 2/52 (3%)

Query: 20  VVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMVNLQVKGKPVHLHIWD 71
           ++++G  G GKT +    A      +    V       +   GK V   I D
Sbjct: 59  ILMIGPTGVGKTEIARRLAK--LANAPFIKVEATKFTEVGYVGKEVDSIIRD 108


>1M0T-A nrPDB
          Length = 491

 Score = 28.7 bits (63), Expect = 1.8,   Method: Composition-based stats.
 Identities = 17/86 (19%), Positives = 28/86 (32%), Gaps = 12/86 (13%)

Query: 41  AFPESYTPTVFERYMVNLQVKGKPVHLHIWDTAGQDDYDRLRPLFYPDASVLLLCFDVTS 100
            F        F+     L +  K   L I DT  Q+    +  ++Y         +  T 
Sbjct: 244 KFGTKSVRLTFDDVNDKLFIDDKTGKLFIRDT-EQE----IAVVYYRTG------YTTTD 292

Query: 101 PNSFDNIFNRWYPEVNHFCKKVPIIV 126
             S  +   R + E   F  K P ++
Sbjct: 293 YTSEKDWEARLFLE-KSFAIKAPDLL 317


>1OFI-A nrPDB
          Length = 310

 Score = 28.7 bits (63), Expect = 1.9,   Method: Composition-based stats.
 Identities = 12/52 (23%), Positives = 19/52 (36%), Gaps = 2/52 (3%)

Query: 20  VVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMVNLQVKGKPVHLHIWD 71
           ++++G  G GKT +    A      +    V       +   GK V   I D
Sbjct: 53  ILMIGPTGVGKTEIARRLAK--LANAPFIKVEATKFTEVGYVGKEVDSIIRD 102


>6BZR-B nrPDB
          Length = 251

 Score = 28.7 bits (63), Expect = 1.9,   Method: Composition-based stats.
 Identities = 9/16 (56%), Positives = 11/16 (68%)

Query: 19 KVVLVGDGGCGKTSLL 34
          KV +VG  G GK+SL 
Sbjct: 42 KVGIVGRTGAGKSSLA 57


>4MRS-A nrPDB
          Length = 614

 Score = 28.7 bits (63), Expect = 2.0,   Method: Composition-based stats.
 Identities = 10/24 (41%), Positives = 14/24 (58%), Gaps = 3/24 (12%)

Query: 19  KVVLVGDGGCGKTS---LLMVFAD 39
           +V +VG  G GK++   LL  F D
Sbjct: 389 RVAIVGPSGAGKSTIARLLFRFYD 412


>5LKM-A nrPDB
          Length = 452

 Score = 28.7 bits (63), Expect = 2.0,   Method: Composition-based stats.
 Identities = 23/151 (15%), Positives = 48/151 (31%), Gaps = 31/151 (20%)

Query: 20  VVLVG-DGGCGKTSLLMVFADGAFPESYTPTVFERYMVNLQVKGKPVHLHIWDTAGQDDY 78
           +VL+G D G GK++LL+         +    V     V+ +   + + L        +  
Sbjct: 90  LVLIGGDPGIGKSTLLLQ------VSTQLSQVGTVLYVSGEESAQQIKLR------AERL 137

Query: 79  DRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVNHFCKKVPIIVVGCKTDLCKDKS 138
             +   FY         +  T+  S      R  P+         I+           + 
Sbjct: 138 GDIDSEFY--------LYAETNMQSVRAEVERIQPDFLIIDSIQTIM---------SPEI 180

Query: 139 LVNKLRRNGLEPVTYHRGQEMARSVGAVAYL 169
              +   + +  VT    Q +A++     ++
Sbjct: 181 SGVQGSVSQVREVTAELMQ-LAKTNNIAIFI 210


>5L22-B nrPDB
          Length = 572

 Score = 28.7 bits (63), Expect = 2.0,   Method: Composition-based stats.
 Identities = 7/15 (46%), Positives = 11/15 (73%)

Query: 20  VVLVGDGGCGKTSLL 34
           V ++G  G GK+SL+
Sbjct: 362 VAIIGPSGSGKSSLV 376


>1KAG-A nrPDB
          Length = 173

 Score = 28.7 bits (63), Expect = 2.0,   Method: Composition-based stats.
 Identities = 12/60 (20%), Positives = 21/60 (35%), Gaps = 6/60 (10%)

Query: 20 VVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMVNLQVKGKPVHLHIWDTAGQDDYD 79
          + LVG  G GK+++    A     E Y             V        ++D  G++ + 
Sbjct: 7  IFLVGPMGAGKSTIGRQLAQQLNMEFYDSDQEIEKRTGADVG------WVFDLEGEEGFR 60


>2WJI-A nrPDB
          Length = 165

 Score = 28.7 bits (63), Expect = 2.1,   Method: Composition-based stats.
 Identities = 19/158 (12%), Positives = 54/158 (34%), Gaps = 21/158 (13%)

Query: 15  VRSVKVVLVGDGGCGKTSLLMVFA-DGAFPESYTPTVFERYMVNLQVKGKPVHLHIWDTA 73
           ++S ++ L+G+   GK+++      +  +  ++     E+     +  G+     + D  
Sbjct: 1   MKSYEIALIGNPNVGKSTIFNALTGENVYIGNWPGVTVEKKEGEFEYNGE--KFKVVDLP 58

Query: 74  GQDDYDRLRPLFYPD--ASVLL------LCFDVTSPNSFDNIFNRWYPEVNHFCKKVPII 125
           G      L      +  A   +      L  ++    + +        ++        ++
Sbjct: 59  G---VYSLTANSIDEIIARDYIINEKPDLVVNIVDATALERNL-YLTLQLMEMGAN--LL 112

Query: 126 VVGCKTDLCKDKSLVNKLRR----NGLEPVTYHRGQEM 159
           +   K DL K   +   + +     G++ V     ++M
Sbjct: 113 LALNKMDLAKSLGIEIDVDKLEKILGVKVVPLSAAKKM 150


>1IHU-A nrPDB
          Length = 589

 Score = 28.7 bits (63), Expect = 2.1,   Method: Composition-based stats.
 Identities = 13/54 (24%), Positives = 27/54 (50%), Gaps = 5/54 (9%)

Query: 20  VVLVGDGGCGKTSL----LMVFADGAFPESYTPTVFERYMVNLQVKGKPVHLHI 69
           ++L+G GG GKT++     +  AD  F + +  T      +++ + G   +L +
Sbjct: 330 IMLMGKGGVGKTTMAAAIAVRLADMGF-DVHLTTSDPAAHLSMTLNGSLNNLQV 382


>5LF0-A nrPDB
          Length = 234

 Score = 28.7 bits (63), Expect = 2.1,   Method: Composition-based stats.
 Identities = 15/69 (21%), Positives = 23/69 (33%), Gaps = 9/69 (13%)

Query: 29  GKTSLLMVFADGAFPESYTP----TVFERYMVNLQVKGKPVHLHIWDTAGQDDYDRLRPL 84
           GKT L   + +    E        T+ E +   +      V   I + AG   + RL P 
Sbjct: 170 GKTFLEKRYNEDLELEDAIHTAILTLKESFEGQMTEDNIEV--GICNEAG---FRRLTPT 224

Query: 85  FYPDASVLL 93
              D    +
Sbjct: 225 EVKDYLAAI 233


>4G1U-C nrPDB
          Length = 266

 Score = 28.7 bits (63), Expect = 2.1,   Method: Composition-based stats.
 Identities = 9/27 (33%), Positives = 14/27 (51%), Gaps = 1/27 (3%)

Query: 20 VVLVGDGGCGKTSLLMVFADGAFPESY 46
          V ++G  G GK++LL     G    S+
Sbjct: 40 VAIIGPNGAGKSTLL-RLLTGYLSPSH 65


>4N1A-A nrPDB
          Length = 589

 Score = 28.3 bits (62), Expect = 2.2,   Method: Composition-based stats.
 Identities = 14/43 (32%), Positives = 20/43 (46%), Gaps = 5/43 (11%)

Query: 20  VVLVGDGGCGKTSLLMVFADGAFPESYTPT----VFERYMVNL 58
            ++ GD  CGK++LL         E YTP     +F  Y  +L
Sbjct: 386 FLVFGDTECGKSNLL-RLITAGIIERYTPQQARLIFIDYSRSL 427


>6MFU-A nrPDB
          Length = 225

 Score = 28.3 bits (62), Expect = 2.3,   Method: Composition-based stats.
 Identities = 13/51 (25%), Positives = 21/51 (41%), Gaps = 5/51 (9%)

Query: 20 VVLVGDGGCGKTSLLMVFAD---GAFPESYTPTVFERYMVNLQVKGKPVHL 67
          +V+ G  G GK++LL    +     F  S + T   R     +  G+  H 
Sbjct: 22 LVICGPSGTGKSTLLKTLFESQPNTFGFSVSHTT--RKPRPGEENGREYHF 70


>5NIK-J nrPDB
          Length = 654

 Score = 28.3 bits (62), Expect = 2.4,   Method: Composition-based stats.
 Identities = 7/18 (38%), Positives = 12/18 (66%)

Query: 20 VVLVGDGGCGKTSLLMVF 37
          V +VG  G GK++L+ + 
Sbjct: 37 VAIVGASGSGKSTLMNIL 54


>4DBL-C nrPDB
          Length = 249

 Score = 28.3 bits (62), Expect = 2.4,   Method: Composition-based stats.
 Identities = 8/17 (47%), Positives = 11/17 (64%)

Query: 20 VVLVGDGGCGKTSLLMV 36
          + LVG  G GK++LL  
Sbjct: 29 LHLVGPNGAGKSTLLAR 45


>2VP0-A nrPDB
          Length = 250

 Score = 28.3 bits (62), Expect = 2.4,   Method: Composition-based stats.
 Identities = 12/40 (30%), Positives = 19/40 (47%), Gaps = 3/40 (7%)

Query: 1  MTAAQA---AGEEAPPGVRSVKVVLVGDGGCGKTSLLMVF 37
          M  A +    G +   G +   V++ G+ G GKT+ L  F
Sbjct: 1  MAEAASCARKGTKYAEGTQPFTVLIEGNIGSGKTTYLNHF 40


>5LJA-A nrPDB
          Length = 231

 Score = 28.3 bits (62), Expect = 2.4,   Method: Composition-based stats.
 Identities = 7/18 (38%), Positives = 12/18 (66%)

Query: 20 VVLVGDGGCGKTSLLMVF 37
          V +VG  G GK++L+ + 
Sbjct: 37 VAIVGASGSGKSTLMNIL 54


>4TLD-A nrPDB
          Length = 253

 Score = 28.3 bits (62), Expect = 2.4,   Method: Composition-based stats.
 Identities = 15/53 (28%), Positives = 19/53 (35%)

Query: 21 VLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMVNLQVKGKPVHLHIWDTA 73
          ++ G  G GKT   + F      E   P VF  +    Q   K      WD A
Sbjct: 43 LVSGTSGTGKTLFSIQFLYNGIIEFDEPGVFVTFEETPQDIIKNARSFGWDLA 95


>2ZBL-A nrPDB
          Length = 421

 Score = 28.3 bits (62), Expect = 2.5,   Method: Composition-based stats.
 Identities = 12/56 (21%), Positives = 16/56 (28%), Gaps = 10/56 (17%)

Query: 67  LHIWDTA-GQ-DDYDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVNHFCK 120
           L  WD A  Q +DY              L+ +DVT          +W         
Sbjct: 155 LESWDEAFSQTEDYRG-GNANMHAVEAFLIVYDVTH-------DKKWLDRALRIAS 202


>2PCL-A nrPDB
          Length = 224

 Score = 28.3 bits (62), Expect = 2.5,   Method: Composition-based stats.
 Identities = 11/42 (26%), Positives = 20/42 (47%), Gaps = 5/42 (11%)

Query: 20 VVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMVNLQVK 61
          V ++G  G GK++LL  +  G       PT  + ++   +V 
Sbjct: 33 VSIIGASGSGKSTLL--YILGLLDA---PTEGKVFLEGKEVD 69


>2P65-A nrPDB
          Length = 187

 Score = 28.3 bits (62), Expect = 2.5,   Method: Composition-based stats.
 Identities = 7/14 (50%), Positives = 12/14 (85%)

Query: 21 VLVGDGGCGKTSLL 34
          +L+GD G GKT+++
Sbjct: 47 ILLGDPGVGKTAIV 60


>5A9Z-CA nrPDB
          Length = 593

 Score = 28.3 bits (62), Expect = 2.7,   Method: Composition-based stats.
 Identities = 15/84 (17%), Positives = 25/84 (29%), Gaps = 15/84 (17%)

Query: 29  GKTSLLMVFAD--GAFPESYTP--------TVFERYMVNLQVKG-----KPVHLHIWDTA 73
           GKT+L+       G F               + +   + +  K          ++I DT 
Sbjct: 17  GKTTLVDKLLQQSGTFDSRAETQERVMDSNDLEKERGITILAKNTAAIKWDYRINIVDTP 76

Query: 74  GQDDYDRLRPLFYPDASVLLLCFD 97
           G  D+             +LL  D
Sbjct: 77  GHADFGGEVERVMSMVDSVLLVVD 100


>3S1A-A nrPDB
          Length = 525

 Score = 28.3 bits (62), Expect = 2.7,   Method: Composition-based stats.
 Identities = 15/53 (28%), Positives = 19/53 (35%)

Query: 21 VLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMVNLQVKGKPVHLHIWDTA 73
          ++ G  G GKT   + F      E   P VF  +    Q   K      WD A
Sbjct: 43 LVSGTSGTGKTLFSIQFLYNGIIEFDEPGVFVTFEETPQDIIKNARSFGWDLA 95


>6FA9-A nrPDB
          Length = 655

 Score = 28.3 bits (62), Expect = 2.7,   Method: Composition-based stats.
 Identities = 7/20 (35%), Positives = 13/20 (65%)

Query: 20 VVLVGDGGCGKTSLLMVFAD 39
          ++LVG+ G GKT+ +  +  
Sbjct: 50 LILVGETGSGKTTQIPQYLH 69


>4Z8X-A nrPDB
          Length = 497

 Score = 27.9 bits (61), Expect = 2.9,   Method: Composition-based stats.
 Identities = 17/66 (25%), Positives = 27/66 (40%), Gaps = 6/66 (9%)

Query: 8   GEEAPPGVRSVKVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMVNLQVKGKPVHL 67
           G   P G     V+L G+ G GKT L    A  A     + +  +   + + V    V  
Sbjct: 47  GGRPPKG-----VLLYGEPGVGKTLLAKAIAGEAHVPFISVSGSDFVEMFVGVGAARVR- 100

Query: 68  HIWDTA 73
            +++TA
Sbjct: 101 DLFETA 106


>5GKO-A nrPDB
          Length = 671

 Score = 27.9 bits (61), Expect = 2.9,   Method: Composition-based stats.
 Identities = 7/18 (38%), Positives = 12/18 (66%)

Query: 20 VVLVGDGGCGKTSLLMVF 37
          V +VG  G GK++L+ + 
Sbjct: 46 VAIVGQSGSGKSTLMNIL 63


>5OWV-A nrPDB
          Length = 732

 Score = 27.9 bits (61), Expect = 3.0,   Method: Composition-based stats.
 Identities = 12/57 (21%), Positives = 20/57 (35%), Gaps = 4/57 (7%)

Query: 17  SVKVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMVNLQVKGK--PVHLHIWD 71
              + + G    GK+SLL       F       + E   + +   GK     ++ WD
Sbjct: 162 EFNIAITGVMNAGKSSLLNALLKEDFLG--VSNIPETANLTVLSYGKSEEAKIYFWD 216


>2XTP-A nrPDB
          Length = 260

 Score = 27.9 bits (61), Expect = 3.1,   Method: Composition-based stats.
 Identities = 9/29 (31%), Positives = 16/29 (55%), Gaps = 2/29 (6%)

Query: 4  AQAAGEEAPPGVRSVKVVLVGDGGCGKTS 32
            A G+ A      ++++LVG  G GK++
Sbjct: 11 PHAKGQCASRS--ELRIILVGKTGTGKSA 37


>2BDT-A nrPDB
          Length = 189

 Score = 27.9 bits (61), Expect = 3.1,   Method: Composition-based stats.
 Identities = 9/45 (20%), Positives = 19/45 (42%), Gaps = 4/45 (8%)

Query: 19 KVVLV-GDGGCGKTSLLMVFADGAFPESYTPTVFERYMVNLQVKG 62
          K+ ++ G  G GK++     A      +Y   +    + ++ V G
Sbjct: 3  KLYIITGPAGVGKSTTCKRLAAQLDNSAY---IEGDIINHMVVGG 44


>1ZVD-A nrPDB
          Length = 380

 Score = 27.9 bits (61), Expect = 3.1,   Method: Composition-based stats.
 Identities = 5/23 (21%), Positives = 13/23 (56%)

Query: 180 HAVFQEAAEVALSSRGRNFWRRI 202
             +F+E+    +  R ++ W+R+
Sbjct: 32  EEIFEESYRQVMKMRPKDLWKRL 54


>5B57-C nrPDB
          Length = 273

 Score = 27.9 bits (61), Expect = 3.3,   Method: Composition-based stats.
 Identities = 9/18 (50%), Positives = 12/18 (66%)

Query: 21 VLVGDGGCGKTSLLMVFA 38
           L+G  G GK++LL  FA
Sbjct: 31 ALLGRNGAGKSTLLKTFA 48


>3MKR-B nrPDB
          Length = 320

 Score = 27.9 bits (61), Expect = 3.3,   Method: Composition-based stats.
 Identities = 11/69 (15%), Positives = 30/69 (43%), Gaps = 4/69 (5%)

Query: 94  LCFDVTSPNSFDNIFNRWYPEVNHFCKKVPIIVVGCKTDLCKDKSLVNKLRRNGLEPVTY 153
           LC+ +T+   F+    ++   +      VP++VV  K ++ + + L+   R   +     
Sbjct: 108 LCYQLTTVGKFEEAVEKFRSILL----SVPLLVVDNKQEIAEAQQLITICREYIVGLSME 163

Query: 154 HRGQEMARS 162
              +++ + 
Sbjct: 164 TERKKLPKE 172


>3EPJ-A nrPDB
          Length = 409

 Score = 27.9 bits (61), Expect = 3.4,   Method: Composition-based stats.
 Identities = 10/38 (26%), Positives = 16/38 (42%), Gaps = 1/38 (2%)

Query: 19 KVVLV-GDGGCGKTSLLMVFADGAFPESYTPTVFERYM 55
          KV+++ G  G GK+ L +  A     E       + Y 
Sbjct: 3  KVIVIAGTTGVGKSQLSIQLAQKFNGEVINSDSMQVYK 40


>2IT1-A nrPDB
          Length = 362

 Score = 27.9 bits (61), Expect = 3.4,   Method: Composition-based stats.
 Identities = 12/35 (34%), Positives = 17/35 (48%), Gaps = 5/35 (14%)

Query: 20 VVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERY 54
          + L+G  G GK++LL   A       Y PT  + Y
Sbjct: 32 MALLGPSGSGKSTLLYTIAG-----IYKPTSGKIY 61


>1IY1-A nrPDB
          Length = 254

 Score = 27.9 bits (61), Expect = 3.4,   Method: Composition-based stats.
 Identities = 16/54 (29%), Positives = 24/54 (44%), Gaps = 1/54 (1%)

Query: 20  VVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMVNLQVKGKPVHLHIWDTA 73
           V+LVG  G GKT L    A  A     T +  +   + + V    V   +++TA
Sbjct: 52  VLLVGPPGVGKTHLARAVAGEARVPFITASGSDFVEMFVGVGAARVR-DLFETA 104


>5ZME-A nrPDB
          Length = 687

 Score = 27.9 bits (61), Expect = 3.5,   Method: Composition-based stats.
 Identities = 20/78 (25%), Positives = 28/78 (35%), Gaps = 10/78 (12%)

Query: 9  EEAPPGVRSVKVVLVGDGGCGKTSLLMVFADGAFPESYTPTVF--------ERYMVNLQV 60
          EE   G +   +++ G GG GKTSL    A       +T  V            +     
Sbjct: 4  EELAAGQQRKYIMISGKGGVGKTSLSASLAVKLAAAGHTTLVVSTDPAHSLSDSLAQDVS 63

Query: 61 KGKPVHLHIWD--TAGQD 76
           G+PV L   D    G +
Sbjct: 64 GGRPVLLQGTDLPLWGLE 81


>5TV4-A nrPDB
          Length = 605

 Score = 27.9 bits (61), Expect = 3.6,   Method: Composition-based stats.
 Identities = 11/23 (47%), Positives = 13/23 (56%), Gaps = 3/23 (13%)

Query: 20  VVLVGDGGCGKT---SLLMVFAD 39
           V LVG  G GK+   SL+  F D
Sbjct: 395 VALVGRSGSGKSTIASLITRFYD 417


>2DHR-A nrPDB
          Length = 499

 Score = 27.9 bits (61), Expect = 3.6,   Method: Composition-based stats.
 Identities = 16/54 (29%), Positives = 24/54 (44%), Gaps = 1/54 (1%)

Query: 20  VVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMVNLQVKGKPVHLHIWDTA 73
           V+LVG  G GKT L    A  A     T +  +   + + V    V   +++TA
Sbjct: 67  VLLVGPPGVGKTHLARAVAGEARVPFITASGSDFVEMFVGVGAARVR-DLFETA 119


>1Z6G-A nrPDB
          Length = 218

 Score = 27.9 bits (61), Expect = 3.6,   Method: Composition-based stats.
 Identities = 8/27 (29%), Positives = 13/27 (48%), Gaps = 1/27 (3%)

Query: 20 VVLVGDGGCGKTSLLMVFADGAFPESY 46
          +V+ G  G GK +L+       FP  +
Sbjct: 26 LVICGPSGVGKGTLIKKLL-NEFPNYF 51


>1EZ4-A nrPDB
          Length = 318

 Score = 27.9 bits (61), Expect = 3.6,   Method: Composition-based stats.
 Identities = 12/29 (41%), Positives = 14/29 (48%), Gaps = 1/29 (3%)

Query: 19 KVVLVGDGGCGKTSLLMVFADGAFPESYT 47
          KVVLVGDG  G +S     A     E + 
Sbjct: 7  KVVLVGDGAVG-SSYAFAMAQQGIAEEFV 34


>5JSZ-B nrPDB
          Length = 287

 Score = 27.5 bits (60), Expect = 3.7,   Method: Composition-based stats.
 Identities = 8/18 (44%), Positives = 12/18 (66%)

Query: 20 VVLVGDGGCGKTSLLMVF 37
          + LVG  G GK++L+  F
Sbjct: 36 IALVGHTGSGKSTLMQHF 53


>6QUZ-A nrPDB
          Length = 587

 Score = 27.5 bits (60), Expect = 3.7,   Method: Composition-based stats.
 Identities = 6/16 (37%), Positives = 12/16 (75%)

Query: 20  VVLVGDGGCGKTSLLM 35
           V ++G+ G GK++L+ 
Sbjct: 372 VAVLGETGSGKSTLMN 387


>5DO7-A nrPDB
          Length = 666

 Score = 27.5 bits (60), Expect = 4.0,   Method: Composition-based stats.
 Identities = 7/15 (46%), Positives = 11/15 (73%)

Query: 20 VVLVGDGGCGKTSLL 34
          + ++G  G GKT+LL
Sbjct: 82 MCILGSSGSGKTTLL 96


>5NP9-A nrPDB
          Length = 158

 Score = 27.5 bits (60), Expect = 4.0,   Method: Composition-based stats.
 Identities = 10/21 (47%), Positives = 13/21 (61%)

Query: 20 VVLVGDGGCGKTSLLMVFADG 40
          + L GD G GKT+    FA+G
Sbjct: 31 LTLEGDLGAGKTTFTKGFAEG 51


>4XIG-S nrPDB
          Length = 363

 Score = 27.5 bits (60), Expect = 4.0,   Method: Composition-based stats.
 Identities = 12/47 (25%), Positives = 22/47 (46%), Gaps = 10/47 (21%)

Query: 20 VVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMVNLQVKGKPVH 66
          VVLVG  GCGK++  +    G         + E     +++ G+ ++
Sbjct: 33 VVLVGPSGCGKST-TLRMVAG---------LEEISGGTIRIDGRVIN 69


>3NHB-A nrPDB
          Length = 306

 Score = 27.5 bits (60), Expect = 4.1,   Method: Composition-based stats.
 Identities = 10/23 (43%), Positives = 13/23 (56%), Gaps = 3/23 (13%)

Query: 20  VVLVGDGGCGKTS---LLMVFAD 39
           + LVG  G GK++   LL  F D
Sbjct: 83  LALVGPSGAGKSTILRLLFRFYD 105


>5CDF-E nrPDB
          Length = 474

 Score = 27.5 bits (60), Expect = 4.2,   Method: Composition-based stats.
 Identities = 10/29 (34%), Positives = 14/29 (48%)

Query: 12  PPGVRSVKVVLVGDGGCGKTSLLMVFADG 40
            P  +  K+ L G  G GKT L+M   + 
Sbjct: 139 APYSKGGKIGLFGGAGVGKTVLIMELINN 167


>6C2V-A nrPDB
          Length = 115

 Score = 27.5 bits (60), Expect = 4.3,   Method: Composition-based stats.
 Identities = 14/33 (42%), Positives = 18/33 (54%), Gaps = 2/33 (6%)

Query: 20 VVLVGDGGCGKTSL--LMVFADGAFPESYTPTV 50
          VV+VG  G GKT+L  L   A    P++   TV
Sbjct: 5  VVIVGPSGAGKTTLDELARKAKEEVPDAEIRTV 37



 Score = 27.5 bits (60), Expect = 4.3,   Method: Composition-based stats.
 Identities = 8/16 (50%), Positives = 11/16 (68%)

Query: 20 VVLVGDGGCGKTSLLM 35
          VV+VG  G GK++L  
Sbjct: 58 VVIVGPSGSGKSTLAK 73


>3WMF-A nrPDB
          Length = 621

 Score = 27.5 bits (60), Expect = 4.4,   Method: Composition-based stats.
 Identities = 11/23 (47%), Positives = 14/23 (60%), Gaps = 3/23 (13%)

Query: 20  VVLVGDGGCGKTS---LLMVFAD 39
           V +VG  G GK++   LLM F D
Sbjct: 382 VAIVGGSGAGKSTIIQLLMRFYD 404


>4Q7K-A nrPDB
          Length = 250

 Score = 27.5 bits (60), Expect = 4.4,   Method: Composition-based stats.
 Identities = 6/16 (37%), Positives = 12/16 (75%)

Query: 20 VVLVGDGGCGKTSLLM 35
          V ++G+ G GK++L+ 
Sbjct: 34 VAVLGETGSGKSTLMN 49


>6FOC-D nrPDB
          Length = 475

 Score = 27.5 bits (60), Expect = 4.6,   Method: Composition-based stats.
 Identities = 11/23 (47%), Positives = 13/23 (56%)

Query: 13  PGVRSVKVVLVGDGGCGKTSLLM 35
           P VR  K+ L G  G GKT L+ 
Sbjct: 149 PYVRGGKIALFGGAGVGKTVLIQ 171


>3WBG-A nrPDB
          Length = 153

 Score = 27.5 bits (60), Expect = 4.6,   Method: Composition-based stats.
 Identities = 12/35 (34%), Positives = 15/35 (42%), Gaps = 5/35 (14%)

Query: 45  SYTPTVFERYMVNLQV---KGKPVHLHIWDTAGQD 76
            +  T  +   V   V    GK VHL  WD  GQ+
Sbjct: 90  EFDETTADDRKVKSIVTLDGGKLVHLQKWD--GQE 122


>1S0U-A nrPDB
          Length = 408

 Score = 27.2 bits (59), Expect = 4.8,   Method: Composition-based stats.
 Identities = 16/76 (21%), Positives = 28/76 (36%), Gaps = 13/76 (17%)

Query: 124 IIVVGCKTDLCKDKSLVNKLRRNGLEPVTYHRGQEMARSVGA--VAYLECSARLHDNVHA 181
           II+V  K DL  +K               Y + +E  +   A     +  SA    N+  
Sbjct: 138 IIIVQNKIDLVDEKQAEE----------NYEQIKEFVKGTIAENAPIIPISAHHEANID- 186

Query: 182 VFQEAAEVALSSRGRN 197
           V  +A +  + +  R+
Sbjct: 187 VLLKAIQDFIPTPKRD 202


>6FKI-F nrPDB
          Length = 498

 Score = 27.2 bits (59), Expect = 4.8,   Method: Composition-based stats.
 Identities = 9/22 (40%), Positives = 12/22 (54%)

Query: 19  KVVLVGDGGCGKTSLLMVFADG 40
           K+ L G  G GKT L+M   + 
Sbjct: 167 KIGLFGGAGVGKTVLIMELINN 188


>2W6I-D nrPDB
          Length = 528

 Score = 27.2 bits (59), Expect = 4.8,   Method: Composition-based stats.
 Identities = 9/22 (40%), Positives = 12/22 (54%)

Query: 19  KVVLVGDGGCGKTSLLMVFADG 40
           K+ L G  G GKT L+M   + 
Sbjct: 201 KIGLFGGAGVGKTVLIMELINN 222


>1LVG-A nrPDB
          Length = 198

 Score = 27.2 bits (59), Expect = 4.9,   Method: Composition-based stats.
 Identities = 9/18 (50%), Positives = 11/18 (61%)

Query: 20 VVLVGDGGCGKTSLLMVF 37
          VVL G  G GK++LL   
Sbjct: 7  VVLSGPSGAGKSTLLKKL 24


>1JAL-A nrPDB
          Length = 363

 Score = 27.2 bits (59), Expect = 4.9,   Method: Composition-based stats.
 Identities = 13/74 (17%), Positives = 20/74 (27%), Gaps = 16/74 (21%)

Query: 18 VKVVLVGDGGCGKTSLLMVFADGAFPESYTP--TVFERYMVNLQVKGK------------ 63
           K  +VG    GK++L           +  P  T+     V      +            
Sbjct: 3  FKCGIVGLPNVGKSTLFNALTKAGIEAANYPFCTIEPNTGVVPMPDPRLDALAEIVKPER 62

Query: 64 --PVHLHIWDTAGQ 75
            P  +   D AG 
Sbjct: 63 ILPTTMEFVDIAGL 76


>6CEP-A nrPDB
          Length = 334

 Score = 27.2 bits (59), Expect = 5.0,   Method: Composition-based stats.
 Identities = 8/28 (28%), Positives = 13/28 (46%)

Query: 106 NIFNRWYPEVNHFCKKVPIIVVGCKTDL 133
           N+F    P++  +     IIVV    D+
Sbjct: 116 NVFKFIIPQIVKYSPDCIIIVVSNPVDI 143


>1WDT-A nrPDB
          Length = 665

 Score = 27.2 bits (59), Expect = 5.0,   Method: Composition-based stats.
 Identities = 12/34 (35%), Positives = 15/34 (44%), Gaps = 2/34 (5%)

Query: 8  GEEAPPGVRSVKVVLVGDGGCGKTSLLMVFADGA 41
          G E    +R+  V LVG  G GKT+L        
Sbjct: 2  GTEGGAMIRT--VALVGHAGSGKTTLTEALLYKT 33


>5EUM-A nrPDB
          Length = 258

 Score = 27.2 bits (59), Expect = 5.0,   Method: Composition-based stats.
 Identities = 10/23 (43%), Positives = 13/23 (56%), Gaps = 3/23 (13%)

Query: 20 VVLVGDGGCGKTS---LLMVFAD 39
          V LVG  G GK++   L+  F D
Sbjct: 48 VALVGRSGSGKSTIANLVTRFYD 70


>2XND-D nrPDB
          Length = 467

 Score = 27.2 bits (59), Expect = 5.4,   Method: Composition-based stats.
 Identities = 9/22 (40%), Positives = 12/22 (54%)

Query: 19  KVVLVGDGGCGKTSLLMVFADG 40
           K+ L G  G GKT L+M   + 
Sbjct: 143 KIGLFGGAGVGKTVLIMELINN 164


>4XD7-D nrPDB
          Length = 483

 Score = 27.2 bits (59), Expect = 5.4,   Method: Composition-based stats.
 Identities = 8/22 (36%), Positives = 10/22 (45%)

Query: 19  KVVLVGDGGCGKTSLLMVFADG 40
           K+ L G  G GKT L+      
Sbjct: 163 KIGLFGGAGVGKTVLIQELIHN 184


>3M6A-A nrPDB
          Length = 543

 Score = 27.2 bits (59), Expect = 5.5,   Method: Composition-based stats.
 Identities = 11/27 (40%), Positives = 14/27 (51%), Gaps = 3/27 (11%)

Query: 16  RSVK---VVLVGDGGCGKTSLLMVFAD 39
           +S+K   + L G  G GKTSL    A 
Sbjct: 104 KSLKGPILCLAGPPGVGKTSLAKSIAK 130


>6AQ1-A nrPDB
          Length = 136

 Score = 27.2 bits (59), Expect = 5.6,   Method: Composition-based stats.
 Identities = 12/35 (34%), Positives = 15/35 (42%), Gaps = 5/35 (14%)

Query: 45  SYTPTVFERYMVNLQV---KGKPVHLHIWDTAGQD 76
            +  T  +   V   V    GK VHL  WD  GQ+
Sbjct: 73  EFDETTADDRKVKSIVTLDGGKLVHLQKWD--GQE 105


>2FGK-A nrPDB
          Length = 247

 Score = 26.8 bits (58), Expect = 6.3,   Method: Composition-based stats.
 Identities = 8/26 (30%), Positives = 14/26 (53%)

Query: 20 VVLVGDGGCGKTSLLMVFADGAFPES 45
          + +VG  G GK++L  +      PE+
Sbjct: 38 IGIVGRSGSGKSTLTKLIQRFYIPEN 63


>4O0M-A nrPDB
          Length = 524

 Score = 26.8 bits (58), Expect = 6.6,   Method: Composition-based stats.
 Identities = 8/34 (23%), Positives = 13/34 (38%)

Query: 21 VLVGDGGCGKTSLLMVFADGAFPESYTPTVFERY 54
          ++ G  G GKT   + F          P +F  +
Sbjct: 44 LVSGTSGTGKTLFAVQFLYNGITIFNEPGIFVTF 77


>4F4J-A nrPDB
          Length = 202

 Score = 26.8 bits (58), Expect = 6.8,   Method: Composition-based stats.
 Identities = 9/25 (36%), Positives = 13/25 (52%)

Query: 13 PGVRSVKVVLVGDGGCGKTSLLMVF 37
           G  S  +V+ G  G GK++LL   
Sbjct: 13 QGSMSRPIVISGPSGTGKSTLLKKL 37


>3N5F-A nrPDB
          Length = 408

 Score = 26.8 bits (58), Expect = 7.3,   Method: Composition-based stats.
 Identities = 7/61 (11%), Positives = 18/61 (29%), Gaps = 10/61 (16%)

Query: 72  TAGQDDYDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVNHFCKKVPIIVVGCKT 131
           TA +     L   +  +A + +          +++                 +++VG   
Sbjct: 31  TAEERRAKDLVASYMREAGLFV----------YEDAAGNLIGRKEGTNPDATVVLVGSHL 80

Query: 132 D 132
           D
Sbjct: 81  D 81


>5JWO-A nrPDB
          Length = 247

 Score = 26.8 bits (58), Expect = 7.4,   Method: Composition-based stats.
 Identities = 8/34 (23%), Positives = 13/34 (38%)

Query: 21 VLVGDGGCGKTSLLMVFADGAFPESYTPTVFERY 54
          ++ G  G GKT   + F          P +F  +
Sbjct: 36 LVSGTSGTGKTLFAVQFLYNGITIFNEPGIFVTF 69


>5TY0-A nrPDB
          Length = 422

 Score = 26.8 bits (58), Expect = 8.1,   Method: Composition-based stats.
 Identities = 12/70 (17%), Positives = 23/70 (32%), Gaps = 10/70 (14%)

Query: 66  HLHIWDTAGQDDYDRLRPLFYPDASVLLLCFDV---TSPNSFDNIFNRWYPEVNHFCKKV 122
            ++I DT G  D+              ++ FD      P S + +   W     +   ++
Sbjct: 84  RINIIDTPGHVDFMIEVERSLRVLDGAVVVFDSVAGVEPQS-ETV---WRQANKYGVPRI 139

Query: 123 PIIVVGCKTD 132
             +    K D
Sbjct: 140 VFV---NKMD 146


>3PEN-A nrPDB
          Length = 403

 Score = 26.4 bits (57), Expect = 8.9,   Method: Composition-based stats.
 Identities = 12/78 (15%), Positives = 31/78 (39%), Gaps = 9/78 (11%)

Query: 124 IIVVGCKTDLCKDKSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNVHAVF 183
           +I+V  K D+   +  +++ R+              A +V  +     SA    N+ ++ 
Sbjct: 132 LIIVQNKVDVVSKEEALSQYRQIKQFTKGT-----WAENVPIIP---VSALHKINIDSLI 183

Query: 184 QEAAEVALSSRGRNFWRR 201
           +   E  + +  R+  ++
Sbjct: 184 EGI-EEYIKTPYRDLSQK 200


>5ANB-A nrPDB
          Length = 398

 Score = 26.4 bits (57), Expect = 9.0,   Method: Composition-based stats.
 Identities = 7/49 (14%), Positives = 18/49 (36%), Gaps = 1/49 (2%)

Query: 133 LCKDKSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNVHA 181
           L    +   K      + +T   G+  A     + +++ S++    +H 
Sbjct: 332 LKGCVAGPRKRALTLRKSITTQTGRA-ALEKITLKFIDTSSKFGHGLHQ 379


>2KHQ-A nrPDB
          Length = 110

 Score = 26.4 bits (57), Expect = 9.1,   Method: Composition-based stats.
 Identities = 9/54 (16%), Positives = 18/54 (33%)

Query: 134 CKDKSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNVHAVFQEAA 187
              K + +  R   L+ +     Q+     G     E   +L+  +   F +A 
Sbjct: 30  SAYKHIKDHFRHKLLKDIKRTEYQKFLNEYGLTHSYETIRKLNSYIRNAFDDAI 83


>1OXV-A nrPDB
          Length = 353

 Score = 26.4 bits (57), Expect = 9.2,   Method: Composition-based stats.
 Identities = 9/35 (25%), Positives = 15/35 (42%), Gaps = 1/35 (2%)

Query: 22 LVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMV 56
          ++G  G GKT+ +     G    S     F+  +V
Sbjct: 36 ILGPSGAGKTTFM-RIIAGLDVPSTGELYFDDRLV 69


>2XTZ-A nrPDB
          Length = 354

 Score = 26.4 bits (57), Expect = 9.8,   Method: Composition-based stats.
 Identities = 7/24 (29%), Positives = 14/24 (58%)

Query: 13 PGVRSVKVVLVGDGGCGKTSLLMV 36
           G+   K++L+G G  GK+++   
Sbjct: 5  SGIHIRKLLLLGAGESGKSTIFKQ 28


  Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta
    Posted date:  Jan 3, 2023  9:05 PM
  Number of letters in database: 10,336,785
  Number of sequences in database:  36,641
  
Lambda     K      H
   0.312    0.152    0.453 

Lambda     K      H
   0.267   0.0468    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,178,964
Number of Sequences: 36641
Number of extensions: 392945
Number of successful extensions: 2857
Number of sequences better than 10.0: 446
Number of HSP's better than 10.0 without gapping: 470
Number of HSP's successfully gapped in prelim test: 161
Number of HSP's that attempted gapping in prelim test: 1748
Number of HSP's gapped (non-prelim): 697
length of query: 210
length of database: 10,336,785
effective HSP length: 93
effective length of query: 117
effective length of database: 6,929,172
effective search space: 810713124
effective search space used: 810713124
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.1 bits)
S2: 57 (26.4 bits)