BLASTP 2.2.23 [Feb-03-2010] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= O00194 (218 letters) Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta 36,641 sequences; 10,336,785 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value 2IEZ-A nrPDB 432 e-122 2F7S-A nrPDB 414 e-116 2IEY-A nrPDB 386 e-108 3BC1-A nrPDB 318 1e-87 6HUF-A nrPDB 276 5e-75 4RKF-A nrPDB 179 1e-45 1ZBD-A nrPDB 179 1e-45 2GF9-A nrPDB 176 6e-45 3RAB-A nrPDB 176 9e-45 3DZ8-A nrPDB 171 2e-43 4LHX-A nrPDB 170 5e-43 5SZI-A nrPDB 170 5e-43 5SZH-B nrPDB 166 5e-42 6O62-A nrPDB 163 6e-41 5SZJ-A nrPDB 162 7e-41 3CPH-A nrPDB 162 1e-40 5LPN-A nrPDB 161 2e-40 3L0I-B nrPDB 160 4e-40 2RHD-A nrPDB 159 9e-40 2OCY-C nrPDB 158 2e-39 2WWX-A nrPDB 157 5e-39 6IF2-B nrPDB 156 6e-39 2G6B-A nrPDB 147 5e-36 3CUE-F nrPDB 146 8e-36 5FBL-B nrPDB 145 1e-35 3BFK-A nrPDB 143 5e-35 3CPJ-B nrPDB 142 8e-35 4UJ4-A nrPDB 142 1e-34 1YZN-A nrPDB 142 1e-34 2F9L-A nrPDB 140 5e-34 3TSO-A nrPDB 139 8e-34 2EW1-A nrPDB 137 4e-33 1X3S-A nrPDB 135 1e-32 5XR6-A nrPDB 135 1e-32 1Z0F-A nrPDB 132 8e-32 3RWM-B nrPDB 132 1e-31 1Z0A-A nrPDB 132 1e-31 2P5S-A nrPDB 130 5e-31 2A5J-A nrPDB 130 6e-31 4RKE-A nrPDB 129 1e-30 2BMD-A nrPDB 127 3e-30 2HUP-A nrPDB 127 3e-30 2IL1-A nrPDB 125 1e-29 5UB8-A nrPDB 125 2e-29 4PHF-A nrPDB 124 2e-29 2O52-A nrPDB 124 4e-29 1YZU-A nrPDB 123 6e-29 1D5C-A nrPDB 119 1e-27 1EK0-A nrPDB 116 7e-27 5LDD-C nrPDB 116 9e-27 4QXA-A nrPDB 115 2e-26 1WMS-A nrPDB 114 4e-26 4FMC-F nrPDB 113 6e-26 6IYB-A nrPDB 113 8e-26 1YVD-A nrPDB 112 8e-26 2OCB-A nrPDB 110 3e-25 1Z06-A nrPDB 110 5e-25 2G77-B nrPDB 110 6e-25 2FG5-A nrPDB 108 2e-24 2FFQ-A nrPDB 108 3e-24 1TU4-A nrPDB 107 6e-24 2GIL-A nrPDB 105 1e-23 5YOZ-A nrPDB 105 1e-23 4G01-B nrPDB 105 1e-23 2HEI-A nrPDB 105 2e-23 4CZ2-A nrPDB 103 6e-23 5LEF-A nrPDB 103 7e-23 4KYI-B nrPDB 101 3e-22 6FF8-A nrPDB 100 5e-22 2N1B-A nrPDB 98 2e-21 5UWI-A nrPDB 98 2e-21 5CLL-A nrPDB 98 2e-21 1Z22-A nrPDB 94 3e-20 2J0V-A nrPDB 92 2e-19 5XOJ-A nrPDB 92 2e-19 3WYF-A nrPDB 91 3e-19 2WBL-C nrPDB 91 4e-19 2NTY-C nrPDB 91 5e-19 3BWD-D nrPDB 91 5e-19 5CM8-B nrPDB 89 1e-18 1ZC4-A nrPDB 89 2e-18 2KE5-A nrPDB 89 2e-18 4WA7-A nrPDB 88 2e-18 5UHV-A nrPDB 88 3e-18 5XC3-A nrPDB 88 3e-18 3CON-A nrPDB 88 3e-18 4DJT-A nrPDB 85 2e-17 5WDQ-A nrPDB 84 3e-17 4U5X-A nrPDB 84 5e-17 2J1L-A nrPDB 84 6e-17 4KU4-A nrPDB 84 6e-17 3TH5-A nrPDB 81 3e-16 2FN4-A nrPDB 80 1e-15 4M8N-E nrPDB 79 1e-15 4KLZ-A nrPDB 79 1e-15 3RYT-C nrPDB 79 2e-15 4DXA-A nrPDB 79 2e-15 2ERY-A nrPDB 79 2e-15 3OES-A nrPDB 78 2e-15 2WKQ-A nrPDB 78 3e-15 3E5H-A nrPDB 77 6e-15 2W2X-A nrPDB 77 7e-15 5WDR-A nrPDB 76 1e-14 1RYH-A nrPDB 76 1e-14 5VCU-A nrPDB 75 2e-14 2ERX-A nrPDB 75 2e-14 3CLV-A nrPDB 75 3e-14 2Q3H-A nrPDB 74 4e-14 3PIR-A nrPDB 73 1e-13 5ZHX-e nrPDB 71 3e-13 3RAP-R nrPDB 71 4e-13 5C2K-A nrPDB 70 6e-13 2ATV-A nrPDB 70 1e-12 4MIT-A nrPDB 69 1e-12 5JCP-B nrPDB 67 5e-12 3VHL-B nrPDB 67 8e-12 3A58-B nrPDB 67 9e-12 3T5G-A nrPDB 66 9e-12 5ZVP-A nrPDB 65 2e-11 2FV8-A nrPDB 65 2e-11 2ATX-A nrPDB 65 2e-11 3CBQ-A nrPDB 65 3e-11 3REG-A nrPDB 64 5e-11 2GF0-A nrPDB 64 7e-11 4ILE-A nrPDB 61 4e-10 5HZH-A nrPDB 60 6e-10 3Q85-A nrPDB 60 1e-09 2YC4-C nrPDB 59 2e-09 5NZV-F nrPDB 58 2e-09 2AL7-A nrPDB 58 3e-09 2G3Y-A nrPDB 58 3e-09 1GWN-A nrPDB 57 4e-09 2CJW-A nrPDB 57 5e-09 1M7B-A nrPDB 57 6e-09 5C1S-A nrPDB 55 2e-08 3D6T-B nrPDB 54 4e-08 5UF8-A nrPDB 52 1e-07 2NZJ-A nrPDB 52 2e-07 3LVQ-E nrPDB 52 2e-07 3Q72-A nrPDB 52 2e-07 1KSG-A nrPDB 52 2e-07 3O47-A nrPDB 52 2e-07 6FAE-B nrPDB 52 3e-07 3AQ4-A nrPDB 52 3e-07 2A5F-A nrPDB 51 4e-07 1Z6X-A nrPDB 50 1e-06 1J2J-A nrPDB 49 2e-06 6DFF-C nrPDB 49 2e-06 6BBQ-A nrPDB 49 2e-06 2REX-B nrPDB 48 3e-06 2B6H-A nrPDB 47 6e-06 1MOZ-A nrPDB 45 3e-05 4YLG-A nrPDB 44 5e-05 3LRP-A nrPDB 43 9e-05 3DPU-A nrPDB 43 9e-05 5EE5-B nrPDB 43 1e-04 3C5C-A nrPDB 42 2e-04 6HLU-A nrPDB 42 3e-04 1F6B-A nrPDB 41 3e-04 4V0N-A nrPDB 41 5e-04 2H16-A nrPDB 39 0.002 1YZG-A nrPDB 39 0.002 3IHW-A nrPDB 36 0.013 4WNR-A nrPDB 35 0.025 2H57-A nrPDB 35 0.026 2X77-A nrPDB 34 0.056 5BS3-B nrPDB 33 0.074 6GNI-B nrPDB 33 0.095 4M9Q-A nrPDB 32 0.15 5DI3-B nrPDB 32 0.15 6IAE-A nrPDB 32 0.17 1U0L-A nrPDB 32 0.18 1M2O-B nrPDB 32 0.19 4ZI3-A nrPDB 32 0.28 6CES-A nrPDB 31 0.46 6D4G-A nrPDB 30 0.61 3C5H-A nrPDB 30 0.68 5XXB-U nrPDB 30 0.96 6HZK-A nrPDB 29 1.3 5IRR-A nrPDB 29 1.3 6G79-A nrPDB 29 1.4 5DE3-A nrPDB 29 1.7 3MCI-A nrPDB 29 1.7 4RIT-B nrPDB 29 1.9 6GDG-D nrPDB 28 2.0 4KV9-A nrPDB 28 2.3 5IWM-B nrPDB 28 2.9 4C0K-A nrPDB 28 2.9 3BH6-A nrPDB 28 3.7 1LNZ-A nrPDB 28 3.9 1CI0-A nrPDB 28 4.0 5HCI-A nrPDB 27 6.3 2IWR-A nrPDB 27 6.6 6MFM-A nrPDB 27 7.4 2AF3-C nrPDB 27 8.6 >2IEZ-A nrPDB Length = 220 Score = 432 bits (1112), Expect = e-122, Method: Compositional matrix adjust. Identities = 205/218 (94%), Positives = 212/218 (97%) Query: 1 MTDGDYDYLIKLLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYNAQGPNG 60 MTDGDYDYLIKLLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVY+ QG +G Sbjct: 3 MTDGDYDYLIKLLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYDTQGADG 62 Query: 61 SSGKAFKVHLQLWDTAGQERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVRNWMSQLQAN 120 +SGKAFKVHLQLWDTAG ERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVRNWMSQLQAN Sbjct: 63 ASGKAFKVHLQLWDTAGLERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVRNWMSQLQAN 122 Query: 121 AYCENPDIVLIGNKADLPDQREVNERQARELADKYGIPYFETSAATGQNVEKAVETLLDL 180 AYCENPDIVLIGNKADLPDQREVNERQARELA+KYGIPYFETSAATGQNVEK+VETLLDL Sbjct: 123 AYCENPDIVLIGNKADLPDQREVNERQARELAEKYGIPYFETSAATGQNVEKSVETLLDL 182 Query: 181 IMKRMEQCVEKTQIPDTVNGGNSGNLDGEKPPEKKCIC 218 IMKRME+CVEKTQ+PDTVNGGNSG LDGEKP EKKC C Sbjct: 183 IMKRMEKCVEKTQVPDTVNGGNSGKLDGEKPAEKKCAC 220 >2F7S-A nrPDB Length = 217 Score = 414 bits (1065), Expect = e-116, Method: Compositional matrix adjust. Identities = 198/198 (100%), Positives = 198/198 (100%) Query: 4 GDYDYLIKLLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYNAQGPNGSSG 63 GDYDYLIKLLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYNAQGPNGSSG Sbjct: 20 GDYDYLIKLLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYNAQGPNGSSG 79 Query: 64 KAFKVHLQLWDTAGQERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVRNWMSQLQANAYC 123 KAFKVHLQLWDTAGQERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVRNWMSQLQANAYC Sbjct: 80 KAFKVHLQLWDTAGQERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVRNWMSQLQANAYC 139 Query: 124 ENPDIVLIGNKADLPDQREVNERQARELADKYGIPYFETSAATGQNVEKAVETLLDLIMK 183 ENPDIVLIGNKADLPDQREVNERQARELADKYGIPYFETSAATGQNVEKAVETLLDLIMK Sbjct: 140 ENPDIVLIGNKADLPDQREVNERQARELADKYGIPYFETSAATGQNVEKAVETLLDLIMK 199 Query: 184 RMEQCVEKTQIPDTVNGG 201 RMEQCVEKTQIPDTVNGG Sbjct: 200 RMEQCVEKTQIPDTVNGG 217 >2IEY-A nrPDB Length = 195 Score = 386 bits (992), Expect = e-108, Method: Compositional matrix adjust. Identities = 184/193 (95%), Positives = 190/193 (98%) Query: 1 MTDGDYDYLIKLLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYNAQGPNG 60 MTDGDYDYLIKLLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVY+ QG +G Sbjct: 3 MTDGDYDYLIKLLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYDTQGADG 62 Query: 61 SSGKAFKVHLQLWDTAGQERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVRNWMSQLQAN 120 +SGKAFKVHLQLWDTAG ERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVRNWMSQLQAN Sbjct: 63 ASGKAFKVHLQLWDTAGLERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVRNWMSQLQAN 122 Query: 121 AYCENPDIVLIGNKADLPDQREVNERQARELADKYGIPYFETSAATGQNVEKAVETLLDL 180 AYCENPDIVLIGNKADLPDQREVNERQARELA+KYGIPYFETSAATGQNVEK+VETLLDL Sbjct: 123 AYCENPDIVLIGNKADLPDQREVNERQARELAEKYGIPYFETSAATGQNVEKSVETLLDL 182 Query: 181 IMKRMEQCVEKTQ 193 IMKRME+CVEKTQ Sbjct: 183 IMKRMEKCVEKTQ 195 >3BC1-A nrPDB Length = 195 Score = 318 bits (814), Expect = 1e-87, Method: Compositional matrix adjust. Identities = 148/192 (77%), Positives = 169/192 (88%) Query: 1 MTDGDYDYLIKLLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYNAQGPNG 60 M+DGDYDYLIK LALGDSGVGKT+ LY+YTD KFN KFITTVGIDFREKRVVY A GP+G Sbjct: 3 MSDGDYDYLIKFLALGDSGVGKTSVLYQYTDGKFNSKFITTVGIDFREKRVVYRANGPDG 62 Query: 61 SSGKAFKVHLQLWDTAGQERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVRNWMSQLQAN 120 + G+ ++HLQLWDTAG ERFRSLTTAFFRDAMGFLL+FDLT++QSFLNVRNW+SQLQ + Sbjct: 63 AVGRGQRIHLQLWDTAGLERFRSLTTAFFRDAMGFLLLFDLTNEQSFLNVRNWISQLQMH 122 Query: 121 AYCENPDIVLIGNKADLPDQREVNERQARELADKYGIPYFETSAATGQNVEKAVETLLDL 180 AY ENPDIVL GNK+DL DQR V E +ARELA+KYGIPYFETSAA G N+ A+E LLDL Sbjct: 123 AYSENPDIVLCGNKSDLEDQRAVKEEEARELAEKYGIPYFETSAANGTNISHAIEMLLDL 182 Query: 181 IMKRMEQCVEKT 192 IMKRME+ V+K+ Sbjct: 183 IMKRMERSVDKS 194 >6HUF-A nrPDB Length = 182 Score = 276 bits (706), Expect = 5e-75, Method: Compositional matrix adjust. Identities = 132/191 (69%), Positives = 157/191 (82%), Gaps = 10/191 (5%) Query: 2 TDGDYDYLIKLLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYNAQGPNGS 61 +DGDYDYLIK LALGDSGVGKT+ LY+YTD KFN KFITTVGIDFREK + N + Sbjct: 2 SDGDYDYLIKFLALGDSGVGKTSVLYQYTDGKFNSKFITTVGIDFREKTIYRNDK----- 56 Query: 62 SGKAFKVHLQLWDTAGQERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVRNWMSQLQANA 121 ++ LQLWDTAG ERFRSLTTAFFRDAMGFLL+FDLT+++SFLNVRNW+SQL+ +A Sbjct: 57 -----RIKLQLWDTAGLERFRSLTTAFFRDAMGFLLLFDLTNEESFLNVRNWISQLKTHA 111 Query: 122 YCENPDIVLIGNKADLPDQREVNERQARELADKYGIPYFETSAATGQNVEKAVETLLDLI 181 Y ENPDIVL GNK+DL D+R V +AR+LA+ YGIPYFETSAA G N+ +A+E LLDLI Sbjct: 112 YSENPDIVLCGNKSDLEDERVVAAAEARQLAEHYGIPYFETSAANGTNISQAIEMLLDLI 171 Query: 182 MKRMEQCVEKT 192 MKRME+ V+K+ Sbjct: 172 MKRMERSVDKS 182 >4RKF-A nrPDB Length = 190 Score = 179 bits (453), Expect = 1e-45, Method: Compositional matrix adjust. Identities = 81/185 (43%), Positives = 132/185 (71%), Gaps = 11/185 (5%) Query: 3 DGDYDYLIKLLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYNAQGPNGSS 62 D ++DY+ KLL +G+S VGKT+FL+RY D+ F F++TVGIDF+ K V + + Sbjct: 17 DQNFDYMFKLLIIGNSSVGKTSFLFRYADDSFTSAFVSTVGIDFKVKTVFRHDK------ 70 Query: 63 GKAFKVHLQLWDTAGQERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVRNWMSQLQANAY 122 +V LQ+WDTAG ER+R++TTA++R AMGF+LM+D+T++ SF +V++W++Q++ ++ Sbjct: 71 ----RVKLQIWDTAGLERYRTITTAYYRGAMGFILMYDVTNEDSFNSVQDWVTQIKTYSW 126 Query: 123 CENPDIVLIGNKADLPDQREVNERQARELADKYGIPYFETSAATGQNVEKAVETLLDLIM 182 +N ++L+GNK D+ DQR ++ + R+LAD+ G+ +FETSA NV+ E L+D+I Sbjct: 127 -DNAQVILVGNKCDMEDQRVISFERGRQLADQLGVEFFETSAKENVNVKAVFERLVDIIC 185 Query: 183 KRMEQ 187 +M + Sbjct: 186 DKMSE 190 >1ZBD-A nrPDB Length = 203 Score = 179 bits (453), Expect = 1e-45, Method: Compositional matrix adjust. Identities = 86/211 (40%), Positives = 141/211 (66%), Gaps = 15/211 (7%) Query: 6 YDYLIKLLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYNAQGPNGSSGKA 65 +DY+ K+L +G+S VGKT+FL+RY D+ F P F++TVGIDF+ K + N + Sbjct: 5 FDYMFKILIIGNSSVGKTSFLFRYADDSFTPAFVSTVGIDFKVKTIYRNDK--------- 55 Query: 66 FKVHLQLWDTAGQERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVRNWMSQLQANAYCEN 125 ++ LQ+WDTAG ER+R++TTA++R AMGF+LM+D+T+++SF V++W +Q++ ++ +N Sbjct: 56 -RIKLQIWDTAGLERYRTITTAYYRGAMGFILMYDITNEESFNAVQDWSTQIKTYSW-DN 113 Query: 126 PDIVLIGNKADLPDQREVNERQARELADKYGIPYFETSAATGQNVEKAVETLLDLIMKRM 185 ++L+GNK D+ D+R V+ + R+LAD G +FE SA NV++ E L+D+I ++M Sbjct: 114 AQVLLVGNKCDMEDERVVSSERGRQLADHLGFEFFEASAKDNINVKQTFERLVDVICEKM 173 Query: 186 EQCVEKTQIPDTVNGGNSGN--LDGEKPPEK 214 + ++ T P V G G D + PP + Sbjct: 174 SESLD-TADP-AVTGAKQGPQLTDQQAPPHQ 202 >2GF9-A nrPDB Length = 189 Score = 176 bits (446), Expect = 6e-45, Method: Compositional matrix adjust. Identities = 82/181 (45%), Positives = 125/181 (69%), Gaps = 11/181 (6%) Query: 7 DYLIKLLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYNAQGPNGSSGKAF 66 DY+ KLL +G+S VGKT+FL+RY D+ F P F++TVGIDF+ K V + + Sbjct: 20 DYMFKLLLIGNSSVGKTSFLFRYADDSFTPAFVSTVGIDFKVKTVYRHDK---------- 69 Query: 67 KVHLQLWDTAGQERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVRNWMSQLQANAYCENP 126 ++ LQ+WDTAGQER+R++TTA++R AMGFLLM+D+ +Q+SF V++W +Q++ ++ +N Sbjct: 70 RIKLQIWDTAGQERYRTITTAYYRGAMGFLLMYDIANQESFAAVQDWATQIKTYSW-DNA 128 Query: 127 DIVLIGNKADLPDQREVNERQARELADKYGIPYFETSAATGQNVEKAVETLLDLIMKRME 186 ++L+GNK DL D+R V R LAD G +FE SA NV++ E L+D+I ++M Sbjct: 129 QVILVGNKCDLEDERVVPAEDGRRLADDLGFEFFEASAKENINVKQVFERLVDVICEKMN 188 Query: 187 Q 187 + Sbjct: 189 E 189 >3RAB-A nrPDB Length = 169 Score = 176 bits (445), Expect = 9e-45, Method: Compositional matrix adjust. Identities = 78/180 (43%), Positives = 129/180 (71%), Gaps = 11/180 (6%) Query: 5 DYDYLIKLLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYNAQGPNGSSGK 64 ++DY+ K+L +G+S VGKT+FL+RY D+ F P F++TVGIDF+ K + N + Sbjct: 1 NFDYMFKILIIGNSSVGKTSFLFRYADDSFTPAFVSTVGIDFKVKTIYRNDK-------- 52 Query: 65 AFKVHLQLWDTAGQERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVRNWMSQLQANAYCE 124 ++ LQ+WDTAGQER+R++TTA++R AMGF+LM+D+T+++SF V++W +Q++ ++ + Sbjct: 53 --RIKLQIWDTAGQERYRTITTAYYRGAMGFILMYDITNEESFNAVQDWSTQIKTYSW-D 109 Query: 125 NPDIVLIGNKADLPDQREVNERQARELADKYGIPYFETSAATGQNVEKAVETLLDLIMKR 184 N ++L+GNK D+ D+R V+ + R+LAD G +FE SA NV++ E L+D+I ++ Sbjct: 110 NAQVLLVGNKCDMEDERVVSSERGRQLADHLGFEFFEASAKDNINVKQTFERLVDVICEK 169 >3DZ8-A nrPDB Length = 191 Score = 171 bits (433), Expect = 2e-43, Method: Compositional matrix adjust. Identities = 79/182 (43%), Positives = 128/182 (70%), Gaps = 11/182 (6%) Query: 4 GDYDYLIKLLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYNAQGPNGSSG 63 G++DY+ KLL +G+S VGKT+FL+RY D+ F P F++TVGIDF+ K V + + Sbjct: 18 GNFDYMFKLLIIGNSSVGKTSFLFRYADDTFTPAFVSTVGIDFKVKTVYRHEK------- 70 Query: 64 KAFKVHLQLWDTAGQERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVRNWMSQLQANAYC 123 +V LQ+WDTAGQER+R++TTA++R AMGF+LM+D+T+++SF V++W +Q++ ++ Sbjct: 71 ---RVKLQIWDTAGQERYRTITTAYYRGAMGFILMYDITNEESFNAVQDWATQIKTYSW- 126 Query: 124 ENPDIVLIGNKADLPDQREVNERQARELADKYGIPYFETSAATGQNVEKAVETLLDLIMK 183 +N ++L+GNK D+ ++R V + + LA++ G +FE SA +V +A E L+D I Sbjct: 127 DNAQVILVGNKCDMEEERVVPTEKGQLLAEQLGFDFFEASAKENISVRQAFERLVDAICD 186 Query: 184 RM 185 +M Sbjct: 187 KM 188 >4LHX-A nrPDB Length = 186 Score = 170 bits (430), Expect = 5e-43, Method: Compositional matrix adjust. Identities = 81/185 (43%), Positives = 128/185 (69%), Gaps = 11/185 (5%) Query: 6 YDYLIKLLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYNAQGPNGSSGKA 65 YDYL KLL +GDSGVGKT L+R++++ FN FI+T+GIDF+ + + + + Sbjct: 7 YDYLFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGK--------- 57 Query: 66 FKVHLQLWDTAGQERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVRNWMSQLQANAYCEN 125 ++ LQ+WDTAGQERFR++TTA++R AMG +L++D+T+++SF N+RNW+ ++ +A + Sbjct: 58 -RIKLQIWDTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIRNWIRNIEEHASADV 116 Query: 126 PDIVLIGNKADLPDQREVNERQARELADKYGIPYFETSAATGQNVEKAVETLLDLIMKRM 185 ++L GNK D+ D+R+V++ + +LA YGI + ETSA NVE A TL I +M Sbjct: 117 EKMIL-GNKCDVNDKRQVSKERGEKLALDYGIKFMETSAKANINVENAFFTLARDIKAKM 175 Query: 186 EQCVE 190 ++ +E Sbjct: 176 DKKLE 180 >5SZI-A nrPDB Length = 209 Score = 170 bits (430), Expect = 5e-43, Method: Compositional matrix adjust. Identities = 81/185 (43%), Positives = 128/185 (69%), Gaps = 11/185 (5%) Query: 6 YDYLIKLLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYNAQGPNGSSGKA 65 YDYL KLL +GDSGVGKT L+R++++ FN FI+T+GIDF+ + + + + Sbjct: 7 YDYLFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGK--------- 57 Query: 66 FKVHLQLWDTAGQERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVRNWMSQLQANAYCEN 125 ++ LQ+WDTAGQERFR++TTA++R AMG +L++D+T+++SF N+RNW+ ++ +A + Sbjct: 58 -RIKLQIWDTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIRNWIRNIEEHASADV 116 Query: 126 PDIVLIGNKADLPDQREVNERQARELADKYGIPYFETSAATGQNVEKAVETLLDLIMKRM 185 ++L GNK D+ D+R+V++ + +LA YGI + ETSA NVE A TL I +M Sbjct: 117 EKMIL-GNKCDVNDKRQVSKERGEKLALDYGIKFMETSAKANINVENAFFTLARDIKAKM 175 Query: 186 EQCVE 190 ++ +E Sbjct: 176 DKKLE 180 >5SZH-B nrPDB Length = 203 Score = 166 bits (421), Expect = 5e-42, Method: Compositional matrix adjust. Identities = 85/210 (40%), Positives = 130/210 (61%), Gaps = 19/210 (9%) Query: 5 DYDYLIKLLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYNAQGPNGSSGK 64 +YDYL KLL +GDSGVGK+ L R+ D+ + +I+T+G+DF+ + + + GK Sbjct: 6 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELD--------GK 57 Query: 65 AFKVHLQLWDTAGQERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVRNWMSQLQANAYCE 124 K LQ+WDTAGQERFR++T++++R A G ++++D+T Q+S+ NV+ W+ ++ A E Sbjct: 58 TIK--LQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESYANVKQWLQEIDRYA-SE 114 Query: 125 NPDIVLIGNKADLPDQREVNERQARELADKYGIPYFETSAATGQNVEKAVETLLDLIMKR 184 N + +L+GNK+DL ++ V+ A+E AD GIP+ ETSA NVE+A T+ I KR Sbjct: 115 NVNKLLVGNKSDLTTKKVVDNTTAKEFADSLGIPFLETSAKNATNVEQAFMTMAAEIKKR 174 Query: 185 MEQCVEKTQIPDTVNGGNSGNLDGEKPPEK 214 M P +GG NL + P K Sbjct: 175 MG--------PGAASGGERPNLKIDSTPVK 196 >6O62-A nrPDB Length = 184 Score = 163 bits (412), Expect = 6e-41, Method: Compositional matrix adjust. Identities = 80/179 (44%), Positives = 119/179 (66%), Gaps = 11/179 (6%) Query: 6 YDYLIKLLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYNAQGPNGSSGKA 65 YD ++KLL +GDSGVGK+ L R+ ++KFNP FITT+GIDF+ + + S GK Sbjct: 11 YDMIMKLLLVGDSGVGKSCLLLRFVEDKFNPSFITTIGIDFKIRTI--------ESKGK- 61 Query: 66 FKVHLQLWDTAGQERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVRNWMSQLQANAYCEN 125 ++ LQ+WDTAGQERFR++TTA++R AMG +L++D+T +SF NV NW + +A E+ Sbjct: 62 -RIKLQVWDTAGQERFRTITTAYYRGAMGIVLIYDVTDSRSFENVENWFQTVTQHA-NED 119 Query: 126 PDIVLIGNKADLPDQREVNERQARELADKYGIPYFETSAATGQNVEKAVETLLDLIMKR 184 I L+GNK D R+V++ Q +ELA K +P+ E SA + +NV+ L +I ++ Sbjct: 120 AQIFLVGNKCDDEVNRQVSKEQGQELAAKLNVPFLEASAKSNENVDSIFYELASIIQEK 178 >5SZJ-A nrPDB Length = 202 Score = 162 bits (411), Expect = 7e-41, Method: Compositional matrix adjust. Identities = 84/201 (41%), Positives = 130/201 (64%), Gaps = 11/201 (5%) Query: 1 MTDGDYDYLIKLLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYNAQGPNG 60 M YD L KLL +GDSGVGKT L+R++D+ FN FI+T+GIDF+ K V QG Sbjct: 3 MAKKTYDLLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTV--ELQGK-- 58 Query: 61 SSGKAFKVHLQLWDTAGQERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVRNWMSQLQAN 120 K+ LQ+WDTAGQERF ++TT+++R AMG +L++D+T+ +SF N+ W+ + + Sbjct: 59 ------KIKLQIWDTAGQERFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNIDEH 112 Query: 121 AYCENPDIVLIGNKADLPDQREVNERQARELADKYGIPYFETSAATGQNVEKAVETLLDL 180 A E+ + +L+GNK D+ D+R V + + ++A ++GI +FETSA N+EKA TL + Sbjct: 113 AN-EDVERMLLGNKCDMDDKRVVPKGKGEQIAREHGIRFFETSAKANINIEKAFLTLAED 171 Query: 181 IMKRMEQCVEKTQIPDTVNGG 201 I+++ ++ D +GG Sbjct: 172 ILRKTPVKEPNSENVDISSGG 192 >3CPH-A nrPDB Length = 213 Score = 162 bits (410), Expect = 1e-40, Method: Compositional matrix adjust. Identities = 80/182 (43%), Positives = 120/182 (65%), Gaps = 12/182 (6%) Query: 6 YDYLIKLLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYNAQGPNGSSGKA 65 YD ++K+L +GDSGVGK+ L R+ ++KFNP FITT+GIDF+ K V N + Sbjct: 17 YDSIMKILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGK--------- 67 Query: 66 FKVHLQLWDTAGQERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVRNWMSQLQANAYCEN 125 KV LQLWDTAGQERFR++TTA++R AMG +L++D+T +++F N++ W + +A E Sbjct: 68 -KVKLQLWDTAGQERFRTITTAYYRGAMGIILVYDVTDERTFTNIKQWFKTVNEHANDE- 125 Query: 126 PDIVLIGNKADLPDQREVNERQARELADKYGIPYFETSAATGQNVEKAVETLLDLIMKRM 185 ++L+GNK+D+ + R V Q LA + GIP+ E+SA NV + TL LI +++ Sbjct: 126 AQLLLVGNKSDM-ETRVVTADQGEALAKELGIPFIESSAKNDDNVNEIFFTLAKLIQEKI 184 Query: 186 EQ 187 + Sbjct: 185 DS 186 >5LPN-A nrPDB Length = 177 Score = 161 bits (408), Expect = 2e-40, Method: Compositional matrix adjust. Identities = 81/184 (44%), Positives = 124/184 (67%), Gaps = 11/184 (5%) Query: 1 MTDGDYDYLIKLLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYNAQGPNG 60 M YD L KLL +GDSGVGKT L+R++D+ FN FI+T+GIDF+ K V QG Sbjct: 3 MAKKTYDLLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTV--ELQGK-- 58 Query: 61 SSGKAFKVHLQLWDTAGQERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVRNWMSQLQAN 120 K+ LQ+WDTAGQERF ++TT+++R AMG +L++D+T+ +SF N+ W+ + + Sbjct: 59 ------KIKLQIWDTAGQERFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNIDEH 112 Query: 121 AYCENPDIVLIGNKADLPDQREVNERQARELADKYGIPYFETSAATGQNVEKAVETLLDL 180 A E+ + +L+GNK D+ D+R V + + ++A ++GI +FETSA N+EKA TL + Sbjct: 113 A-NEDVERMLLGNKCDMDDKRVVPKGKGEQIAREHGIRFFETSAKANINIEKAFLTLAED 171 Query: 181 IMKR 184 I+++ Sbjct: 172 ILRK 175 >3L0I-B nrPDB Length = 199 Score = 160 bits (405), Expect = 4e-40, Method: Compositional matrix adjust. Identities = 78/181 (43%), Positives = 120/181 (66%), Gaps = 11/181 (6%) Query: 5 DYDYLIKLLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYNAQGPNGSSGK 64 +YDYL KLL +GDSGVGK+ L R+ D+ + +I+T+G+DF+ + + + GK Sbjct: 29 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELD--------GK 80 Query: 65 AFKVHLQLWDTAGQERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVRNWMSQLQANAYCE 124 K LQ+WDTAGQERFR++T++++R A G ++++D+T Q+SF NV+ W+ ++ A E Sbjct: 81 TIK--LQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYA-SE 137 Query: 125 NPDIVLIGNKADLPDQREVNERQARELADKYGIPYFETSAATGQNVEKAVETLLDLIMKR 184 N + +L+GNK DL ++ V+ A+E AD GIP+ ETSA NVE++ T+ I KR Sbjct: 138 NVNKLLVGNKCDLTTKKVVDYTTAKEFADSLGIPFLETSAKNATNVEQSFMTMAAEIKKR 197 Query: 185 M 185 M Sbjct: 198 M 198 >2RHD-A nrPDB Length = 175 Score = 159 bits (402), Expect = 9e-40, Method: Compositional matrix adjust. Identities = 77/182 (42%), Positives = 119/182 (65%), Gaps = 11/182 (6%) Query: 5 DYDYLIKLLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYNAQGPNGSSGK 64 +YDYL KLL +GDSGVGK+ L R+ D+ + +I+T+G+DF+ + + S + Sbjct: 5 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTDSYISTIGVDFKIRTI----------SLE 54 Query: 65 AFKVHLQLWDTAGQERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVRNWMSQLQANAYCE 124 V LQ+WDTAGQERFR++T++++R A G ++++D+T + SF NV+ W+ ++ A E Sbjct: 55 NKTVKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDRDSFDNVKQWIQEIDRYA-ME 113 Query: 125 NPDIVLIGNKADLPDQREVNERQARELADKYGIPYFETSAATGQNVEKAVETLLDLIMKR 184 N + +L+GNK DL +R V + RELAD +GI + ETSA NVE+A T+ I KR Sbjct: 114 NVNKLLVGNKCDLVSKRVVTSDEGRELADSHGIKFIETSAKNAYNVEQAFHTMAGEIKKR 173 Query: 185 ME 186 ++ Sbjct: 174 VQ 175 >2OCY-C nrPDB Length = 170 Score = 158 bits (399), Expect = 2e-39, Method: Compositional matrix adjust. Identities = 79/180 (43%), Positives = 119/180 (66%), Gaps = 12/180 (6%) Query: 7 DYLIKLLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYNAQGPNGSSGKAF 66 D ++K+L +GDSGVGK+ L R+ ++KFNP FITT+GIDF+ K V N + Sbjct: 1 DSIMKILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGK---------- 50 Query: 67 KVHLQLWDTAGQERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVRNWMSQLQANAYCENP 126 KV LQLWDTAGQERFR++TTA++R AMG +L++D+T +++F N++ W + +A E Sbjct: 51 KVKLQLWDTAGQERFRTITTAYYRGAMGIILVYDVTDERTFTNIKQWFKTVNEHANDE-A 109 Query: 127 DIVLIGNKADLPDQREVNERQARELADKYGIPYFETSAATGQNVEKAVETLLDLIMKRME 186 ++L+GNK+D+ + R V Q LA + GIP+ E+SA NV + TL LI ++++ Sbjct: 110 QLLLVGNKSDM-ETRVVTADQGEALAKELGIPFIESSAKNDDNVNEIFFTLAKLIQEKID 168 >2WWX-A nrPDB Length = 175 Score = 157 bits (396), Expect = 5e-39, Method: Compositional matrix adjust. Identities = 77/181 (42%), Positives = 119/181 (65%), Gaps = 11/181 (6%) Query: 5 DYDYLIKLLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYNAQGPNGSSGK 64 +YDYL KLL +GDSGVGK+ L R+ D+ + +I+T+G+DF+ + + + GK Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELD--------GK 55 Query: 65 AFKVHLQLWDTAGQERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVRNWMSQLQANAYCE 124 K LQ+WDTAGQERFR++T++++R A G ++++D+T Q+SF NV+ W+ ++ A E Sbjct: 56 TIK--LQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYA-SE 112 Query: 125 NPDIVLIGNKADLPDQREVNERQARELADKYGIPYFETSAATGQNVEKAVETLLDLIMKR 184 N + +L+G K DL ++ V+ A+E AD GIP+ ETSA NVE++ T+ I KR Sbjct: 113 NVNKLLVGIKCDLTTKKVVDYTTAKEFADSLGIPFLETSAKNATNVEQSFMTMAAEIKKR 172 Query: 185 M 185 M Sbjct: 173 M 173 >6IF2-B nrPDB Length = 186 Score = 156 bits (395), Expect = 6e-39, Method: Compositional matrix adjust. Identities = 75/189 (39%), Positives = 121/189 (64%), Gaps = 12/189 (6%) Query: 5 DYDYLIKLLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYNAQGPNGSSGK 64 DYD+L KLL +GDSGVGK++ L R+ DN F+ +ITT+G+DF+ + V N + Sbjct: 10 DYDHLFKLLIIGDSGVGKSSLLLRFADNTFSGSYITTIGVDFKIRTVEINGE-------- 61 Query: 65 AFKVHLQLWDTAGQERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVRNWMSQLQANAYCE 124 KV LQ+WDTAG ERFR++T+ ++R G ++++D+TS +SF+NV+ W+ ++ N C+ Sbjct: 62 --KVKLQIWDTAGLERFRTITSTYYRGTHGVIVVYDVTSAESFVNVKRWLHEINQN--CD 117 Query: 125 NPDIVLIGNKADLPDQREVNERQARELADKYGIPYFETSAATGQNVEKAVETLLDLIMKR 184 + +L+GNK D P+++ V A + A + GI FETSA NVE+ + +L+++ Sbjct: 118 DVCRILVGNKNDDPERKVVETEDAYKFAGQMGIQLFETSAKENVNVEEMFNCITELVLRA 177 Query: 185 MEQCVEKTQ 193 + + K Q Sbjct: 178 KKDNLAKQQ 186 >2G6B-A nrPDB Length = 180 Score = 147 bits (370), Expect = 5e-36, Method: Compositional matrix adjust. Identities = 78/180 (43%), Positives = 112/180 (62%), Gaps = 12/180 (6%) Query: 6 YDYLIKLLALGDSGVGKTTFLYRYTDNKF-NPKFITTVGIDFREKRVVYNAQGPNGSSGK 64 YD K++ +GDSGVGKT L R+ D F FI+TVGIDFR K V + G Sbjct: 7 YDVAFKVMLVGDSGVGKTCLLVRFKDGAFLAGTFISTVGIDFRNK--VLDVDG------- 57 Query: 65 AFKVHLQLWDTAGQERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVRNWMSQLQANAYCE 124 KV LQ+WDTAGQERFRS+T A++RDA LL++D+T++ SF N++ W++++ A Sbjct: 58 -VKVKLQMWDTAGQERFRSVTHAYYRDAHALLLLYDVTNKASFDNIQAWLTEIHEYAQ-H 115 Query: 125 NPDIVLIGNKADLPDQREVNERQARELADKYGIPYFETSAATGQNVEKAVETLLDLIMKR 184 + ++L+GNK D +R V +LA +YG+P+ ETSA TG NV+ A + + +R Sbjct: 116 DVALMLLGNKVDSAHERVVKREDGEKLAKEYGLPFMETSAKTGLNVDLAFTAIAKELKRR 175 >3CUE-F nrPDB Length = 206 Score = 146 bits (368), Expect = 8e-36, Method: Compositional matrix adjust. Identities = 73/186 (39%), Positives = 118/186 (63%), Gaps = 13/186 (6%) Query: 3 DGDYDYLIKLLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYNAQGPNGSS 62 + +YDYL KLL +G+SGVGK+ L R++D+ + +I+T+G+DF+ K V + + Sbjct: 2 NSEYDYLFKLLLIGNSGVGKSCLLLRFSDDTYTNDYISTIGVDFKIKTVELDGK------ 55 Query: 63 GKAFKVHLQLWDTAGQERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVRNWMSQLQANAY 122 V LQ+WDTAGQERFR++T++++R + G ++++D+T Q+SF V+ W+ ++ + Y Sbjct: 56 ----TVKLQIWDTAGQERFRTITSSYYRGSHGIIIVYDVTDQESFNGVKMWLQEI--DRY 109 Query: 123 CENPDI-VLIGNKADLPDQREVNERQARELADKYGIPYFETSAATGQNVEKAVETLLDLI 181 + + +L+GNK DL D+R V A+E AD +P+ ETSA NVE A T+ I Sbjct: 110 ATSTVLKLLVGNKCDLKDKRVVEYDVAKEFADANKMPFLETSALDSTNVEDAFLTMARQI 169 Query: 182 MKRMEQ 187 + M Q Sbjct: 170 KESMSQ 175 >5FBL-B nrPDB Length = 221 Score = 145 bits (367), Expect = 1e-35, Method: Compositional matrix adjust. Identities = 75/185 (40%), Positives = 118/185 (63%), Gaps = 11/185 (5%) Query: 3 DGDYDYLIKLLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYNAQGPNGSS 62 D +YDYL K++ +GDSGVGK+ L R+T N+FN + +T+G++F + + + Sbjct: 10 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVD-------- 61 Query: 63 GKAFKVHLQLWDTAGQERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVRNWMSQLQANAY 122 GK K Q+WDTAGQER+R++T+A++R A+G LL++D+ ++ NV W+ +L+ +A Sbjct: 62 GKTIKA--QIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHA- 118 Query: 123 CENPDIVLIGNKADLPDQREVNERQARELADKYGIPYFETSAATGQNVEKAVETLLDLIM 182 N I+L+GNK+DL R V +AR A+K G+ + ETSA NVE A +T+L I Sbjct: 119 DSNIVIMLVGNKSDLRHLRAVPTDEARAFAEKNGLSFIETSALDSTNVEAAFQTILTEIY 178 Query: 183 KRMEQ 187 + + Q Sbjct: 179 RIVSQ 183 >3BFK-A nrPDB Length = 181 Score = 143 bits (361), Expect = 5e-35, Method: Compositional matrix adjust. Identities = 77/179 (43%), Positives = 115/179 (64%), Gaps = 11/179 (6%) Query: 4 GDY-DYLIKLLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYNAQGPNGSS 62 GDY DYL K++ +GDSGVGK+ L R+T ++FN + +T+G++F K + Q N Sbjct: 1 GDYYDYLFKIVLIGDSGVGKSNLLSRFTRDEFNLESKSTIGVEFATKSI----QLKNNKI 56 Query: 63 GKAFKVHLQLWDTAGQERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVRNWMSQLQANAY 122 KA Q+WDTAGQER+R++T+A++R A+G LL++D+T + SF N+ W+ +L+ NA Sbjct: 57 IKA-----QIWDTAGQERYRAITSAYYRGAVGALLVYDITKKNSFENIEKWLKELRDNA- 110 Query: 123 CENPDIVLIGNKADLPDQREVNERQARELADKYGIPYFETSAATGQNVEKAVETLLDLI 181 N I+L+GNK+DL R +N+ A + A K + + ETSA NVE A LL+ I Sbjct: 111 DSNIVILLVGNKSDLKHLRVINDNDATQYAKKEKLAFIETSALEATNVELAFHQLLNEI 169 >3CPJ-B nrPDB Length = 223 Score = 142 bits (359), Expect = 8e-35, Method: Compositional matrix adjust. Identities = 76/213 (35%), Positives = 128/213 (60%), Gaps = 16/213 (7%) Query: 5 DYDYLIKLLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYNAQGPNGSSGK 64 DYD L K++ +GDSGVGK+ L R+T N+FN +T+G++F + + + Sbjct: 9 DYDLLFKIVLIGDSGVGKSNLLSRFTKNEFNMDSKSTIGVEFATRTLEIEGK-------- 60 Query: 65 AFKVHLQLWDTAGQERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVRNWMSQLQANAYCE 124 ++ Q+WDTAGQER+R++T+A++R A+G L+++D++ S+ N +W+S+L+ NA + Sbjct: 61 --RIKAQIWDTAGQERYRAITSAYYRGAVGALIVYDISKSSSYENCNHWLSELRENA-DD 117 Query: 125 NPDIVLIGNKADLPDQREVNERQARELADKYGIPYFETSAATGQNVEKAVETLLDLIMKR 184 N + LIGNK+DL R V +++ A + + + ETSA +NV+KA E L++ I ++ Sbjct: 118 NVAVGLIGNKSDLAHLRAVPTEESKTFAQENQLLFTETSALNSENVDKAFEELINTIYQK 177 Query: 185 MEQCVEKTQIPDTVNGGNSGNLDGEKPPEKKCI 217 V K Q+ D + +GN +G P I Sbjct: 178 ----VSKHQM-DLGDSSANGNANGASAPNGPTI 205 >4UJ4-A nrPDB Length = 185 Score = 142 bits (358), Expect = 1e-34, Method: Compositional matrix adjust. Identities = 74/185 (40%), Positives = 117/185 (63%), Gaps = 11/185 (5%) Query: 3 DGDYDYLIKLLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYNAQGPNGSS 62 D +YDYL K++ +GDSGVGK+ L R+T N+FN + +T+G++F + + + Sbjct: 4 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVD-------- 55 Query: 63 GKAFKVHLQLWDTAGQERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVRNWMSQLQANAY 122 GK K Q+WDTAG ER+R++T+A++R A+G LL++D+ ++ NV W+ +L+ +A Sbjct: 56 GKTIKA--QIWDTAGLERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHA- 112 Query: 123 CENPDIVLIGNKADLPDQREVNERQARELADKYGIPYFETSAATGQNVEKAVETLLDLIM 182 N I+L+GNK+DL R V +AR A+K G+ + ETSA NVE A +T+L I Sbjct: 113 DSNIVIMLVGNKSDLRHLRAVPTDEARAFAEKNGLSFIETSALDSTNVEAAFQTILTEIY 172 Query: 183 KRMEQ 187 + + Q Sbjct: 173 RIVSQ 177 >1YZN-A nrPDB Length = 185 Score = 142 bits (358), Expect = 1e-34, Method: Compositional matrix adjust. Identities = 70/173 (40%), Positives = 110/173 (63%), Gaps = 11/173 (6%) Query: 5 DYDYLIKLLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYNAQGPNGSSGK 64 +YDYL KLL +G+SGVGK+ L R++D+ + +I+T+G+DF+ K V + + Sbjct: 17 EYDYLFKLLLIGNSGVGKSCLLLRFSDDTYTNDYISTIGVDFKIKTVELDGK-------- 68 Query: 65 AFKVHLQLWDTAGQERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVRNWMSQLQANAYCE 124 V LQ+WDTAGQERFR++T++++R + G ++++D+T Q+SF V+ W+ ++ A Sbjct: 69 --TVKLQIWDTAGQERFRTITSSYYRGSHGIIIVYDVTDQESFNGVKMWLQEIDRYATST 126 Query: 125 NPDIVLIGNKADLPDQREVNERQARELADKYGIPYFETSAATGQNVEKAVETL 177 + L+GNK DL D+R V A+E AD +P+ ETSA NVE A T+ Sbjct: 127 VLKL-LVGNKCDLKDKRVVEYDVAKEFADANKMPFLETSALDSTNVEDAFLTM 178 >2F9L-A nrPDB Length = 199 Score = 140 bits (352), Expect = 5e-34, Method: Compositional matrix adjust. Identities = 81/210 (38%), Positives = 124/210 (59%), Gaps = 18/210 (8%) Query: 6 YDYLIKLLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYNAQGPNGSSGKA 65 YDYL K++ +GDSGVGK+ L R+T N+FN + +T+G++F + + + GK Sbjct: 2 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVD--------GKT 53 Query: 66 FKVHLQLWDTAGQERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVRNWMSQLQANAYCEN 125 K Q+WDTAGQER+R +T+A++R A+G LL++D+ ++ NV W+ +L+ +A N Sbjct: 54 IKA--QIWDTAGQERYRRITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHA-DSN 110 Query: 126 PDIVLIGNKADLPDQREVNERQARELADKYGIPYFETSAATGQNVEKAVETLLDLIMKRM 185 I+L+GNK+DL R V +AR A+K + + ETSA NVE+A + +L I + Sbjct: 111 IVIMLVGNKSDLRHLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYR-- 168 Query: 186 EQCVEKTQIPDTVNGGNS-GN--LDGEKPP 212 V + QI D S GN +D PP Sbjct: 169 --IVSQKQIADRAAHDESPGNNVVDISVPP 196 >3TSO-A nrPDB Length = 178 Score = 139 bits (350), Expect = 8e-34, Method: Compositional matrix adjust. Identities = 71/183 (38%), Positives = 112/183 (61%), Gaps = 11/183 (6%) Query: 5 DYDYLIKLLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYNAQGPNGSSGK 64 DY+++ K++ +G+SGVGKT L R+T N+F+ TT+G++F + V+ Sbjct: 6 DYNFVFKVVLIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVMLGTAA------- 58 Query: 65 AFKVHLQLWDTAGQERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVRNWMSQLQANAYCE 124 V Q+WDTAG ER+R++T+A++R A+G LL+FDLT Q++ V W+ +L +A Sbjct: 59 ---VKAQIWDTAGLERYRAITSAYYRGAVGALLVFDLTKHQTYAVVERWLKELYDHAEA- 114 Query: 125 NPDIVLIGNKADLPDQREVNERQARELADKYGIPYFETSAATGQNVEKAVETLLDLIMKR 184 ++L+GNK+DL REV +AR A+ G+ + ETSA NVE A ET+L I + Sbjct: 115 TIVVMLVGNKSDLSQAREVPTEEARMFAENNGLLFLETSALDSTNVELAFETVLKEIFAK 174 Query: 185 MEQ 187 + + Sbjct: 175 VSK 177 >2EW1-A nrPDB Length = 201 Score = 137 bits (344), Expect = 4e-33, Method: Compositional matrix adjust. Identities = 74/191 (38%), Positives = 115/191 (60%), Gaps = 16/191 (8%) Query: 5 DYDYLIKLLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYNAQGPNGSSGK 64 DYD+L K++ +G++GVGKT + R+T F P T+G+DF K V N + Sbjct: 22 DYDFLFKIVLIGNAGVGKTCLVRRFTQGLFPPGQGATIGVDFMIKTVEINGE-------- 73 Query: 65 AFKVHLQLWDTAGQERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVRNWMSQLQANAYCE 124 KV LQ+WDTAGQERFRS+T +++R A +L +D+T ++SF + W+ +++ Y Sbjct: 74 --KVKLQIWDTAGQERFRSITQSYYRSANALILTYDITCEESFRCLPEWLREIE--QYAS 129 Query: 125 NPDI-VLIGNKADLPDQREVNERQARELADKYGIPYFETSAATGQNVEKAVETLLDLIMK 183 N I VL+GNK DL ++REV++++A E ++ + Y ETSA NVEK LDL + Sbjct: 130 NKVITVLVGNKIDLAERREVSQQRAEEFSEAQDMYYLETSAKESDNVEK---LFLDLACR 186 Query: 184 RMEQCVEKTQI 194 + + + T + Sbjct: 187 LISEARQNTLV 197 >1X3S-A nrPDB Length = 195 Score = 135 bits (341), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 69/183 (37%), Positives = 114/183 (62%), Gaps = 15/183 (8%) Query: 3 DGDYDYLIKLLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYNAQGPNGSS 62 D D +K+L +G+SGVGK++ L R+TD+ F+P+ T+G+DF+ K + + Sbjct: 9 DEDVLTTLKILIIGESGVGKSSLLLRFTDDTFDPELAATIGVDFKVKTISVDGN------ 62 Query: 63 GKAFKVHLQLWDTAGQERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVRNWMSQLQANAY 122 K L +WDTAGQERFR+LT +++R A G +L++D+T + +F+ + NW+++L+ Y Sbjct: 63 ----KAKLAIWDTAGQERFRTLTPSYYRGAQGVILVYDVTRRDTFVKLDNWLNELE--TY 116 Query: 123 CENPDIV--LIGNKADLPDQREVNERQARELADKYGIPYFETSAATGQNVEKAVETLLDL 180 C DIV L+GNK D + REV+ + + A K+ + + E SA T V+ A E L++ Sbjct: 117 CTRNDIVNMLVGNKID-KENREVDRNEGLKFARKHSMLFIEASAKTCDGVQCAFEELVEK 175 Query: 181 IMK 183 I++ Sbjct: 176 IIQ 178 >5XR6-A nrPDB Length = 194 Score = 135 bits (340), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 73/180 (40%), Positives = 108/180 (60%), Gaps = 15/180 (8%) Query: 6 YDYLIKLLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYNAQGPNGSSGKA 65 YDYL KL+ +GDSGVGK+ L R+T N+FN + +T+G++F A GK Sbjct: 22 YDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEF--------ATKTTKVEGKV 73 Query: 66 FKVHLQLWDTAGQERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVRNWMSQLQANAYCEN 125 K Q+WDTAGQER+R++T+A++R A+G LL++D+T +F N W+ +L+ + + Sbjct: 74 VKA--QIWDTAGQERYRAITSAYYRGAVGALLIYDVTRHATFENAARWLRELRGHT---D 128 Query: 126 PDIV--LIGNKADLPDQREVNERQARELADKYGIPYFETSAATGQNVEKAVETLLDLIMK 183 P+IV LIGNK DL V +A+ A++ + + ETSA NVE A +L I K Sbjct: 129 PNIVVMLIGNKCDLRHLVAVKTEEAKAFAERESLYFMETSALDATNVENAFTEVLTQIHK 188 >1Z0F-A nrPDB Length = 179 Score = 132 bits (333), Expect = 8e-32, Method: Compositional matrix adjust. Identities = 64/169 (37%), Positives = 109/169 (64%), Gaps = 11/169 (6%) Query: 5 DYDYLIKLLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYNAQGPNGSSGK 64 +Y Y+ K + +GD GVGK+ L+++T+ KF T+G++F + + + Q Sbjct: 11 NYSYIFKYIIIGDMGVGKSCLLHQFTEKKFMADCPHTIGVEFGTRIIEVSGQ-------- 62 Query: 65 AFKVHLQLWDTAGQERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVRNWMSQLQANAYCE 124 K+ LQ+WDTAGQERFR++T +++R A G L+++D+T + ++ ++ +W++ + N Sbjct: 63 --KIKLQIWDTAGQERFRAVTRSYYRGAAGALMVYDITRRSTYNHLSSWLTDAR-NLTNP 119 Query: 125 NPDIVLIGNKADLPDQREVNERQARELADKYGIPYFETSAATGQNVEKA 173 N I+LIGNKADL QR+V +A++ A++ G+ + E SA TG+NVE A Sbjct: 120 NTVIILIGNKADLEAQRDVTYEEAKQFAEENGLLFLEASAKTGENVEDA 168 >3RWM-B nrPDB Length = 185 Score = 132 bits (333), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 70/190 (36%), Positives = 116/190 (61%), Gaps = 15/190 (7%) Query: 5 DYDYLIKLLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYNAQGPNGSSGK 64 DYDYL K++ +GDSGVGK+ L R+T ++FN + +T+G++F + + + Sbjct: 6 DYDYLFKIVLIGDSGVGKSNLLSRFTTDEFNIESKSTIGVEFATRTIEVENK-------- 57 Query: 65 AFKVHLQLWDTAGQERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVRNWMSQLQANAYCE 124 K+ Q+WDTAG ER+R++T+A++R A+G L+++D++ S+ N +W+++L+ NA + Sbjct: 58 --KIKAQIWDTAGLERYRAITSAYYRGAVGALIVYDISKSSSYENCNHWLTELRENA-DD 114 Query: 125 NPDIVLIGNKADLPDQREVNERQARELADKYGIPYFETSAATGQNVEKAVETLLDLIMKR 184 N + LIGNK+DL R V +A+ A + + + ETSA NV+KA L+ I Sbjct: 115 NVAVGLIGNKSDLAHLRAVPTDEAKNFAMENQMLFTETSALNSDNVDKAFRELIVAIF-- 172 Query: 185 MEQCVEKTQI 194 Q V K Q+ Sbjct: 173 --QMVSKHQV 180 >1Z0A-A nrPDB Length = 174 Score = 132 bits (331), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 63/168 (37%), Positives = 105/168 (62%), Gaps = 11/168 (6%) Query: 6 YDYLIKLLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYNAQGPNGSSGKA 65 Y YL K + +GD+GVGK+ L ++TD +F P T+G++F + + + + Sbjct: 7 YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGK--------- 57 Query: 66 FKVHLQLWDTAGQERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVRNWMSQLQANAYCEN 125 ++ LQ+WDTAGQE FRS+T +++R A G LL++D+T + +F ++ W+ + ++ N Sbjct: 58 -QIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLTTWLEDARQHS-NSN 115 Query: 126 PDIVLIGNKADLPDQREVNERQARELADKYGIPYFETSAATGQNVEKA 173 I+LIGNK+DL +REV + + A ++G+ + ETSA T NVE+A Sbjct: 116 MVIMLIGNKSDLESRREVKKEEGEAFAREHGLIFMETSAKTASNVEEA 163 >2P5S-A nrPDB Length = 199 Score = 130 bits (327), Expect = 5e-31, Method: Compositional matrix adjust. Identities = 71/180 (39%), Positives = 107/180 (59%), Gaps = 17/180 (9%) Query: 11 KLLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYNAQGPNGSSGKAFKVHL 70 K++ GD+ VGK++FL R N+F T+G+DF+ K ++ + + + L Sbjct: 30 KIVLAGDAAVGKSSFLMRLCKNEFRENISATLGVDFQMKTLIVDGE----------RTVL 79 Query: 71 QLWDTAGQERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVRNWMSQLQANAYCENPDIVL 130 QLWDTAGQERFRS+ ++FR A G LL++D+T ++SFLN+R W+ ++ A+ E I+L Sbjct: 80 QLWDTAGQERFRSIAKSYFRKADGVLLLYDVTCEKSFLNIREWVDMIEDAAH-ETVPIML 138 Query: 131 IGNKADLPD------QREVNERQARELADKYGIPYFETSAATGQNVEKAVETLLDLIMKR 184 +GNKAD+ D Q+ V +LA YG + ETSA G N+ +AV L + KR Sbjct: 139 VGNKADIRDTAATEGQKCVPGHFGEKLAMTYGALFCETSAKDGSNIVEAVLHLAREVKKR 198 >2A5J-A nrPDB Length = 191 Score = 130 bits (326), Expect = 6e-31, Method: Compositional matrix adjust. Identities = 66/180 (36%), Positives = 111/180 (61%), Gaps = 11/180 (6%) Query: 8 YLIKLLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYNAQGPNGSSGKAFK 67 YL K + +GD+GVGK+ L ++TD +F P T+G++F + V N G + Sbjct: 20 YLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMV--NIDGK--------Q 69 Query: 68 VHLQLWDTAGQERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVRNWMSQLQANAYCENPD 127 + LQ+WDTAGQE FRS+T +++R A G LL++D+T +++F ++ +W+ + ++ N Sbjct: 70 IKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLTSWLEDARQHS-SSNMV 128 Query: 128 IVLIGNKADLPDQREVNERQARELADKYGIPYFETSAATGQNVEKAVETLLDLIMKRMEQ 187 I+LIGNK+DL +R+V + A ++G+ + ETSA T NVE+A I ++++Q Sbjct: 129 IMLIGNKSDLESRRDVKREEGEAFAREHGLIFMETSAKTACNVEEAFINTAKEIYRKIQQ 188 >4RKE-A nrPDB Length = 176 Score = 129 bits (324), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 62/168 (36%), Positives = 105/168 (62%), Gaps = 11/168 (6%) Query: 6 YDYLIKLLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYNAQGPNGSSGKA 65 Y YL K + +GD+GVGK+ L ++TD +F P T+G++F + + + + Sbjct: 7 YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGK--------- 57 Query: 66 FKVHLQLWDTAGQERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVRNWMSQLQANAYCEN 125 ++ LQ+WDTAG E FRS+T +++R A G LL++D+T +++F ++ W+ + ++ N Sbjct: 58 -QIKLQIWDTAGLEAFRSITRSYYRGAAGALLVYDITRRETFNHLTTWLEDARQHS-NSN 115 Query: 126 PDIVLIGNKADLPDQREVNERQARELADKYGIPYFETSAATGQNVEKA 173 I+LIGNK+DL +REV + + A ++G+ + ETSA T NVE+A Sbjct: 116 MVIMLIGNKSDLDSRREVKKEEGEAFAREHGLVFMETSARTAANVEEA 163 >2BMD-A nrPDB Length = 186 Score = 127 bits (320), Expect = 3e-30, Method: Compositional matrix adjust. Identities = 69/181 (38%), Positives = 109/181 (60%), Gaps = 11/181 (6%) Query: 6 YDYLIKLLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYNAQGPNGSSGKA 65 YD+L K L +G++G GK+ L+++ + KF T+G++F K + N G Sbjct: 7 YDFLFKFLVIGNAGTGKSCLLHQFIEKKFKDDSNHTIGVEFGSK--IINVGGK------- 57 Query: 66 FKVHLQLWDTAGQERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVRNWMSQLQANAYCEN 125 V LQ+WDTAGQERFRS+T +++R A G LL++D+TS++++ + NW++ + A +N Sbjct: 58 -YVKLQIWDTAGQERFRSVTRSYYRGAAGALLVYDITSRETYNALTNWLTDARMLA-SQN 115 Query: 126 PDIVLIGNKADLPDQREVNERQARELADKYGIPYFETSAATGQNVEKAVETLLDLIMKRM 185 I+L GNK DL REV +A A + + + ETSA TG+NVE+A I+ ++ Sbjct: 116 IVIILCGNKKDLDADREVTFLEASRFAQENELMFLETSALTGENVEEAFVQCARKILNKI 175 Query: 186 E 186 E Sbjct: 176 E 176 >2HUP-A nrPDB Length = 201 Score = 127 bits (319), Expect = 3e-30, Method: Compositional matrix adjust. Identities = 74/184 (40%), Positives = 113/184 (61%), Gaps = 13/184 (7%) Query: 3 DGDYDYLIKLLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYNAQGPNGSS 62 D YD+L KL+ +GD+ VGKT + R+ F+ + +T+G+DF K + QG Sbjct: 23 DEQYDFLFKLVLVGDASVGKTCVVQRFKTGAFSERQGSTIGVDFTMKTL--EIQGK---- 76 Query: 63 GKAFKVHLQLWDTAGQERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVRNWMSQLQANAY 122 +V LQ+WDTAGQERFR++T +++R A G +L +D+T + SFL+V +W+ ++ A Sbjct: 77 ----RVKLQIWDTAGQERFRTITQSYYRSANGAILAYDITKRSSFLSVPHWIEDVRKYA- 131 Query: 123 CENPDIVLIGNKADLPDQREVNERQARELADKYGIP-YFETSAATGQNVEKA-VETLLDL 180 N +LIGNK+DL + REV+ +A+ LA+ Y I ETSA NVE+A + +L Sbjct: 132 GSNIVQLLIGNKSDLSELREVSLAEAQSLAEHYDILCAIETSAKDSSNVEEAFLRVATEL 191 Query: 181 IMKR 184 IM+ Sbjct: 192 IMRH 195 >2IL1-A nrPDB Length = 192 Score = 125 bits (314), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 64/180 (35%), Positives = 110/180 (61%), Gaps = 12/180 (6%) Query: 7 DYLIKLLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYNAQGPNGSSGKAF 66 D+ ++++ +G GVGKT+ + R+TD+ F +TVG+DF+ K V + Sbjct: 24 DFKLQVIIIGSRGVGKTSLMERFTDDTFCEACKSTVGVDFKIKTVELRGK---------- 73 Query: 67 KVHLQLWDTAGQERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVRNWMSQLQANAYCENP 126 K+ LQ+WDTAGQERF S+T+A++R A G +L++D+T +++F ++ WM + A E+ Sbjct: 74 KIRLQIWDTAGQERFNSITSAYYRSAKGIILVYDITKKETFDDLPKWMKMIDKYA-SEDA 132 Query: 127 DIVLIGNKADLPDQREVNERQARELADKY-GIPYFETSAATGQNVEKAVETLLDLIMKRM 185 +++L+GNK D RE+ +Q + A + G+ + E SA NV++ L+D I+K+M Sbjct: 133 ELLLVGNKLDCETDREITRQQGEKFAQQITGMRFCEASAKDNFNVDEIFLKLVDDILKKM 192 >5UB8-A nrPDB Length = 222 Score = 125 bits (313), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 65/192 (33%), Positives = 117/192 (60%), Gaps = 15/192 (7%) Query: 5 DYDYLIKLLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYNAQGPNGSSGK 64 DY+YL K++ +GDSGVGK+ L R+T ++FN + +T+G++F + + + + Sbjct: 11 DYEYLYKIVLIGDSGVGKSNLLSRFTRDEFNLESRSTIGVEFATRTLEIDGK-------- 62 Query: 65 AFKVHLQLWDTAGQERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVRNWMSQLQANAYCE 124 +V Q+WDTAGQER+R++T+A++R A+G L+++D+ +S+ +V W+ +L+ +A Sbjct: 63 --RVKAQIWDTAGQERYRAITSAYYRGAVGALIVYDIAKTESYESVSRWLKELKEHADA- 119 Query: 125 NPDIVLIGNKADLPDQREVNERQARELADKYGIPYFETSAATGQNVEKAVETLLDLIMKR 184 N I L+GNK+DL R V +A+ A + + + E SA + NV+ + LL K Sbjct: 120 NIIIELVGNKSDLDHLRAVPTEEAKNFAMENNLLFTEASALSSDNVDLSFHQLL----KN 175 Query: 185 MEQCVEKTQIPD 196 + + + K Q+ + Sbjct: 176 IYEMISKHQLEN 187 >4PHF-A nrPDB Length = 184 Score = 124 bits (312), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 66/174 (37%), Positives = 107/174 (61%), Gaps = 14/174 (8%) Query: 9 LIKLLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYNAQGPNGSSGKAFKV 68 ++K++ LGDSGVGKT+ ++RY ++K++ ++ T+G DF K V + Sbjct: 10 ILKVIILGDSGVGKTSLMHRYVNDKYSCQYKATIGADFLTKEVTVDGDKV---------A 60 Query: 69 HLQLWDTAGQERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVRNWMSQLQANAYCENPD- 127 +Q+WDTAGQERF+SL AF+R A +L++D+T+ SF N+++W + +A +P+ Sbjct: 61 TMQVWDTAGQERFQSLGVAFYRGADCCVLVYDVTNASSFENIKSWRDEFLVHANVNSPET 120 Query: 128 --IVLIGNKADLPDQRE-VNERQARELADKYG-IPYFETSAATGQNVEKAVETL 177 V++GNK D + ++ V+E+ A+ELA G IP F TSA NV+ A E + Sbjct: 121 FPFVILGNKIDAEESKKIVSEKSAQELAKSLGDIPLFLTSAKNAINVDTAFEEI 174 >2O52-A nrPDB Length = 200 Score = 124 bits (310), Expect = 4e-29, Method: Compositional matrix adjust. Identities = 68/183 (37%), Positives = 111/183 (60%), Gaps = 15/183 (8%) Query: 7 DYLIKLLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYNAQGPNGSSGKAF 66 D+L K L +G +G GK+ L+++ +NKF T+G++F + V N G Sbjct: 23 DFLFKFLVIGSAGTGKSCLLHQFIENKFKQDSNHTIGVEFGSR--VVNVGGKT------- 73 Query: 67 KVHLQLWDTAGQERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVRNWMSQLQANAYCENP 126 V LQ+WDTAGQERFRS+T +++R A G LL++D+TS++++ ++ W++ + A +P Sbjct: 74 -VKLQIWDTAGQERFRSVTRSYYRGAAGALLVYDITSRETYNSLAAWLTDARTLA---SP 129 Query: 127 DIVLI--GNKADLPDQREVNERQARELADKYGIPYFETSAATGQNVEKAVETLLDLIMKR 184 +IV+I GNK DL +REV +A A + + + ETSA TG+NVE+A I+ + Sbjct: 130 NIVVILCGNKKDLDPEREVTFLEASRFAQENELMFLETSALTGENVEEAFLKCARTILNK 189 Query: 185 MEQ 187 ++ Sbjct: 190 IDS 192 >1YZU-A nrPDB Length = 170 Score = 123 bits (308), Expect = 6e-29, Method: Compositional matrix adjust. Identities = 68/186 (36%), Positives = 107/186 (57%), Gaps = 20/186 (10%) Query: 4 GDYDYLIKLLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYNAQGPNGSSG 63 G Y K++ LG+ VGKT+ + RY +NKFN K ITT+ F K++ N G Sbjct: 1 GSRAYSFKVVLLGEGCVGKTSLVLRYCENKFNDKHITTLQASFLTKKL--NIGGK----- 53 Query: 64 KAFKVHLQLWDTAGQERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVRNWMSQLQ---AN 120 +V+L +WDTAGQERF +L ++RD+ G +L++D+T + SF V+NW+ +L+ N Sbjct: 54 ---RVNLAIWDTAGQERFHALGPIYYRDSNGAILVYDITDEDSFQKVKNWVKELRKMLGN 110 Query: 121 AYCENPDIVLIGNKADLPDQREVNERQARELADKYGIPYFETSAATGQNVEKAVETLLDL 180 C + ++GNK DL +R V+ ++A A+ G ++ TSA + +E E LDL Sbjct: 111 EIC----LCIVGNKIDLEKERHVSIQEAESYAESVGAKHYHTSAKQNKGIE---ELFLDL 163 Query: 181 IMKRME 186 + +E Sbjct: 164 CKRMIE 169 >1D5C-A nrPDB Length = 162 Score = 119 bits (298), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 63/161 (39%), Positives = 97/161 (60%), Gaps = 11/161 (6%) Query: 11 KLLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYNAQGPNGSSGKAFKVHL 70 KL+ LG+ VGKT+ + R+ + F+ + +T+GIDF K +Y +GP V L Sbjct: 3 KLVFLGEQAVGKTSIITRFMYDTFDNNYQSTIGIDFLSK-TLYLDEGP---------VRL 52 Query: 71 QLWDTAGQERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVRNWMSQLQANAYCENPDIVL 130 QLWDTAGQERFRSL ++ RD+ ++++D+T++QSF N W+ + N ++ I L Sbjct: 53 QLWDTAGQERFRSLIPSYIRDSAAAIVVYDITNRQSFENTTKWIQDI-LNERGKDVIIAL 111 Query: 131 IGNKADLPDQREVNERQARELADKYGIPYFETSAATGQNVE 171 +GNK DL D R+V + + A +Y + ETSA G N++ Sbjct: 112 VGNKTDLGDLRKVTYEEGMQKAQEYNTMFHETSAKAGHNIK 152 >1EK0-A nrPDB Length = 170 Score = 116 bits (291), Expect = 7e-27, Method: Compositional matrix adjust. Identities = 61/164 (37%), Positives = 96/164 (58%), Gaps = 14/164 (8%) Query: 10 IKLLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYNAQGPNGSSGKAFKVH 69 IKL+ LG++ VGK++ + R+ N F T+G F +RV N V Sbjct: 4 IKLVLLGEAAVGKSSIVLRFVSNDFAENKEPTIGAAFLTQRVTINEH----------TVK 53 Query: 70 LQLWDTAGQERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVRNWMSQLQANAYCENPDIV 129 ++WDTAGQERF SL ++R+A L+++D+T QSF+ R+W+ +L A ++ I Sbjct: 54 FEIWDTAGQERFASLAPMYYRNAQAALVVYDVTKPQSFIKARHWVKELHEQA-SKDIIIA 112 Query: 130 LIGNKADLPD---QREVNERQARELADKYGIPYFETSAATGQNV 170 L+GNK D+ +R+V + +LA++ G+ +FETSA TG+NV Sbjct: 113 LVGNKIDMLQEGGERKVAREEGEKLAEEKGLLFFETSAKTGENV 156 >5LDD-C nrPDB Length = 207 Score = 116 bits (290), Expect = 9e-27, Method: Compositional matrix adjust. Identities = 65/174 (37%), Positives = 106/174 (60%), Gaps = 15/174 (8%) Query: 9 LIKLLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYNAQGPNGSSGKAFKV 68 L+K++ LGDSGVGKT+ + +Y + KF+ + T+G DF + V+ + + +V Sbjct: 10 LLKVIILGDSGVGKTSLMNQYVNKKFSASYKATIGADFLTREVMVDDR----------QV 59 Query: 69 HLQLWDTAGQERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVRNWMSQLQANAYCENPD- 127 +QLWDTAGQERF+SL AF+R A +L+FD+ + +SF + +W + A +P+ Sbjct: 60 TMQLWDTAGQERFQSLGVAFYRGADCCVLVFDVNNAKSFDALDSWRDEFLIQASPRDPEN 119 Query: 128 --IVLIGNKADLPD-QREVNERQARELA-DKYGIPYFETSAATGQNVEKAVETL 177 V++G K D+ + +R ++ ++A+ K GIPYFETSA NVE+A + + Sbjct: 120 FPFVVLGIKIDVEESKRVISTKRAQTFCQSKGGIPYFETSAKEAINVEEAFQVI 173 >4QXA-A nrPDB Length = 208 Score = 115 bits (287), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 69/194 (35%), Positives = 100/194 (51%), Gaps = 14/194 (7%) Query: 9 LIKLLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYNAQGPNGSSGKAFKV 68 L K++ LGD GVGK++ + RY NKF+ + T+G++F K + + V Sbjct: 8 LFKIILLGDGGVGKSSLMNRYVTNKFDSQLFHTIGVEFLNKDLEVDGHF----------V 57 Query: 69 HLQLWDTAGQERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVRNWMSQLQANAYCENPD- 127 +Q+WDTAG ERFRSL T F+R + LL F + QSF N+ NW + A + P+ Sbjct: 58 TMQIWDTAGLERFRSLRTPFYRGSDCCLLTFSVDDSQSFQNLSNWKKEFIYYADVKEPES 117 Query: 128 --IVLIGNKADLPDQREVNERQARELADKYGIPYFETSAATGQNVEKAVETLLDLIMKRM 185 V++GNK D+ +++ E D PYFETSA NV A E + I+ Sbjct: 118 FPFVILGNKTDIKERQVSTEEAQAWCKDNGDYPYFETSAKDSTNVAAAFEEAVRRILATE 177 Query: 186 EQCVEKTQIPDTVN 199 ++ Q DTVN Sbjct: 178 DRSEHLIQT-DTVN 190 >1WMS-A nrPDB Length = 177 Score = 114 bits (285), Expect = 4e-26, Method: Compositional matrix adjust. Identities = 64/177 (36%), Positives = 94/177 (53%), Gaps = 13/177 (7%) Query: 9 LIKLLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYNAQGPNGSSGKAFKV 68 L K++ LGD GVGK++ + RY NKF+ + T+G++F K + + V Sbjct: 7 LFKVILLGDGGVGKSSLMNRYVTNKFDTQLFHTIGVEFLNKDLEVDGHF----------V 56 Query: 69 HLQLWDTAGQERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVRNWMSQLQANAYCENPD- 127 +Q+WDTAGQERFRSL T F+R + LL F + QSF N+ NW + A + P+ Sbjct: 57 TMQIWDTAGQERFRSLRTPFYRGSDCCLLTFSVDDSQSFQNLSNWKKEFIYYADVKEPES 116 Query: 128 --IVLIGNKADLPDQREVNERQARELADKYGIPYFETSAATGQNVEKAVETLLDLIM 182 V++GNK D+ +++ E D PYFETSA NV A E + ++ Sbjct: 117 FPFVILGNKIDISERQVSTEEAQAWCRDNGDYPYFETSAKDATNVAAAFEEAVRRVL 173 >4FMC-F nrPDB Length = 117 Score = 113 bits (283), Expect = 6e-26, Method: Compositional matrix adjust. Identities = 53/127 (41%), Positives = 86/127 (67%), Gaps = 11/127 (8%) Query: 12 LLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYNAQGPNGSSGKAFKVHLQ 71 LL +GDSGVGK+ L R+ D+ + +I+T+G+DF+ + + + GK K LQ Sbjct: 1 LLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELD--------GKTIK--LQ 50 Query: 72 LWDTAGQERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVRNWMSQLQANAYCENPDIVLI 131 +WDTAGQERFR++T++++R A G ++++D+T Q+SF NV+ W+ ++ A EN + +L+ Sbjct: 51 IWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYA-SENVNKLLV 109 Query: 132 GNKADLP 138 GNK DL Sbjct: 110 GNKCDLT 116 >6IYB-A nrPDB Length = 199 Score = 113 bits (282), Expect = 8e-26, Method: Compositional matrix adjust. Identities = 66/193 (34%), Positives = 109/193 (56%), Gaps = 14/193 (7%) Query: 9 LIKLLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYNAQGPNGSSGKAFKV 68 L+K++ LGDSGVGKT+ + +Y + KF+ ++ T+G DF K V+ + + V Sbjct: 13 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDR----------LV 62 Query: 69 HLQLWDTAGQERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVRNWMSQLQANAYCENPD- 127 +Q+WDTAG ERF+S AF+R A +L+FD+T+ +F + +W + A +P+ Sbjct: 63 TMQIWDTAGLERFQS-GVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPEN 121 Query: 128 --IVLIGNKADLPDQREVNERQARELADKYGIPYFETSAATGQNVEKAVETLLDLIMKRM 185 V++GNK DL +++ +R K IPYFETSA NVE+A +T+ +K+ Sbjct: 122 FPFVVLGNKIDLENRQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIARNALKQE 181 Query: 186 EQCVEKTQIPDTV 198 + + P+ + Sbjct: 182 TEVELYNEFPEPI 194 >1YVD-A nrPDB Length = 169 Score = 112 bits (281), Expect = 8e-26, Method: Compositional matrix adjust. Identities = 58/164 (35%), Positives = 96/164 (58%), Gaps = 17/164 (10%) Query: 10 IKLLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYNAQGPNGSSGKAFKVH 69 +K+ LGD+GVGK++ ++R+ ++ F+P T+G F K V Y + +H Sbjct: 6 LKVCLLGDTGVGKSSIVWRFVEDSFDPNINPTIGASFMTKTVQYQNE-----------LH 54 Query: 70 -LQLWDTAGQERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVRNWMSQLQANAYCENPDI 128 +WDTAGQERFR+L ++R + ++++D+T +++F ++NW+ +L+ + P I Sbjct: 55 KFLIWDTAGQERFRALAPMYYRGSAAAIIVYDITKEETFSTLKNWVRELRQHG---PPSI 111 Query: 129 V--LIGNKADLPDQREVNERQARELADKYGIPYFETSAATGQNV 170 V + GNK DL D REV ER A++ AD + ETSA N+ Sbjct: 112 VVAIAGNKCDLTDVREVMERDAKDYADSIHAIFVETSAKNAINI 155 >2OCB-A nrPDB Length = 180 Score = 110 bits (276), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 65/182 (35%), Positives = 98/182 (53%), Gaps = 13/182 (7%) Query: 9 LIKLLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYNAQGPNGSSGKAFKV 68 L+K++ LGD GVGK++ + RY NKF+ + T+G++F + + + + V Sbjct: 7 LLKVILLGDGGVGKSSLMNRYVTNKFDSQAFHTIGVEFLNRDLEVDGRF----------V 56 Query: 69 HLQLWDTAGQERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVRNWMSQLQANAYCENPD- 127 LQ+WDTAGQERF+SL T F+R A LL F + +QSF N+ NW + A ++P+ Sbjct: 57 TLQIWDTAGQERFKSLRTPFYRGADCCLLTFSVDDRQSFENLGNWQKEFIYYADVKDPEH 116 Query: 128 --IVLIGNKADLPDQREVNERQARELADKYGIPYFETSAATGQNVEKAVETLLDLIMKRM 185 V++GNK D D++ E + PY ETSA NV A E + ++ Sbjct: 117 FPFVVLGNKVDKEDRQVTTEEAQTWCMENGDYPYLETSAKDDTNVTVAFEEAVRQVLAVE 176 Query: 186 EQ 187 EQ Sbjct: 177 EQ 178 >1Z06-A nrPDB Length = 189 Score = 110 bits (275), Expect = 5e-25, Method: Compositional matrix adjust. Identities = 54/162 (33%), Positives = 92/162 (56%), Gaps = 11/162 (6%) Query: 4 GDYDYLIKLLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYNAQGPNGSSG 63 G + K++ +GDS VGKT YR+ +F + T+G+DFRE+ V + + Sbjct: 15 GSRSRIFKIIVIGDSNVGKTCLTYRFCAGRFPDRTEATIGVDFRERAVDIDGE------- 67 Query: 64 KAFKVHLQLWDTAGQERFR-SLTTAFFRDAMGFLLMFDLTSQQSFLNVRNWMSQLQANAY 122 ++ +QLWDTAGQERFR S+ ++R+ + ++D+T+ SF ++ W+ + + + Sbjct: 68 ---RIKIQLWDTAGQERFRKSMVQHYYRNVHAVVFVYDMTNMASFHSLPAWIEECKQHLL 124 Query: 123 CENPDIVLIGNKADLPDQREVNERQARELADKYGIPYFETSA 164 + +L+GNK DL +V A++ AD + +P FETSA Sbjct: 125 ANDIPRILVGNKCDLRSAIQVPTDLAQKFADTHSMPLFETSA 166 >2G77-B nrPDB Length = 198 Score = 110 bits (274), Expect = 6e-25, Method: Compositional matrix adjust. Identities = 53/157 (33%), Positives = 91/157 (57%), Gaps = 11/157 (7%) Query: 9 LIKLLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYNAQGPNGSSGKAFKV 68 + K++ +GDS VGKT YR+ +F + T+G+DFRE+ V + + ++ Sbjct: 29 IFKIIVIGDSNVGKTCLTYRFCAGRFPDRTEATIGVDFRERAVDIDGE----------RI 78 Query: 69 HLQLWDTAGQERFR-SLTTAFFRDAMGFLLMFDLTSQQSFLNVRNWMSQLQANAYCENPD 127 +QLWDTAGQERFR S+ ++R+ + ++D+T+ SF ++ W+ + + + + Sbjct: 79 KIQLWDTAGQERFRKSMVQHYYRNVHAVVFVYDMTNMASFHSLPAWIEECKQHLLANDIP 138 Query: 128 IVLIGNKADLPDQREVNERQARELADKYGIPYFETSA 164 +L+GNK DL +V A++ AD + +P FETSA Sbjct: 139 RILVGNKCDLRSAIQVPTDLAQKFADTHSMPLFETSA 175 >2FG5-A nrPDB Length = 192 Score = 108 bits (270), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 58/163 (35%), Positives = 91/163 (55%), Gaps = 11/163 (6%) Query: 10 IKLLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYNAQGPNGSSGKAFKVH 69 +K+ LGD+GVGK++ + R+ + F+ T+G F K V P G+ F + Sbjct: 24 LKVCLLGDTGVGKSSIVCRFVQDHFDHNISPTIGASFMTKTV------PCGNELHKFLI- 76 Query: 70 LQLWDTAGQERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVRNWMSQLQANAYCENPDIV 129 WDTAGQERF SL ++R + ++++D+T Q SF ++ W+ +L+ + EN + Sbjct: 77 ---WDTAGQERFHSLAPMYYRGSAAAVIVYDITKQDSFYTLKKWVKELKEHGP-ENIVMA 132 Query: 130 LIGNKADLPDQREVNERQARELADKYGIPYFETSAATGQNVEK 172 + GNK DL D REV + A+E A+ G ETSA N+E+ Sbjct: 133 IAGNKCDLSDIREVPLKDAKEYAESIGAIVVETSAKNAINIEE 175 >2FFQ-A nrPDB Length = 171 Score = 108 bits (269), Expect = 3e-24, Method: Compositional matrix adjust. Identities = 57/162 (35%), Positives = 93/162 (57%), Gaps = 11/162 (6%) Query: 11 KLLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYNAQGPNGSSGKAFKVHL 70 KL+ LG+ VGKT+ + R+ + F+ + T+GIDF K + + V L Sbjct: 4 KLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDR----------TVRL 53 Query: 71 QLWDTAGQERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVRNWMSQLQANAYCENPDIVL 130 QLWDTAGQERFRSL ++ RD+ ++++D+T+ SF W+ ++ + I+L Sbjct: 54 QLWDTAGQERFRSLIPSYIRDSTVAVVVYDITNLNSFQQTSKWIDDVRTER-GSDVIIML 112 Query: 131 IGNKADLPDQREVNERQARELADKYGIPYFETSAATGQNVEK 172 +GNK DL D+R++ + + A + + + ETSA TG NV++ Sbjct: 113 VGNKTDLADKRQITIEEGEQRAKELSVMFIETSAKTGYNVKQ 154 >1TU4-A nrPDB Length = 171 Score = 107 bits (266), Expect = 6e-24, Method: Compositional matrix adjust. Identities = 58/162 (35%), Positives = 96/162 (59%), Gaps = 15/162 (9%) Query: 11 KLLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYNAQGPNGSSGKAFKVHL 70 KL+ LG+S VGK++ + R+ +F+ +T+G F + V + V Sbjct: 9 KLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDDT----------TVKF 58 Query: 71 QLWDTAGQERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVRNWMSQLQANAYCENPDIV- 129 ++WDTAGQER+ SL ++R A ++++D+T+++SF +NW+ +LQ A +P+IV Sbjct: 59 EIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNEESFARAKNWVKELQRQA---SPNIVI 115 Query: 130 -LIGNKADLPDQREVNERQARELADKYGIPYFETSAATGQNV 170 L GNKADL ++R V+ ++A+ AD + + ETSA T NV Sbjct: 116 ALSGNKADLANKRAVDFQEAQSYADDNSLLFMETSAKTSMNV 157 >2GIL-A nrPDB Length = 162 Score = 105 bits (263), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 61/166 (36%), Positives = 96/166 (57%), Gaps = 19/166 (11%) Query: 11 KLLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYNAQGPNGSSGKAFKVHL 70 KL+ LG+ VGKT+ + R+ + F+ + T+GIDF K + + V L Sbjct: 3 KLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDR----------TVRL 52 Query: 71 QLWDTAGQERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVRNWMSQLQANAYCENPDIVL 130 QLWDTAGQERFRSL ++ RD+ ++++D+T+ SF W+ ++ + I+L Sbjct: 53 QLWDTAGQERFRSLIPSYIRDSTVAVVVYDITNVNSFQQTTKWIDDVRTER-GSDVIIML 111 Query: 131 IGNKADLPDQREVN----ERQARELADKYGIPYFETSAATGQNVEK 172 +GNK DL D+R+V+ ER+A+EL + + ETSA G NV++ Sbjct: 112 VGNKTDLADKRQVSIEEGERKAKEL----NVMFIETSAKAGYNVKQ 153 >5YOZ-A nrPDB Length = 177 Score = 105 bits (263), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 67/176 (38%), Positives = 101/176 (57%), Gaps = 19/176 (10%) Query: 11 KLLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYNAQGPNGSSGKAFKVHL 70 K++ LG+SG GK++ R+T N+F TT+G F K V+ + G+A K Sbjct: 17 KIVMLGESGAGKSSIALRFTRNEFLANQETTIGAAFLSKTVMID--------GRALKY-- 66 Query: 71 QLWDTAGQERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVRNWMSQLQANAYCENPD--I 128 ++WDTAG ERFRSL ++R A G L+++D+T+ +S + W+ +L+ANA +P I Sbjct: 67 EIWDTAGLERFRSLAPIYYRGASGALVVYDITNSESLKKAQTWIKELRANA---DPSLII 123 Query: 129 VLIGNKADLPDQREVN-ERQARELADKYGIPYFETSAATGQNVEKAVETLLDLIMK 183 VL+GNK DL R+V+ E R A++ ++E SA NVE + LDL K Sbjct: 124 VLVGNKKDLGSLRQVSFEDGQRLAAEEQLAAFYEASAKDNNNVE---QVFLDLAAK 176 >4G01-B nrPDB Length = 181 Score = 105 bits (262), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 59/164 (35%), Positives = 93/164 (56%), Gaps = 15/164 (9%) Query: 11 KLLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYNAQGPNGSSGKAFKVHL 70 KL+ LGD G GK++ + R+ ++F +T+G F + + N V Sbjct: 14 KLVLLGDVGAGKSSLVLRFVKDQFVEFQESTIGAAFFSQTLAVNDA----------TVKF 63 Query: 71 QLWDTAGQERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVRNWMSQLQANAYCENPDIV- 129 ++WDTAGQER+ SL ++R A +++FD+T+Q SF + W+ +LQA NP++V Sbjct: 64 EIWDTAGQERYHSLAPMYYRGAAAAIIVFDVTNQASFERAKKWVQELQAQG---NPNMVM 120 Query: 130 -LIGNKADLPDQREVNERQARELADKYGIPYFETSAATGQNVEK 172 L GNK+DL D R+V A+ A + G+ + ETSA T NV++ Sbjct: 121 ALAGNKSDLLDARKVTAEDAQTYAQENGLFFMETSAKTATNVKE 164 >2HEI-A nrPDB Length = 179 Score = 105 bits (262), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 57/162 (35%), Positives = 92/162 (56%), Gaps = 15/162 (9%) Query: 11 KLLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYNAQGPNGSSGKAFKVHL 70 KL+ LG+S VGK++ + R+ +F+ +T+G F + V + V Sbjct: 10 KLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQSVCLDDT----------TVKF 59 Query: 71 QLWDTAGQERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVRNWMSQLQANAYCENPDIV- 129 ++WDTAGQER+ SL ++R A ++++D+T+Q++F + W+ +LQ A +P IV Sbjct: 60 EIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNQETFARAKTWVKELQRQA---SPSIVI 116 Query: 130 -LIGNKADLPDQREVNERQARELADKYGIPYFETSAATGQNV 170 L GNKADL ++R V +A+ AD + + ETSA T NV Sbjct: 117 ALAGNKADLANKRMVEYEEAQAYADDNSLLFMETSAKTAMNV 158 >4CZ2-A nrPDB Length = 230 Score = 103 bits (257), Expect = 6e-23, Method: Compositional matrix adjust. Identities = 62/207 (29%), Positives = 106/207 (51%), Gaps = 19/207 (9%) Query: 7 DYLIKLLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYNAQGPNGSSGKAF 66 ++L K+L +G+ GVGKT+ + RY F+ + T+G+DF K + ++++ Sbjct: 28 EHLFKVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVLNWDSRTL-------- 79 Query: 67 KVHLQLWDTAGQERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVRNWMSQLQANAYCENP 126 V LQLWD AG ERF ++T ++++AMG ++FD++ +F V W S L + + N Sbjct: 80 -VRLQLWDIAGLERFGNMTRVYYKEAMGAFVVFDISRSSTFEAVLKWKSDLDSKVHLPNG 138 Query: 127 D---IVLIGNKADLPDQREVNERQARELADKYGIP-YFETSAATGQNVEKAVETLLDLIM 182 VL+ NK D ++ Q + ++G +FETSA N+E+A L++ ++ Sbjct: 139 SPIPAVLLANKCDQNKDSSMSPSQMDQFCKEHGFAGWFETSAKDNINIEEAARFLVEKML 198 Query: 183 KRMEQCVEKTQIPDTVNGGNSGNLDGE 209 V P+ N + LD E Sbjct: 199 ------VNHQSFPNEENDVDKIKLDQE 219 >5LEF-A nrPDB Length = 191 Score = 103 bits (256), Expect = 7e-23, Method: Compositional matrix adjust. Identities = 60/166 (36%), Positives = 95/166 (57%), Gaps = 19/166 (11%) Query: 11 KLLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYNAQGPNGSSGKAFKVHL 70 KL+ LG+ VGKT+ + R+ + F+ + T+GIDF K + + V L Sbjct: 11 KLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDR----------TVRL 60 Query: 71 QLWDTAGQERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVRNWMSQLQANAYCENPDIVL 130 QLWDTAG ERFRSL ++ RD+ ++++D+T+ SF W+ ++ + I+L Sbjct: 61 QLWDTAGLERFRSLIPSYIRDSTVAVVVYDITNVNSFQQTTKWIDDVRTER-GSDVIIML 119 Query: 131 IGNKADLPDQREVN----ERQARELADKYGIPYFETSAATGQNVEK 172 +GNK DL D+R+V+ ER+A+EL + + ETSA G NV++ Sbjct: 120 VGNKTDLADKRQVSIEEGERKAKEL----NVMFIETSAKAGYNVKQ 161 >4KYI-B nrPDB Length = 170 Score = 101 bits (251), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 56/162 (34%), Positives = 91/162 (56%), Gaps = 15/162 (9%) Query: 11 KLLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYNAQGPNGSSGKAFKVHL 70 KL+ LG+S VGK++ + R+ +F+ +T+G F + V + V Sbjct: 11 KLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDT----------TVKF 60 Query: 71 QLWDTAGQERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVRNWMSQLQANAYCENPDIV- 129 ++WDTAG ER+ SL ++R A ++++D+T+ +F +NW+ +LQ A +P+IV Sbjct: 61 EIWDTAGLERYHSLAPMYYRGAQAAIVVYDITNTDTFARAKNWVKELQRQA---SPNIVI 117 Query: 130 -LIGNKADLPDQREVNERQARELADKYGIPYFETSAATGQNV 170 L GNKADL +R V ++A+ AD + + ETSA T NV Sbjct: 118 ALAGNKADLASKRAVEFQEAQAYADDNSLLFMETSAKTAMNV 159 >6FF8-A nrPDB Length = 181 Score = 100 bits (249), Expect = 5e-22, Method: Compositional matrix adjust. Identities = 56/180 (31%), Positives = 97/180 (53%), Gaps = 13/180 (7%) Query: 7 DYLIKLLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYNAQGPNGSSGKAF 66 ++L K+L +G+ GVGKT+ + RY F+ + T+G+DF K + ++++ Sbjct: 6 EHLFKVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVLNWDSRTL-------- 57 Query: 67 KVHLQLWDTAGQERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVRNWMSQLQANAYCENP 126 V LQLWD AG ERF ++T ++++A+G ++FD++ +F V W S L + + N Sbjct: 58 -VRLQLWDIAGLERFGNMTRVYYKEAVGAFVVFDISRSSTFEAVLKWKSDLDSKVHLPNG 116 Query: 127 D---IVLIGNKADLPDQREVNERQARELADKYGIP-YFETSAATGQNVEKAVETLLDLIM 182 VL+ NK D + Q + ++G +FETSA N+E+A L++ I+ Sbjct: 117 SPIPAVLLANKCDQNKDSSQSPSQVDQFCKEHGFAGWFETSAKDNINIEEAARFLVEKIL 176 >2N1B-A nrPDB Length = 261 Score = 98.2 bits (243), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 59/169 (34%), Positives = 90/169 (53%), Gaps = 14/169 (8%) Query: 4 GDYDYLIKLLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYNAQGPNGSSG 63 G+ KL+ +GD G GKTTF+ R+ +F K++ T+G++ V + +GP Sbjct: 46 GEPQVQFKLVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEV-HPLVFHTNRGP----- 99 Query: 64 KAFKVHLQLWDTAGQERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVRNWMSQLQANAYC 123 + +WDTAGQE+F L ++ A ++MFD+TS+ ++ NV NW L C Sbjct: 100 ----IKFNVWDTAGQEKFGGLRDGYYIQAQCAIIMFDVTSRVTYKNVPNWHRDLV--RVC 153 Query: 124 ENPDIVLIGNKADLPDQREVNERQARELADKYGIPYFETSAATGQNVEK 172 EN IVL GNK D+ D R+V + K + Y++ SA + N EK Sbjct: 154 ENIPIVLCGNKVDIKD-RKVKAKSI-VFHRKKNLQYYDISAKSNYNFEK 200 >5UWI-A nrPDB Length = 237 Score = 98.2 bits (243), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 57/169 (33%), Positives = 91/169 (53%), Gaps = 14/169 (8%) Query: 4 GDYDYLIKLLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYNAQGPNGSSG 63 G+ KL+ +GD G GKTTF+ R+ +F K++ T+G++ V + +GP Sbjct: 26 GEPQVQFKLVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEV-HPLVFHTNRGP----- 79 Query: 64 KAFKVHLQLWDTAGQERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVRNWMSQLQANAYC 123 + +WDTAGQE+F L ++ A ++MFD+TS+ ++ NV NW L C Sbjct: 80 ----IKFNVWDTAGQEKFGGLRDGYYIQAQCAIIMFDVTSRVTYKNVPNWHRDLV--RVC 133 Query: 124 ENPDIVLIGNKADLPDQREVNERQARELADKYGIPYFETSAATGQNVEK 172 EN IVL GNK D+ D++ + ++ K + Y++ SA + N EK Sbjct: 134 ENIPIVLCGNKVDIKDRKV--KAKSIVFHRKKNLQYYDISAKSNYNFEK 180 >5CLL-A nrPDB Length = 191 Score = 98.2 bits (243), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 57/169 (33%), Positives = 91/169 (53%), Gaps = 14/169 (8%) Query: 4 GDYDYLIKLLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYNAQGPNGSSG 63 G+ KL+ +GD G GKTTF+ R+ +F K++ T+G++ V + +GP Sbjct: 5 GEPQVQFKLVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHP-LVFHTNRGP----- 58 Query: 64 KAFKVHLQLWDTAGQERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVRNWMSQLQANAYC 123 + +WDTAGQE+F L ++ A ++MFD+TS+ ++ NV NW L C Sbjct: 59 ----IKFNVWDTAGQEKFGGLRDGYYIQAQCAIIMFDVTSRVTYKNVPNWHRDLV--RVC 112 Query: 124 ENPDIVLIGNKADLPDQREVNERQARELADKYGIPYFETSAATGQNVEK 172 EN IVL GNK D+ D++ + ++ K + Y++ SA + N EK Sbjct: 113 ENIPIVLCGNKVDIKDRKV--KAKSIVFHRKKNLQYYDISAKSNYNFEK 159 >1Z22-A nrPDB Length = 168 Score = 94.4 bits (233), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 54/170 (31%), Positives = 89/170 (52%), Gaps = 16/170 (9%) Query: 10 IKLLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYNAQGPNGSSGKAFKVH 69 IK++ +G+ VGK++ + RY F + T+G+DF E+++ N + V Sbjct: 6 IKMVVVGNGAVGKSSMIQRYCKGIFTKDYKKTIGVDFLERQIQVNDED----------VR 55 Query: 70 LQLWDTAGQERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVRNWMSQLQANAYCENPDI- 128 L LWDTAGQE F ++T A++R A +L+F T ++SF + +W ++ A E DI Sbjct: 56 LMLWDTAGQEEFDAITKAYYRGAQACVLVFSTTDRESFEAISSWREKVVA----EVGDIP 111 Query: 129 -VLIGNKADLPDQREVNERQARELADKYGIPYFETSAATGQNVEKAVETL 177 L+ NK DL D + +A LA + + ++ TS NV + + L Sbjct: 112 TALVQNKIDLLDDSCIKNEEAEGLAKRLKLRFYRTSVKEDLNVSEVFKYL 161 >2J0V-A nrPDB Length = 212 Score = 92.0 bits (227), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 65/185 (35%), Positives = 92/185 (49%), Gaps = 23/185 (12%) Query: 9 LIKLLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYNAQGPNGSSGKAFKV 68 IK + +GD VGKT L YT NKF +I TV +F V + Q V Sbjct: 9 FIKCVTVGDGAVGKTCMLICYTSNKFPTDYIPTVFDNF-SANVAVDGQ----------IV 57 Query: 69 HLQLWDTAGQERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNV-RNWMSQLQANAYCENPD 127 +L LWDTAGQE + L +R A F+L F L S+ S+ NV + WM +L+ + N Sbjct: 58 NLGLWDTAGQEDYSRLRPLSYRGADIFVLAFSLISKASYENVLKKWMPELR--RFAPNVP 115 Query: 128 IVLIGNKADLPDQR--------EVNERQARELADKYG-IPYFETSAATGQNVEKAVETLL 178 IVL+G K DL D + + Q EL + G Y E S+ T QNV+ +T + Sbjct: 116 IVLVGTKLDLRDDKGYLADHTNVITSTQGEELRKQIGAAAYIECSSKTQQNVKAVFDTAI 175 Query: 179 DLIMK 183 ++++ Sbjct: 176 KVVLQ 180 >5XOJ-A nrPDB Length = 182 Score = 91.7 bits (226), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 55/162 (33%), Positives = 85/162 (52%), Gaps = 14/162 (8%) Query: 11 KLLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYNAQGPNGSSGKAFKVHL 70 KL+ +GD G GKTTF+ R+ +F K+I T+G++ N ++ Sbjct: 14 KLVLVGDGGTGKTTFVKRHLTGEFEKKYIATIGVEVHPLSFYTNFG----------EIKF 63 Query: 71 QLWDTAGQERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVRNWMSQLQANAYCENPDIVL 130 +WDTAG E+F L ++ +A ++MFD+TS+ ++ NV NW L CEN IVL Sbjct: 64 DVWDTAGLEKFGGLRDGYYINAQCAIIMFDVTSRITYKNVPNWHRDLV--RVCENIPIVL 121 Query: 131 IGNKADLPDQREVNERQARELADKYGIPYFETSAATGQNVEK 172 GNK D+ +R+V + K + Y++ SA + N EK Sbjct: 122 CGNKVDV-KERKVKAKTI-TFHRKKNLQYYDISAKSNYNFEK 161 >3WYF-A nrPDB Length = 219 Score = 91.3 bits (225), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 55/162 (33%), Positives = 85/162 (52%), Gaps = 14/162 (8%) Query: 11 KLLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYNAQGPNGSSGKAFKVHL 70 KL+ +GD G GKTTF+ R+ +F K+I T+G++ N ++ Sbjct: 14 KLVLVGDGGTGKTTFVKRHLTGEFEKKYIATIGVEVHPLSFYTNFG----------EIKF 63 Query: 71 QLWDTAGQERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVRNWMSQLQANAYCENPDIVL 130 +WDTAG E+F L ++ +A ++MFD+TS+ ++ NV NW L CEN IVL Sbjct: 64 DVWDTAGLEKFGGLRDGYYINAQCAIIMFDVTSRITYKNVPNWHRDLV--RVCENIPIVL 121 Query: 131 IGNKADLPDQREVNERQARELADKYGIPYFETSAATGQNVEK 172 GNK D+ +R+V + K + Y++ SA + N EK Sbjct: 122 CGNKVDV-KERKVKAKTI-TFHRKKNLQYYDISAKSNYNFEK 161 >2WBL-C nrPDB Length = 180 Score = 90.9 bits (224), Expect = 4e-19, Method: Compositional matrix adjust. Identities = 64/187 (34%), Positives = 93/187 (49%), Gaps = 25/187 (13%) Query: 9 LIKLLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYNAQGPNGSSGKAFKV 68 IK + +GD VGKT L YT N F ++ TV +F VV +GS+ V Sbjct: 6 FIKCVTVGDGAVGKTCMLISYTGNTFPTDYVPTVFDNFSANVVV------DGST-----V 54 Query: 69 HLQLWDTAGQERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNV-RNWMSQLQANAYCENPD 127 +L LWDTAGQE + L +R A FLL F L S+ S+ N+ + W+ +L+ Y Sbjct: 55 NLGLWDTAGQEDYNRLRPLSYRGADVFLLAFSLISKASYENIHKKWLPELK--HYAPGIP 112 Query: 128 IVLIGNKADLPDQRE----------VNERQARELADKYG-IPYFETSAATGQNVEKAVET 176 IVL+G K DL D ++ + Q EL G + Y E S+ T QNV+ +T Sbjct: 113 IVLVGTKLDLRDDKQFLKDHPGAASITTAQGEELRKMIGAVRYLECSSKTQQNVKAVFDT 172 Query: 177 LLDLIMK 183 + + ++ Sbjct: 173 AIRVALR 179 >2NTY-C nrPDB Length = 180 Score = 90.5 bits (223), Expect = 5e-19, Method: Compositional matrix adjust. Identities = 62/187 (33%), Positives = 93/187 (49%), Gaps = 25/187 (13%) Query: 9 LIKLLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYNAQGPNGSSGKAFKV 68 IK + +GD VGKT L YT N F ++ TV +F VV +G++ V Sbjct: 6 FIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVV------DGNT-----V 54 Query: 69 HLQLWDTAGQERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNV-RNWMSQLQANAYCENPD 127 +L LWDTAGQE + L +R A F+L F L S+ S+ NV + W+ +L+ Y Sbjct: 55 NLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVAKKWIPELR--HYAPGVP 112 Query: 128 IVLIGNKADLPDQRE----------VNERQARELADKYGIP-YFETSAATGQNVEKAVET 176 I+L+G K DL D ++ + Q EL G P Y E S+ T QNV+ + Sbjct: 113 IILVGTKLDLRDDKQFFIDHPGAVPITTNQGEELKKLIGSPIYIECSSKTQQNVKAVFDA 172 Query: 177 LLDLIMK 183 + ++++ Sbjct: 173 AIKVVLQ 179 >3BWD-D nrPDB Length = 182 Score = 90.5 bits (223), Expect = 5e-19, Method: Compositional matrix adjust. Identities = 62/187 (33%), Positives = 93/187 (49%), Gaps = 25/187 (13%) Query: 9 LIKLLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYNAQGPNGSSGKAFKV 68 IK + +GD VGKT L YT N F ++ TV +F VV NG++ V Sbjct: 8 FIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVV------NGAT-----V 56 Query: 69 HLQLWDTAGQERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNV-RNWMSQLQANAYCENPD 127 +L LWDTAGQE + L +R A F+L F L S+ S+ NV + W+ +L+ Y Sbjct: 57 NLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELK--HYAPGVP 114 Query: 128 IVLIGNKADLPDQRE----------VNERQARELADKYGIP-YFETSAATGQNVEKAVET 176 IVL+G K DL D ++ + Q EL G P Y E S+ + +NV+ + Sbjct: 115 IVLVGTKLDLRDDKQFFIDHPGAVPITTVQGEELKKLIGAPAYIECSSKSQENVKGVFDA 174 Query: 177 LLDLIMK 183 + ++++ Sbjct: 175 AIRVVLQ 181 >5CM8-B nrPDB Length = 203 Score = 89.0 bits (219), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 54/176 (30%), Positives = 93/176 (52%), Gaps = 11/176 (6%) Query: 9 LIKLLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYNAQGPNGSSGKAFKV 68 L K++ +G GVGK+ ++ ++F + T +R K+VV + + +V Sbjct: 13 LHKVIMVGSGGVGKSALTLQFMYDEFVEDYEPTKADSYR-KKVVLDGE----------EV 61 Query: 69 HLQLWDTAGQERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVRNWMSQLQANAYCENPDI 128 + + DTAGQE + ++ +FR GFL +F +T +SF + + Q+ E+ Sbjct: 62 QIDILDTAGQEDYAAIRDNYFRSGEGFLCVFSITDDESFQATQEFREQILRVKNDESIPF 121 Query: 129 VLIGNKADLPDQREVNERQARELADKYGIPYFETSAATGQNVEKAVETLLDLIMKR 184 +L+GNK DL D+R+V + + A ++ +PY ETSA T +NV+K L+ I R Sbjct: 122 LLVGNKCDLNDKRKVPLSECQLRAQQWAVPYVETSAKTRENVDKVFFDLMREIRSR 177 >1ZC4-A nrPDB Length = 175 Score = 89.0 bits (219), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 54/176 (30%), Positives = 94/176 (53%), Gaps = 11/176 (6%) Query: 9 LIKLLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYNAQGPNGSSGKAFKV 68 L K++ +G GVGK+ ++ ++F + T +R K+VV + + +V Sbjct: 6 LHKVIMVGSGGVGKSALTLQFMYDEFVEDYEPTKADSYR-KKVVLDGE----------EV 54 Query: 69 HLQLWDTAGQERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVRNWMSQLQANAYCENPDI 128 + + DTAG E + ++ +FR GFL +F +T +SF ++ Q+ EN Sbjct: 55 QIDILDTAGLEDYAAIRDNYFRSGEGFLCVFSITEMESFAATADFREQILRVKEDENVPF 114 Query: 129 VLIGNKADLPDQREVNERQARELADKYGIPYFETSAATGQNVEKAVETLLDLIMKR 184 +L+GNK+DL D+R+V+ +A+ A+++ + Y ETSA T NV+K L+ I R Sbjct: 115 LLVGNKSDLEDKRQVSVEEAKNRAEQWNVNYVETSAKTRANVDKVFFDLMREIRAR 170 >2KE5-A nrPDB Length = 174 Score = 88.6 bits (218), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 55/181 (30%), Positives = 100/181 (55%), Gaps = 13/181 (7%) Query: 9 LIKLLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYNAQGPNGSSGKAFKV 68 L K++ +G GVGK+ ++ ++F + T +R K+VV + + +V Sbjct: 3 LHKVIMVGSGGVGKSALTLQFMYDEFVEDYEPTKADSYR-KKVVLDGE----------EV 51 Query: 69 HLQLWDTAGQERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVRNWMSQ-LQANAYCENPD 127 + + DTAG E + ++ +FR GFLL+F +T +SF + Q L+ A + Sbjct: 52 QIDILDTAGLEDYAAIRDNYFRSGEGFLLVFSITEHESFTATAEFREQILRVKAEEDKIP 111 Query: 128 IVLIGNKADLPDQREVNERQARELADKYGIPYFETSAATGQNVEKAVETLL-DLIMKRME 186 ++++GNK+DL ++R+V +AR A+++G+ Y ETSA T NV+K L+ ++ K+M Sbjct: 112 LLVVGNKSDLEERRQVPVEEARSKAEEWGVQYVETSAKTRANVDKVFFDLMREIRTKKMS 171 Query: 187 Q 187 + Sbjct: 172 E 172 >4WA7-A nrPDB Length = 170 Score = 88.2 bits (217), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 46/118 (38%), Positives = 72/118 (61%), Gaps = 1/118 (0%) Query: 70 LQLWDTAGQERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVRNWMSQLQANAYCENPDIV 129 L + DTAG E + ++ + R GFL +F + + +SF ++ ++ Q++ E+ +V Sbjct: 54 LDILDTAGLEEYSAMRDQYMRTGEGFLCVFAINNTKSFEDIHHYREQIKRVKDSEDVPMV 113 Query: 130 LIGNKADLPDQREVNERQARELADKYGIPYFETSAATGQNVEKAVETLLDLIMKRMEQ 187 L+GNK DLP R V+ +QA++LA YGIP+ ETSA T Q V+ A TL+ I K E+ Sbjct: 114 LVGNKCDLP-SRTVDTKQAQDLARSYGIPFIETSAKTRQGVDDAFYTLVREIRKHKEK 170 >5UHV-A nrPDB Length = 166 Score = 87.8 bits (216), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 45/109 (41%), Positives = 67/109 (61%), Gaps = 1/109 (0%) Query: 70 LQLWDTAGQERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVRNWMSQLQANAYCENPDIV 129 L + DTAGQE + ++ + R GFL +F + + +SF ++ + Q++ ++ +V Sbjct: 53 LDILDTAGQEEYSAMRDQYMRTGEGFLCVFAINNSKSFADINLYREQIKRVKDSDDVPMV 112 Query: 130 LIGNKADLPDQREVNERQARELADKYGIPYFETSAATGQNVEKAVETLL 178 L+GNK DLP R V+ +QA ELA YGIP+ ETSA T Q VE A TL+ Sbjct: 113 LVGNKCDLP-TRTVDTKQAHELAKSYGIPFIETSAKTRQGVEDAFYTLV 160 >5XC3-A nrPDB Length = 176 Score = 87.8 bits (216), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 50/170 (29%), Positives = 93/170 (54%), Gaps = 11/170 (6%) Query: 11 KLLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYNAQGPNGSSGKAFKVHL 70 K++ +G SGVGK++ ++++ N+ T+G F K+V+ +GK K L Sbjct: 7 KIILIGSSGVGKSSIVHQFLFNRKISNVSPTIGAAFASKQVI-------AKNGKTLK--L 57 Query: 71 QLWDTAGQERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVRNWMSQLQANAYCENPDIVL 130 +WDTAGQERFRS+T ++ +++G L++FD+T ++SF +V W++ L+ N + I++ Sbjct: 58 NIWDTAGQERFRSITKMYYTNSLGCLVVFDVTDRESFDDVYYWINDLRINCHTTYY-ILV 116 Query: 131 IGNKADL-PDQREVNERQARELADKYGIPYFETSAATGQNVEKAVETLLD 179 + NK D+ + V+E + ++ Y S+ V ++D Sbjct: 117 VANKIDIDKNNWRVSENEIKKFCRDNDCDYVFASSFESDTVNNLFGKMID 166 >3CON-A nrPDB Length = 190 Score = 87.8 bits (216), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 45/109 (41%), Positives = 67/109 (61%), Gaps = 1/109 (0%) Query: 70 LQLWDTAGQERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVRNWMSQLQANAYCENPDIV 129 L + DTAGQE + ++ + R GFL +F + + +SF ++ + Q++ ++ +V Sbjct: 71 LDILDTAGQEEYSAMRDQYMRTGEGFLCVFAINNSKSFADINLYREQIKRVKDSDDVPMV 130 Query: 130 LIGNKADLPDQREVNERQARELADKYGIPYFETSAATGQNVEKAVETLL 178 L+GNK DLP R V+ +QA ELA YGIP+ ETSA T Q VE A TL+ Sbjct: 131 LVGNKCDLP-TRTVDTKQAHELAKSYGIPFIETSAKTRQGVEDAFYTLV 178 >4DJT-A nrPDB Length = 218 Score = 85.1 bits (209), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 51/159 (32%), Positives = 81/159 (50%), Gaps = 10/159 (6%) Query: 11 KLLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYNAQGPNGSSGKAFKVHL 70 K+ +GD GVGKTT++ R D +F + TVG + QG + Sbjct: 13 KICLIGDGGVGKTTYINRVLDGRFEKNYNATVGA-VNHPVTFLDDQGN--------VIKF 63 Query: 71 QLWDTAGQERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVRNWMSQLQANAYCENPDIVL 130 +WDTAGQE+ L ++ A G +L FD+TS+ + N+ W+ + QA E P IV+ Sbjct: 64 NVWDTAGQEKKAVLKDVYYIGASGAILFFDVTSRITCQNLARWVKEFQAVVGNEAP-IVV 122 Query: 131 IGNKADLPDQREVNERQARELADKYGIPYFETSAATGQN 169 NK D+ ++++++++ E+ YFE SA T N Sbjct: 123 CANKIDIKNRQKISKKLVMEVLKGKNYEYFEISAKTAHN 161 >5WDQ-A nrPDB Length = 170 Score = 84.3 bits (207), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 44/109 (40%), Positives = 65/109 (59%), Gaps = 1/109 (0%) Query: 70 LQLWDTAGQERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVRNWMSQLQANAYCENPDIV 129 L + DTAGQE + ++ + R GFL +F + + +SF ++ + Q++ ++ +V Sbjct: 57 LDILDTAGQEEYSAMRDQYMRTGEGFLCVFAINNTKSFEDIHQYREQIKRVKDSDDVPMV 116 Query: 130 LIGNKADLPDQREVNERQARELADKYGIPYFETSAATGQNVEKAVETLL 178 L+GNK D R V RQA++LA YGIPY ETSA T Q VE A TL+ Sbjct: 117 LVGNKCDAA-ARTVESRQAQDLARSYGIPYIETSAKTRQGVEDAFYTLV 164 >4U5X-A nrPDB Length = 178 Score = 84.0 bits (206), Expect = 5e-17, Method: Compositional matrix adjust. Identities = 61/187 (32%), Positives = 91/187 (48%), Gaps = 25/187 (13%) Query: 9 LIKLLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYNAQGPNGSSGKAFKV 68 IK + +GD VGKT L YT NKF +I TV +F V +GS V Sbjct: 5 FIKCVTVGDGAVGKTCMLICYTSNKFPTDYIPTVFDNFSANVSV------DGSV-----V 53 Query: 69 HLQLWDTAGQERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNV-RNWMSQLQANAYCENPD 127 +L LWDTAG E + L +R A F+L F L S+ S+ NV + WM +L+ + Sbjct: 54 NLGLWDTAGLEDYSRLRPLSYRGADVFILSFSLISRASYENVQKKWMPELR--RFAPGVP 111 Query: 128 IVLIGNKADLPDQRE----------VNERQARELADKYG-IPYFETSAATGQNVEKAVET 176 +VL+G K DL + R + Q EL G + Y E S+ T +N++ +T Sbjct: 112 VVLVGTKLDLREDRAYLADHPASSIITTEQGEELRKLIGAVAYIECSSKTQRNIKAVFDT 171 Query: 177 LLDLIMK 183 + ++++ Sbjct: 172 AIKVVLQ 178 >2J1L-A nrPDB Length = 214 Score = 83.6 bits (205), Expect = 6e-17, Method: Compositional matrix adjust. Identities = 59/187 (31%), Positives = 91/187 (48%), Gaps = 27/187 (14%) Query: 10 IKLLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYNAQGPNGSSGKAFKVH 69 +K++ +GD G GKT+ L + D F + TV +R + N Q K VH Sbjct: 35 VKVVLVGDGGCGKTSLLMVFADGAFPESYTPTV-----FERYMVNLQV------KGKPVH 83 Query: 70 LQLWDTAGQERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVRN-WMSQLQANAYCENPDI 128 L +WDTAGQ+ + L F+ DA LL FD+TS SF N+ N W ++ N +C+ I Sbjct: 84 LHIWDTAGQDDYDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEV--NHFCKKVPI 141 Query: 129 VLIGNKADL-PDQREVNE-----------RQARELADKYG-IPYFETSAATGQNVEKAVE 175 +++G K DL D+ VN+ + +E+A G + Y E SA NV + Sbjct: 142 IVVGCKTDLRKDKSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNVHAVFQ 201 Query: 176 TLLDLIM 182 ++ + Sbjct: 202 EAAEVAL 208 >4KU4-A nrPDB Length = 206 Score = 83.6 bits (205), Expect = 6e-17, Method: Compositional matrix adjust. Identities = 56/201 (27%), Positives = 96/201 (47%), Gaps = 29/201 (14%) Query: 11 KLLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYNAQGPNGSSGKAFKVHL 70 K+ LG+ GVGKT+ T + F+ + T+ +R + V+ HL Sbjct: 16 KIAMLGEGGVGKTSLTVNLTKHVFSETYDPTLEDSYRRQCVI-----------DGIPSHL 64 Query: 71 QLWDTAGQERFRSLTTAFFRDAMGFLLMFDLTSQQSF----------LNVRNWMSQLQAN 120 ++ DTAGQE + +L + R F+++FD+T + SF + + + + + + Sbjct: 65 EILDTAGQEEYGALREQWIRQNELFVIVFDVTRRSSFEAAERLFEEVIQTKRKLDETRRH 124 Query: 121 AYCENPD--------IVLIGNKADLPDQREVNERQARELADKYGIPYFETSAATGQNVEK 172 +PD +VL+GNK DL +REV + LA K G + ETSA G NVE+ Sbjct: 125 PGDRHPDDLPFAPSLVVLVGNKCDLDTRREVGTLEGSSLAKKLGCGFVETSAKLGTNVEE 184 Query: 173 AVETLLDLIMKRMEQCVEKTQ 193 A +++ +R + ++ Q Sbjct: 185 AFFSVVRADRRRKREVTDEEQ 205 >3TH5-A nrPDB Length = 204 Score = 81.3 bits (199), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 61/184 (33%), Positives = 89/184 (48%), Gaps = 31/184 (16%) Query: 10 IKLLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYNAQGPNGSSGKAFKVH 69 IK + +GD VGKT L YT N F ++I TV ++ +V GK V+ Sbjct: 31 IKCVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMV---------DGKP--VN 79 Query: 70 LQLWDTAGQERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVR-NWMSQLQANAYCENPDI 128 L LWDTAGQE + L + FL+ F L S SF NVR W +++ +C N I Sbjct: 80 LGLWDTAGQEDYDRLRPLSYPQTDVFLICFSLVSPASFENVRAKWYPEVR--HHCPNTPI 137 Query: 129 VLIGNKADLPDQREVNER------------QARELADKYG-IPYFETSAATGQNVEKAVE 175 +L+G K DL D ++ E+ Q +A + G + Y E SA T ++ ++ Sbjct: 138 ILVGTKLDLRDDKDTIEKLKEKKLTPITYPQGLAMAKEIGAVKYLECSALT----QRGLK 193 Query: 176 TLLD 179 T+ D Sbjct: 194 TVFD 197 >2FN4-A nrPDB Length = 181 Score = 79.7 bits (195), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 44/118 (37%), Positives = 65/118 (55%) Query: 70 LQLWDTAGQERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVRNWMSQLQANAYCENPDIV 129 L + DTAGQE F ++ + R GFLL+F + +QSF V +Q+ ++ +V Sbjct: 59 LDILDTAGQEEFGAMREQYMRAGHGFLLVFAINDRQSFNEVGKLFTQILRVKDRDDFPVV 118 Query: 130 LIGNKADLPDQREVNERQARELADKYGIPYFETSAATGQNVEKAVETLLDLIMKRMEQ 187 L+GNKADL QR+V +A + + YFE SA NV++A E L+ + K EQ Sbjct: 119 LVGNKADLESQRQVPRSEASAFGASHHVAYFEASAKLRLNVDEAFEQLVRAVRKYQEQ 176 >4M8N-E nrPDB Length = 199 Score = 79.3 bits (194), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 50/172 (29%), Positives = 92/172 (53%), Gaps = 15/172 (8%) Query: 11 KLLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYNAQGPNGSSGKAFKVHL 70 KL+ LG GVGK+ ++ F K+ T+ +R K+V +AQ + L Sbjct: 8 KLVVLGSGGVGKSALTVQFVQGIFVEKYDPTIEDSYR-KQVEVDAQ----------QCML 56 Query: 71 QLWDTAGQERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVRNWMSQLQANAYCENPDIVL 130 ++ DTAG E+F ++ + ++ GF L++ +T+Q +F ++++ Q+ ++ ++L Sbjct: 57 EILDTAGTEQFTAMRDLYMKNGQGFALVYSITAQSTFNDLQDLREQILRVKDTDDVPMIL 116 Query: 131 IGNKADLPDQREVNERQARELADKY-GIPYFETSAATGQNVEKAVETLLDLI 181 +GNK DL D+R V + Q + LA ++ + E+SA + NV E DL+ Sbjct: 117 VGNKCDLEDERVVGKEQGQNLARQWNNCAFLESSAKSKINVN---EIFYDLV 165 >4KLZ-A nrPDB Length = 173 Score = 79.3 bits (194), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 48/178 (26%), Positives = 89/178 (50%), Gaps = 11/178 (6%) Query: 11 KLLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYNAQGPNGSSGKAFKVHL 70 KL+ LG GVGK+ ++ ++F T+ D + R+ + + N L Sbjct: 7 KLVMLGAGGVGKSAMTMQFISHRFPEDHDPTIE-DAYKIRIRIDDEPAN----------L 55 Query: 71 QLWDTAGQERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVRNWMSQLQANAYCENPDIVL 130 + DTAGQ F ++ + R GF++ + +T ++SF VR + + ++ +VL Sbjct: 56 DILDTAGQAEFTAMRDQYMRAGEGFIICYSITDRRSFHEVREFKQLIYRVRRTDDTPVVL 115 Query: 131 IGNKADLPDQREVNERQARELADKYGIPYFETSAATGQNVEKAVETLLDLIMKRMEQC 188 +GNK+DL R+V + + LA ++ P+FETSAA ++ L+ I ++ ++ Sbjct: 116 VGNKSDLKQLRQVTKEEGLALAREFSCPFFETSAAYRYYIDDVFHALVREIRRKEKEA 173 >3RYT-C nrPDB Length = 180 Score = 79.0 bits (193), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 61/190 (32%), Positives = 90/190 (47%), Gaps = 31/190 (16%) Query: 4 GDYDYLIKLLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYNAQGPNGSSG 63 G + IK + +GD VGKT L YT N F ++I TV ++ +V G Sbjct: 1 GPHMQAIKCVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMV---------DG 51 Query: 64 KAFKVHLQLWDTAGQERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVR-NWMSQLQANAY 122 K V+L LWDTAG E + L + FL+ F L S SF NVR W +++ + Sbjct: 52 KP--VNLGLWDTAGLEDYDRLRPLSYPQTDVFLICFSLVSPASFENVRAKWYPEVR--HH 107 Query: 123 CENPDIVLIGNKADLPDQREVNER------------QARELADKYG-IPYFETSAATGQN 169 C N I+L+G K DL D ++ E+ Q +A + G + Y E SA T Sbjct: 108 CPNTPIILVGTKLDLRDDKDTIEKLKEKKLTPITYPQGLAMAKEIGAVKYLECSALT--- 164 Query: 170 VEKAVETLLD 179 ++ ++T+ D Sbjct: 165 -QRGLKTVFD 173 >4DXA-A nrPDB Length = 169 Score = 79.0 bits (193), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 50/172 (29%), Positives = 92/172 (53%), Gaps = 15/172 (8%) Query: 11 KLLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYNAQGPNGSSGKAFKVHL 70 KL+ LG GVGK+ ++ F K+ T+ +R K+V +AQ + L Sbjct: 7 KLVVLGSVGVGKSALTVQFVQGIFVEKYDPTIEDSYR-KQVEVDAQ----------QCML 55 Query: 71 QLWDTAGQERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVRNWMSQLQANAYCENPDIVL 130 ++ DTAG E+F ++ + ++ GF L++ +T+Q +F ++++ Q+ ++ ++L Sbjct: 56 EILDTAGTEQFTAMRDLYMKNGQGFALVYSITAQSTFNDLQDLREQILRVKDTDDVPMIL 115 Query: 131 IGNKADLPDQREVNERQARELADKY-GIPYFETSAATGQNVEKAVETLLDLI 181 +GNK DL D+R V + Q + LA ++ + E+SA + NV E DL+ Sbjct: 116 VGNKCDLEDERVVGKEQGQNLARQWNNCAFLESSAKSKINVN---EIFYDLV 164 >2ERY-A nrPDB Length = 172 Score = 79.0 bits (193), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 46/119 (38%), Positives = 69/119 (57%), Gaps = 2/119 (1%) Query: 70 LQLWDTAGQERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVRNWMSQ-LQANAYCENPDI 128 L + DTAGQE F ++ + R GFLL+F +T + SF + + Q L+ E P + Sbjct: 55 LDILDTAGQEEFGAMREQYMRTGEGFLLVFSVTDRGSFEEIYKFQRQILRVKDRDEFP-M 113 Query: 129 VLIGNKADLPDQREVNERQARELADKYGIPYFETSAATGQNVEKAVETLLDLIMKRMEQ 187 +LIGNKADL QR+V + + ++LA + + Y E SA NV++A L+ +I K EQ Sbjct: 114 ILIGNKADLDHQRQVTQEEGQQLARQLKVTYMEASAKIRMNVDQAFHELVRVIRKFQEQ 172 >3OES-A nrPDB Length = 201 Score = 78.2 bits (191), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 48/158 (30%), Positives = 81/158 (51%), Gaps = 11/158 (6%) Query: 11 KLLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYNAQGPNGSSGKAFKVHL 70 K++ LG VGKT+ +++ + +F+ + TV N + GK + HL Sbjct: 26 KVVILGYRCVGKTSLAHQFVEGEFSEGYDPTVE----------NTYSKIVTLGKD-EFHL 74 Query: 71 QLWDTAGQERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVRNWMSQLQANAYCENPDIVL 130 L DTAGQ+ + L +F G++L++ +TS SF + + +L +VL Sbjct: 75 HLVDTAGQDEYSILPYSFIIGVHGYVLVYSVTSLHSFQVIESLYQKLHEGHGKTRVPVVL 134 Query: 131 IGNKADLPDQREVNERQARELADKYGIPYFETSAATGQ 168 +GNKADL +REV + ++LA+ +G + E+SA Q Sbjct: 135 VGNKADLSPEREVQAVEGKKLAESWGATFMESSARENQ 172 >2WKQ-A nrPDB Length = 332 Score = 77.8 bits (190), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 60/185 (32%), Positives = 89/185 (48%), Gaps = 31/185 (16%) Query: 9 LIKLLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYNAQGPNGSSGKAFKV 68 LIK + +GD VGKT L YT N F ++I TV ++ +V GK V Sbjct: 155 LIKCVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMV---------DGKP--V 203 Query: 69 HLQLWDTAGQERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVR-NWMSQLQANAYCENPD 127 +L LWDTAG E + L + FL+ F L S SF +VR W +++ +C N Sbjct: 204 NLGLWDTAGLEDYDRLRPLSYPQTDVFLICFSLVSPASFHHVRAKWYPEVR--HHCPNTP 261 Query: 128 IVLIGNKADLPDQREVNER------------QARELADKYG-IPYFETSAATGQNVEKAV 174 I+L+G K DL D ++ E+ Q +A + G + Y E SA T ++ + Sbjct: 262 IILVGTKLDLRDDKDTIEKLKEKKLTPITYPQGLAMAKEIGAVKYLECSALT----QRGL 317 Query: 175 ETLLD 179 +T+ D Sbjct: 318 KTVFD 322 >3E5H-A nrPDB Length = 178 Score = 77.0 bits (188), Expect = 6e-15, Method: Compositional matrix adjust. Identities = 46/169 (27%), Positives = 77/169 (45%), Gaps = 11/169 (6%) Query: 4 GDYDYLIKLLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYNAQGPNGSSG 63 G + +K++ LGD GKT+ + F ++ T+G+DF +R+ Sbjct: 1 GSHMRQLKIVVLGDGASGKTSLTTCFAQETFGKQYKQTIGLDFFLRRITLPGN------- 53 Query: 64 KAFKVHLQLWDTAGQERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVRNWMSQLQ--ANA 121 V LQ+WD GQ + + A G LL++D+T+ QSF N+ +W + ++ + Sbjct: 54 --LNVTLQIWDIGGQTIGGKMLDKYIYGAQGVLLVYDITNYQSFENLEDWYTVVKKVSEE 111 Query: 122 YCENPDIVLIGNKADLPDQREVNERQARELADKYGIPYFETSAATGQNV 170 P + L+GNK DL R + + + G SA TG +V Sbjct: 112 SETQPLVALVGNKIDLEHMRTIKPEKHLRFCQENGFSSHFVSAKTGDSV 160 >2W2X-A nrPDB Length = 185 Score = 76.6 bits (187), Expect = 7e-15, Method: Compositional matrix adjust. Identities = 58/184 (31%), Positives = 88/184 (47%), Gaps = 31/184 (16%) Query: 10 IKLLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYNAQGPNGSSGKAFKVH 69 IK + +GD VGKT L YT N F ++I TV D V+ +++ V+ Sbjct: 10 IKCVVVGDVAVGKTCLLISYTTNAFPGEYIPTV-FDNYSANVMVDSK----------PVN 58 Query: 70 LQLWDTAGQERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVR-NWMSQLQANAYCENPDI 128 L LWDTAGQE + L + FL+ F L S S+ NVR W +++ +C + I Sbjct: 59 LGLWDTAGQEDYDRLRPLSYPQTDVFLICFSLVSPASYENVRAKWFPEVR--HHCPSTPI 116 Query: 129 VLIGNKADLPDQREVNER------------QARELADKY-GIPYFETSAATGQNVEKAVE 175 +L+G K DL D ++ E+ Q LA + + Y E SA T ++ ++ Sbjct: 117 ILVGTKLDLRDDKDTIEKLKEKKLAPITYPQGLALAKEIDSVKYLECSALT----QRGLK 172 Query: 176 TLLD 179 T+ D Sbjct: 173 TVFD 176 >5WDR-A nrPDB Length = 171 Score = 75.9 bits (185), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 40/114 (35%), Positives = 63/114 (55%) Query: 70 LQLWDTAGQERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVRNWMSQLQANAYCENPDIV 129 L + DTAGQE + ++ + R GFL ++ + SQQS + ++ Q+ + ++ Sbjct: 57 LDILDTAGQEDYSAMRDQYMRTGEGFLCVYSIDSQQSLDEIHSFREQILRVKDQDEVPMI 116 Query: 130 LIGNKADLPDQREVNERQARELADKYGIPYFETSAATGQNVEKAVETLLDLIMK 183 L+GNK DL + REV+ + +A Y IP+ ETSA NVE+A L+ I K Sbjct: 117 LVGNKCDLEEHREVSTEAGQAVAKSYSIPFMETSAKKRINVEEAFYQLVREIRK 170 >1RYH-A nrPDB Length = 203 Score = 75.9 bits (185), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 62/203 (30%), Positives = 91/203 (44%), Gaps = 50/203 (24%) Query: 10 IKLLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYNAQGPNGSSGKAFKVH 69 IK + +GD VGKT L YT N F ++I TV ++ +V GK V+ Sbjct: 6 IKCVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMV---------DGKP--VN 54 Query: 70 LQLWDTAGQERFRSLTTAFFRDAMG-------------------FLLMFDLTSQQSFLNV 110 L LWDTAGQE + L + +G FL+ F L S SF NV Sbjct: 55 LGLWDTAGQEDYDRLRPLSYPQTVGETYGKDITSRGKDKPIADVFLICFSLVSPASFENV 114 Query: 111 R-NWMSQLQANAYCENPDIVLIGNKADLPDQREVNER------------QARELADKYG- 156 R W +++ +C N I+L+G K DL D ++ E+ Q +A + G Sbjct: 115 RAKWYPEVR--HHCPNTPIILVGTKLDLRDDKDTIEKLKEKKLTPITYPQGLAMAKEIGA 172 Query: 157 IPYFETSAATGQNVEKAVETLLD 179 + Y E SA T ++ ++T+ D Sbjct: 173 VKYLECSALT----QRGLKTVFD 191 >5VCU-A nrPDB Length = 208 Score = 75.5 bits (184), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 61/191 (31%), Positives = 85/191 (44%), Gaps = 31/191 (16%) Query: 10 IKLLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYNAQGPNGSSGKAFKVH 69 IK + +GD VGKT L Y+ F ++ TV + YN P G V Sbjct: 12 IKCVVVGDGAVGKTALLIAYSSGCFPEDYVPTVFDN-------YNKNIPYGDG----IVS 60 Query: 70 LQLWDTAGQERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVRN-WMSQLQANAYCENPD- 127 + L+DTAGQE + L + D FL+ F L + S N + W +L+ NPD Sbjct: 61 IALYDTAGQEDYDRLRPLSYPDTDVFLVCFSLENPNSLENCHSKWAEELKHY----NPDT 116 Query: 128 -IVLIGNKADLPDQRE------------VNERQARELADKY-GIPYFETSAATGQNVEKA 173 IVL+G K DL E V Q +E+ DK Y E SA T +N+ +A Sbjct: 117 PIVLVGTKLDLKKDEEYVKKLKEKKISPVTTEQGQEMKDKIKACGYIECSAKTMENLTEA 176 Query: 174 VETLLDLIMKR 184 +D+ MK+ Sbjct: 177 FNMAIDIAMKQ 187 >2ERX-A nrPDB Length = 172 Score = 75.5 bits (184), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 52/179 (29%), Positives = 87/179 (48%), Gaps = 14/179 (7%) Query: 7 DYLIKLLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYNAQGPNGSSGKAF 66 DY ++ G GVGK++ + R+ F +I TV +R+ V+ S K+ Sbjct: 3 DY--RVAVFGAGGVGKSSLVLRFVKGTFRESYIPTVEDTYRQ--VI--------SCDKSI 50 Query: 67 KVHLQLWDTAGQERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVRNWMSQL-QANAYCEN 125 LQ+ DT G +F ++ F+L++ +TS+QS ++ Q+ + E+ Sbjct: 51 -CTLQITDTTGSHQFPAMQRLSISKGHAFILVYSITSRQSLEELKPIYEQICEIKGDVES 109 Query: 126 PDIVLIGNKADLPDQREVNERQARELADKYGIPYFETSAATGQNVEKAVETLLDLIMKR 184 I+L+GNK D REV +A LA + + ETSA NV++ + LL+L +R Sbjct: 110 IPIMLVGNKCDESPSREVQSSEAEALARTWKCAFMETSAKLNHNVKELFQELLNLEKRR 168 >3CLV-A nrPDB Length = 208 Score = 74.7 bits (182), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 50/202 (24%), Positives = 94/202 (46%), Gaps = 31/202 (15%) Query: 11 KLLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRV------------------- 51 K + LG+S VGK++ + R T + F+ TT+G F V Sbjct: 9 KTVLLGESSVGKSSIVLRLTKDTFHENTNTTIGASFCTYVVNLNDINIKNNSNNEKNNNI 68 Query: 52 --------VYNAQGPNGSSGKAFKVHLQLWDTAGQERFRSLTTAFFRDAMGFLLMFDLTS 103 V N + + +WDTAGQER+ S+ ++R A +++FD+++ Sbjct: 69 NSINDDNNVIITNQHNNYNENLCNIKFDIWDTAGQERYASIVPLYYRGATCAIVVFDISN 128 Query: 104 QQSFLNVRNWMSQLQANAYCENPDIVLIGNKADLPDQREVNERQARELADKYGIPYFETS 163 + + W++QL+ ++ N I+L+ NK D ++ +V+ + ++ A + + +TS Sbjct: 129 SNTLDRAKTWVNQLKISS---NYIIILVANKID-KNKFQVDILEVQKYAQDNNLLFIQTS 184 Query: 164 AATGQNVEKAVETLLDLIMKRM 185 A TG N++ L + I K + Sbjct: 185 AKTGTNIKNIFYMLAEEIYKNI 206 >2Q3H-A nrPDB Length = 201 Score = 73.9 bits (180), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 53/178 (29%), Positives = 86/178 (48%), Gaps = 27/178 (15%) Query: 10 IKLLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYNAQGPNGSSGKAFKVH 69 +K + +GD VGKT+ + YT N + ++I T +F V + G V Sbjct: 21 VKCVLVGDGAVGKTSLVVSYTTNGYPTEYIPTAFDNFS---AVVSVDG--------RPVR 69 Query: 70 LQLWDTAGQERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNV-RNWMSQLQANAYCENPDI 128 LQL DTAGQ+ F L + + FLL F + S SF NV W+ +++ +C I Sbjct: 70 LQLCDTAGQDEFDKLRPLCYTNTDIFLLCFSVVSPSSFQNVSEKWVPEIR--CHCPKAPI 127 Query: 129 VLIGNKADLPD------------QREVNERQARELADKY-GIPYFETSAATGQNVEKA 173 +L+G ++DL + ++ V E A+ LA++ Y E SA T +N+++ Sbjct: 128 ILVGTQSDLREDVKVLIELDKCKEKPVPEEAAKLLAEEIKAASYIECSALTQKNLKEV 185 >3PIR-A nrPDB Length = 183 Score = 72.8 bits (177), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 41/113 (36%), Positives = 63/113 (55%), Gaps = 1/113 (0%) Query: 70 LQLWDTAGQERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVRNWMSQLQANAYCENPDIV 129 L + DTAGQE F ++ + R GFL+++ +T + SF +V + + E+ ++ Sbjct: 68 LDVLDTAGQEEFSAMREQYMRTGDGFLIVYSVTDKASFEHVDRFHQLILRVKDRESFPMI 127 Query: 130 LIGNKADLPDQREVNERQARELADKYGIPYFETSAATGQ-NVEKAVETLLDLI 181 L+ NK DL R+V Q +E+A KY IPY ETSA NV+K L+ +I Sbjct: 128 LVANKVDLMHLRKVTRDQGKEMATKYNIPYIETSAKDPPLNVDKTFHDLVRVI 180 >5ZHX-e nrPDB Length = 198 Score = 71.2 bits (173), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 52/179 (29%), Positives = 80/179 (44%), Gaps = 27/179 (15%) Query: 11 KLLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYNAQGPNGSSGKAFKVHL 70 KL+ +GD GKT L ++ ++F ++ TV ++ V Q V L Sbjct: 12 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQ-----------VEL 60 Query: 71 QLWDTAGQERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNV-RNWMSQLQANAYCENPDIV 129 LWDTAGQE + L + D L+ F + S S N+ W +++ +C N I+ Sbjct: 61 ALWDTAGQEDYDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVK--HFCPNVPII 118 Query: 130 LIGNKADLPD------------QREVNERQARELADKYG-IPYFETSAATGQNVEKAVE 175 L+GNK DL + Q V + R++A++ G Y E SA T V + E Sbjct: 119 LVGNKKDLRNDEHTRRELAKMKQEPVKPEEGRDMANRIGAFGYMECSAKTKDGVREVFE 177 >3RAP-R nrPDB Length = 167 Score = 70.9 bits (172), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 37/103 (35%), Positives = 65/103 (63%) Query: 70 LQLWDTAGQERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVRNWMSQLQANAYCENPDIV 129 L++ DTAG E+F S+ + ++ GF+L++ L +QQSF +++ Q+ E ++ Sbjct: 53 LEILDTAGTEQFASMRDLYIKNGQGFILVYSLVNQQSFQDIKPMRDQIIRVKRYEKVPVI 112 Query: 130 LIGNKADLPDQREVNERQARELADKYGIPYFETSAATGQNVEK 172 L+GNK DL +REV+ + R LA+++G P+ ETSA + V++ Sbjct: 113 LVGNKVDLESEREVSSSEGRALAEEWGCPFMETSAKSKTMVDE 155 >5C2K-A nrPDB Length = 415 Score = 70.1 bits (170), Expect = 6e-13, Method: Compositional matrix adjust. Identities = 52/179 (29%), Positives = 80/179 (44%), Gaps = 27/179 (15%) Query: 11 KLLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYNAQGPNGSSGKAFKVHL 70 KL+ +GD GKT L ++ ++F ++ TV ++ V Q V L Sbjct: 14 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQ-----------VEL 62 Query: 71 QLWDTAGQERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNV-RNWMSQLQANAYCENPDIV 129 LWDTAGQE + L + D L+ F + S S N+ W +++ +C N I+ Sbjct: 63 ALWDTAGQEDYDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVK--HFCPNVPII 120 Query: 130 LIGNKADLPD------------QREVNERQARELADKYG-IPYFETSAATGQNVEKAVE 175 L+GNK DL + Q V + R++A++ G Y E SA T V + E Sbjct: 121 LVGNKKDLRNDEHTRRELAKMKQEPVKPEEGRDMANRIGAFGYMECSAKTKDGVREVFE 179 >2ATV-A nrPDB Length = 196 Score = 69.7 bits (169), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 45/159 (28%), Positives = 79/159 (49%), Gaps = 12/159 (7%) Query: 10 IKLLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYNAQGPNGSSGKAFKVH 69 +KL G +GVGK+ + R+ +F ++ T+ +R + + + V Sbjct: 29 VKLAIFGRAGVGKSALVVRFLTKRFIWEYDPTLESTYRHQATIDDEV-----------VS 77 Query: 70 LQLWDTAGQERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVRNWMSQLQANAYCENPDIV 129 +++ DTAGQE R GF+L++D+T + SF V + L +N ++ Sbjct: 78 MEILDTAGQEDTIQ-REGHMRWGEGFVLVYDITDRGSFEEVLPLKNILDEIKKPKNVTLI 136 Query: 130 LIGNKADLPDQREVNERQARELADKYGIPYFETSAATGQ 168 L+GNKADL R+V+ + +LA + ++E SA TG+ Sbjct: 137 LVGNKADLDHSRQVSTEEGEKLATELACAFYECSACTGE 175 >4MIT-A nrPDB Length = 186 Score = 68.9 bits (167), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 58/187 (31%), Positives = 88/187 (47%), Gaps = 31/187 (16%) Query: 10 IKLLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYNAQGPNGSSGKAFKVH 69 IKL+ +GD VGKT L Y+ KF +I TV ++ VV G ++ Sbjct: 11 IKLVVVGDGAVGKTCLLISYSIRKFPEDYIPTVFDNY----VVSLTAGTR-------QIQ 59 Query: 70 LQLWDTAGQERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNV-RNWMSQLQANAYCENPDI 128 L LWDTAG E + L + A FL+ F +TS S+ NV W ++ + I Sbjct: 60 LALWDTAGLEEYDQLRPLSYSSASIFLICFSVTSSVSYDNVITKWHPEVI--HFAPKVPI 117 Query: 129 VLIGNKAD----------LPDQ--REVNERQARELADKY-GIPYFETSAATGQNV----E 171 +L+G K D L +Q +N + EL ++ + Y E SA T +N+ + Sbjct: 118 ILVGTKLDTRNDPAIVKRLTEQGMTVINTAKGEELKNRIKAVKYIECSAKTSENLKTVFD 177 Query: 172 KAVETLL 178 +AV+T+L Sbjct: 178 EAVKTVL 184 >5JCP-B nrPDB Length = 419 Score = 67.4 bits (163), Expect = 5e-12, Method: Compositional matrix adjust. Identities = 52/179 (29%), Positives = 79/179 (44%), Gaps = 27/179 (15%) Query: 11 KLLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYNAQGPNGSSGKAFKVHL 70 KL+ +GD GKT L + ++F ++ TV ++ V Q V L Sbjct: 245 KLVIVGDGACGKTCLLIVNSKDQFPEVYVPTVFENYVADIEVDGKQ-----------VEL 293 Query: 71 QLWDTAGQERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNV-RNWMSQLQANAYCENPDIV 129 LWDTAGQE + L + D L+ F + S S N+ W +++ +C N I+ Sbjct: 294 ALWDTAGQEDYDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVK--HFCPNVPII 351 Query: 130 LIGNKADLPD------------QREVNERQARELADKYG-IPYFETSAATGQNVEKAVE 175 L+GNK DL + Q V + R++A++ G Y E SA T V + E Sbjct: 352 LVGNKKDLRNDEHTRRELAKMKQEPVKPEEGRDMANRIGAFGYMECSAKTKDGVREVFE 410 >3VHL-B nrPDB Length = 195 Score = 66.6 bits (161), Expect = 8e-12, Method: Compositional matrix adjust. Identities = 50/176 (28%), Positives = 81/176 (46%), Gaps = 27/176 (15%) Query: 10 IKLLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYNAQGPNGSSGKAFKVH 69 IK + +GD VGK L YT NKF +++ TV ++ ++ G+ + Sbjct: 11 IKCVVVGDGAVGKNCLLISYTTNKFPSEYVPTVFDNYAVTVMI---------GGEPYT-- 59 Query: 70 LQLWDTAGQERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVR-NWMSQLQANAYCENPDI 128 L L+DTAGQE + L + FL+ F + S SF NV+ W+ ++ +C Sbjct: 60 LGLFDTAGQEDYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEI--THHCPKTPF 117 Query: 129 VLIGNKADLPD------------QREVNERQARELA-DKYGIPYFETSAATGQNVE 171 +L+G + DL D Q+ + A +LA D + Y E SA T + ++ Sbjct: 118 LLVGTQIDLRDDPSTIEKLAKNKQKPITPETAEKLARDLKAVKYVECSALTQKGLK 173 >3A58-B nrPDB Length = 188 Score = 66.6 bits (161), Expect = 9e-12, Method: Compositional matrix adjust. Identities = 50/180 (27%), Positives = 82/180 (45%), Gaps = 27/180 (15%) Query: 11 KLLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYNAQGPNGSSGKAFKVHL 70 KL+ +GD GKT L + +F ++ TV ++ V +V L Sbjct: 12 KLVIVGDGACGKTCLLIVNSKGQFPEVYVPTVFENYVADVEV-----------DGRRVEL 60 Query: 71 QLWDTAGQERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVR-NWMSQLQANAYCENPDIV 129 LWDTAGQE + L + D+ L+ F + S NV+ W++++ +C+ I+ Sbjct: 61 ALWDTAGQEDYDRLRPLSYPDSNVVLICFSIDLPDSLENVQEKWIAEVL--HFCQGVPII 118 Query: 130 LIGNKADLPD------------QREVNERQARELADKYGIP-YFETSAATGQNVEKAVET 176 L+G K DL + Q+ V ++ + +AD+ G Y+E SA TG V + E Sbjct: 119 LVGCKVDLRNDPQTIEQLRQEGQQPVTSQEGQSVADQIGATGYYECSAKTGYGVREVFEA 178 >3T5G-A nrPDB Length = 181 Score = 66.2 bits (160), Expect = 9e-12, Method: Compositional matrix adjust. Identities = 46/173 (26%), Positives = 84/173 (48%), Gaps = 14/173 (8%) Query: 11 KLLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYNAQGPNGSSGKAFKVHL 70 K+ LG VGK++ ++ + +F + T+ F K + N Q + HL Sbjct: 8 KIAILGYRSVGKSSLTIQFVEGQFVDSYDPTIENTFT-KLITVNGQ----------EYHL 56 Query: 71 QLWDTAGQERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVRNWMSQLQANAYCENPDIVL 130 QL DTAGQ+ + + D G++L++ +TS +SF ++ +L I+L Sbjct: 57 QLVDTAGQDEYSIFPQTYSIDINGYILVYSVTSIKSFEVIKVIHGKLLDMVGKVQIPIML 116 Query: 131 IGNKADLPDQREVNERQARELADKYGIPYFETSAATGQNVEKAVETLLDLIMK 183 +GNK DL +R ++ + + LA+ + + E+SA Q AV+ +I++ Sbjct: 117 VGNKKDLHMERVISYEEGKALAESWNAAFLESSAKENQT---AVDVFRRIILE 166 >5ZVP-A nrPDB Length = 181 Score = 65.5 bits (158), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 54/180 (30%), Positives = 78/180 (43%), Gaps = 27/180 (15%) Query: 11 KLLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYNAQGPNGSSGKAFKVHL 70 KL+ +GD GKT L + F ++ TV ++ V GK V L Sbjct: 7 KLVIVGDGACGKTCLLIVNSKGTFPEVYVPTVFENYVADVEV---------DGK--HVEL 55 Query: 71 QLWDTAGQERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVR-NWMSQLQANAYCENPDIV 129 LWDTAGQE + L + D+ L+ F + S S NV+ W+S++ +C+ I+ Sbjct: 56 ALWDTAGQEDYDRLRPLSYPDSHVILICFAIDSPDSLDNVQEKWISEVL--HFCQGLPII 113 Query: 130 LIGNKADL------------PDQREVNERQARELADKYGI-PYFETSAATGQNVEKAVET 176 L+G K DL Q+ V Q E+ K G Y E SA T + V + E Sbjct: 114 LVGCKKDLRHDPKTIEELHKTSQKPVTPEQGEEVRKKIGAYKYLECSARTNEGVREVFEA 173 >2FV8-A nrPDB Length = 207 Score = 65.5 bits (158), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 51/180 (28%), Positives = 75/180 (41%), Gaps = 27/180 (15%) Query: 11 KLLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYNAQGPNGSSGKAFKVHL 70 KL+ +GD GKT L ++ ++F ++ TV N GK +V L Sbjct: 27 KLVVVGDGACGKTCLLIVFSKDEFPEVYVPTV---------FENYVADIEVDGK--QVEL 75 Query: 71 QLWDTAGQERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNV-RNWMSQLQANAYCENPDIV 129 LWDTAGQE + L + D L+ F + S S N+ W+ +++ +C N I+ Sbjct: 76 ALWDTAGQEDYDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWVPEVK--HFCPNVPII 133 Query: 130 LIGNKADLPDQREVNERQARELADKY-------------GIPYFETSAATGQNVEKAVET 176 L+ NK DL V AR + Y E SA T + V + ET Sbjct: 134 LVANKKDLRSDEHVRTELARMKQEPVRTDDGRAMAVRIQAYDYLECSAKTKEGVREVFET 193 >2ATX-A nrPDB Length = 194 Score = 65.1 bits (157), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 55/193 (28%), Positives = 88/193 (45%), Gaps = 31/193 (16%) Query: 1 MTDGDYDYLIKLLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYNAQGPNG 60 M G ++K + +GD VGKT L Y ++ F +++ TV + V Sbjct: 10 MAHGPGALMLKCVVVGDGAVGKTCLLMSYANDAFPEEYVPTVFDHYAVSVTV-------- 61 Query: 61 SSGKAFKVHLQLWDTAGQERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVR-NWMSQLQA 119 GK + L L+DTAGQE + L + FL+ F + + SF NV+ W+ +L+ Sbjct: 62 -GGKQY--LLGLYDTAGQEDYDRLRPLSYPMTDVFLICFSVVNPASFQNVKEEWVPELK- 117 Query: 120 NAYCENPDIVLIGNKADLPD------------QREVNERQARELADKYG-IPYFETSAAT 166 Y N +LIG + DL D ++ + Q ++LA + G Y E SA T Sbjct: 118 -EYAPNVPFLLIGTQIDLRDDPKTLARLNDMKEKPICVEQGQKLAKEIGACCYVECSALT 176 Query: 167 GQNVEKAVETLLD 179 +K ++T+ D Sbjct: 177 ----QKGLKTVFD 185 >3CBQ-A nrPDB Length = 195 Score = 64.7 bits (156), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 52/184 (28%), Positives = 86/184 (46%), Gaps = 15/184 (8%) Query: 4 GDYDYLIKLLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYNAQGPNGSSG 63 G D + K++ +G+SGVGK+T + + + D E+R++ + + Sbjct: 18 GQKDGIFKVMLVGESGVGKSTLAGTFGGLQGDSAHEPENPEDTYERRIMVDKE------- 70 Query: 64 KAFKVHLQLW---DTAGQERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVRNWMSQLQAN 120 + V +W D G R L T DA FL++F +T ++SF V + +L+A Sbjct: 71 EVTLVVYDIWEQGDAGGWLRDHCLQTG---DA--FLIVFSVTDRRSFSKVPETLLRLRAG 125 Query: 121 AYCENPDIVLIGNKADLPDQREVNERQARELADKYGIPYFETSAATGQNVEKAVETLLDL 180 + ++L+GNK+DL REV+ + R LA + ETSAA N + E + Sbjct: 126 RPHHDLPVILVGNKSDLARSREVSLEEGRHLAGTLSCKHIETSAALHHNTRELFEGAVRQ 185 Query: 181 IMKR 184 I R Sbjct: 186 IRLR 189 >3REG-A nrPDB Length = 194 Score = 63.9 bits (154), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 48/177 (27%), Positives = 82/177 (46%), Gaps = 17/177 (9%) Query: 10 IKLLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYNAQGPNGSSGKAFKVH 69 +K++ +GD VGKT L ++ + ++ TV +F N + F +H Sbjct: 24 LKIVVVGDGAVGKTCLLLAFSKGEIPTAYVPTVFENFSHVMKYKNEE---------FILH 74 Query: 70 LQLWDTAGQERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVRN-WMSQLQANAYCENPDI 128 L WDTAGQE + L + D+ LL F + ++ SF N+ W +++ Y + Sbjct: 75 L--WDTAGQEEYDRLRPLSYADSDVVLLCFAVNNRTSFDNISTKWEPEIK--HYIDTAKT 130 Query: 129 VLIGNKADLPD--QREVNERQARELADKYG-IPYFETSAATGQNVEKAVETLLDLIM 182 VL+G K DL +V +++ +L K G + Y E S+ + + E +D I Sbjct: 131 VLVGLKVDLRKDGSDDVTKQEGDDLCQKLGCVAYIEASSVAKIGLNEVFEKSVDCIF 187 >2GF0-A nrPDB Length = 199 Score = 63.5 bits (153), Expect = 7e-11, Method: Compositional matrix adjust. Identities = 46/166 (27%), Positives = 84/166 (50%), Gaps = 17/166 (10%) Query: 22 KTTFLYRYTDNKFNPKFITTVGIDFREKRVVYNAQGPNGSSGKAFKVHLQLWDTAGQERF 81 K++ + R+ F +I T+ +R+ V+ S K+ LQ+ DT G +F Sbjct: 21 KSSLVLRFVKGTFRDTYIPTIEDTYRQ--VI--------SCDKSV-CTLQITDTTGSHQF 69 Query: 82 RSLTTAFFRDAMGFLLMFDLTSQQSFLN---VRNWMSQLQANAYCENPDIVLIGNKADLP 138 ++ F+L+F +TS+QS + + Q++ + E+ ++L+GNK D Sbjct: 70 PAMQRLSISKGHAFILVFSVTSKQSLEELGPIYKLIVQIKGSV--EDIPVMLVGNKCD-E 126 Query: 139 DQREVNERQARELADKYGIPYFETSAATGQNVEKAVETLLDLIMKR 184 QREV+ R+A+ +A ++ + ETSA NV++ + LL L +R Sbjct: 127 TQREVDTREAQAVAQEWKCAFMETSAKMNYNVKELFQELLTLETRR 172 >4ILE-A nrPDB Length = 184 Score = 61.2 bits (147), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 44/172 (25%), Positives = 75/172 (43%), Gaps = 17/172 (9%) Query: 10 IKLLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYNAQGPNGSSGKAFKVH 69 ++L +G GKTTF+ +FN I TVG + R+ + G V Sbjct: 23 MELTLVGLQYSGKTTFVNVIASGQFNEDMIPTVGFNMRKI-----------TKGN---VT 68 Query: 70 LQLWDTAGQERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVRNWMSQLQANAYCENPDIV 129 ++LWD GQ RFRS+ + R + M D Q+ +N + L + ++ Sbjct: 69 IKLWDIGGQPRFRSMWERYCRGVSAIVYMVDAADQEKIEASKNELHNLLDKPQLQGIPVL 128 Query: 130 LIGNKADLP---DQREVNERQARELADKYGIPYFETSAATGQNVEKAVETLL 178 ++GNK DLP D++E+ E+ I + S N++ ++ L+ Sbjct: 129 VLGNKRDLPGALDEKELIEKMNLSAIQDREICCYSISCKEKDNIDITLQWLI 180 >5HZH-A nrPDB Length = 332 Score = 60.1 bits (144), Expect = 6e-10, Method: Compositional matrix adjust. Identities = 45/134 (33%), Positives = 66/134 (49%), Gaps = 22/134 (16%) Query: 60 GSSGKAFKVHLQLWDTAGQERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVR-NWMSQLQ 118 GS GK V+L LWDTAG E + L + FL+ F L S SF NVR W +++ Sbjct: 197 GSGGKP--VNLGLWDTAGLEDYDRLRPLSYPQTDVFLICFSLVSPASFENVRAKWYPEVR 254 Query: 119 ANAYCENPDIVLIGNKADLPDQREVNER------------QARELADKYG-IPYFETSAA 165 +C N I+L+G K DL D ++ E+ Q +A + G + Y E SA Sbjct: 255 --HHCPNTPIILVGTKLDLRDDKDTIEKLKEKKLTPITYPQGLAMAKEIGAVKYLECSAL 312 Query: 166 TGQNVEKAVETLLD 179 T ++ ++T+ D Sbjct: 313 T----QRGLKTVFD 322 Score = 34.7 bits (78), Expect = 0.029, Method: Compositional matrix adjust. Identities = 16/33 (48%), Positives = 20/33 (60%) Query: 10 IKLLALGDSGVGKTTFLYRYTDNKFNPKFITTV 42 IK + +GD VGKT L YT N F ++I TV Sbjct: 7 IKCVVVGDGAVGKTCLLISYTTNAFPGEYIPTV 39 >3Q85-A nrPDB Length = 169 Score = 59.7 bits (143), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 46/170 (27%), Positives = 81/170 (47%), Gaps = 15/170 (8%) Query: 9 LIKLLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYNAQGPNGSSGKAFKV 68 + K++ +G+SGVGK+T + + + D E+R++ + + + + Sbjct: 2 VFKVMLVGESGVGKSTLAGTFGGLQGDHAHEMENSEDTYERRIMVDKE-------EVTLI 54 Query: 69 HLQLW---DTAGQERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVRNWMSQLQANAYCEN 125 +W D G + L T DA FL++F +T ++SF V + +L+A + Sbjct: 55 VYDIWEQGDAGGWLQDHCLQTG---DA--FLIVFSVTDRRSFSKVPETLLRLRAGRPHHD 109 Query: 126 PDIVLIGNKADLPDQREVNERQARELADKYGIPYFETSAATGQNVEKAVE 175 ++L+GNK+DL REV+ + R LA + ETSAA N + E Sbjct: 110 LPVILVGNKSDLARSREVSLEEGRHLAGTLSCKHIETSAALHHNTRELFE 159 >2YC4-C nrPDB Length = 208 Score = 58.5 bits (140), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 46/159 (28%), Positives = 80/159 (50%), Gaps = 13/159 (8%) Query: 11 KLLALGDSGVGKTTFLYRYTD--NKFNPKFITTVGIDFREKRVVYNAQGPNGSSGKAFKV 68 K+ +G++ VGK+ + +T +KF + T G++ VV P+ + V Sbjct: 22 KVAVVGEATVGKSALISMFTSKGSKFLKDYAMTSGVEV----VVAPVTIPDTT----VSV 73 Query: 69 HLQLWDTAGQERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVRNWMSQLQ-ANAYCENP- 126 L L DTAG + ++ + ++ +L+FD++S +SF + + W L+ A E P Sbjct: 74 ELFLLDTAGSDLYKEQISQYWNGVYYAILVFDVSSMESFESCKAWFELLKSARPDRERPL 133 Query: 127 DIVLIGNKADLPDQR-EVNERQARELADKYGIPYFETSA 164 VL+ NK DLP QR +V A++ A + +F+ SA Sbjct: 134 RAVLVANKTDLPPQRHQVRLDMAQDWATTNTLDFFDVSA 172 >5NZV-F nrPDB Length = 181 Score = 58.2 bits (139), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 45/176 (25%), Positives = 74/176 (42%), Gaps = 28/176 (15%) Query: 10 IKLLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYNAQGPNGSSGKAFKVH 69 +++L +G G GKTT LY+ K T I F + V Y + Sbjct: 18 MRILMVGLDGAGKTTVLYKL---KLGEVITTIPTIGFNVETVQYK------------NIS 62 Query: 70 LQLWDTAGQERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVRNWMSQLQANAYCENPDIV 129 +WD GQ+R RSL ++R+ G + + D + R M ++ N + Sbjct: 63 FTVWDVGGQDRIRSLWRHYYRNTEGVIFVVDSNDRSRIGEAREVMQRMLNEDELRNAAWL 122 Query: 130 LIGNKADLPDQREVNERQARELADKYGI------PYF--ETSAATGQNVEKAVETL 177 + NK DLP+ A E+ +K G+ P+F T A +G+ + + +E L Sbjct: 123 VFANKQDLPEA-----MSAAEITEKLGLHSIRNRPWFIQATCATSGEGLYEGLEWL 173 >2AL7-A nrPDB Length = 186 Score = 57.8 bits (138), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 41/172 (23%), Positives = 75/172 (43%), Gaps = 17/172 (9%) Query: 10 IKLLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYNAQGPNGSSGKAFKVH 69 ++L +G GKTTF+ +F+ I TVG + R+ +G V Sbjct: 23 MELTLVGLQYSGKTTFVNVIASGQFSEDMIPTVGFNMRKV-----TKG---------NVT 68 Query: 70 LQLWDTAGQERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVRNWMSQLQANAYCENPDIV 129 +++WD GQ RFRS+ + R + M D ++ RN + L + ++ Sbjct: 69 IKIWDIGGQPRFRSMWERYCRGVNAIVYMIDAADREKIEASRNELHNLLDKPQLQGIPVL 128 Query: 130 LIGNKADLP---DQREVNERQARELADKYGIPYFETSAATGQNVEKAVETLL 178 ++GNK DLP D++++ E+ I + S N++ ++ L+ Sbjct: 129 VLGNKRDLPNALDEKQLIEKMNLSAIQDREICCYSISCKEKDNIDITLQWLI 180 >2G3Y-A nrPDB Length = 211 Score = 57.8 bits (138), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 42/170 (24%), Positives = 82/170 (48%), Gaps = 12/170 (7%) Query: 11 KLLALGDSGVGKTTF--LYRYTDNKFNPKFITTVGIDFREKRVVYNAQGPNGSSGKAFKV 68 +++ +G+ GVGK+T ++ + + +G D E+ ++ + + A + Sbjct: 39 RVVLIGEQGVGKSTLANIFAGVHDSMDSD-CEVLGEDTYERTLMVDGE-------SATII 90 Query: 69 HLQLWDTAGQERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVRNWMSQLQANAYCENPDI 128 L +W+ G+ + DA +L+++ +T + SF QL+ E+ I Sbjct: 91 LLDMWENKGENEWLHDHCMQVGDA--YLIVYSITDRASFEKASELRIQLRRARQTEDIPI 148 Query: 129 VLIGNKADLPDQREVNERQARELADKYGIPYFETSAATGQNVEKAVETLL 178 +L+GNK+DL REV+ + R A + + ETSAA NV++ E ++ Sbjct: 149 ILVGNKSDLVRCREVSVSEGRACAVVFDCKFIETSAAVQHNVKELFEGIV 198 >1GWN-A nrPDB Length = 205 Score = 57.4 bits (137), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 41/173 (23%), Positives = 78/173 (45%), Gaps = 27/173 (15%) Query: 11 KLLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYNAQGPNGSSGKAFKVHL 70 K++ +GDS GKT L+ + + F ++ TV ++ + ++ L Sbjct: 30 KIVVVGDSQCGKTALLHVFAKDCFPENYVPTVFENYTASFEI-----------DTQRIEL 78 Query: 71 QLWDTAGQERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNV-RNWMSQLQANAYCENPDIV 129 LWDT+G + ++ + D+ L+ FD++ ++ +V + W ++Q +C N ++ Sbjct: 79 SLWDTSGSPYYDNVRPLSYPDSDAVLICFDISRPETLDSVLKKWKGEIQ--EFCPNTKML 136 Query: 130 LIGNKADL------------PDQREVNERQARELADKYGIP-YFETSAATGQN 169 L+G K+DL Q V+ Q +A + G Y E SA +N Sbjct: 137 LVGCKSDLRTDVSTLVELSNHRQTPVSYDQGANMAKQIGAATYIECSALQSEN 189 >2CJW-A nrPDB Length = 192 Score = 57.0 bits (136), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 42/170 (24%), Positives = 82/170 (48%), Gaps = 12/170 (7%) Query: 11 KLLALGDSGVGKTTF--LYRYTDNKFNPKFITTVGIDFREKRVVYNAQGPNGSSGKAFKV 68 +++ +G+ GVGK+T ++ + + +G D E+ ++ + + A + Sbjct: 8 RVVLIGEQGVGKSTLANIFAGVHDSMDSD-CEVLGEDTYERTLMVDGES-------ATII 59 Query: 69 HLQLWDTAGQERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVRNWMSQLQANAYCENPDI 128 L +W+ G+ + DA +L+++ +T + SF QL+ E+ I Sbjct: 60 LLDMWENKGENEWLHDHCMQVGDA--YLIVYSITDRASFEKASELRIQLRRARQTEDIPI 117 Query: 129 VLIGNKADLPDQREVNERQARELADKYGIPYFETSAATGQNVEKAVETLL 178 +L+GNK+DL REV+ + R A + + ETSAA NV++ E ++ Sbjct: 118 ILVGNKSDLVRCREVSVSEGRACAVVFDCKFIETSAAVQHNVKELFEGIV 167 >1M7B-A nrPDB Length = 184 Score = 57.0 bits (136), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 41/173 (23%), Positives = 78/173 (45%), Gaps = 27/173 (15%) Query: 11 KLLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYNAQGPNGSSGKAFKVHL 70 K++ +GDS GKT L+ + + F ++ TV ++ + ++ L Sbjct: 9 KIVVVGDSQCGKTALLHVFAKDCFPENYVPTVFENYTASFEI-----------DTQRIEL 57 Query: 71 QLWDTAGQERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNV-RNWMSQLQANAYCENPDIV 129 LWDT+G + ++ + D+ L+ FD++ ++ +V + W ++Q +C N ++ Sbjct: 58 SLWDTSGSPYYDNVRPLSYPDSDAVLICFDISRPETLDSVLKKWKGEIQ--EFCPNTKML 115 Query: 130 LIGNKADL------------PDQREVNERQARELADKYGIP-YFETSAATGQN 169 L+G K+DL Q V+ Q +A + G Y E SA +N Sbjct: 116 LVGCKSDLRTDVSTLVELSNHRQTPVSYDQGANMAKQIGAATYIECSALQSEN 168 >5C1S-A nrPDB Length = 391 Score = 55.5 bits (132), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 41/172 (23%), Positives = 75/172 (43%), Gaps = 17/172 (9%) Query: 7 DYLIKLLALGDSGVGKTTFLYRYT-DNKFNPKFITTVGIDFREKRVVYNAQGPNGSSGKA 65 D I++L +GD VGKTTF+ ++ + F+ + F +++ Y Sbjct: 220 DIKIRMLMVGDQNVGKTTFIRKFALQDPTGHDFMNAITTRFEMEKIKYE----------- 268 Query: 66 FKVHLQLWDTAGQERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVRNWMSQLQANAYCEN 125 + + D + A R L+++D+T+++SF N+ L N + + Sbjct: 269 ----IIMIDWGFYNKLLQTNPAISRTIEAILIVYDITNEESFQNIHRKYYPLINNKFSDV 324 Query: 126 PDIVLIGNKADLPDQREVNERQARELADKYGIPYFETSAATGQNVEKAVETL 177 V++G K DL QR++ A LAD G Y E S+ ++ ++ L Sbjct: 325 AG-VIVGYKTDLEAQRKITMGDALTLADWLGYKYVEMSSKDTEDHSSIIKAL 375 Score = 53.1 bits (126), Expect = 8e-08, Method: Compositional matrix adjust. Identities = 52/182 (28%), Positives = 85/182 (46%), Gaps = 28/182 (15%) Query: 10 IKLLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYNAQGPNGSSGKAFKVH 69 I+LL +G SGVGKTT D F + G + REK V Q N + Sbjct: 63 IRLLVVGSSGVGKTTL----CDCFFESH--QSQGEETREKHV----QIDNDF------IR 106 Query: 70 LQLWDTAGQERFRSLTTAF-FRDAMGFLLMFDLTSQQSFLNVRN-WMSQLQANAYCE-NP 126 + + D AGQ+ F + + DA+ L+M+D+T +SF +++ W+ + YC + Sbjct: 107 ISISDIAGQQSFYACDNPYDGYDAI--LVMYDITELKSFTDLKTMWLPDI--FLYCNIDT 162 Query: 127 DIVLIGNKADLPDQREVNERQARELADKYGIPYFETSAATGQNVEKAVETLLDLIMKRME 186 I++IGNK D R + ++A + A ++E S + + + L D I + Sbjct: 163 QIIIIGNKKDQEIDRIITRKEAEQFAQDRLCQFYEISTK-----DDSCQLLFDCISRDFL 217 Query: 187 QC 188 QC Sbjct: 218 QC 219 >3D6T-B nrPDB Length = 171 Score = 54.3 bits (129), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 40/155 (25%), Positives = 79/155 (50%), Gaps = 15/155 (9%) Query: 10 IKLLALGDSGVGKTTFLYRYTDNKFNPKFI--TTVGIDFREKRVVYNAQGPNGSSGKAFK 67 +KL+ +G++G GKTT L + K + + TVGID ++ + + + Sbjct: 1 MKLMIVGNTGSGKTTLLQQLMKTKKSDLGMQSATVGIDVKDWPIQIRDK-------RKRD 53 Query: 68 VHLQLWDTAGQERFRSLTTAFFRDAMGFLLMFDLTSQQSFLN-VRNWMSQLQANAYCENP 126 + L +WD AG+E F S F +L ++DL+ Q+ ++ ++ W+ ++A A + Sbjct: 54 LVLNVWDFAGREEFYSTHPHFMTQRALYLAVYDLSKGQAEVDAMKPWLFNIKARA--SSS 111 Query: 127 DIVLIGNKADLPDQREVN---ERQARELADKYGIP 158 ++L+G D+ D+++ + +EL +K G P Sbjct: 112 PVILVGTHLDVSDEKQRKACMSKITKELLNKRGFP 146 >5UF8-A nrPDB Length = 181 Score = 52.4 bits (124), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 42/176 (23%), Positives = 72/176 (40%), Gaps = 28/176 (15%) Query: 10 IKLLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYNAQGPNGSSGKAFKVH 69 +++L +G GKTT LY+ K T I F + V Y + Sbjct: 18 MRILMVGLDAAGKTTILYKL---KLGEIVTTIPTIGFNVETVEYK------------NIS 62 Query: 70 LQLWDTAGQERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVRNWMSQLQANAYCENPDIV 129 +WD GQ++ R L +F++ G + + D + R + Q+ + ++ Sbjct: 63 FTVWDVGGQDKIRPLWRYYFQNTQGIIFVVDSNDRDRIAEAREELQQMLNEDELRDALLL 122 Query: 130 LIGNKADLPDQREVNERQARELADKYGI------PYF--ETSAATGQNVEKAVETL 177 + NK DLP N A E+ +K G+ P++ T A TG + + +E L Sbjct: 123 VFANKQDLP-----NAMNAAEITEKLGLHSIRQRPWYIQATCATTGDGLYEGLEWL 173 >2NZJ-A nrPDB Length = 175 Score = 52.4 bits (124), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 40/167 (23%), Positives = 74/167 (44%), Gaps = 9/167 (5%) Query: 9 LIKLLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYNAQGPNGSSGKAFKV 68 L +++ LGD GVGKT+ + K +G D E+ + + + V Sbjct: 4 LYRVVLLGDPGVGKTSLASLFA-GKQERDLHEQLGEDVYERTLTVDGEDTT-------LV 55 Query: 69 HLQLWDTAGQERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVRNWMSQLQANAYCENPDI 128 + W+ ++ S + + +++++ + + SF + QL+ ++ I Sbjct: 56 VVDTWEAEKLDKSWSQESCL-QGGSAYVIVYSIADRGSFESASELRIQLRRTHQADHVPI 114 Query: 129 VLIGNKADLPDQREVNERQARELADKYGIPYFETSAATGQNVEKAVE 175 +L+GNKADL REV+ + R A + + ETSA NV + E Sbjct: 115 ILVGNKADLARCREVSVEEGRACAVVFDCKFIETSATLQHNVAELFE 161 >3LVQ-E nrPDB Length = 497 Score = 52.4 bits (124), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 33/140 (23%), Positives = 57/140 (40%), Gaps = 15/140 (10%) Query: 10 IKLLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYNAQGPNGSSGKAFKVH 69 +++L LG GKTT LY+ K T + F + V Y V Sbjct: 323 MRILMLGLDAAGKTTILYKL---KLGQSVTTIPTVGFNVETVTYK------------NVK 367 Query: 70 LQLWDTAGQERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVRNWMSQLQANAYCENPDIV 129 +WD GQ++ R L ++ G + + D + R + ++ + + I+ Sbjct: 368 FNVWDVGGQDKIRPLWRHYYTGTQGLIFVVDCADRDRIDEARQELHRIINDREMRDAIIL 427 Query: 130 LIGNKADLPDQREVNERQAR 149 + NK DLPD + +E Q + Sbjct: 428 IFANKQDLPDAMKPHEIQEK 447 >3Q72-A nrPDB Length = 166 Score = 51.6 bits (122), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 43/174 (24%), Positives = 78/174 (44%), Gaps = 12/174 (6%) Query: 11 KLLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYNAQGPNGSSGKAFKVHL 70 K+L LG GVGK+ + + P+ G + ++ +V + + + L Sbjct: 4 KVLLLGAPGVGKSALARIFGGVEDGPE-AEAAGHTY-DRSIVVDGE----------EASL 51 Query: 71 QLWDTAGQERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVRNWMSQLQANAYCENPDIVL 130 ++D Q+ R L +++++ +T + SF QL+ ++ I+L Sbjct: 52 MVYDIWEQDGGRWLPGHCMAMGDAYVIVYSVTDKGSFEKASELRVQLRRARQTDDVPIIL 111 Query: 131 IGNKADLPDQREVNERQARELADKYGIPYFETSAATGQNVEKAVETLLDLIMKR 184 +GNK+DL REV+ + R A + + ETSAA NV+ E ++ I R Sbjct: 112 VGNKSDLVRSREVSVDEGRACAVVFDCKFIETSAALHHNVQALFEGVVRQIRLR 165 >1KSG-A nrPDB Length = 186 Score = 51.6 bits (122), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 46/181 (25%), Positives = 75/181 (41%), Gaps = 22/181 (12%) Query: 10 IKLLALGDSGVGKTTFLYRYTDNKFNPKFITTVG--IDFREKRVVYNAQGPNGSSGKAFK 67 ++LL LG GKTT L KFN + + T+ + F K + + + FK Sbjct: 19 LRLLMLGLDNAGKTTIL-----KKFNGEDVDTISPTLGFNIKTLEH----------RGFK 63 Query: 68 VHLQLWDTAGQERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVRNWMSQLQANAYCENPD 127 L +WD GQ+ RS +F G + + D +Q + + + L Sbjct: 64 --LNIWDVGGQKSLRSYWRNYFESTDGLIWVVDSADRQRMQDCQRELQSLLVEERLAGAT 121 Query: 128 IVLIGNKADLPDQREVNERQARELADKYGIPYFET---SAATGQNVEKAVETLLDLIMKR 184 +++ NK DLP N Q D ++ SA TG+++ ++ LLD I R Sbjct: 122 LLIFANKQDLPGALSCNAIQEALELDSIRSHHWRIQGCSAVTGEDLLPGIDWLLDDISSR 181 Query: 185 M 185 + Sbjct: 182 V 182 >3O47-A nrPDB Length = 329 Score = 51.6 bits (122), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 39/164 (23%), Positives = 67/164 (40%), Gaps = 27/164 (16%) Query: 10 IKLLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYNAQGPNGSSGKAFKVH 69 +++L +G GKTT LY+ K T I F + V Y + Sbjct: 166 MRILMVGLDAAGKTTILYKL---KLGEIVTTIPTIGFNVETVEYK------------NIS 210 Query: 70 LQLWDTAGQERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVRNWMSQLQANAYCENPDIV 129 +WD GQ++ R L +F++ G + + D ++ R + ++ A + ++ Sbjct: 211 FTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERVNEAREELMRMLAEDELRDAVLL 270 Query: 130 LIGNKADLPDQREVNERQARELADKYGIP-------YFETSAAT 166 + NK DLP N A E+ DK G+ Y + + AT Sbjct: 271 VFANKQDLP-----NAMNAAEITDKLGLHSLRHRNWYIQATCAT 309 >6FAE-B nrPDB Length = 213 Score = 51.6 bits (122), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 38/156 (24%), Positives = 65/156 (41%), Gaps = 20/156 (12%) Query: 2 TDGDYDYLIKLLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYNAQGPNGS 61 T+ Y +++L +G GKTT LY+ K T I F + V Y Sbjct: 42 TENLYFQSMRILMVGLDAAGKTTILYKL---KLGEIVTTIPTIGFNVETVEYK------- 91 Query: 62 SGKAFKVHLQLWDTAGQERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVRNWMSQLQANA 121 + +WD GQ++ R L +F++ G + + D ++ R + ++ A Sbjct: 92 -----NISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERVNEAREELMRMLAED 146 Query: 122 YCENPDIVLIGNKADLPDQREVNERQARELADKYGI 157 + +++ NK DLP N A E+ DK G+ Sbjct: 147 ELRDAVLLVFANKQDLP-----NAMNAAEITDKLGL 177 >3AQ4-A nrPDB Length = 184 Score = 51.6 bits (122), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 38/164 (23%), Positives = 68/164 (41%), Gaps = 27/164 (16%) Query: 10 IKLLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYNAQGPNGSSGKAFKVH 69 +++L +G GKTT LY+ K T I F + V Y + Sbjct: 21 MRILMVGLDAAGKTTILYKL---KLGEIVTTIPTIGFNVETVEYK------------NIS 65 Query: 70 LQLWDTAGQERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVRNWMSQLQANAYCENPDIV 129 +WD GQ++ R L +F++ G + + D + + R+ + ++ + ++ Sbjct: 66 FTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLL 125 Query: 130 LIGNKADLPDQREVNERQARELADKYGIP-------YFETSAAT 166 + NK DLP N A E+ DK G+ Y +++ AT Sbjct: 126 VFANKQDLP-----NAMNAAEITDKLGLHSLRQRHWYIQSTCAT 164 >2A5F-A nrPDB Length = 175 Score = 51.2 bits (121), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 33/140 (23%), Positives = 57/140 (40%), Gaps = 15/140 (10%) Query: 10 IKLLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYNAQGPNGSSGKAFKVH 69 +++L LG GKTT LY+ K T + F + V Y V Sbjct: 14 MRILMLGLDAAGKTTILYKL---KLGQSVTTIPTVGFNVETVTYK------------NVK 58 Query: 70 LQLWDTAGQERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVRNWMSQLQANAYCENPDIV 129 +WD GQ++ R L ++ G + + D + R + ++ + + I+ Sbjct: 59 FNVWDVGGQDKIRPLWRHYYTGTQGLIFVVDCADRDRIDEARQELHRIINDREMRDAIIL 118 Query: 130 LIGNKADLPDQREVNERQAR 149 + NK DLPD + +E Q + Sbjct: 119 IFANKQDLPDAMKPHEIQEK 138 >1Z6X-A nrPDB Length = 180 Score = 49.7 bits (117), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 42/183 (22%), Positives = 78/183 (42%), Gaps = 28/183 (15%) Query: 10 IKLLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYNAQGPNGSSGKAFKVH 69 +++L +G GKTT LY+ K T I F + V Y + Sbjct: 18 MRILMVGLDAAGKTTILYKL---KLGEIVTTIPTIGFNVETVEYK------------NIC 62 Query: 70 LQLWDTAGQERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVRNWMSQLQANAYCENPDIV 129 +WD GQ+R R L +F++ G + + D ++ V + + ++ + ++ Sbjct: 63 FTVWDVGGQDRIRPLWKHYFQNTQGLIFVVDSNDRERIQEVADELQKMLLVDELRDAVLL 122 Query: 130 LIGNKADLPDQREVNERQARELADKYGIP-------YFETSAAT-GQNVEKAVETLLDLI 181 L NK DLP+ ++ E+ DK G+ Y + + AT G + + ++ L + + Sbjct: 123 LFANKQDLPNAMAIS-----EMTDKLGLQSLRNRTWYVQATCATQGTGLYEGLDWLSNEL 177 Query: 182 MKR 184 KR Sbjct: 178 SKR 180 >1J2J-A nrPDB Length = 166 Score = 48.9 bits (115), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 38/164 (23%), Positives = 66/164 (40%), Gaps = 27/164 (16%) Query: 10 IKLLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYNAQGPNGSSGKAFKVH 69 +++L +G GKTT LY+ K T I F + V Y + Sbjct: 3 MRILMVGLDAAGKTTILYKL---KLGEIVTTIPTIGFNVETVEYK------------NIS 47 Query: 70 LQLWDTAGQERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVRNWMSQLQANAYCENPDIV 129 +WD G ++ R L +F++ G + + D ++ R + ++ A + ++ Sbjct: 48 FTVWDVGGLDKIRPLWRHYFQNTQGLIFVVDSNDRERVNEAREELMRMLAEDELRDAVLL 107 Query: 130 LIGNKADLPDQREVNERQARELADKYGIP-------YFETSAAT 166 + NK DLP N A E+ DK G+ Y + + AT Sbjct: 108 VFANKQDLP-----NAMNAAEITDKLGLHSLRHRNWYIQATCAT 146 >6DFF-C nrPDB Length = 193 Score = 48.9 bits (115), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 38/164 (23%), Positives = 66/164 (40%), Gaps = 27/164 (16%) Query: 10 IKLLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYNAQGPNGSSGKAFKVH 69 +++L +G GKTT LY+ K T I F + V Y + Sbjct: 30 MRILMVGLDAAGKTTILYKL---KLGEIVTTIPTIGFNVETVEYK------------NIS 74 Query: 70 LQLWDTAGQERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVRNWMSQLQANAYCENPDIV 129 +WD G ++ R L +F++ G + + D ++ R + ++ A + ++ Sbjct: 75 FTVWDVGGLDKIRPLWRHYFQNTQGLIFVVDSNDRERVNEAREELMRMLAEDELRDAVLL 134 Query: 130 LIGNKADLPDQREVNERQARELADKYGIP-------YFETSAAT 166 + NK DLP N A E+ DK G+ Y + + AT Sbjct: 135 VFANKQDLP-----NAMNAAEITDKLGLHSLRHRNWYIQATCAT 173 >6BBQ-A nrPDB Length = 520 Score = 48.5 bits (114), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 32/140 (22%), Positives = 56/140 (40%), Gaps = 15/140 (10%) Query: 10 IKLLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYNAQGPNGSSGKAFKVH 69 +++L LG GKTT LY+ K T + F + V Y V Sbjct: 360 MRILMLGLDAAGKTTILYKL---KLGQSVTTIPTVGFNVETVTYK------------NVK 404 Query: 70 LQLWDTAGQERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVRNWMSQLQANAYCENPDIV 129 +WD G ++ R L ++ G + + D + R + ++ + + I+ Sbjct: 405 FNVWDVGGLDKIRPLWRHYYTGTQGLIFVVDCADRDRIDEARQELHRIINDREMRDAIIL 464 Query: 130 LIGNKADLPDQREVNERQAR 149 + NK DLPD + +E Q + Sbjct: 465 IFANKQDLPDAMKPHEIQEK 484 >2REX-B nrPDB Length = 197 Score = 48.1 bits (113), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 33/134 (24%), Positives = 61/134 (45%), Gaps = 26/134 (19%) Query: 11 KLLALGDSGVGKTTFLYRYTDNKFNPKFITTV------GIDFREKRVVYNAQGPNGSSGK 64 KL+ +GD GKT L + + ++ TV ++ E+RV Sbjct: 12 KLVLVGDVQCGKTAMLQVLAKDCYPETYVPTVFENYTACLETEEQRV------------- 58 Query: 65 AFKVHLQLWDTAGQERFRSLTTAFFRDAMGFLLMFDLTSQQSFLN-VRNWMSQLQANAYC 123 L LWDT+G + ++ + D+ LL FD++ ++ + ++ W +++ YC Sbjct: 59 ----ELSLWDTSGSPYYDNVRPLCYSDSDAVLLCFDISRPETVDSALKKWRTEIL--DYC 112 Query: 124 ENPDIVLIGNKADL 137 + ++LIG K DL Sbjct: 113 PSTRVLLIGCKTDL 126 >2B6H-A nrPDB Length = 192 Score = 47.0 bits (110), Expect = 6e-06, Method: Compositional matrix adjust. Identities = 33/153 (21%), Positives = 64/153 (41%), Gaps = 20/153 (13%) Query: 10 IKLLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYNAQGPNGSSGKAFKVH 69 +++L +G GKTT LY+ K T I F + V Y + Sbjct: 30 MRILMVGLDAAGKTTILYKL---KLGEIVTTIPTIGFNVETVEYK------------NIC 74 Query: 70 LQLWDTAGQERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVRNWMSQLQANAYCENPDIV 129 +WD GQ++ R L +F++ G + + D ++ + + ++ + ++ Sbjct: 75 FTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERVQESADELQKMLQEDELRDAVLL 134 Query: 130 LIGNKADLPDQREVNERQARELADKYGIPYFET 162 + NK D+P+ V+ EL DK G+ + + Sbjct: 135 VFANKQDMPNAMPVS-----ELTDKLGLQHLRS 162 >1MOZ-A nrPDB Length = 183 Score = 44.7 bits (104), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 38/176 (21%), Positives = 68/176 (38%), Gaps = 20/176 (11%) Query: 10 IKLLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYNAQGPNGSSGKAFKVH 69 +++L LG G GKTT LYR + T I F + + Y + Sbjct: 19 LRILILGLDGAGKTTILYRL---QIGEVVTTKPTIGFNVETLSYK------------NLK 63 Query: 70 LQLWDTAGQERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVRNWMSQLQANAYCENPDIV 129 L +WD GQ R ++ D + + D T + + + ++ ++ Sbjct: 64 LNVWDLGGQTSIRPYWRCYYADTAAVIFVVDSTDKDRMSTASKELHLMLQEEELQDAALL 123 Query: 130 LIGNKADLPDQREVNERQAR----ELADKYGIPYFETSAATGQNVEKAVETLLDLI 181 + NK D P +E EL D+ +SA G+ + + ++ L+D+I Sbjct: 124 VFANKQDQPGALSASEVSKELNLVELKDR-SWSIVASSAIKGEGITEGLDWLIDVI 178 >4YLG-A nrPDB Length = 173 Score = 44.3 bits (103), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 38/178 (21%), Positives = 72/178 (40%), Gaps = 28/178 (15%) Query: 10 IKLLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYNAQGPNGSSGKAFKVH 69 +++L +G GKT+ LY+ K T I F + V Y + Sbjct: 14 MRILMVGLDAAGKTSILYKL---KLGEIVTTIPTIGFNVETVEYK------------NIS 58 Query: 70 LQLWDTAGQERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVRNWMSQLQANAYCENPDIV 129 +WD GQ++ R L ++++ + + D + R + ++ N ++ Sbjct: 59 FTVWDVGGQDKIRPLWRHYYQNTQAIIFVVDSNDRDRIGEAREELMKMLNEDEMRNAILL 118 Query: 130 LIGNKADLPDQREVNERQARELADKYGIP-------YFETSAAT-GQNVEKAVETLLD 179 + NK DLP ++ E+ +K G+ Y +TS AT G + + ++ L D Sbjct: 119 VFANKHDLPQAMSIS-----EVTEKLGLQTIKNRKWYCQTSCATNGDGLYEGLDWLAD 171 >3LRP-A nrPDB Length = 181 Score = 43.1 bits (100), Expect = 9e-05, Method: Compositional matrix adjust. Identities = 32/145 (22%), Positives = 60/145 (41%), Gaps = 20/145 (13%) Query: 10 IKLLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYNAQGPNGSSGKAFKVH 69 +++L +G GKTT LY+ K T I F + V + + Sbjct: 18 VRILMVGLDAAGKTTILYKV---KLGEVVTTIPTIGFNVETVEFR------------NIS 62 Query: 70 LQLWDTAGQERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVRNWMSQLQANAYCENPDIV 129 +WD GQ++ R L ++ + G + + D ++ + R + ++ ++ I+ Sbjct: 63 FTVWDVGGQDKIRPLWRHYYSNTDGLIFVVDSNDRERIDDAREELHRMINEEELKDAIIL 122 Query: 130 LIGNKADLPDQREVNERQARELADK 154 + NK DLP N A E+ +K Sbjct: 123 VFANKQDLP-----NAMSAAEVTEK 142 >3DPU-A nrPDB Length = 535 Score = 43.1 bits (100), Expect = 9e-05, Method: Compositional matrix adjust. Identities = 37/177 (20%), Positives = 69/177 (38%), Gaps = 15/177 (8%) Query: 10 IKLLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYNAQGPN----GSSGKA 65 IK+ +GD GKT+ L + F+PK T G++ V Q PN + + Sbjct: 42 IKVHLIGDGMAGKTSLLKQLIGETFDPKESQTHGLN------VVTKQAPNIKGLENDDEL 95 Query: 66 FKVHLQLWDTAGQERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVRNWMSQLQANAYCEN 125 + WD GQE + F + ++L+ D + N W+ ++ Y Sbjct: 96 KECLFHFWDFGGQEIMHASHQFFMTRSSVYMLLLDSRTDS---NKHYWLRHIE--KYGGK 150 Query: 126 PDIVLIGNKADLPDQREVNERQARELADKYGIPYFETSAATGQNVEKAVETLLDLIM 182 ++++ NK D + +++ E + S G VE ++L ++ Sbjct: 151 SPVIVVMNKIDENPSYNIEQKKINERFPAIENRFHRISCKNGDGVESIAKSLKSAVL 207 >5EE5-B nrPDB Length = 171 Score = 42.7 bits (99), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 40/184 (21%), Positives = 74/184 (40%), Gaps = 30/184 (16%) Query: 10 IKLLALGDSGVGKTTFLYRYTDNKFNPKFITTV-GIDFREKRVVYNAQGPNGSSGKAFKV 68 +++L LG G GKTT LYR + +TT+ I F + V Y + Sbjct: 8 MRILILGLDGAGKTTILYRLQVG----EVVTTIPTIGFNVETVTYK------------NL 51 Query: 69 HLQLWDTAGQERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVRNWMSQLQANAYCENPDI 128 Q+WD G R ++ + + + D + ++ + + + Sbjct: 52 KFQVWDLGGLTSIRPYWRCYYSNTDAVIYVVDSCDRDRIGISKSELVAMLEEEELRKAIL 111 Query: 129 VLIGNKADLPDQREVNERQARELADKYGIP--------YFETSAATGQNVEKAVETLLDL 180 V+ NK D+ + E+A+ G+P F+TSA G +++A+E L++ Sbjct: 112 VVFANKQDME-----QAMTSSEMANSLGLPALKDRKWQIFKTSATKGTGLDEAMEWLVET 166 Query: 181 IMKR 184 + R Sbjct: 167 LKSR 170 >3C5C-A nrPDB Length = 187 Score = 41.6 bits (96), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 39/157 (24%), Positives = 74/157 (47%), Gaps = 14/157 (8%) Query: 10 IKLLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYNAQGPNGSSGKAFKVH 69 + L LG G GK+ ++ +F ++ + + + V + VH Sbjct: 22 VNLAILGRRGAGKSALTVKFLTKRFISEYDPNLEDTYSSEETVDHQ-----------PVH 70 Query: 70 LQLWDTAGQERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVRNWMSQLQANAYCENPDI- 128 L++ DTA + R+ + A FL+++ + S+QSF + +++ L +A I Sbjct: 71 LRVMDTADLDTPRN-CERYLNWAHAFLVVYSVDSRQSFDSSSSYLELLALHAKETQRSIP 129 Query: 129 -VLIGNKADLPDQREVNERQARELADKYGIPYFETSA 164 +L+GNK D+ R+V + + LA ++G +FE SA Sbjct: 130 ALLLGNKLDMAQYRQVTKAEGVALAGRFGCLFFEVSA 166 >6HLU-A nrPDB Length = 974 Score = 41.6 bits (96), Expect = 3e-04, Method: Composition-based stats. Identities = 37/177 (20%), Positives = 69/177 (38%), Gaps = 15/177 (8%) Query: 10 IKLLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYNAQGPN----GSSGKA 65 IK+ +GD GKT+ L + F+PK T G++ V Q PN + + Sbjct: 481 IKVHLIGDGMAGKTSLLKQLIGETFDPKESQTHGLN------VVTKQAPNIKGLENDDEL 534 Query: 66 FKVHLQLWDTAGQERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVRNWMSQLQANAYCEN 125 + WD GQE + F + ++L+ D + N W+ ++ Y Sbjct: 535 KECLFHFWDFGGQEIMHASHQFFMTRSSVYMLLLDSRTDS---NKHYWLRHIE--KYGGK 589 Query: 126 PDIVLIGNKADLPDQREVNERQARELADKYGIPYFETSAATGQNVEKAVETLLDLIM 182 ++++ NK D + +++ E + S G VE ++L ++ Sbjct: 590 SPVIVVMNKIDENPSYNIEQKKINERFPAIENRFHRISCKNGDGVESIAKSLKSAVL 646 >1F6B-A nrPDB Length = 198 Score = 41.2 bits (95), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 39/181 (21%), Positives = 74/181 (40%), Gaps = 17/181 (9%) Query: 4 GDYDYLIKLLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYNAQGPNGSSG 63 G Y KL+ LG GKTT L+ D++ + + T+ E + +G Sbjct: 20 GLYKKTGKLVFLGLDNAGKTTLLHMLKDDRLG-QHVPTLHPTSEELTI----------AG 68 Query: 64 KAFKVHLQLWDTAGQERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVRNWMSQLQANAYC 123 F +D G + R + + G + + D + L + + L + Sbjct: 69 MTFTT----FDLGGHIQARRVWKNYLPAINGIVFLVDCADHERLLESKEELDSLMTDETI 124 Query: 124 ENPDIVLIGNKADLPDQREVNERQARELADKYGIPYFETSAATGQNVEKAVETLLDLIMK 183 N I+++GNK D P+ ++E + RE+ YG + S + + + +E + ++K Sbjct: 125 ANVPILILGNKIDRPEA--ISEERLREMFGLYGQTTGKGSVSLKELNARPLEVFMCSVLK 182 Query: 184 R 184 R Sbjct: 183 R 183 >4V0N-A nrPDB Length = 169 Score = 40.8 bits (94), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 40/172 (23%), Positives = 72/172 (41%), Gaps = 18/172 (10%) Query: 10 IKLLALGDSGVGKTTFLYRYTDN-KFNPKFITTVGIDFREKRVVYNAQGPNGSSGKAFKV 68 + +L +G GKTT + R + + TVG E +GP + Sbjct: 7 VNVLVVGLDNSGKTTIIERLKPRPRQAAEVAPTVGFTVDEVE-----KGP---------L 52 Query: 69 HLQLWDTAGQERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVRNWMSQLQANAYCENPDI 128 ++D +G R+R+L ++R+A + + D + + R+ M + ++ I Sbjct: 53 TFTVFDMSGAGRYRTLWEQYYREADAVVFVVDSADKLRMVVARDEMEHMLKHSNMRKVPI 112 Query: 129 VLIGNKADLP-DQREVNERQARELADKYGIPY--FETSAATGQNVEKAVETL 177 + NK DLP V QA L D P+ ++ TG+ V+K ++ L Sbjct: 113 LYFANKKDLPVAMPPVEIAQALGLDDIKDRPWQIVPSNGLTGEGVDKGIDWL 164 >2H16-A nrPDB Length = 183 Score = 38.9 bits (89), Expect = 0.002, Method: Compositional matrix adjust. Identities = 31/138 (22%), Positives = 60/138 (43%), Gaps = 21/138 (15%) Query: 11 KLLALGDSGVGKTTFLYRYTDNKF---NPKFITTVGIDFREKRVVYNAQGPNGSSGKAFK 67 K++ +G GKTT LY+++ N+ +P T+G + E +V N Sbjct: 24 KVIIVGLDNAGKTTILYQFSMNEVVHTSP----TIGSNVEE--IVIN------------N 65 Query: 68 VHLQLWDTAGQERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVRNWMSQLQANAYCENPD 127 +WD GQE RS ++ + +++ D T ++ R + ++ A+ Sbjct: 66 TRFLMWDIGGQESLRSSWNTYYTNTEFVIVVVDSTDRERISVTREELYKMLAHEDLRKAG 125 Query: 128 IVLIGNKADLPDQREVNE 145 +++ NK D+ + V E Sbjct: 126 LLIFANKQDVKECMTVAE 143 >1YZG-A nrPDB Length = 179 Score = 38.5 bits (88), Expect = 0.002, Method: Compositional matrix adjust. Identities = 30/130 (23%), Positives = 57/130 (43%), Gaps = 21/130 (16%) Query: 11 KLLALGDSGVGKTTFLYRYTDNKF---NPKFITTVGIDFREKRVVYNAQGPNGSSGKAFK 67 K++ +G GKTT LY++ N+ +P T+G + E+ VV N Sbjct: 18 KVIIVGLDNAGKTTILYQFLMNEVVHTSP----TIGSNV-EEIVVKNT------------ 60 Query: 68 VHLQLWDTAGQERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVRNWMSQLQANAYCENPD 127 H +WD GQE RS ++ + +L+ D ++ + + ++ A+ Sbjct: 61 -HFLMWDIGGQESLRSSWNTYYSNTEFIILVVDSIDRERLAITKEELYRMLAHEDLRKAA 119 Query: 128 IVLIGNKADL 137 +++ NK D+ Sbjct: 120 VLIFANKQDM 129 >3IHW-A nrPDB Length = 184 Score = 35.8 bits (81), Expect = 0.013, Method: Compositional matrix adjust. Identities = 44/158 (27%), Positives = 67/158 (42%), Gaps = 40/158 (25%) Query: 56 QGP--------NGSSGKAFKVHLQLWDTAGQE------RFR------------------- 82 QGP N SSGK+ VH L T QE RF+ Sbjct: 17 QGPELKVGIVGNLSSGKSALVHRYLTGTYVQEESPEGGRFKKEIVVDGQSYLLLIRDEGG 76 Query: 83 --SLTTAFFRDAMGFLLMFDLTSQQSFLNVRNWMSQLQANAYCENPDIVLIGNKADL--P 138 L A + DA+ F +F L + SF V N+ +L + +VL+G + + Sbjct: 77 PPELQFAAWVDAVVF--VFSLEDEISFQTVYNYFLRLCSFRNASEVPMVLVGTQDAISAA 134 Query: 139 DQREVNERQARELA-DKYGIPYFETSAATGQNVEKAVE 175 + R +++ +AR+L+ D Y+ET A G NVE+ + Sbjct: 135 NPRVIDDSRARKLSTDLKRCTYYETCATYGLNVERVFQ 172 >4WNR-A nrPDB Length = 349 Score = 35.0 bits (79), Expect = 0.025, Method: Compositional matrix adjust. Identities = 32/141 (22%), Positives = 59/141 (41%), Gaps = 15/141 (10%) Query: 10 IKLLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYNAQGPNGSSGKAFKVH 69 +K+L +GD GKT+ L R F+ T GI+ ++ G K ++ Sbjct: 42 VKVLLVGDGEAGKTSLLKRLLGEGFDGNEHQTQGINIKKW----------GFKDKDKEIK 91 Query: 70 LQLWDTAGQERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVRNWMSQLQANAYCENPDIV 129 + WD GQE + F ++L+ D + W+ +++ ++P +V Sbjct: 92 VNFWDFGGQEIMHATHQFFLSKRSLYILVLDSRRDEK---AEYWLKHIRSFG-GDSPVLV 147 Query: 130 LIGNKADLPDQREVNERQARE 150 + NK D E+N + +E Sbjct: 148 AL-NKIDENPSFELNRKFLQE 167 >2H57-A nrPDB Length = 190 Score = 35.0 bits (79), Expect = 0.026, Method: Compositional matrix adjust. Identities = 40/183 (21%), Positives = 78/183 (42%), Gaps = 30/183 (16%) Query: 10 IKLLALGDSGVGKTTFLYRYT-DNKFNPKFITTVGIDFREKRVVYNAQGPNGSSGKAFKV 68 + +L LG GKTT + + N + + T+G + + SS +F V Sbjct: 22 VHVLCLGLDNSGKTTIINKLKPSNAQSQNILPTIGFSIEKFK----------SSSLSFTV 71 Query: 69 HLQLWDTAGQERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVRNWMSQLQANAYCENPD- 127 +D +GQ R+R+L ++++ + + D + + +R +++ + + +PD Sbjct: 72 ----FDMSGQGRYRNLWEHYYKEGQAIIFVIDSSDR-----LRMVVAKEELDTLLNHPDI 122 Query: 128 ------IVLIGNKADLPDQ-REVNERQARELADKYGIPYF--ETSAATGQNVEKAVETLL 178 I+ NK DL D V Q L + P+ + A G+ +++ V+ L Sbjct: 123 KHRRIPILFFANKMDLRDAVTSVKVSQLLCLENIKDKPWHICASDAIKGEGLQEGVDWLQ 182 Query: 179 DLI 181 D I Sbjct: 183 DQI 185 >2X77-A nrPDB Length = 189 Score = 33.9 bits (76), Expect = 0.056, Method: Compositional matrix adjust. Identities = 36/181 (19%), Positives = 69/181 (38%), Gaps = 28/181 (15%) Query: 7 DYLIKLLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYNAQGPNGSSGKAF 66 D I++L LG GKT+ LYR + + G N + + Sbjct: 20 DRKIRVLMLGLDNAGKTSILYR---------------LHLGDVVTTVPTVGVNLETLQYK 64 Query: 67 KVHLQLWDTAGQERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVRNWMSQLQANAYCENP 126 + ++WD GQ R +F D + + D T + ++ + L Sbjct: 65 NISFEVWDLGGQTGVRPYWRCYFSDTDAVIYVVDSTDRDRMGVAKHELYALLDEDELRKS 124 Query: 127 DIVLIGNKADLPDQREVNERQARELADKYGIP--------YFETSAATGQNVEKAVETLL 178 +++ NK DLPD E+A++ G+ ++S+ TG + + ++ L+ Sbjct: 125 LLLIFANKQDLPDA-----ASEAEIAEQLGVSSIMNRTWTIVKSSSKTGDGLVEGMDWLV 179 Query: 179 D 179 + Sbjct: 180 E 180 >5BS3-B nrPDB Length = 692 Score = 33.5 bits (75), Expect = 0.074, Method: Compositional matrix adjust. Identities = 43/147 (29%), Positives = 55/147 (37%), Gaps = 32/147 (21%) Query: 1 MTDGDYD-YLIKLLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYNAQGPN 59 MTD D D I+ L L TF YR+ P E VY AQ P Sbjct: 98 MTDADVDGAHIRTLLL--------TFFYRF----MRPLI---------EAGYVYIAQPPT 136 Query: 60 GSSGKAFKVHLQLWDTAGQERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVRNWMSQLQA 119 G G QLW+T R+L DA+ F++ N R + ++ Sbjct: 137 GYKGLGEMNADQLWETTMNPEHRALLQVKLEDAIEADQTFEMLMGDVVENRRQF---IED 193 Query: 120 NAYCENPDIVLIGNKADLPDQREVNER 146 NA N D A+LP R +NER Sbjct: 194 NAVYANLDF------AELPQSR-INER 213 >6GNI-B nrPDB Length = 167 Score = 33.1 bits (74), Expect = 0.095, Method: Compositional matrix adjust. Identities = 31/139 (22%), Positives = 52/139 (37%), Gaps = 17/139 (12%) Query: 11 KLLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYNAQGPNGSSGKAFKVHL 70 KLL LG GKTT L+ +++ + P + Sbjct: 3 KLLFLGLDNAGKTTLLHMLKNDRL---------------ATLQPTWHPTSEELAIGNIKF 47 Query: 71 QLWDTAGQERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVRNWMSQLQANAYCENPDIVL 130 +D G + R L +F + G + + D + F R + L A ++ V+ Sbjct: 48 TTFDLGGHIQARRLWKDYFPEVNGIVFLVDAADPERFDEARVELDALFNIAELKDVPFVI 107 Query: 131 IGNKADLPDQREVNERQAR 149 +GNK D P+ V+E + R Sbjct: 108 LGNKIDAPNA--VSEAELR 124 >4M9Q-A nrPDB Length = 227 Score = 32.3 bits (72), Expect = 0.15, Method: Compositional matrix adjust. Identities = 27/132 (20%), Positives = 47/132 (35%), Gaps = 21/132 (15%) Query: 10 IKLLALGDSGVGKTTFLYRY---TDNKFNPKFITTVGIDFREKRVVYNAQGPNGSSGKAF 66 I + LG GKTT L D P F G N ++ Sbjct: 5 ITIALLGLDNAGKTTLLNSIQGEVDRDTTPTF------------------GFNSTTLNEG 46 Query: 67 KVHLQLWDTAGQERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVRNWMSQLQANAYCENP 126 K ++++D G + R + + + + + D F + M+++ N + + Sbjct: 47 KYKIEVFDLGGGKNIRGVWKKYLAEVHAIVYVVDAADPGRFEESKMTMAEVLENQFMRDK 106 Query: 127 DIVLIGNKADLP 138 I + NK DLP Sbjct: 107 PICIFANKQDLP 118 >5DI3-B nrPDB Length = 263 Score = 32.3 bits (72), Expect = 0.15, Method: Compositional matrix adjust. Identities = 27/132 (20%), Positives = 47/132 (35%), Gaps = 21/132 (15%) Query: 10 IKLLALGDSGVGKTTFLYRY---TDNKFNPKFITTVGIDFREKRVVYNAQGPNGSSGKAF 66 I + LG GKTT L D P F G N ++ Sbjct: 5 ITIALLGLDNAGKTTLLNSIQGEVDRDTTPTF------------------GFNSTTLNEG 46 Query: 67 KVHLQLWDTAGQERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVRNWMSQLQANAYCENP 126 K ++++D G + R + + + + + D F + M+++ N + + Sbjct: 47 KYKIEVFDLGGGKNIRGVWKKYLAEVHAIVYVVDAADPGRFEESKMTMAEVLENQFMRDK 106 Query: 127 DIVLIGNKADLP 138 I + NK DLP Sbjct: 107 PICIFANKQDLP 118 >6IAE-A nrPDB Length = 223 Score = 32.3 bits (72), Expect = 0.17, Method: Compositional matrix adjust. Identities = 30/103 (29%), Positives = 46/103 (44%), Gaps = 15/103 (14%) Query: 7 DYLIKLLALGDSGVGKTT---FLYRYTD------NKFNPKFITTVGIDFREKRVVYNAQG 57 D L+K+L LG S GK+T FL D ++ NP + V I + R G Sbjct: 7 DDLVKILVLGPSKSGKSTVTNFLAGTRDTPTKEYHETNPLRVLEVEIALDDTR----RSG 62 Query: 58 PNGSSGKAFKVHLQLWDTAGQERFRSLTTAFFRDAMGFLLMFD 100 + K K +QLWD G + ++ A +A G + +F+ Sbjct: 63 RQAAGLK--KAVVQLWDVGGSSKHQAGWPAIASNADGIIYVFN 103 >1U0L-A nrPDB Length = 301 Score = 32.3 bits (72), Expect = 0.18, Method: Compositional matrix adjust. Identities = 20/53 (37%), Positives = 31/53 (58%), Gaps = 4/53 (7%) Query: 127 DIVLIGNKADLPDQREVNERQARELADKYG--IPYFETSAATGQNVEKAVETL 177 + V++ NK DL D+ ++ R+ REL + Y P +TSA TG +E+ E L Sbjct: 117 ETVMVINKMDLYDEDDL--RKVRELEEIYSGLYPIVKTSAKTGMGIEELKEYL 167 >1M2O-B nrPDB Length = 190 Score = 32.0 bits (71), Expect = 0.19, Method: Compositional matrix adjust. Identities = 33/147 (22%), Positives = 53/147 (36%), Gaps = 16/147 (10%) Query: 11 KLLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYNAQGPNGSSGKAFKVHL 70 KLL LG GKTT L+ +++ + P + Sbjct: 25 KLLFLGLDNAGKTTLLHMLKNDRL---------------ATLQPTWHPTSEELAIGNIKF 69 Query: 71 QLWDTAGQERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVRNWMSQLQANAYCENPDIVL 130 +D G + R L +F + G + + D + F R + L A ++ V+ Sbjct: 70 TTFDLGGHIQARRLWKDYFPEVNGIVFLVDAADPERFDEARVELDALFNIAELKDVPFVI 129 Query: 131 IGNKADLPDQ-REVNERQARELADKYG 156 +GNK D P+ E R A L + G Sbjct: 130 LGNKIDAPNAVSEAELRSALGLLNTTG 156 >4ZI3-A nrPDB Length = 190 Score = 31.6 bits (70), Expect = 0.28, Method: Compositional matrix adjust. Identities = 22/101 (21%), Positives = 39/101 (38%), Gaps = 15/101 (14%) Query: 7 DYLIKLLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYNAQGPNGSSGKAF 66 D +++L LG GKTT L + + + QG N S ++ Sbjct: 15 DQEVRILLLGLDNAGKTTLLKQLASEDISH---------------ITPTQGFNIKSVQSQ 59 Query: 67 KVHLQLWDTAGQERFRSLTTAFFRDAMGFLLMFDLTSQQSF 107 L +WD GQ + R ++F + + + D ++ F Sbjct: 60 GFKLNVWDIGGQRKIRPYWRSYFENTDILIYVIDSADRKRF 100 >6CES-A nrPDB Length = 313 Score = 30.8 bits (68), Expect = 0.46, Method: Compositional matrix adjust. Identities = 42/169 (24%), Positives = 71/169 (42%), Gaps = 30/169 (17%) Query: 11 KLLALGDSGVGKTT---FLYRYTDNKFNPKFITTVGIDFREKRVVYNAQGPNGSSGKAFK 67 K+L +G SG GKT+ ++ + + T+ ++ R + N Sbjct: 9 KVLLMGKSGSGKTSMRSIIFANYIARDTRRLGATIDVEHSHVRFLGN------------- 55 Query: 68 VHLQLWDTAGQERFR-----SLTTAFFRDAMGFLLMFDLTSQQSFLNVRNWMSQLQANAY 122 + L LWD GQ+ F S FR+ + +FD+ S++ ++ + S L+A Sbjct: 56 LVLNLWDCGGQDTFMENYFTSQRDNIFRNVEVLIYVFDVESRELEKDMHYYQSCLEA-IL 114 Query: 123 CENPD--IVLIGNKADL--PDQREV----NERQARELADKYGIPYFETS 163 +PD I + +K DL DQR++ E R L+ F TS Sbjct: 115 QNSPDAKIFCLVHKMDLVQEDQRDLIFKEREEDLRRLSRPLECACFRTS 163 >6D4G-A nrPDB Length = 271 Score = 30.4 bits (67), Expect = 0.61, Method: Compositional matrix adjust. Identities = 30/96 (31%), Positives = 47/96 (48%), Gaps = 11/96 (11%) Query: 94 GFLLMFDLTSQQSFLNVRNWMSQLQ--ANAYCE----NPDIVLIGNKADLPDQREVNERQ 147 GFLL D++ + RN+ QL+ +N Y + IV++ K D +R + + Sbjct: 164 GFLLGIDVSRGMN----RNFDDQLKFVSNLYNQLAKTKKPIVIVLTKCDEGVERYIRDAH 219 Query: 148 ARELADKYGIPYFETSAATGQNVEKAVETLLDLIMK 183 L+ K + ETSA + NV+ A TL+ LI K Sbjct: 220 TFALSKK-NLQVVETSARSNVNVDLAFSTLVQLIDK 254 >3C5H-A nrPDB Length = 255 Score = 30.4 bits (67), Expect = 0.68, Method: Compositional matrix adjust. Identities = 30/96 (31%), Positives = 47/96 (48%), Gaps = 11/96 (11%) Query: 94 GFLLMFDLTSQQSFLNVRNWMSQLQ--ANAYCE----NPDIVLIGNKADLPDQREVNERQ 147 GFLL D++ + RN+ QL+ +N Y + IV++ K D +R + + Sbjct: 165 GFLLGIDVSRGMN----RNFDDQLKFVSNLYNQLAKTKKPIVVVLTKCDEGVERYIRDAH 220 Query: 148 ARELADKYGIPYFETSAATGQNVEKAVETLLDLIMK 183 L+ K + ETSA + NV+ A TL+ LI K Sbjct: 221 TFALSKK-NLQVVETSARSNVNVDLAFSTLVQLIDK 255 >5XXB-U nrPDB Length = 139 Score = 29.6 bits (65), Expect = 0.96, Method: Compositional matrix adjust. Identities = 23/70 (32%), Positives = 31/70 (44%), Gaps = 8/70 (11%) Query: 107 FLNVRNWMSQLQANAYCENPDIVLIGNKADLPDQRE-------VNERQARELADKYGIPY 159 + V+ W S L C D+VL K PD R+ V +R+A A+ Y I Y Sbjct: 38 IIAVKGWGSCLNRLPACSLGDLVLATVKKGKPDLRKKVHMAIIVRQRRAWRRAEGYFI-Y 96 Query: 160 FETSAATGQN 169 FE +A N Sbjct: 97 FEDNAGVVAN 106 >6HZK-A nrPDB Length = 333 Score = 29.3 bits (64), Expect = 1.3, Method: Compositional matrix adjust. Identities = 15/39 (38%), Positives = 23/39 (58%), Gaps = 1/39 (2%) Query: 7 DYLIKLLALGDSGVGKTTFLYRYTDNKFNPKFITTVGID 45 D ++ + GDSG GK+TFL R D F + +T + +D Sbjct: 5 DRVVLIGVAGDSGCGKSTFLNRLAD-LFGTELMTVICLD 42 >5IRR-A nrPDB Length = 308 Score = 29.3 bits (64), Expect = 1.3, Method: Compositional matrix adjust. Identities = 11/17 (64%), Positives = 15/17 (88%) Query: 10 IKLLALGDSGVGKTTFL 26 IKL+ +GDSG+GKTT + Sbjct: 27 IKLIVVGDSGLGKTTLI 43 >6G79-A nrPDB Length = 225 Score = 29.3 bits (64), Expect = 1.4, Method: Compositional matrix adjust. Identities = 17/70 (24%), Positives = 26/70 (37%) Query: 68 VHLQLWDTAGQERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVRNWMSQLQANAYCENPD 127 +H +L+D GQ R F D + DL+ + N + + Sbjct: 76 LHFRLFDVGGQRSERKKWIHCFEDVTAIIFCVDLSDYNRMHESLMLFDSICNNKFFIDTS 135 Query: 128 IVLIGNKADL 137 I+L NK DL Sbjct: 136 IILFLNKKDL 145 >5DE3-A nrPDB Length = 169 Score = 28.9 bits (63), Expect = 1.7, Method: Compositional matrix adjust. Identities = 28/127 (22%), Positives = 47/127 (37%), Gaps = 15/127 (11%) Query: 11 KLLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYNAQGPNGSSGKAFKVHL 70 ++L LG GKTT L ++ ITT+ QG N S +L Sbjct: 2 RILVLGLDNAGKTTILKALSEED-----ITTI----------TPTQGFNIKSLSRDGFNL 46 Query: 71 QLWDTAGQERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVRNWMSQLQANAYCENPDIVL 130 ++WD GQ+ R +F + + D + +++L +++ Sbjct: 47 KIWDIGGQKSIRPYWRNYFDQTDALIYVIDSADSKRLSESEFELTELLQEEKMTGVPLLV 106 Query: 131 IGNKADL 137 NK DL Sbjct: 107 FANKQDL 113 >3MCI-A nrPDB Length = 178 Score = 28.9 bits (63), Expect = 1.7, Method: Compositional matrix adjust. Identities = 21/80 (26%), Positives = 35/80 (43%), Gaps = 9/80 (11%) Query: 137 LPDQREVNERQARELADKYGIPYFETSAATG--------QNVEKAVETLLDLIMKRMEQC 188 +PD+R++ E+ ELAD+ G T+ TG + E E +L + M Q Sbjct: 49 IPDERDLIEKTLIELADEKGCSLILTTGGTGPAPRDVTPEATEAVCEKMLPGFGELMRQ- 107 Query: 189 VEKTQIPDTVNGGNSGNLDG 208 V Q+P + + + G Sbjct: 108 VSLKQVPTAILSRQTAGIRG 127 >4RIT-B nrPDB Length = 486 Score = 28.9 bits (63), Expect = 1.9, Method: Compositional matrix adjust. Identities = 10/30 (33%), Positives = 21/30 (70%) Query: 170 VEKAVETLLDLIMKRMEQCVEKTQIPDTVN 199 VE+ V+ ++DLI+ ++ E+ +P+TV+ Sbjct: 25 VERLVQQVVDLILAKLTGAAERPPMPETVD 54 >6GDG-D nrPDB Length = 248 Score = 28.5 bits (62), Expect = 2.0, Method: Compositional matrix adjust. Identities = 16/71 (22%), Positives = 26/71 (36%) Query: 67 KVHLQLWDTAGQERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVRNWMSQLQANAYCENP 126 KV+ ++D GQ R F D + + D + N + N + Sbjct: 80 KVNFHMFDVGGQRDERRKWIQCFNDVTAIIFVVDSSDYNRLQEALNLFKSIWNNRWLRTI 139 Query: 127 DIVLIGNKADL 137 ++L NK DL Sbjct: 140 SVILFLNKQDL 150 >4KV9-A nrPDB Length = 412 Score = 28.5 bits (62), Expect = 2.3, Method: Compositional matrix adjust. Identities = 19/70 (27%), Positives = 35/70 (50%), Gaps = 6/70 (8%) Query: 8 YLIKLLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYNAQGPNGSSGKAFK 67 ++ +L +G++G+GK+T L + KF+ T D + K V Y+ + N K Sbjct: 40 FVFNILCVGETGIGKSTLLETLFNQKFDFSPSTHDLTDPKLKAVTYDLKEAN------VK 93 Query: 68 VHLQLWDTAG 77 + L + +T G Sbjct: 94 LKLTVVETCG 103 >5IWM-B nrPDB Length = 202 Score = 28.1 bits (61), Expect = 2.9, Method: Compositional matrix adjust. Identities = 36/128 (28%), Positives = 46/128 (35%), Gaps = 25/128 (19%) Query: 1 MTDGDYD-YLIKLLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYNAQGPN 59 MTD D D I+ L L TF YR+ P E VY AQ P Sbjct: 98 MTDADVDGAHIRTLLL--------TFFYRF----MRPLI---------EAGYVYIAQPPT 136 Query: 60 GSSGKAFKVHLQLWDTAGQERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVRNWMSQLQA 119 G G QLW+T R+L DA+ F++ N R + ++ Sbjct: 137 GYKGLGEMNADQLWETTMNPEHRALLQVKLEDAIEADQTFEMLMGDVVENRRQF---IED 193 Query: 120 NAYCENPD 127 NA N D Sbjct: 194 NAVYANLD 201 >4C0K-A nrPDB Length = 423 Score = 28.1 bits (61), Expect = 2.9, Method: Compositional matrix adjust. Identities = 15/62 (24%), Positives = 35/62 (56%), Gaps = 5/62 (8%) Query: 97 LMFDLTSQQSFLNVRNWMSQLQANAYCENP-DIVLIGNKADLPDQREVNERQARELADKY 155 L++D ++ +SF +++++ Y E+ ++++G K D+ ++R+ Q E DKY Sbjct: 325 LVYDSSNPRSF----EYVARIYIKYYAESKIPVMIVGTKCDMDERRQDYLMQPSEFCDKY 380 Query: 156 GI 157 + Sbjct: 381 KL 382 >3BH6-A nrPDB Length = 164 Score = 27.7 bits (60), Expect = 3.7, Method: Compositional matrix adjust. Identities = 20/98 (20%), Positives = 37/98 (37%), Gaps = 15/98 (15%) Query: 10 IKLLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYNAQGPNGSSGKAFKVH 69 +++L LG GKTT L + + + QG N S ++ Sbjct: 5 VRILLLGLDNAGKTTLLKQLASEDISH---------------ITPTQGFNIKSVQSQGFK 49 Query: 70 LQLWDTAGQERFRSLTTAFFRDAMGFLLMFDLTSQQSF 107 L +WD G + R ++F + + + D ++ F Sbjct: 50 LNVWDIGGLRKIRPYWRSYFENTDILIYVIDSADRKRF 87 >1LNZ-A nrPDB Length = 342 Score = 27.7 bits (60), Expect = 3.9, Method: Compositional matrix adjust. Identities = 19/60 (31%), Positives = 28/60 (46%), Gaps = 4/60 (6%) Query: 107 FLNVRNWMSQLQANAYCENPDIVLIGNKADLPDQREVNERQARELADKYGIPYFETSAAT 166 +L + +S+ E P I+ + NK D+P+ E E +L D Y P F SA T Sbjct: 258 YLTINQELSEYNLR-LTERPQII-VANKMDMPEAAENLEAFKEKLTDDY--PVFPISAVT 313 >1CI0-A nrPDB Length = 228 Score = 27.7 bits (60), Expect = 4.0, Method: Compositional matrix adjust. Identities = 28/112 (25%), Positives = 46/112 (41%), Gaps = 16/112 (14%) Query: 96 LLMFDLTSQQSFLNVRNWMSQLQANAYCENPDIVLIGNKADLPDQREV---NERQARELA 152 +L+F + F NW + +A+ NP+ ++ DL Q V E RE + Sbjct: 74 ILLFKELDHRGFTIYSNWGTSRKAHDIATNPNAAIVFFWKDLQRQVRVEGITEHVNRETS 133 Query: 153 DKYGIPYFETS---------AATGQNVEKAVETLLDLIMKRMEQCVEKTQIP 195 ++ YF+T A+ +V K E L +L K E+ + IP Sbjct: 134 ER----YFKTRPRGSKIGAWASRQSDVIKNREELDELTQKNTERFKDAEDIP 181 >5HCI-A nrPDB Length = 261 Score = 26.9 bits (58), Expect = 6.3, Method: Compositional matrix adjust. Identities = 26/93 (27%), Positives = 41/93 (44%), Gaps = 23/93 (24%) Query: 9 LIKLLALGDSGVGKTTFLYRYTDN---KFNPKFITTV-----------GIDFRE----KR 50 L ++ +G +G GKTTF+ R + + P ++ + ID R+ K+ Sbjct: 2 LSTIICIGMAGSGKTTFMQRLNSHLRAEKTPPYVINLDPAVLRVPYGANIDIRDSIKYKK 61 Query: 51 VVYNAQ-GPNGSSGKAFKVHLQLWDTAGQERFR 82 V+ N Q GPNG A L L+ T + R Sbjct: 62 VMENYQLGPNG----AIVTSLNLFSTKIDQVIR 90 >2IWR-A nrPDB Length = 178 Score = 26.9 bits (58), Expect = 6.6, Method: Compositional matrix adjust. Identities = 38/168 (22%), Positives = 69/168 (41%), Gaps = 22/168 (13%) Query: 10 IKLLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYNAQGPNGSSGKAFKVH 69 ++L LGD+ GK++ ++R+ + + + + +K ++ + Q H Sbjct: 8 LRLGVLGDARSGKSSLIHRFLTGSY--QVLEKTESEQYKKEMLVDGQ-----------TH 54 Query: 70 LQLWDTAGQERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVRNWMSQLQA--NAYCENPD 127 L L +E + F A + +F L + SF V QL + Sbjct: 55 LVLI----REEAGAPDAKFSGWADAVIFVFSLEDENSFQAVSRLHGQLSSLRGEGRGGLA 110 Query: 128 IVLIG--NKADLPDQREVNERQAREL-ADKYGIPYFETSAATGQNVEK 172 + L+G ++ R V + +AR L AD Y+ET A G NV++ Sbjct: 111 LALVGTQDRISASSPRVVGDARARALCADMKRCSYYETCATYGLNVDR 158 >6MFM-A nrPDB Length = 313 Score = 26.9 bits (58), Expect = 7.4, Method: Compositional matrix adjust. Identities = 17/57 (29%), Positives = 30/57 (52%) Query: 138 PDQREVNERQARELADKYGIPYFETSAATGQNVEKAVETLLDLIMKRMEQCVEKTQI 194 P +++ E+Q + A G Y T QN EK ++ LD+ + + Q VE+T++ Sbjct: 237 PVLQQIEEQQRWQYALAGGDDYELCFTITPQNYEKLLQKQLDVKITMIGQIVEQTKL 293 >2AF3-C nrPDB Length = 333 Score = 26.6 bits (57), Expect = 8.6, Method: Compositional matrix adjust. Identities = 17/63 (26%), Positives = 31/63 (49%), Gaps = 8/63 (12%) Query: 127 DIVLIGNKADLP--------DQREVNERQARELADKYGIPYFETSAATGQNVEKAVETLL 178 DIVL+GN+AD+ + ++ + + E D+Y ++E G +E A E + Sbjct: 43 DIVLVGNEADIKALAGDLDLSKAKIVDPKTYEKKDEYINAFYELRKHKGITLENAAEIMS 102 Query: 179 DLI 181 D + Sbjct: 103 DYV 105 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: 2IEZ-A nrPDB 317 3e-87 2F7S-A nrPDB 297 2e-81 2IEY-A nrPDB 279 7e-76 3BC1-A nrPDB 266 4e-72 5SZH-B nrPDB 257 4e-69 6HUF-A nrPDB 248 2e-66 1ZBD-A nrPDB 245 1e-65 5SZJ-A nrPDB 244 3e-65 2RHD-A nrPDB 243 6e-65 5SZI-A nrPDB 242 7e-65 3L0I-B nrPDB 241 2e-64 3CPJ-B nrPDB 239 7e-64 4LHX-A nrPDB 237 2e-63 2F9L-A nrPDB 237 4e-63 5FBL-B nrPDB 236 6e-63 5LPN-A nrPDB 235 1e-62 2WWX-A nrPDB 235 2e-62 3CUE-F nrPDB 235 2e-62 2GF9-A nrPDB 230 4e-61 3DZ8-A nrPDB 230 4e-61 4RKF-A nrPDB 230 4e-61 4UJ4-A nrPDB 229 8e-61 1YZN-A nrPDB 228 1e-60 3RAB-A nrPDB 227 2e-60 6O62-A nrPDB 225 1e-59 6IF2-B nrPDB 224 2e-59 3CPH-A nrPDB 222 7e-59 2A5J-A nrPDB 222 1e-58 5UB8-A nrPDB 221 2e-58 1Z0A-A nrPDB 221 2e-58 5XR6-A nrPDB 218 1e-57 2OCY-C nrPDB 217 2e-57 2EW1-A nrPDB 217 3e-57 4RKE-A nrPDB 216 5e-57 2G6B-A nrPDB 216 6e-57 1Z0F-A nrPDB 216 6e-57 3TSO-A nrPDB 216 6e-57 3RWM-B nrPDB 215 2e-56 3BFK-A nrPDB 214 3e-56 2O52-A nrPDB 213 5e-56 1X3S-A nrPDB 212 1e-55 2BMD-A nrPDB 212 1e-55 2HUP-A nrPDB 208 1e-54 1TU4-A nrPDB 206 5e-54 2HEI-A nrPDB 206 6e-54 4QXA-A nrPDB 205 8e-54 4G01-B nrPDB 205 1e-53 1Z06-A nrPDB 203 5e-53 4KYI-B nrPDB 203 6e-53 2IL1-A nrPDB 203 6e-53 2G77-B nrPDB 200 3e-52 5CM8-B nrPDB 200 3e-52 1WMS-A nrPDB 200 4e-52 2FG5-A nrPDB 200 5e-52 6IYB-A nrPDB 199 7e-52 2FFQ-A nrPDB 199 9e-52 4KLZ-A nrPDB 198 2e-51 1D5C-A nrPDB 198 2e-51 2OCB-A nrPDB 198 2e-51 1YVD-A nrPDB 197 3e-51 5LDD-C nrPDB 196 7e-51 1EK0-A nrPDB 195 9e-51 1YZU-A nrPDB 195 9e-51 5LEF-A nrPDB 194 2e-50 2GIL-A nrPDB 194 3e-50 1ZC4-A nrPDB 193 6e-50 4PHF-A nrPDB 193 7e-50 4M8N-E nrPDB 192 1e-49 4CZ2-A nrPDB 191 2e-49 5YOZ-A nrPDB 190 3e-49 2P5S-A nrPDB 189 9e-49 2KE5-A nrPDB 188 2e-48 2WBL-C nrPDB 187 4e-48 3BWD-D nrPDB 187 5e-48 2J0V-A nrPDB 186 6e-48 4DXA-A nrPDB 186 7e-48 5C2K-A nrPDB 185 9e-48 2NTY-C nrPDB 185 1e-47 5ZHX-e nrPDB 184 3e-47 3RYT-C nrPDB 183 4e-47 3TH5-A nrPDB 183 5e-47 4KU4-A nrPDB 183 6e-47 1Z22-A nrPDB 182 8e-47 5JCP-B nrPDB 181 2e-46 2J1L-A nrPDB 181 3e-46 2ERX-A nrPDB 179 6e-46 4WA7-A nrPDB 179 7e-46 4U5X-A nrPDB 179 7e-46 2N1B-A nrPDB 178 1e-45 5WDR-A nrPDB 178 1e-45 2FV8-A nrPDB 178 1e-45 2ATX-A nrPDB 178 2e-45 5UWI-A nrPDB 178 2e-45 5CLL-A nrPDB 178 2e-45 2ERY-A nrPDB 177 4e-45 2WKQ-A nrPDB 177 5e-45 6FF8-A nrPDB 176 6e-45 5WDQ-A nrPDB 176 7e-45 3CON-A nrPDB 175 1e-44 2W2X-A nrPDB 175 1e-44 3CBQ-A nrPDB 175 2e-44 2FN4-A nrPDB 174 2e-44 5UHV-A nrPDB 174 3e-44 2CJW-A nrPDB 174 3e-44 2G3Y-A nrPDB 173 4e-44 4FMC-F nrPDB 173 7e-44 2ATV-A nrPDB 172 8e-44 3WYF-A nrPDB 172 8e-44 5XOJ-A nrPDB 172 9e-44 3A58-B nrPDB 172 1e-43 1RYH-A nrPDB 172 1e-43 5ZVP-A nrPDB 171 2e-43 5VCU-A nrPDB 170 3e-43 3CLV-A nrPDB 170 4e-43 3PIR-A nrPDB 167 3e-42 3E5H-A nrPDB 167 3e-42 3Q85-A nrPDB 166 4e-42 3OES-A nrPDB 166 6e-42 3VHL-B nrPDB 165 1e-41 2Q3H-A nrPDB 163 4e-41 2NZJ-A nrPDB 163 6e-41 3Q72-A nrPDB 163 6e-41 5XC3-A nrPDB 161 1e-40 4MIT-A nrPDB 161 1e-40 3T5G-A nrPDB 160 6e-40 3REG-A nrPDB 159 8e-40 3RAP-R nrPDB 159 9e-40 4DJT-A nrPDB 156 6e-39 1GWN-A nrPDB 149 9e-37 2GF0-A nrPDB 148 1e-36 1M7B-A nrPDB 148 2e-36 6FAE-B nrPDB 145 2e-35 2AL7-A nrPDB 144 3e-35 4ILE-A nrPDB 143 6e-35 1Z6X-A nrPDB 141 2e-34 3LVQ-E nrPDB 141 3e-34 2B6H-A nrPDB 140 5e-34 4YLG-A nrPDB 140 7e-34 3O47-A nrPDB 139 1e-33 5NZV-F nrPDB 139 1e-33 3AQ4-A nrPDB 137 4e-33 2A5F-A nrPDB 136 5e-33 5UF8-A nrPDB 136 5e-33 6DFF-C nrPDB 136 8e-33 3LRP-A nrPDB 135 1e-32 1J2J-A nrPDB 135 1e-32 6BBQ-A nrPDB 135 2e-32 5EE5-B nrPDB 133 7e-32 6HLU-A nrPDB 131 2e-31 3DPU-A nrPDB 130 5e-31 1MOZ-A nrPDB 130 7e-31 5HZH-A nrPDB 129 1e-30 2REX-B nrPDB 128 3e-30 2H16-A nrPDB 127 4e-30 2YC4-C nrPDB 126 6e-30 1KSG-A nrPDB 126 6e-30 5C1S-A nrPDB 126 7e-30 3C5C-A nrPDB 123 7e-29 4V0N-A nrPDB 115 2e-26 3D6T-B nrPDB 108 2e-24 1F6B-A nrPDB 108 2e-24 Sequences not found previously or not previously below threshold: 1YZG-A nrPDB 123 5e-29 2X77-A nrPDB 115 1e-26 5DE3-A nrPDB 110 4e-25 4ZI3-A nrPDB 109 8e-25 3BH6-A nrPDB 104 2e-23 2GAO-A nrPDB 103 7e-23 2H57-A nrPDB 102 1e-22 4WNR-A nrPDB 100 9e-22 1M2O-B nrPDB 95 2e-20 6GNI-B nrPDB 95 2e-20 4BAS-A nrPDB 89 2e-18 5DI3-B nrPDB 86 2e-17 4M9Q-A nrPDB 86 2e-17 3IHW-A nrPDB 85 3e-17 2IWR-A nrPDB 78 3e-15 6GDG-D nrPDB 70 9e-13 3T1O-A nrPDB 70 1e-12 6CES-A nrPDB 66 1e-11 4C0K-A nrPDB 65 3e-11 6G79-A nrPDB 62 2e-10 5YMX-A nrPDB 61 4e-10 6IAE-A nrPDB 61 4e-10 5J8B-z nrPDB 56 8e-09 5IMR-C nrPDB 56 9e-09 2GJ9-A nrPDB 56 1e-08 1XZP-A nrPDB 56 1e-08 2CXX-A nrPDB 55 2e-08 2GTP-A nrPDB 55 2e-08 4ARZ-A nrPDB 55 3e-08 3GEH-A nrPDB 53 7e-08 6D4G-A nrPDB 53 9e-08 3C5H-A nrPDB 53 1e-07 2E87-A nrPDB 53 1e-07 2LKD-A nrPDB 52 2e-07 1MKY-A nrPDB 52 2e-07 3CB4-D nrPDB 51 3e-07 4QJ3-A nrPDB 50 6e-07 3V00-C nrPDB 50 7e-07 2BCJ-Q nrPDB 50 8e-07 3K53-A nrPDB 50 9e-07 2ODE-A nrPDB 50 9e-07 1SHZ-A nrPDB 50 1e-06 2Q3F-A nrPDB 49 1e-06 5YT0-A nrPDB 49 2e-06 2DYK-A nrPDB 49 2e-06 3GEE-A nrPDB 49 2e-06 5KUT-A nrPDB 49 2e-06 5ZZM-A nrPDB 49 2e-06 5FG3-A nrPDB 49 2e-06 1WF3-A nrPDB 49 2e-06 5VAI-A nrPDB 49 2e-06 6OIJ-A nrPDB 48 2e-06 5DN8-A nrPDB 48 4e-06 5LAD-A nrPDB 47 5e-06 5X4B-A nrPDB 47 6e-06 4DCU-A nrPDB 47 6e-06 3A1W-A nrPDB 47 6e-06 3A1U-A nrPDB 46 9e-06 3PR1-A nrPDB 46 9e-06 3LLU-A nrPDB 46 1e-05 6D9H-A nrPDB 46 1e-05 6CES-C nrPDB 46 1e-05 5KSO-A nrPDB 46 1e-05 3IEU-A nrPDB 46 1e-05 6GB2-BC nrPDB 46 1e-05 3J8G-X nrPDB 46 2e-05 5KU1-A nrPDB 46 2e-05 2YWH-A nrPDB 46 2e-05 4FID-A nrPDB 44 4e-05 1TAG-A nrPDB 43 9e-05 5KH0-A nrPDB 43 9e-05 6OIK-A nrPDB 43 1e-04 2QAG-A nrPDB 43 1e-04 4UJC-AB nrPDB 43 1e-04 4TN1-B nrPDB 43 1e-04 4NCL-A nrPDB 42 2e-04 3T5D-A nrPDB 42 2e-04 4N3G-A nrPDB 42 2e-04 3FTQ-A nrPDB 42 2e-04 4WQY-BZ nrPDB 42 2e-04 2QAG-C nrPDB 42 2e-04 1LNZ-A nrPDB 41 3e-04 4V8Y-CP nrPDB 41 3e-04 1ZCA-A nrPDB 41 3e-04 3IZY-P nrPDB 41 4e-04 2XTZ-A nrPDB 41 4e-04 4NCF-A nrPDB 41 4e-04 3WBI-A nrPDB 41 5e-04 1G7S-A nrPDB 41 5e-04 4V8Z-CV nrPDB 40 6e-04 4V7F-o nrPDB 40 6e-04 3JB9-B nrPDB 40 8e-04 1ZUN-B nrPDB 39 0.001 1ZCB-A nrPDB 39 0.001 3R9W-A nrPDB 39 0.001 4KJZ-A nrPDB 39 0.002 4B44-A nrPDB 39 0.002 4ZKD-A nrPDB 39 0.002 4V89-AW nrPDB 39 0.002 3J4J-A nrPDB 38 0.002 5G06-P nrPDB 38 0.002 2QTH-A nrPDB 38 0.003 5IRR-A nrPDB 38 0.003 5CYO-A nrPDB 38 0.003 3W5J-A nrPDB 38 0.003 1U0L-A nrPDB 38 0.003 3EC1-A nrPDB 38 0.004 3H2Y-A nrPDB 37 0.005 5AR1-A nrPDB 37 0.006 2WJG-A nrPDB 37 0.006 4R98-A nrPDB 37 0.007 2WIC-A nrPDB 37 0.007 2OHF-A nrPDB 37 0.008 3P27-A nrPDB 36 0.010 5EE0-A nrPDB 36 0.011 3IZQ-1 nrPDB 36 0.013 6O81-S nrPDB 36 0.015 6FEC-S nrPDB 36 0.015 6HZK-A nrPDB 36 0.017 1S0U-A nrPDB 36 0.018 1ZO1-I nrPDB 35 0.019 1MJ1-A nrPDB 35 0.026 4Z54-A nrPDB 35 0.030 3JCN-b nrPDB 35 0.030 5A9Z-CA nrPDB 35 0.031 4V5G-AZ nrPDB 34 0.035 1JAL-A nrPDB 34 0.042 5H7J-A nrPDB 34 0.046 4KV9-A nrPDB 34 0.052 4V6W-Az nrPDB 34 0.052 5H7K-A nrPDB 34 0.053 2VNE-A nrPDB 34 0.054 5NON-A nrPDB 34 0.057 2WJI-A nrPDB 34 0.063 1YE8-A nrPDB 33 0.075 5LZT-jj nrPDB 33 0.080 3PEN-A nrPDB 33 0.083 2YV5-A nrPDB 33 0.090 5LZY-jj nrPDB 33 0.097 2P8Y-T nrPDB 33 0.11 2YYZ-A nrPDB 33 0.12 4D61-i nrPDB 33 0.13 6CS8-A nrPDB 33 0.14 1OXV-A nrPDB 32 0.16 6MTD-v nrPDB 32 0.17 1HEY-A nrPDB 32 0.17 1PUJ-A nrPDB 32 0.18 5W7Q-A nrPDB 32 0.18 5GAD-l nrPDB 32 0.19 5B3F-A nrPDB 32 0.20 2GZA-A nrPDB 32 0.21 5ANB-A nrPDB 32 0.21 3LX8-A nrPDB 32 0.24 5TY0-A nrPDB 32 0.25 4TLD-A nrPDB 31 0.28 4J0Q-A nrPDB 31 0.29 5TV2-A nrPDB 31 0.29 3S1A-A nrPDB 31 0.31 5IDV-A nrPDB 31 0.34 4XGC-D nrPDB 31 0.35 6NOT-A nrPDB 31 0.37 4AC9-A nrPDB 31 0.39 4U00-A nrPDB 31 0.40 6F1T-i nrPDB 31 0.41 2IYT-A nrPDB 31 0.45 6G12-A nrPDB 31 0.45 5ZLU-EE nrPDB 31 0.47 1R5O-A nrPDB 31 0.48 5C78-A nrPDB 31 0.49 2HDN-B nrPDB 31 0.50 1EFM-A nrPDB 31 0.50 2IT1-A nrPDB 31 0.51 3CNO-A nrPDB 31 0.52 1WDT-A nrPDB 31 0.53 4YMS-J nrPDB 31 0.53 6HCM-k1 nrPDB 31 0.54 3J81-k nrPDB 31 0.55 6C2V-A nrPDB 31 0.55 3JVU-A nrPDB 31 0.58 3FVQ-A nrPDB 30 0.60 3MMP-A nrPDB 30 0.64 1SUL-A nrPDB 30 0.64 6F1Y-j nrPDB 30 0.65 4FIN-A nrPDB 30 0.72 2P5T-B nrPDB 30 0.73 2D62-A nrPDB 30 0.79 2IW3-A nrPDB 30 0.85 2W6D-A nrPDB 30 0.87 5D4W-A nrPDB 30 0.88 3V9H-A nrPDB 30 0.92 4HI0-E nrPDB 30 0.98 2OUK-A nrPDB 30 1.00 4HZI-A nrPDB 29 1.0 4ZV4-A nrPDB 29 1.1 2QAG-B nrPDB 29 1.1 5W76-A nrPDB 29 1.1 4O0M-A nrPDB 29 1.2 5MKK-A nrPDB 29 1.2 1WXQ-A nrPDB 29 1.2 5OCH-A nrPDB 29 1.2 2PJZ-A nrPDB 29 1.2 3DEF-A nrPDB 29 1.3 1E94-E nrPDB 29 1.3 6N0I-A nrPDB 29 1.3 3LGZ-B nrPDB 29 1.3 3PXG-A nrPDB 29 1.4 3PXI-A nrPDB 29 1.5 2RGK-A nrPDB 29 1.5 3B5X-A nrPDB 29 1.6 2PX0-A nrPDB 29 1.6 6QUZ-B nrPDB 29 1.6 3PV0-A nrPDB 29 1.7 5OFO-C nrPDB 29 1.7 4YPL-A nrPDB 29 1.7 6EMW-E nrPDB 29 1.7 2QU8-A nrPDB 29 1.7 4MRS-A nrPDB 29 1.7 4CIU-A nrPDB 29 1.7 6ED3-A nrPDB 29 1.8 1QVR-A nrPDB 29 1.8 4RY2-A nrPDB 29 1.8 2P65-A nrPDB 29 1.8 6EM8-A nrPDB 29 1.8 4XGC-E nrPDB 29 1.8 1JBK-A nrPDB 29 1.8 2ZBL-A nrPDB 29 1.9 3TR5-A nrPDB 29 2.0 3ZJC-A nrPDB 29 2.0 1OFI-A nrPDB 29 2.0 1R6B-X nrPDB 29 2.0 4YPN-A nrPDB 29 2.1 5MRE-WW nrPDB 29 2.1 4AYX-A nrPDB 29 2.1 1IM2-A nrPDB 29 2.1 5IK2-D nrPDB 29 2.2 4N1A-A nrPDB 29 2.2 6FOC-D nrPDB 29 2.2 5JWO-A nrPDB 29 2.2 4HSE-A nrPDB 29 2.3 6H7G-A nrPDB 28 2.3 3GD7-A nrPDB 28 2.3 2GA8-A nrPDB 28 2.3 4Q7L-A nrPDB 28 2.4 2DBY-A nrPDB 28 2.4 6HA8-V nrPDB 28 2.5 5ZXD-A nrPDB 28 2.6 5B57-C nrPDB 28 2.6 1WTH-A nrPDB 28 2.7 2NQL-A nrPDB 28 2.7 3VAA-A nrPDB 28 2.8 4MYH-A nrPDB 28 2.9 5T5H-f nrPDB 28 2.9 3VX4-A nrPDB 28 2.9 6I3O-A nrPDB 28 3.1 5LKM-A nrPDB 28 3.1 1H65-A nrPDB 28 3.3 3KW7-A nrPDB 28 3.3 3VQT-A nrPDB 28 3.4 5FDN-A nrPDB 28 3.5 5DO7-A nrPDB 28 3.5 4XD7-D nrPDB 28 3.6 3GMT-A nrPDB 28 3.6 5JSZ-B nrPDB 28 3.7 3L43-A nrPDB 28 4.0 2AXV-A nrPDB 28 4.0 3J3U-A nrPDB 28 4.2 2W6I-D nrPDB 28 4.2 4NP6-A nrPDB 28 4.3 2AKA-B nrPDB 28 4.3 4UUD-B nrPDB 28 4.4 2XND-D nrPDB 28 4.6 2X2E-A nrPDB 28 4.6 5VHN-D nrPDB 28 4.6 4XJR-A nrPDB 28 4.6 2IVY-A nrPDB 28 4.7 3MKR-B nrPDB 28 4.8 6B8D-A nrPDB 28 5.0 1LVG-A nrPDB 28 5.0 5A3F-A nrPDB 27 5.3 5NIK-J nrPDB 27 5.3 5LJA-A nrPDB 27 5.3 5T0C-AD nrPDB 27 5.7 6DLV-b nrPDB 27 5.7 1PUI-A nrPDB 27 5.9 2PCL-A nrPDB 27 6.2 2DHR-A nrPDB 27 6.2 1IY1-A nrPDB 27 6.2 2YVU-A nrPDB 27 6.3 6QUZ-A nrPDB 27 6.4 6CY1-A nrPDB 27 6.4 3WBG-A nrPDB 27 6.5 1IRQ-A nrPDB 27 6.9 6AQ1-A nrPDB 27 7.6 5DGX-A nrPDB 27 7.7 6N8N-W nrPDB 27 8.3 5T62-W nrPDB 27 8.4 3KQ0-A nrPDB 26 8.7 5OWV-A nrPDB 26 8.7 2HF8-A nrPDB 26 8.7 4Q7K-A nrPDB 26 8.9 4LV5-B nrPDB 26 9.8 4ZPR-B nrPDB 26 10.0 >2IEZ-A nrPDB Length = 220 Score = 317 bits (812), Expect = 3e-87, Method: Composition-based stats. Identities = 205/218 (94%), Positives = 212/218 (97%) Query: 1 MTDGDYDYLIKLLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYNAQGPNG 60 MTDGDYDYLIKLLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVY+ QG +G Sbjct: 3 MTDGDYDYLIKLLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYDTQGADG 62 Query: 61 SSGKAFKVHLQLWDTAGQERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVRNWMSQLQAN 120 +SGKAFKVHLQLWDTAG ERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVRNWMSQLQAN Sbjct: 63 ASGKAFKVHLQLWDTAGLERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVRNWMSQLQAN 122 Query: 121 AYCENPDIVLIGNKADLPDQREVNERQARELADKYGIPYFETSAATGQNVEKAVETLLDL 180 AYCENPDIVLIGNKADLPDQREVNERQARELA+KYGIPYFETSAATGQNVEK+VETLLDL Sbjct: 123 AYCENPDIVLIGNKADLPDQREVNERQARELAEKYGIPYFETSAATGQNVEKSVETLLDL 182 Query: 181 IMKRMEQCVEKTQIPDTVNGGNSGNLDGEKPPEKKCIC 218 IMKRME+CVEKTQ+PDTVNGGNSG LDGEKP EKKC C Sbjct: 183 IMKRMEKCVEKTQVPDTVNGGNSGKLDGEKPAEKKCAC 220 >2F7S-A nrPDB Length = 217 Score = 297 bits (762), Expect = 2e-81, Method: Composition-based stats. Identities = 198/198 (100%), Positives = 198/198 (100%) Query: 4 GDYDYLIKLLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYNAQGPNGSSG 63 GDYDYLIKLLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYNAQGPNGSSG Sbjct: 20 GDYDYLIKLLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYNAQGPNGSSG 79 Query: 64 KAFKVHLQLWDTAGQERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVRNWMSQLQANAYC 123 KAFKVHLQLWDTAGQERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVRNWMSQLQANAYC Sbjct: 80 KAFKVHLQLWDTAGQERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVRNWMSQLQANAYC 139 Query: 124 ENPDIVLIGNKADLPDQREVNERQARELADKYGIPYFETSAATGQNVEKAVETLLDLIMK 183 ENPDIVLIGNKADLPDQREVNERQARELADKYGIPYFETSAATGQNVEKAVETLLDLIMK Sbjct: 140 ENPDIVLIGNKADLPDQREVNERQARELADKYGIPYFETSAATGQNVEKAVETLLDLIMK 199 Query: 184 RMEQCVEKTQIPDTVNGG 201 RMEQCVEKTQIPDTVNGG Sbjct: 200 RMEQCVEKTQIPDTVNGG 217 >2IEY-A nrPDB Length = 195 Score = 279 bits (714), Expect = 7e-76, Method: Composition-based stats. Identities = 184/193 (95%), Positives = 190/193 (98%) Query: 1 MTDGDYDYLIKLLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYNAQGPNG 60 MTDGDYDYLIKLLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVY+ QG +G Sbjct: 3 MTDGDYDYLIKLLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYDTQGADG 62 Query: 61 SSGKAFKVHLQLWDTAGQERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVRNWMSQLQAN 120 +SGKAFKVHLQLWDTAG ERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVRNWMSQLQAN Sbjct: 63 ASGKAFKVHLQLWDTAGLERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVRNWMSQLQAN 122 Query: 121 AYCENPDIVLIGNKADLPDQREVNERQARELADKYGIPYFETSAATGQNVEKAVETLLDL 180 AYCENPDIVLIGNKADLPDQREVNERQARELA+KYGIPYFETSAATGQNVEK+VETLLDL Sbjct: 123 AYCENPDIVLIGNKADLPDQREVNERQARELAEKYGIPYFETSAATGQNVEKSVETLLDL 182 Query: 181 IMKRMEQCVEKTQ 193 IMKRME+CVEKTQ Sbjct: 183 IMKRMEKCVEKTQ 195 >3BC1-A nrPDB Length = 195 Score = 266 bits (681), Expect = 4e-72, Method: Composition-based stats. Identities = 148/192 (77%), Positives = 169/192 (88%) Query: 1 MTDGDYDYLIKLLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYNAQGPNG 60 M+DGDYDYLIK LALGDSGVGKT+ LY+YTD KFN KFITTVGIDFREKRVVY A GP+G Sbjct: 3 MSDGDYDYLIKFLALGDSGVGKTSVLYQYTDGKFNSKFITTVGIDFREKRVVYRANGPDG 62 Query: 61 SSGKAFKVHLQLWDTAGQERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVRNWMSQLQAN 120 + G+ ++HLQLWDTAG ERFRSLTTAFFRDAMGFLL+FDLT++QSFLNVRNW+SQLQ + Sbjct: 63 AVGRGQRIHLQLWDTAGLERFRSLTTAFFRDAMGFLLLFDLTNEQSFLNVRNWISQLQMH 122 Query: 121 AYCENPDIVLIGNKADLPDQREVNERQARELADKYGIPYFETSAATGQNVEKAVETLLDL 180 AY ENPDIVL GNK+DL DQR V E +ARELA+KYGIPYFETSAA G N+ A+E LLDL Sbjct: 123 AYSENPDIVLCGNKSDLEDQRAVKEEEARELAEKYGIPYFETSAANGTNISHAIEMLLDL 182 Query: 181 IMKRMEQCVEKT 192 IMKRME+ V+K+ Sbjct: 183 IMKRMERSVDKS 194 >5SZH-B nrPDB Length = 203 Score = 257 bits (656), Expect = 4e-69, Method: Composition-based stats. Identities = 82/211 (38%), Positives = 129/211 (61%), Gaps = 19/211 (9%) Query: 5 DYDYLIKLLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYNAQGPNGSSGK 64 +YDYL KLL +GDSGVGK+ L R+ D+ + +I+T+G+DF+ + + + + Sbjct: 6 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGK-------- 57 Query: 65 AFKVHLQLWDTAGQERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVRNWMSQLQANAYCE 124 + LQ+WDTAGQERFR++T++++R A G ++++D+T Q+S+ NV+ W+ ++ A E Sbjct: 58 --TIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESYANVKQWLQEIDRYA-SE 114 Query: 125 NPDIVLIGNKADLPDQREVNERQARELADKYGIPYFETSAATGQNVEKAVETLLDLIMKR 184 N + +L+GNK+DL ++ V+ A+E AD GIP+ ETSA NVE+A T+ I KR Sbjct: 115 NVNKLLVGNKSDLTTKKVVDNTTAKEFADSLGIPFLETSAKNATNVEQAFMTMAAEIKKR 174 Query: 185 MEQCVEKTQIPDTVNGGNSGNLDGEKPPEKK 215 M P +GG NL + P K Sbjct: 175 MG--------PGAASGGERPNLKIDSTPVKP 197 >6HUF-A nrPDB Length = 182 Score = 248 bits (633), Expect = 2e-66, Method: Composition-based stats. Identities = 132/191 (69%), Positives = 157/191 (82%), Gaps = 10/191 (5%) Query: 2 TDGDYDYLIKLLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYNAQGPNGS 61 +DGDYDYLIK LALGDSGVGKT+ LY+YTD KFN KFITTVGIDFREK + N + Sbjct: 2 SDGDYDYLIKFLALGDSGVGKTSVLYQYTDGKFNSKFITTVGIDFREKTIYRNDK----- 56 Query: 62 SGKAFKVHLQLWDTAGQERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVRNWMSQLQANA 121 ++ LQLWDTAG ERFRSLTTAFFRDAMGFLL+FDLT+++SFLNVRNW+SQL+ +A Sbjct: 57 -----RIKLQLWDTAGLERFRSLTTAFFRDAMGFLLLFDLTNEESFLNVRNWISQLKTHA 111 Query: 122 YCENPDIVLIGNKADLPDQREVNERQARELADKYGIPYFETSAATGQNVEKAVETLLDLI 181 Y ENPDIVL GNK+DL D+R V +AR+LA+ YGIPYFETSAA G N+ +A+E LLDLI Sbjct: 112 YSENPDIVLCGNKSDLEDERVVAAAEARQLAEHYGIPYFETSAANGTNISQAIEMLLDLI 171 Query: 182 MKRMEQCVEKT 192 MKRME+ V+K+ Sbjct: 172 MKRMERSVDKS 182 >1ZBD-A nrPDB Length = 203 Score = 245 bits (625), Expect = 1e-65, Method: Composition-based stats. Identities = 86/211 (40%), Positives = 141/211 (66%), Gaps = 15/211 (7%) Query: 6 YDYLIKLLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYNAQGPNGSSGKA 65 +DY+ K+L +G+S VGKT+FL+RY D+ F P F++TVGIDF+ K + N + Sbjct: 5 FDYMFKILIIGNSSVGKTSFLFRYADDSFTPAFVSTVGIDFKVKTIYRNDK--------- 55 Query: 66 FKVHLQLWDTAGQERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVRNWMSQLQANAYCEN 125 ++ LQ+WDTAG ER+R++TTA++R AMGF+LM+D+T+++SF V++W +Q++ ++ +N Sbjct: 56 -RIKLQIWDTAGLERYRTITTAYYRGAMGFILMYDITNEESFNAVQDWSTQIKTYSW-DN 113 Query: 126 PDIVLIGNKADLPDQREVNERQARELADKYGIPYFETSAATGQNVEKAVETLLDLIMKRM 185 ++L+GNK D+ D+R V+ + R+LAD G +FE SA NV++ E L+D+I ++M Sbjct: 114 AQVLLVGNKCDMEDERVVSSERGRQLADHLGFEFFEASAKDNINVKQTFERLVDVICEKM 173 Query: 186 EQCVEKTQIPDTVNGGNSGN--LDGEKPPEK 214 + ++ T P V G G D + PP + Sbjct: 174 SESLD-TADP-AVTGAKQGPQLTDQQAPPHQ 202 >5SZJ-A nrPDB Length = 202 Score = 244 bits (622), Expect = 3e-65, Method: Composition-based stats. Identities = 82/201 (40%), Positives = 129/201 (64%), Gaps = 11/201 (5%) Query: 1 MTDGDYDYLIKLLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYNAQGPNG 60 M YD L KLL +GDSGVGKT L+R++D+ FN FI+T+GIDF+ K V + Sbjct: 3 MAKKTYDLLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGK---- 58 Query: 61 SSGKAFKVHLQLWDTAGQERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVRNWMSQLQAN 120 K+ LQ+WDTAGQERF ++TT+++R AMG +L++D+T+ +SF N+ W+ + + Sbjct: 59 ------KIKLQIWDTAGQERFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNIDEH 112 Query: 121 AYCENPDIVLIGNKADLPDQREVNERQARELADKYGIPYFETSAATGQNVEKAVETLLDL 180 A E+ + +L+GNK D+ D+R V + + ++A ++GI +FETSA N+EKA TL + Sbjct: 113 AN-EDVERMLLGNKCDMDDKRVVPKGKGEQIAREHGIRFFETSAKANINIEKAFLTLAED 171 Query: 181 IMKRMEQCVEKTQIPDTVNGG 201 I+++ ++ D +GG Sbjct: 172 ILRKTPVKEPNSENVDISSGG 192 >2RHD-A nrPDB Length = 175 Score = 243 bits (620), Expect = 6e-65, Method: Composition-based stats. Identities = 76/182 (41%), Positives = 118/182 (64%), Gaps = 11/182 (6%) Query: 5 DYDYLIKLLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYNAQGPNGSSGK 64 +YDYL KLL +GDSGVGK+ L R+ D+ + +I+T+G+DF+ + + + Sbjct: 5 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTDSYISTIGVDFKIRTISLENK-------- 56 Query: 65 AFKVHLQLWDTAGQERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVRNWMSQLQANAYCE 124 V LQ+WDTAGQERFR++T++++R A G ++++D+T + SF NV+ W+ ++ A E Sbjct: 57 --TVKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDRDSFDNVKQWIQEIDRYA-ME 113 Query: 125 NPDIVLIGNKADLPDQREVNERQARELADKYGIPYFETSAATGQNVEKAVETLLDLIMKR 184 N + +L+GNK DL +R V + RELAD +GI + ETSA NVE+A T+ I KR Sbjct: 114 NVNKLLVGNKCDLVSKRVVTSDEGRELADSHGIKFIETSAKNAYNVEQAFHTMAGEIKKR 173 Query: 185 ME 186 ++ Sbjct: 174 VQ 175 >5SZI-A nrPDB Length = 209 Score = 242 bits (619), Expect = 7e-65, Method: Composition-based stats. Identities = 85/205 (41%), Positives = 135/205 (65%), Gaps = 12/205 (5%) Query: 6 YDYLIKLLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYNAQGPNGSSGKA 65 YDYL KLL +GDSGVGKT L+R++++ FN FI+T+GIDF+ + + + + Sbjct: 7 YDYLFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGK--------- 57 Query: 66 FKVHLQLWDTAGQERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVRNWMSQLQANAYCEN 125 ++ LQ+WDTAGQERFR++TTA++R AMG +L++D+T+++SF N+RNW+ ++ +A + Sbjct: 58 -RIKLQIWDTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIRNWIRNIEEHASA-D 115 Query: 126 PDIVLIGNKADLPDQREVNERQARELADKYGIPYFETSAATGQNVEKAVETLLDLIMKRM 185 + +++GNK D+ D+R+V++ + +LA YGI + ETSA NVE A TL I +M Sbjct: 116 VEKMILGNKCDVNDKRQVSKERGEKLALDYGIKFMETSAKANINVENAFFTLARDIKAKM 175 Query: 186 EQCVEKTQIPDTVNGGNSGNLDGEK 210 ++ +E P N G D +K Sbjct: 176 DKKLEGNS-PQGSNQGVKITPDQQK 199 >3L0I-B nrPDB Length = 199 Score = 241 bits (616), Expect = 2e-64, Method: Composition-based stats. Identities = 75/181 (41%), Positives = 119/181 (65%), Gaps = 11/181 (6%) Query: 5 DYDYLIKLLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYNAQGPNGSSGK 64 +YDYL KLL +GDSGVGK+ L R+ D+ + +I+T+G+DF+ + + + + Sbjct: 29 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGK-------- 80 Query: 65 AFKVHLQLWDTAGQERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVRNWMSQLQANAYCE 124 + LQ+WDTAGQERFR++T++++R A G ++++D+T Q+SF NV+ W+ ++ A E Sbjct: 81 --TIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYA-SE 137 Query: 125 NPDIVLIGNKADLPDQREVNERQARELADKYGIPYFETSAATGQNVEKAVETLLDLIMKR 184 N + +L+GNK DL ++ V+ A+E AD GIP+ ETSA NVE++ T+ I KR Sbjct: 138 NVNKLLVGNKCDLTTKKVVDYTTAKEFADSLGIPFLETSAKNATNVEQSFMTMAAEIKKR 197 Query: 185 M 185 M Sbjct: 198 M 198 >3CPJ-B nrPDB Length = 223 Score = 239 bits (610), Expect = 7e-64, Method: Composition-based stats. Identities = 76/213 (35%), Positives = 128/213 (60%), Gaps = 16/213 (7%) Query: 5 DYDYLIKLLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYNAQGPNGSSGK 64 DYD L K++ +GDSGVGK+ L R+T N+FN +T+G++F + + + Sbjct: 9 DYDLLFKIVLIGDSGVGKSNLLSRFTKNEFNMDSKSTIGVEFATRTLEIEGK-------- 60 Query: 65 AFKVHLQLWDTAGQERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVRNWMSQLQANAYCE 124 ++ Q+WDTAGQER+R++T+A++R A+G L+++D++ S+ N +W+S+L+ NA + Sbjct: 61 --RIKAQIWDTAGQERYRAITSAYYRGAVGALIVYDISKSSSYENCNHWLSELRENAD-D 117 Query: 125 NPDIVLIGNKADLPDQREVNERQARELADKYGIPYFETSAATGQNVEKAVETLLDLIMKR 184 N + LIGNK+DL R V +++ A + + + ETSA +NV+KA E L++ I ++ Sbjct: 118 NVAVGLIGNKSDLAHLRAVPTEESKTFAQENQLLFTETSALNSENVDKAFEELINTIYQK 177 Query: 185 MEQCVEKTQIPDTVNGGNSGNLDGEKPPEKKCI 217 V K Q+ D + +GN +G P I Sbjct: 178 ----VSKHQM-DLGDSSANGNANGASAPNGPTI 205 >4LHX-A nrPDB Length = 186 Score = 237 bits (606), Expect = 2e-63, Method: Composition-based stats. Identities = 80/188 (42%), Positives = 129/188 (68%), Gaps = 11/188 (5%) Query: 6 YDYLIKLLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYNAQGPNGSSGKA 65 YDYL KLL +GDSGVGKT L+R++++ FN FI+T+GIDF+ + + + + Sbjct: 7 YDYLFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGK--------- 57 Query: 66 FKVHLQLWDTAGQERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVRNWMSQLQANAYCEN 125 ++ LQ+WDTAGQERFR++TTA++R AMG +L++D+T+++SF N+RNW+ ++ +A + Sbjct: 58 -RIKLQIWDTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIRNWIRNIEEHASA-D 115 Query: 126 PDIVLIGNKADLPDQREVNERQARELADKYGIPYFETSAATGQNVEKAVETLLDLIMKRM 185 + +++GNK D+ D+R+V++ + +LA YGI + ETSA NVE A TL I +M Sbjct: 116 VEKMILGNKCDVNDKRQVSKERGEKLALDYGIKFMETSAKANINVENAFFTLARDIKAKM 175 Query: 186 EQCVEKTQ 193 ++ +E Sbjct: 176 DKKLEGNS 183 >2F9L-A nrPDB Length = 199 Score = 237 bits (604), Expect = 4e-63, Method: Composition-based stats. Identities = 76/210 (36%), Positives = 121/210 (57%), Gaps = 18/210 (8%) Query: 6 YDYLIKLLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYNAQGPNGSSGKA 65 YDYL K++ +GDSGVGK+ L R+T N+FN + +T+G++F + + + + Sbjct: 2 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGK--------- 52 Query: 66 FKVHLQLWDTAGQERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVRNWMSQLQANAYCEN 125 + Q+WDTAGQER+R +T+A++R A+G LL++D+ ++ NV W+ +L+ +A N Sbjct: 53 -TIKAQIWDTAGQERYRRITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADS-N 110 Query: 126 PDIVLIGNKADLPDQREVNERQARELADKYGIPYFETSAATGQNVEKAVETLLDLIMKRM 185 I+L+GNK+DL R V +AR A+K + + ETSA NVE+A + +L I + Sbjct: 111 IVIMLVGNKSDLRHLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYR-- 168 Query: 186 EQCVEKTQIPDTVNGGNSGN---LDGEKPP 212 V + QI D S +D PP Sbjct: 169 --IVSQKQIADRAAHDESPGNNVVDISVPP 196 >5FBL-B nrPDB Length = 221 Score = 236 bits (602), Expect = 6e-63, Method: Composition-based stats. Identities = 76/220 (34%), Positives = 127/220 (57%), Gaps = 17/220 (7%) Query: 3 DGDYDYLIKLLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYNAQGPNGSS 62 D +YDYL K++ +GDSGVGK+ L R+T N+FN + +T+G++F + + + + Sbjct: 10 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGK------ 63 Query: 63 GKAFKVHLQLWDTAGQERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVRNWMSQLQANAY 122 + Q+WDTAGQER+R++T+A++R A+G LL++D+ ++ NV W+ +L+ +A Sbjct: 64 ----TIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHAD 119 Query: 123 CENPDIVLIGNKADLPDQREVNERQARELADKYGIPYFETSAATGQNVEKAVETLLDLIM 182 N I+L+GNK+DL R V +AR A+K G+ + ETSA NVE A +T+L I Sbjct: 120 S-NIVIMLVGNKSDLRHLRAVPTDEARAFAEKNGLSFIETSALDSTNVEAAFQTILTEIY 178 Query: 183 KRMEQCVEKTQIPDTVNGGNS------GNLDGEKPPEKKC 216 + + Q + + ++ N+ KP + C Sbjct: 179 RIVSQKQMSDRRENDMSPSNNVVPIHVPPTTENKPKVQCC 218 >5LPN-A nrPDB Length = 177 Score = 235 bits (599), Expect = 1e-62, Method: Composition-based stats. Identities = 79/184 (42%), Positives = 123/184 (66%), Gaps = 11/184 (5%) Query: 1 MTDGDYDYLIKLLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYNAQGPNG 60 M YD L KLL +GDSGVGKT L+R++D+ FN FI+T+GIDF+ K V + Sbjct: 3 MAKKTYDLLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGK---- 58 Query: 61 SSGKAFKVHLQLWDTAGQERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVRNWMSQLQAN 120 K+ LQ+WDTAGQERF ++TT+++R AMG +L++D+T+ +SF N+ W+ + + Sbjct: 59 ------KIKLQIWDTAGQERFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNIDEH 112 Query: 121 AYCENPDIVLIGNKADLPDQREVNERQARELADKYGIPYFETSAATGQNVEKAVETLLDL 180 A E+ + +L+GNK D+ D+R V + + ++A ++GI +FETSA N+EKA TL + Sbjct: 113 AN-EDVERMLLGNKCDMDDKRVVPKGKGEQIAREHGIRFFETSAKANINIEKAFLTLAED 171 Query: 181 IMKR 184 I+++ Sbjct: 172 ILRK 175 >2WWX-A nrPDB Length = 175 Score = 235 bits (599), Expect = 2e-62, Method: Composition-based stats. Identities = 74/181 (40%), Positives = 118/181 (65%), Gaps = 11/181 (6%) Query: 5 DYDYLIKLLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYNAQGPNGSSGK 64 +YDYL KLL +GDSGVGK+ L R+ D+ + +I+T+G+DF+ + + + + Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGK-------- 55 Query: 65 AFKVHLQLWDTAGQERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVRNWMSQLQANAYCE 124 + LQ+WDTAGQERFR++T++++R A G ++++D+T Q+SF NV+ W+ ++ A E Sbjct: 56 --TIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYA-SE 112 Query: 125 NPDIVLIGNKADLPDQREVNERQARELADKYGIPYFETSAATGQNVEKAVETLLDLIMKR 184 N + +L+G K DL ++ V+ A+E AD GIP+ ETSA NVE++ T+ I KR Sbjct: 113 NVNKLLVGIKCDLTTKKVVDYTTAKEFADSLGIPFLETSAKNATNVEQSFMTMAAEIKKR 172 Query: 185 M 185 M Sbjct: 173 M 173 >3CUE-F nrPDB Length = 206 Score = 235 bits (599), Expect = 2e-62, Method: Composition-based stats. Identities = 79/216 (36%), Positives = 123/216 (56%), Gaps = 12/216 (5%) Query: 3 DGDYDYLIKLLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYNAQGPNGSS 62 + +YDYL KLL +G+SGVGK+ L R++D+ + +I+T+G+DF+ K V + + Sbjct: 2 NSEYDYLFKLLLIGNSGVGKSCLLLRFSDDTYTNDYISTIGVDFKIKTVELDGK------ 55 Query: 63 GKAFKVHLQLWDTAGQERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVRNWMSQLQANAY 122 V LQ+WDTAGQERFR++T++++R + G ++++D+T Q+SF V+ W+ ++ A Sbjct: 56 ----TVKLQIWDTAGQERFRTITSSYYRGSHGIIIVYDVTDQESFNGVKMWLQEIDRYAT 111 Query: 123 CENPDIVLIGNKADLPDQREVNERQARELADKYGIPYFETSAATGQNVEKAVETLLDLIM 182 +L+GNK DL D+R V A+E AD +P+ ETSA NVE A T+ I Sbjct: 112 ST-VLKLLVGNKCDLKDKRVVEYDVAKEFADANKMPFLETSALDSTNVEDAFLTMARQIK 170 Query: 183 KRMEQCVEKTQIPDTVNGGNSGNLDGEKPPEKKCIC 218 + M Q + GN NL G+ C Sbjct: 171 ESMSQQNLNETTQKKEDKGN-VNLKGQSLTNTGGGC 205 >2GF9-A nrPDB Length = 189 Score = 230 bits (587), Expect = 4e-61, Method: Composition-based stats. Identities = 82/181 (45%), Positives = 125/181 (69%), Gaps = 11/181 (6%) Query: 7 DYLIKLLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYNAQGPNGSSGKAF 66 DY+ KLL +G+S VGKT+FL+RY D+ F P F++TVGIDF+ K V + + Sbjct: 20 DYMFKLLLIGNSSVGKTSFLFRYADDSFTPAFVSTVGIDFKVKTVYRHDK---------- 69 Query: 67 KVHLQLWDTAGQERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVRNWMSQLQANAYCENP 126 ++ LQ+WDTAGQER+R++TTA++R AMGFLLM+D+ +Q+SF V++W +Q++ ++ +N Sbjct: 70 RIKLQIWDTAGQERYRTITTAYYRGAMGFLLMYDIANQESFAAVQDWATQIKTYSW-DNA 128 Query: 127 DIVLIGNKADLPDQREVNERQARELADKYGIPYFETSAATGQNVEKAVETLLDLIMKRME 186 ++L+GNK DL D+R V R LAD G +FE SA NV++ E L+D+I ++M Sbjct: 129 QVILVGNKCDLEDERVVPAEDGRRLADDLGFEFFEASAKENINVKQVFERLVDVICEKMN 188 Query: 187 Q 187 + Sbjct: 189 E 189 >3DZ8-A nrPDB Length = 191 Score = 230 bits (587), Expect = 4e-61, Method: Composition-based stats. Identities = 79/186 (42%), Positives = 128/186 (68%), Gaps = 11/186 (5%) Query: 3 DGDYDYLIKLLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYNAQGPNGSS 62 G++DY+ KLL +G+S VGKT+FL+RY D+ F P F++TVGIDF+ K V + + Sbjct: 17 QGNFDYMFKLLIIGNSSVGKTSFLFRYADDTFTPAFVSTVGIDFKVKTVYRHEK------ 70 Query: 63 GKAFKVHLQLWDTAGQERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVRNWMSQLQANAY 122 +V LQ+WDTAGQER+R++TTA++R AMGF+LM+D+T+++SF V++W +Q++ ++ Sbjct: 71 ----RVKLQIWDTAGQERYRTITTAYYRGAMGFILMYDITNEESFNAVQDWATQIKTYSW 126 Query: 123 CENPDIVLIGNKADLPDQREVNERQARELADKYGIPYFETSAATGQNVEKAVETLLDLIM 182 +N ++L+GNK D+ ++R V + + LA++ G +FE SA +V +A E L+D I Sbjct: 127 -DNAQVILVGNKCDMEEERVVPTEKGQLLAEQLGFDFFEASAKENISVRQAFERLVDAIC 185 Query: 183 KRMEQC 188 +M Sbjct: 186 DKMSDS 191 >4RKF-A nrPDB Length = 190 Score = 230 bits (586), Expect = 4e-61, Method: Composition-based stats. Identities = 81/186 (43%), Positives = 132/186 (70%), Gaps = 11/186 (5%) Query: 2 TDGDYDYLIKLLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYNAQGPNGS 61 D ++DY+ KLL +G+S VGKT+FL+RY D+ F F++TVGIDF+ K V + + Sbjct: 16 ADQNFDYMFKLLIIGNSSVGKTSFLFRYADDSFTSAFVSTVGIDFKVKTVFRHDK----- 70 Query: 62 SGKAFKVHLQLWDTAGQERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVRNWMSQLQANA 121 +V LQ+WDTAG ER+R++TTA++R AMGF+LM+D+T++ SF +V++W++Q++ + Sbjct: 71 -----RVKLQIWDTAGLERYRTITTAYYRGAMGFILMYDVTNEDSFNSVQDWVTQIKTYS 125 Query: 122 YCENPDIVLIGNKADLPDQREVNERQARELADKYGIPYFETSAATGQNVEKAVETLLDLI 181 + +N ++L+GNK D+ DQR ++ + R+LAD+ G+ +FETSA NV+ E L+D+I Sbjct: 126 W-DNAQVILVGNKCDMEDQRVISFERGRQLADQLGVEFFETSAKENVNVKAVFERLVDII 184 Query: 182 MKRMEQ 187 +M + Sbjct: 185 CDKMSE 190 >4UJ4-A nrPDB Length = 185 Score = 229 bits (584), Expect = 8e-61, Method: Composition-based stats. Identities = 71/186 (38%), Positives = 116/186 (62%), Gaps = 11/186 (5%) Query: 3 DGDYDYLIKLLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYNAQGPNGSS 62 D +YDYL K++ +GDSGVGK+ L R+T N+FN + +T+G++F + + + + Sbjct: 4 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGK------ 57 Query: 63 GKAFKVHLQLWDTAGQERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVRNWMSQLQANAY 122 + Q+WDTAG ER+R++T+A++R A+G LL++D+ ++ NV W+ +L+ +A Sbjct: 58 ----TIKAQIWDTAGLERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHAD 113 Query: 123 CENPDIVLIGNKADLPDQREVNERQARELADKYGIPYFETSAATGQNVEKAVETLLDLIM 182 N I+L+GNK+DL R V +AR A+K G+ + ETSA NVE A +T+L I Sbjct: 114 S-NIVIMLVGNKSDLRHLRAVPTDEARAFAEKNGLSFIETSALDSTNVEAAFQTILTEIY 172 Query: 183 KRMEQC 188 + + Q Sbjct: 173 RIVSQK 178 >1YZN-A nrPDB Length = 185 Score = 228 bits (582), Expect = 1e-60, Method: Composition-based stats. Identities = 71/179 (39%), Positives = 112/179 (62%), Gaps = 11/179 (6%) Query: 5 DYDYLIKLLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYNAQGPNGSSGK 64 +YDYL KLL +G+SGVGK+ L R++D+ + +I+T+G+DF+ K V + + Sbjct: 17 EYDYLFKLLLIGNSGVGKSCLLLRFSDDTYTNDYISTIGVDFKIKTVELDGK-------- 68 Query: 65 AFKVHLQLWDTAGQERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVRNWMSQLQANAYCE 124 V LQ+WDTAGQERFR++T++++R + G ++++D+T Q+SF V+ W+ ++ A Sbjct: 69 --TVKLQIWDTAGQERFRTITSSYYRGSHGIIIVYDVTDQESFNGVKMWLQEIDRYATST 126 Query: 125 NPDIVLIGNKADLPDQREVNERQARELADKYGIPYFETSAATGQNVEKAVETLLDLIMK 183 +L+GNK DL D+R V A+E AD +P+ ETSA NVE A T+ I + Sbjct: 127 -VLKLLVGNKCDLKDKRVVEYDVAKEFADANKMPFLETSALDSTNVEDAFLTMARQIKE 184 >3RAB-A nrPDB Length = 169 Score = 227 bits (580), Expect = 2e-60, Method: Composition-based stats. Identities = 78/180 (43%), Positives = 129/180 (71%), Gaps = 11/180 (6%) Query: 5 DYDYLIKLLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYNAQGPNGSSGK 64 ++DY+ K+L +G+S VGKT+FL+RY D+ F P F++TVGIDF+ K + N + Sbjct: 1 NFDYMFKILIIGNSSVGKTSFLFRYADDSFTPAFVSTVGIDFKVKTIYRNDK-------- 52 Query: 65 AFKVHLQLWDTAGQERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVRNWMSQLQANAYCE 124 ++ LQ+WDTAGQER+R++TTA++R AMGF+LM+D+T+++SF V++W +Q++ ++ + Sbjct: 53 --RIKLQIWDTAGQERYRTITTAYYRGAMGFILMYDITNEESFNAVQDWSTQIKTYSW-D 109 Query: 125 NPDIVLIGNKADLPDQREVNERQARELADKYGIPYFETSAATGQNVEKAVETLLDLIMKR 184 N ++L+GNK D+ D+R V+ + R+LAD G +FE SA NV++ E L+D+I ++ Sbjct: 110 NAQVLLVGNKCDMEDERVVSSERGRQLADHLGFEFFEASAKDNINVKQTFERLVDVICEK 169 >6O62-A nrPDB Length = 184 Score = 225 bits (574), Expect = 1e-59, Method: Composition-based stats. Identities = 77/179 (43%), Positives = 117/179 (65%), Gaps = 11/179 (6%) Query: 6 YDYLIKLLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYNAQGPNGSSGKA 65 YD ++KLL +GDSGVGK+ L R+ ++KFNP FITT+GIDF+ + + + Sbjct: 11 YDMIMKLLLVGDSGVGKSCLLLRFVEDKFNPSFITTIGIDFKIRTIESKGK--------- 61 Query: 66 FKVHLQLWDTAGQERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVRNWMSQLQANAYCEN 125 ++ LQ+WDTAGQERFR++TTA++R AMG +L++D+T +SF NV NW + +A E+ Sbjct: 62 -RIKLQVWDTAGQERFRTITTAYYRGAMGIVLIYDVTDSRSFENVENWFQTVTQHAN-ED 119 Query: 126 PDIVLIGNKADLPDQREVNERQARELADKYGIPYFETSAATGQNVEKAVETLLDLIMKR 184 I L+GNK D R+V++ Q +ELA K +P+ E SA + +NV+ L +I ++ Sbjct: 120 AQIFLVGNKCDDEVNRQVSKEQGQELAAKLNVPFLEASAKSNENVDSIFYELASIIQEK 178 >6IF2-B nrPDB Length = 186 Score = 224 bits (572), Expect = 2e-59, Method: Composition-based stats. Identities = 75/189 (39%), Positives = 121/189 (64%), Gaps = 12/189 (6%) Query: 5 DYDYLIKLLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYNAQGPNGSSGK 64 DYD+L KLL +GDSGVGK++ L R+ DN F+ +ITT+G+DF+ + V N + Sbjct: 10 DYDHLFKLLIIGDSGVGKSSLLLRFADNTFSGSYITTIGVDFKIRTVEINGE-------- 61 Query: 65 AFKVHLQLWDTAGQERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVRNWMSQLQANAYCE 124 KV LQ+WDTAG ERFR++T+ ++R G ++++D+TS +SF+NV+ W+ ++ N C+ Sbjct: 62 --KVKLQIWDTAGLERFRTITSTYYRGTHGVIVVYDVTSAESFVNVKRWLHEI--NQNCD 117 Query: 125 NPDIVLIGNKADLPDQREVNERQARELADKYGIPYFETSAATGQNVEKAVETLLDLIMKR 184 + +L+GNK D P+++ V A + A + GI FETSA NVE+ + +L+++ Sbjct: 118 DVCRILVGNKNDDPERKVVETEDAYKFAGQMGIQLFETSAKENVNVEEMFNCITELVLRA 177 Query: 185 MEQCVEKTQ 193 + + K Q Sbjct: 178 KKDNLAKQQ 186 >3CPH-A nrPDB Length = 213 Score = 222 bits (567), Expect = 7e-59, Method: Composition-based stats. Identities = 80/184 (43%), Positives = 119/184 (64%), Gaps = 12/184 (6%) Query: 5 DYDYLIKLLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYNAQGPNGSSGK 64 YD ++K+L +GDSGVGK+ L R+ ++KFNP FITT+GIDF+ K V N + Sbjct: 16 SYDSIMKILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGK-------- 67 Query: 65 AFKVHLQLWDTAGQERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVRNWMSQLQANAYCE 124 KV LQLWDTAGQERFR++TTA++R AMG +L++D+T +++F N++ W + +A E Sbjct: 68 --KVKLQLWDTAGQERFRTITTAYYRGAMGIILVYDVTDERTFTNIKQWFKTVNEHANDE 125 Query: 125 NPDIVLIGNKADLPDQREVNERQARELADKYGIPYFETSAATGQNVEKAVETLLDLIMKR 184 ++L+GNK+D+ R V Q LA + GIP+ E+SA NV + TL LI ++ Sbjct: 126 -AQLLLVGNKSDMET-RVVTADQGEALAKELGIPFIESSAKNDDNVNEIFFTLAKLIQEK 183 Query: 185 MEQC 188 ++ Sbjct: 184 IDSN 187 >2A5J-A nrPDB Length = 191 Score = 222 bits (566), Expect = 1e-58, Method: Composition-based stats. Identities = 64/180 (35%), Positives = 111/180 (61%), Gaps = 11/180 (6%) Query: 8 YLIKLLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYNAQGPNGSSGKAFK 67 YL K + +GD+GVGK+ L ++TD +F P T+G++F + V + + + Sbjct: 20 YLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVNIDGK----------Q 69 Query: 68 VHLQLWDTAGQERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVRNWMSQLQANAYCENPD 127 + LQ+WDTAGQE FRS+T +++R A G LL++D+T +++F ++ +W+ + ++ N Sbjct: 70 IKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLTSWLEDARQHS-SSNMV 128 Query: 128 IVLIGNKADLPDQREVNERQARELADKYGIPYFETSAATGQNVEKAVETLLDLIMKRMEQ 187 I+LIGNK+DL +R+V + A ++G+ + ETSA T NVE+A I ++++Q Sbjct: 129 IMLIGNKSDLESRRDVKREEGEAFAREHGLIFMETSAKTACNVEEAFINTAKEIYRKIQQ 188 >5UB8-A nrPDB Length = 222 Score = 221 bits (563), Expect = 2e-58, Method: Composition-based stats. Identities = 66/211 (31%), Positives = 120/211 (56%), Gaps = 11/211 (5%) Query: 5 DYDYLIKLLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYNAQGPNGSSGK 64 DY+YL K++ +GDSGVGK+ L R+T ++FN + +T+G++F + + + + Sbjct: 11 DYEYLYKIVLIGDSGVGKSNLLSRFTRDEFNLESRSTIGVEFATRTLEIDGK-------- 62 Query: 65 AFKVHLQLWDTAGQERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVRNWMSQLQANAYCE 124 +V Q+WDTAGQER+R++T+A++R A+G L+++D+ +S+ +V W+ +L+ +A Sbjct: 63 --RVKAQIWDTAGQERYRAITSAYYRGAVGALIVYDIAKTESYESVSRWLKELKEHADA- 119 Query: 125 NPDIVLIGNKADLPDQREVNERQARELADKYGIPYFETSAATGQNVEKAVETLLDLIMKR 184 N I L+GNK+DL R V +A+ A + + + E SA + NV+ + LL I + Sbjct: 120 NIIIELVGNKSDLDHLRAVPTEEAKNFAMENNLLFTEASALSSDNVDLSFHQLLKNIYEM 179 Query: 185 MEQCVEKTQIPDTVNGGNSGNLDGEKPPEKK 215 + + + N + P++K Sbjct: 180 ISKHQLENNDSKQTNTAGGPTISLTPAPQEK 210 >1Z0A-A nrPDB Length = 174 Score = 221 bits (563), Expect = 2e-58, Method: Composition-based stats. Identities = 64/179 (35%), Positives = 108/179 (60%), Gaps = 11/179 (6%) Query: 6 YDYLIKLLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYNAQGPNGSSGKA 65 Y YL K + +GD+GVGK+ L ++TD +F P T+G++F + + + + Sbjct: 7 YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGK--------- 57 Query: 66 FKVHLQLWDTAGQERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVRNWMSQLQANAYCEN 125 ++ LQ+WDTAGQE FRS+T +++R A G LL++D+T + +F ++ W+ + ++ N Sbjct: 58 -QIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLTTWLEDARQHSNS-N 115 Query: 126 PDIVLIGNKADLPDQREVNERQARELADKYGIPYFETSAATGQNVEKAVETLLDLIMKR 184 I+LIGNK+DL +REV + + A ++G+ + ETSA T NVE+A I ++ Sbjct: 116 MVIMLIGNKSDLESRREVKKEEGEAFAREHGLIFMETSAKTASNVEEAFINTAKEIYEK 174 >5XR6-A nrPDB Length = 194 Score = 218 bits (556), Expect = 1e-57, Method: Composition-based stats. Identities = 69/182 (37%), Positives = 107/182 (58%), Gaps = 11/182 (6%) Query: 6 YDYLIKLLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYNAQGPNGSSGKA 65 YDYL KL+ +GDSGVGK+ L R+T N+FN + +T+G++F K + Sbjct: 22 YDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATKTTKVEGKV-------- 73 Query: 66 FKVHLQLWDTAGQERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVRNWMSQLQANAYCEN 125 V Q+WDTAGQER+R++T+A++R A+G LL++D+T +F N W+ +L+ + N Sbjct: 74 --VKAQIWDTAGQERYRAITSAYYRGAVGALLIYDVTRHATFENAARWLRELRGHTD-PN 130 Query: 126 PDIVLIGNKADLPDQREVNERQARELADKYGIPYFETSAATGQNVEKAVETLLDLIMKRM 185 ++LIGNK DL V +A+ A++ + + ETSA NVE A +L I K + Sbjct: 131 IVVMLIGNKCDLRHLVAVKTEEAKAFAERESLYFMETSALDATNVENAFTEVLTQIHKIV 190 Query: 186 EQ 187 + Sbjct: 191 SK 192 >2OCY-C nrPDB Length = 170 Score = 217 bits (554), Expect = 2e-57, Method: Composition-based stats. Identities = 79/182 (43%), Positives = 118/182 (64%), Gaps = 12/182 (6%) Query: 7 DYLIKLLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYNAQGPNGSSGKAF 66 D ++K+L +GDSGVGK+ L R+ ++KFNP FITT+GIDF+ K V N + Sbjct: 1 DSIMKILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGK---------- 50 Query: 67 KVHLQLWDTAGQERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVRNWMSQLQANAYCENP 126 KV LQLWDTAGQERFR++TTA++R AMG +L++D+T +++F N++ W + +A E Sbjct: 51 KVKLQLWDTAGQERFRTITTAYYRGAMGIILVYDVTDERTFTNIKQWFKTVNEHANDE-A 109 Query: 127 DIVLIGNKADLPDQREVNERQARELADKYGIPYFETSAATGQNVEKAVETLLDLIMKRME 186 ++L+GNK+D+ R V Q LA + GIP+ E+SA NV + TL LI ++++ Sbjct: 110 QLLLVGNKSDMET-RVVTADQGEALAKELGIPFIESSAKNDDNVNEIFFTLAKLIQEKID 168 Query: 187 QC 188 Sbjct: 169 SN 170 >2EW1-A nrPDB Length = 201 Score = 217 bits (553), Expect = 3e-57, Method: Composition-based stats. Identities = 72/195 (36%), Positives = 114/195 (58%), Gaps = 14/195 (7%) Query: 4 GDYDYLIKLLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYNAQGPNGSSG 63 DYD+L K++ +G++GVGKT + R+T F P T+G+DF K V N + Sbjct: 21 EDYDFLFKIVLIGNAGVGKTCLVRRFTQGLFPPGQGATIGVDFMIKTVEINGE------- 73 Query: 64 KAFKVHLQLWDTAGQERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVRNWMSQLQANAYC 123 KV LQ+WDTAGQERFRS+T +++R A +L +D+T ++SF + W+ +++ A Sbjct: 74 ---KVKLQIWDTAGQERFRSITQSYYRSANALILTYDITCEESFRCLPEWLREIEQYA-S 129 Query: 124 ENPDIVLIGNKADLPDQREVNERQARELADKYGIPYFETSAATGQNVEKAVETLLDLIMK 183 VL+GNK DL ++REV++++A E ++ + Y ETSA NVEK LDL + Sbjct: 130 NKVITVLVGNKIDLAERREVSQQRAEEFSEAQDMYYLETSAKESDNVEKLF---LDLACR 186 Query: 184 RMEQCVEKTQIPDTV 198 + + + T + + Sbjct: 187 LISEARQNTLVNNVS 201 >4RKE-A nrPDB Length = 176 Score = 216 bits (551), Expect = 5e-57, Method: Composition-based stats. Identities = 63/182 (34%), Positives = 110/182 (60%), Gaps = 11/182 (6%) Query: 5 DYDYLIKLLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYNAQGPNGSSGK 64 Y YL K + +GD+GVGK+ L ++TD +F P T+G++F + + + + Sbjct: 6 SYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGK-------- 57 Query: 65 AFKVHLQLWDTAGQERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVRNWMSQLQANAYCE 124 ++ LQ+WDTAG E FRS+T +++R A G LL++D+T +++F ++ W+ + ++ Sbjct: 58 --QIKLQIWDTAGLEAFRSITRSYYRGAAGALLVYDITRRETFNHLTTWLEDARQHSNS- 114 Query: 125 NPDIVLIGNKADLPDQREVNERQARELADKYGIPYFETSAATGQNVEKAVETLLDLIMKR 184 N I+LIGNK+DL +REV + + A ++G+ + ETSA T NVE+A I ++ Sbjct: 115 NMVIMLIGNKSDLDSRREVKKEEGEAFAREHGLVFMETSARTAANVEEAFINTAKEIYEK 174 Query: 185 ME 186 ++ Sbjct: 175 IQ 176 >2G6B-A nrPDB Length = 180 Score = 216 bits (551), Expect = 6e-57, Method: Composition-based stats. Identities = 76/180 (42%), Positives = 111/180 (61%), Gaps = 12/180 (6%) Query: 6 YDYLIKLLALGDSGVGKTTFLYRYTDNKF-NPKFITTVGIDFREKRVVYNAQGPNGSSGK 64 YD K++ +GDSGVGKT L R+ D F FI+TVGIDFR K + + Sbjct: 7 YDVAFKVMLVGDSGVGKTCLLVRFKDGAFLAGTFISTVGIDFRNKVLDVDG--------- 57 Query: 65 AFKVHLQLWDTAGQERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVRNWMSQLQANAYCE 124 KV LQ+WDTAGQERFRS+T A++RDA LL++D+T++ SF N++ W++++ A Sbjct: 58 -VKVKLQMWDTAGQERFRSVTHAYYRDAHALLLLYDVTNKASFDNIQAWLTEIHEYAQ-H 115 Query: 125 NPDIVLIGNKADLPDQREVNERQARELADKYGIPYFETSAATGQNVEKAVETLLDLIMKR 184 + ++L+GNK D +R V +LA +YG+P+ ETSA TG NV+ A + + +R Sbjct: 116 DVALMLLGNKVDSAHERVVKREDGEKLAKEYGLPFMETSAKTGLNVDLAFTAIAKELKRR 175 >1Z0F-A nrPDB Length = 179 Score = 216 bits (550), Expect = 6e-57, Method: Composition-based stats. Identities = 65/180 (36%), Positives = 111/180 (61%), Gaps = 11/180 (6%) Query: 5 DYDYLIKLLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYNAQGPNGSSGK 64 +Y Y+ K + +GD GVGK+ L+++T+ KF T+G++F + + + Q Sbjct: 11 NYSYIFKYIIIGDMGVGKSCLLHQFTEKKFMADCPHTIGVEFGTRIIEVSGQ-------- 62 Query: 65 AFKVHLQLWDTAGQERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVRNWMSQLQANAYCE 124 K+ LQ+WDTAGQERFR++T +++R A G L+++D+T + ++ ++ +W++ + N Sbjct: 63 --KIKLQIWDTAGQERFRAVTRSYYRGAAGALMVYDITRRSTYNHLSSWLTDAR-NLTNP 119 Query: 125 NPDIVLIGNKADLPDQREVNERQARELADKYGIPYFETSAATGQNVEKAVETLLDLIMKR 184 N I+LIGNKADL QR+V +A++ A++ G+ + E SA TG+NVE A I + Sbjct: 120 NTVIILIGNKADLEAQRDVTYEEAKQFAEENGLLFLEASAKTGENVEDAFLEAAKKIYQN 179 >3TSO-A nrPDB Length = 178 Score = 216 bits (550), Expect = 6e-57, Method: Composition-based stats. Identities = 71/184 (38%), Positives = 112/184 (60%), Gaps = 11/184 (5%) Query: 4 GDYDYLIKLLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYNAQGPNGSSG 63 DY+++ K++ +G+SGVGKT L R+T N+F+ TT+G++F + V+ Sbjct: 5 EDYNFVFKVVLIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVMLGTAA------ 58 Query: 64 KAFKVHLQLWDTAGQERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVRNWMSQLQANAYC 123 V Q+WDTAG ER+R++T+A++R A+G LL+FDLT Q++ V W+ +L +A Sbjct: 59 ----VKAQIWDTAGLERYRAITSAYYRGAVGALLVFDLTKHQTYAVVERWLKELYDHAEA 114 Query: 124 ENPDIVLIGNKADLPDQREVNERQARELADKYGIPYFETSAATGQNVEKAVETLLDLIMK 183 ++L+GNK+DL REV +AR A+ G+ + ETSA NVE A ET+L I Sbjct: 115 T-IVVMLVGNKSDLSQAREVPTEEARMFAENNGLLFLETSALDSTNVELAFETVLKEIFA 173 Query: 184 RMEQ 187 ++ + Sbjct: 174 KVSK 177 >3RWM-B nrPDB Length = 185 Score = 215 bits (547), Expect = 2e-56, Method: Composition-based stats. Identities = 70/190 (36%), Positives = 116/190 (61%), Gaps = 15/190 (7%) Query: 5 DYDYLIKLLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYNAQGPNGSSGK 64 DYDYL K++ +GDSGVGK+ L R+T ++FN + +T+G++F + + + Sbjct: 6 DYDYLFKIVLIGDSGVGKSNLLSRFTTDEFNIESKSTIGVEFATRTIEVENK-------- 57 Query: 65 AFKVHLQLWDTAGQERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVRNWMSQLQANAYCE 124 K+ Q+WDTAG ER+R++T+A++R A+G L+++D++ S+ N +W+++L+ NA + Sbjct: 58 --KIKAQIWDTAGLERYRAITSAYYRGAVGALIVYDISKSSSYENCNHWLTELRENAD-D 114 Query: 125 NPDIVLIGNKADLPDQREVNERQARELADKYGIPYFETSAATGQNVEKAVETLLDLIMKR 184 N + LIGNK+DL R V +A+ A + + + ETSA NV+KA L+ I Sbjct: 115 NVAVGLIGNKSDLAHLRAVPTDEAKNFAMENQMLFTETSALNSDNVDKAFRELIVAIF-- 172 Query: 185 MEQCVEKTQI 194 Q V K Q+ Sbjct: 173 --QMVSKHQV 180 >3BFK-A nrPDB Length = 181 Score = 214 bits (545), Expect = 3e-56, Method: Composition-based stats. Identities = 72/188 (38%), Positives = 115/188 (61%), Gaps = 12/188 (6%) Query: 6 YDYLIKLLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYNAQGPNGSSGKA 65 YDYL K++ +GDSGVGK+ L R+T ++FN + +T+G++F K + Sbjct: 4 YDYLFKIVLIGDSGVGKSNLLSRFTRDEFNLESKSTIGVEFATKSIQLKNN--------- 54 Query: 66 FKVHLQLWDTAGQERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVRNWMSQLQANAYCEN 125 + Q+WDTAGQER+R++T+A++R A+G LL++D+T + SF N+ W+ +L+ NA N Sbjct: 55 KIIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKKNSFENIEKWLKELRDNADS-N 113 Query: 126 PDIVLIGNKADLPDQREVNERQARELADKYGIPYFETSAATGQNVEKAVETLLDLIM--K 183 I+L+GNK+DL R +N+ A + A K + + ETSA NVE A LL+ I + Sbjct: 114 IVILLVGNKSDLKHLRVINDNDATQYAKKEKLAFIETSALEATNVELAFHQLLNEIYNVR 173 Query: 184 RMEQCVEK 191 + +Q + Sbjct: 174 QKKQATKN 181 >2O52-A nrPDB Length = 200 Score = 213 bits (543), Expect = 5e-56, Method: Composition-based stats. Identities = 64/183 (34%), Positives = 107/183 (58%), Gaps = 11/183 (6%) Query: 7 DYLIKLLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYNAQGPNGSSGKAF 66 D+L K L +G +G GK+ L+++ +NKF T+G++F + V + Sbjct: 23 DFLFKFLVIGSAGTGKSCLLHQFIENKFKQDSNHTIGVEFGSRVVNVGGK---------- 72 Query: 67 KVHLQLWDTAGQERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVRNWMSQLQANAYCENP 126 V LQ+WDTAGQERFRS+T +++R A G LL++D+TS++++ ++ W++ + A N Sbjct: 73 TVKLQIWDTAGQERFRSVTRSYYRGAAGALLVYDITSRETYNSLAAWLTDARTLA-SPNI 131 Query: 127 DIVLIGNKADLPDQREVNERQARELADKYGIPYFETSAATGQNVEKAVETLLDLIMKRME 186 ++L GNK DL +REV +A A + + + ETSA TG+NVE+A I+ +++ Sbjct: 132 VVILCGNKKDLDPEREVTFLEASRFAQENELMFLETSALTGENVEEAFLKCARTILNKID 191 Query: 187 QCV 189 Sbjct: 192 SGE 194 >1X3S-A nrPDB Length = 195 Score = 212 bits (539), Expect = 1e-55, Method: Composition-based stats. Identities = 66/198 (33%), Positives = 115/198 (58%), Gaps = 11/198 (5%) Query: 3 DGDYDYLIKLLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYNAQGPNGSS 62 D D +K+L +G+SGVGK++ L R+TD+ F+P+ T+G+DF+ K + + Sbjct: 9 DEDVLTTLKILIIGESGVGKSSLLLRFTDDTFDPELAATIGVDFKVKTISVDGN------ 62 Query: 63 GKAFKVHLQLWDTAGQERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVRNWMSQLQANAY 122 K L +WDTAGQERFR+LT +++R A G +L++D+T + +F+ + NW+++L+ Sbjct: 63 ----KAKLAIWDTAGQERFRTLTPSYYRGAQGVILVYDVTRRDTFVKLDNWLNELETYCT 118 Query: 123 CENPDIVLIGNKADLPDQREVNERQARELADKYGIPYFETSAATGQNVEKAVETLLDLIM 182 + +L+GNK D + REV+ + + A K+ + + E SA T V+ A E L++ I+ Sbjct: 119 RNDIVNMLVGNKID-KENREVDRNEGLKFARKHSMLFIEASAKTCDGVQCAFEELVEKII 177 Query: 183 KRMEQCVEKTQIPDTVNG 200 + + Q +G Sbjct: 178 QTPGLWESENQNSGPSSG 195 >2BMD-A nrPDB Length = 186 Score = 212 bits (539), Expect = 1e-55, Method: Composition-based stats. Identities = 67/186 (36%), Positives = 108/186 (58%), Gaps = 11/186 (5%) Query: 4 GDYDYLIKLLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYNAQGPNGSSG 63 YD+L K L +G++G GK+ L+++ + KF T+G++F K + + Sbjct: 5 ETYDFLFKFLVIGNAGTGKSCLLHQFIEKKFKDDSNHTIGVEFGSKIINVGGKY------ 58 Query: 64 KAFKVHLQLWDTAGQERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVRNWMSQLQANAYC 123 V LQ+WDTAGQERFRS+T +++R A G LL++D+TS++++ + NW++ + A Sbjct: 59 ----VKLQIWDTAGQERFRSVTRSYYRGAAGALLVYDITSRETYNALTNWLTDARMLA-S 113 Query: 124 ENPDIVLIGNKADLPDQREVNERQARELADKYGIPYFETSAATGQNVEKAVETLLDLIMK 183 +N I+L GNK DL REV +A A + + + ETSA TG+NVE+A I+ Sbjct: 114 QNIVIILCGNKKDLDADREVTFLEASRFAQENELMFLETSALTGENVEEAFVQCARKILN 173 Query: 184 RMEQCV 189 ++E Sbjct: 174 KIESGE 179 >2HUP-A nrPDB Length = 201 Score = 208 bits (530), Expect = 1e-54, Method: Composition-based stats. Identities = 70/183 (38%), Positives = 110/183 (60%), Gaps = 12/183 (6%) Query: 3 DGDYDYLIKLLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYNAQGPNGSS 62 D YD+L KL+ +GD+ VGKT + R+ F+ + +T+G+DF K + + Sbjct: 23 DEQYDFLFKLVLVGDASVGKTCVVQRFKTGAFSERQGSTIGVDFTMKTLEIQGK------ 76 Query: 63 GKAFKVHLQLWDTAGQERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVRNWMSQLQANAY 122 +V LQ+WDTAGQERFR++T +++R A G +L +D+T + SFL+V +W+ ++ A Sbjct: 77 ----RVKLQIWDTAGQERFRTITQSYYRSANGAILAYDITKRSSFLSVPHWIEDVRKYAG 132 Query: 123 CENPDIVLIGNKADLPDQREVNERQARELADKYGIPY-FETSAATGQNVEKAVETLLDLI 181 N +LIGNK+DL + REV+ +A+ LA+ Y I ETSA NVE+A + + Sbjct: 133 S-NIVQLLIGNKSDLSELREVSLAEAQSLAEHYDILCAIETSAKDSSNVEEAFLRVATEL 191 Query: 182 MKR 184 + R Sbjct: 192 IMR 194 >1TU4-A nrPDB Length = 171 Score = 206 bits (525), Expect = 5e-54, Method: Composition-based stats. Identities = 58/176 (32%), Positives = 97/176 (55%), Gaps = 11/176 (6%) Query: 9 LIKLLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYNAQGPNGSSGKAFKV 68 KL+ LG+S VGK++ + R+ +F+ +T+G F + V + V Sbjct: 7 QFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDD----------TTV 56 Query: 69 HLQLWDTAGQERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVRNWMSQLQANAYCENPDI 128 ++WDTAGQER+ SL ++R A ++++D+T+++SF +NW+ +LQ A N I Sbjct: 57 KFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNEESFARAKNWVKELQRQA-SPNIVI 115 Query: 129 VLIGNKADLPDQREVNERQARELADKYGIPYFETSAATGQNVEKAVETLLDLIMKR 184 L GNKADL ++R V+ ++A+ AD + + ETSA T NV + + + K Sbjct: 116 ALSGNKADLANKRAVDFQEAQSYADDNSLLFMETSAKTSMNVNEIFMAIAKKLPKN 171 >2HEI-A nrPDB Length = 179 Score = 206 bits (525), Expect = 6e-54, Method: Composition-based stats. Identities = 57/181 (31%), Positives = 95/181 (52%), Gaps = 11/181 (6%) Query: 9 LIKLLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYNAQGPNGSSGKAFKV 68 KL+ LG+S VGK++ + R+ +F+ +T+G F + V + V Sbjct: 8 QFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQSVCLDD----------TTV 57 Query: 69 HLQLWDTAGQERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVRNWMSQLQANAYCENPDI 128 ++WDTAGQER+ SL ++R A ++++D+T+Q++F + W+ +LQ A + I Sbjct: 58 KFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNQETFARAKTWVKELQRQA-SPSIVI 116 Query: 129 VLIGNKADLPDQREVNERQARELADKYGIPYFETSAATGQNVEKAVETLLDLIMKRMEQC 188 L GNKADL ++R V +A+ AD + + ETSA T NV + + K Q Sbjct: 117 ALAGNKADLANKRMVEYEEAQAYADDNSLLFMETSAKTAMNVNDLFLAIAKKLPKSEPQN 176 Query: 189 V 189 + Sbjct: 177 L 177 >4QXA-A nrPDB Length = 208 Score = 205 bits (523), Expect = 8e-54, Method: Composition-based stats. Identities = 71/205 (34%), Positives = 104/205 (50%), Gaps = 16/205 (7%) Query: 9 LIKLLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYNAQGPNGSSGKAFKV 68 L K++ LGD GVGK++ + RY NKF+ + T+G++F K + + V Sbjct: 8 LFKIILLGDGGVGKSSLMNRYVTNKFDSQLFHTIGVEFLNKDLEVDGHF----------V 57 Query: 69 HLQLWDTAGQERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVRNWMSQLQANAYCENP-- 126 +Q+WDTAG ERFRSL T F+R + LL F + QSF N+ NW + A + P Sbjct: 58 TMQIWDTAGLERFRSLRTPFYRGSDCCLLTFSVDDSQSFQNLSNWKKEFIYYADVKEPES 117 Query: 127 -DIVLIGNKADLPDQREVNERQARELADKYG-IPYFETSAATGQNVEKAVETLLDLIMKR 184 V++GNK D+ +R+V+ +A+ G PYFETSA NV A E + I+ Sbjct: 118 FPFVILGNKTDIK-ERQVSTEEAQAWCKDNGDYPYFETSAKDSTNVAAAFEEAVRRILAT 176 Query: 185 MEQCVEKTQIPDTVNGGNSGNLDGE 209 ++ Q DTVN + Sbjct: 177 EDRSEHLIQT-DTVNLHRKPKPNSS 200 >4G01-B nrPDB Length = 181 Score = 205 bits (522), Expect = 1e-53, Method: Composition-based stats. Identities = 58/182 (31%), Positives = 95/182 (52%), Gaps = 11/182 (6%) Query: 2 TDGDYDYLIKLLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYNAQGPNGS 61 G+ KL+ LGD G GK++ + R+ ++F +T+G F + + N Sbjct: 5 AAGNKSINAKLVLLGDVGAGKSSLVLRFVKDQFVEFQESTIGAAFFSQTLAVND------ 58 Query: 62 SGKAFKVHLQLWDTAGQERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVRNWMSQLQANA 121 V ++WDTAGQER+ SL ++R A +++FD+T+Q SF + W+ +LQA Sbjct: 59 ----ATVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVFDVTNQASFERAKKWVQELQAQ- 113 Query: 122 YCENPDIVLIGNKADLPDQREVNERQARELADKYGIPYFETSAATGQNVEKAVETLLDLI 181 N + L GNK+DL D R+V A+ A + G+ + ETSA T NV++ + + Sbjct: 114 GNPNMVMALAGNKSDLLDARKVTAEDAQTYAQENGLFFMETSAKTATNVKEIFYEIARRL 173 Query: 182 MK 183 + Sbjct: 174 PR 175 >1Z06-A nrPDB Length = 189 Score = 203 bits (516), Expect = 5e-53, Method: Composition-based stats. Identities = 58/185 (31%), Positives = 98/185 (52%), Gaps = 14/185 (7%) Query: 4 GDYDYLIKLLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYNAQGPNGSSG 63 G + K++ +GDS VGKT YR+ +F + T+G+DFRE+ V + + Sbjct: 15 GSRSRIFKIIVIGDSNVGKTCLTYRFCAGRFPDRTEATIGVDFRERAVDIDGE------- 67 Query: 64 KAFKVHLQLWDTAGQERFR-SLTTAFFRDAMGFLLMFDLTSQQSFLNVRNWMSQLQANAY 122 ++ +QLWDTAGQERFR S+ ++R+ + ++D+T+ SF ++ W+ + + + Sbjct: 68 ---RIKIQLWDTAGQERFRKSMVQHYYRNVHAVVFVYDMTNMASFHSLPAWIEECKQHLL 124 Query: 123 CENPDIVLIGNKADLPDQREVNERQARELADKYGIPYFETSAA---TGQNVEKAVETLLD 179 + +L+GNK DL +V A++ AD + +P FETSA +VE TL Sbjct: 125 ANDIPRILVGNKCDLRSAIQVPTDLAQKFADTHSMPLFETSAKNPNDNDHVEAIFMTLAH 184 Query: 180 LIMKR 184 + Sbjct: 185 KLKSH 189 >4KYI-B nrPDB Length = 170 Score = 203 bits (516), Expect = 6e-53, Method: Composition-based stats. Identities = 55/173 (31%), Positives = 91/173 (52%), Gaps = 11/173 (6%) Query: 9 LIKLLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYNAQGPNGSSGKAFKV 68 KL+ LG+S VGK++ + R+ +F+ +T+G F + V + V Sbjct: 9 QFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDD----------TTV 58 Query: 69 HLQLWDTAGQERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVRNWMSQLQANAYCENPDI 128 ++WDTAG ER+ SL ++R A ++++D+T+ +F +NW+ +LQ A N I Sbjct: 59 KFEIWDTAGLERYHSLAPMYYRGAQAAIVVYDITNTDTFARAKNWVKELQRQA-SPNIVI 117 Query: 129 VLIGNKADLPDQREVNERQARELADKYGIPYFETSAATGQNVEKAVETLLDLI 181 L GNKADL +R V ++A+ AD + + ETSA T NV + + + Sbjct: 118 ALAGNKADLASKRAVEFQEAQAYADDNSLLFMETSAKTAMNVNEIFMAIAKKL 170 >2IL1-A nrPDB Length = 192 Score = 203 bits (516), Expect = 6e-53, Method: Composition-based stats. Identities = 64/180 (35%), Positives = 110/180 (61%), Gaps = 12/180 (6%) Query: 7 DYLIKLLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYNAQGPNGSSGKAF 66 D+ ++++ +G GVGKT+ + R+TD+ F +TVG+DF+ K V + Sbjct: 24 DFKLQVIIIGSRGVGKTSLMERFTDDTFCEACKSTVGVDFKIKTVELRGK---------- 73 Query: 67 KVHLQLWDTAGQERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVRNWMSQLQANAYCENP 126 K+ LQ+WDTAGQERF S+T+A++R A G +L++D+T +++F ++ WM + A E+ Sbjct: 74 KIRLQIWDTAGQERFNSITSAYYRSAKGIILVYDITKKETFDDLPKWMKMIDKYA-SEDA 132 Query: 127 DIVLIGNKADLPDQREVNERQARELADKY-GIPYFETSAATGQNVEKAVETLLDLIMKRM 185 +++L+GNK D RE+ +Q + A + G+ + E SA NV++ L+D I+K+M Sbjct: 133 ELLLVGNKLDCETDREITRQQGEKFAQQITGMRFCEASAKDNFNVDEIFLKLVDDILKKM 192 >2G77-B nrPDB Length = 198 Score = 200 bits (510), Expect = 3e-52, Method: Composition-based stats. Identities = 57/181 (31%), Positives = 97/181 (53%), Gaps = 14/181 (7%) Query: 8 YLIKLLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYNAQGPNGSSGKAFK 67 + K++ +GDS VGKT YR+ +F + T+G+DFRE+ V + + + Sbjct: 28 RIFKIIVIGDSNVGKTCLTYRFCAGRFPDRTEATIGVDFRERAVDIDGE----------R 77 Query: 68 VHLQLWDTAGQERFR-SLTTAFFRDAMGFLLMFDLTSQQSFLNVRNWMSQLQANAYCENP 126 + +QLWDTAGQERFR S+ ++R+ + ++D+T+ SF ++ W+ + + + + Sbjct: 78 IKIQLWDTAGQERFRKSMVQHYYRNVHAVVFVYDMTNMASFHSLPAWIEECKQHLLANDI 137 Query: 127 DIVLIGNKADLPDQREVNERQARELADKYGIPYFETSAA---TGQNVEKAVETLLDLIMK 183 +L+GNK DL +V A++ AD + +P FETSA +VE TL + Sbjct: 138 PRILVGNKCDLRSAIQVPTDLAQKFADTHSMPLFETSAKNPNDNDHVEAIFMTLAHKLKS 197 Query: 184 R 184 Sbjct: 198 H 198 >5CM8-B nrPDB Length = 203 Score = 200 bits (510), Expect = 3e-52, Method: Composition-based stats. Identities = 54/179 (30%), Positives = 94/179 (52%), Gaps = 11/179 (6%) Query: 9 LIKLLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYNAQGPNGSSGKAFKV 68 L K++ +G GVGK+ ++ ++F + T +R K+VV + + +V Sbjct: 13 LHKVIMVGSGGVGKSALTLQFMYDEFVEDYEPTKADSYR-KKVVLDGE----------EV 61 Query: 69 HLQLWDTAGQERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVRNWMSQLQANAYCENPDI 128 + + DTAGQE + ++ +FR GFL +F +T +SF + + Q+ E+ Sbjct: 62 QIDILDTAGQEDYAAIRDNYFRSGEGFLCVFSITDDESFQATQEFREQILRVKNDESIPF 121 Query: 129 VLIGNKADLPDQREVNERQARELADKYGIPYFETSAATGQNVEKAVETLLDLIMKRMEQ 187 +L+GNK DL D+R+V + + A ++ +PY ETSA T +NV+K L+ I R + Sbjct: 122 LLVGNKCDLNDKRKVPLSECQLRAQQWAVPYVETSAKTRENVDKVFFDLMREIRSRKTE 180 >1WMS-A nrPDB Length = 177 Score = 200 bits (509), Expect = 4e-52, Method: Composition-based stats. Identities = 66/182 (36%), Positives = 98/182 (53%), Gaps = 15/182 (8%) Query: 9 LIKLLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYNAQGPNGSSGKAFKV 68 L K++ LGD GVGK++ + RY NKF+ + T+G++F K + + V Sbjct: 7 LFKVILLGDGGVGKSSLMNRYVTNKFDTQLFHTIGVEFLNKDLEVDGHF----------V 56 Query: 69 HLQLWDTAGQERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVRNWMSQLQANAYCENP-- 126 +Q+WDTAGQERFRSL T F+R + LL F + QSF N+ NW + A + P Sbjct: 57 TMQIWDTAGQERFRSLRTPFYRGSDCCLLTFSVDDSQSFQNLSNWKKEFIYYADVKEPES 116 Query: 127 -DIVLIGNKADLPDQREVNERQARELADKYG-IPYFETSAATGQNVEKAVETLLDLIMKR 184 V++GNK D+ +R+V+ +A+ G PYFETSA NV A E + ++ Sbjct: 117 FPFVILGNKIDIS-ERQVSTEEAQAWCRDNGDYPYFETSAKDATNVAAAFEEAVRRVLAT 175 Query: 185 ME 186 + Sbjct: 176 ED 177 >2FG5-A nrPDB Length = 192 Score = 200 bits (508), Expect = 5e-52, Method: Composition-based stats. Identities = 56/172 (32%), Positives = 91/172 (52%), Gaps = 11/172 (6%) Query: 10 IKLLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYNAQGPNGSSGKAFKVH 69 +K+ LGD+GVGK++ + R+ + F+ T+G F K V + Sbjct: 24 LKVCLLGDTGVGKSSIVCRFVQDHFDHNISPTIGASFMTKTVPCGNELH----------K 73 Query: 70 LQLWDTAGQERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVRNWMSQLQANAYCENPDIV 129 +WDTAGQERF SL ++R + ++++D+T Q SF ++ W+ +L+ + EN + Sbjct: 74 FLIWDTAGQERFHSLAPMYYRGSAAAVIVYDITKQDSFYTLKKWVKELKEH-GPENIVMA 132 Query: 130 LIGNKADLPDQREVNERQARELADKYGIPYFETSAATGQNVEKAVETLLDLI 181 + GNK DL D REV + A+E A+ G ETSA N+E+ + + I Sbjct: 133 IAGNKCDLSDIREVPLKDAKEYAESIGAIVVETSAKNAINIEELFQGISRQI 184 >6IYB-A nrPDB Length = 199 Score = 199 bits (507), Expect = 7e-52, Method: Composition-based stats. Identities = 66/198 (33%), Positives = 109/198 (55%), Gaps = 14/198 (7%) Query: 9 LIKLLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYNAQGPNGSSGKAFKV 68 L+K++ LGDSGVGKT+ + +Y + KF+ ++ T+G DF K V+ + + V Sbjct: 13 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDR----------LV 62 Query: 69 HLQLWDTAGQERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVRNWMSQLQANAYCENP-- 126 +Q+WDTAG ERF+S AF+R A +L+FD+T+ +F + +W + A +P Sbjct: 63 TMQIWDTAGLERFQS-GVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPEN 121 Query: 127 -DIVLIGNKADLPDQREVNERQARELADKYGIPYFETSAATGQNVEKAVETLLDLIMKRM 185 V++GNK DL +++ +R K IPYFETSA NVE+A +T+ +K+ Sbjct: 122 FPFVVLGNKIDLENRQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIARNALKQE 181 Query: 186 EQCVEKTQIPDTVNGGNS 203 + + P+ + + Sbjct: 182 TEVELYNEFPEPIKLDKN 199 >2FFQ-A nrPDB Length = 171 Score = 199 bits (506), Expect = 9e-52, Method: Composition-based stats. Identities = 57/174 (32%), Positives = 97/174 (55%), Gaps = 11/174 (6%) Query: 10 IKLLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYNAQGPNGSSGKAFKVH 69 KL+ LG+ VGKT+ + R+ + F+ + T+GIDF K + + V Sbjct: 3 FKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDR----------TVR 52 Query: 70 LQLWDTAGQERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVRNWMSQLQANAYCENPDIV 129 LQLWDTAGQERFRSL ++ RD+ ++++D+T+ SF W+ ++ + I+ Sbjct: 53 LQLWDTAGQERFRSLIPSYIRDSTVAVVVYDITNLNSFQQTSKWIDDVRTERGS-DVIIM 111 Query: 130 LIGNKADLPDQREVNERQARELADKYGIPYFETSAATGQNVEKAVETLLDLIMK 183 L+GNK DL D+R++ + + A + + + ETSA TG NV++ + +++ Sbjct: 112 LVGNKTDLADKRQITIEEGEQRAKELSVMFIETSAKTGYNVKQLFRRVASALLE 165 >4KLZ-A nrPDB Length = 173 Score = 198 bits (503), Expect = 2e-51, Method: Composition-based stats. Identities = 46/179 (25%), Positives = 89/179 (49%), Gaps = 11/179 (6%) Query: 10 IKLLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYNAQGPNGSSGKAFKVH 69 KL+ LG GVGK+ ++ ++F T+ ++ + + + + N Sbjct: 6 YKLVMLGAGGVGKSAMTMQFISHRFPEDHDPTIEDAYKIR-IRIDDEPAN---------- 54 Query: 70 LQLWDTAGQERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVRNWMSQLQANAYCENPDIV 129 L + DTAGQ F ++ + R GF++ + +T ++SF VR + + ++ +V Sbjct: 55 LDILDTAGQAEFTAMRDQYMRAGEGFIICYSITDRRSFHEVREFKQLIYRVRRTDDTPVV 114 Query: 130 LIGNKADLPDQREVNERQARELADKYGIPYFETSAATGQNVEKAVETLLDLIMKRMEQC 188 L+GNK+DL R+V + + LA ++ P+FETSAA ++ L+ I ++ ++ Sbjct: 115 LVGNKSDLKQLRQVTKEEGLALAREFSCPFFETSAAYRYYIDDVFHALVREIRRKEKEA 173 >1D5C-A nrPDB Length = 162 Score = 198 bits (503), Expect = 2e-51, Method: Composition-based stats. Identities = 59/166 (35%), Positives = 94/166 (56%), Gaps = 11/166 (6%) Query: 10 IKLLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYNAQGPNGSSGKAFKVH 69 KL+ LG+ VGKT+ + R+ + F+ + +T+GIDF K + + V Sbjct: 2 YKLVFLGEQAVGKTSIITRFMYDTFDNNYQSTIGIDFLSKTLYLDEG----------PVR 51 Query: 70 LQLWDTAGQERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVRNWMSQLQANAYCENPDIV 129 LQLWDTAGQERFRSL ++ RD+ ++++D+T++QSF N W+ + ++ I Sbjct: 52 LQLWDTAGQERFRSLIPSYIRDSAAAIVVYDITNRQSFENTTKWIQDILNER-GKDVIIA 110 Query: 130 LIGNKADLPDQREVNERQARELADKYGIPYFETSAATGQNVEKAVE 175 L+GNK DL D R+V + + A +Y + ETSA G N++ + Sbjct: 111 LVGNKTDLGDLRKVTYEEGMQKAQEYNTMFHETSAKAGHNIKVLFK 156 >2OCB-A nrPDB Length = 180 Score = 198 bits (503), Expect = 2e-51, Method: Composition-based stats. Identities = 67/185 (36%), Positives = 101/185 (54%), Gaps = 15/185 (8%) Query: 9 LIKLLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYNAQGPNGSSGKAFKV 68 L+K++ LGD GVGK++ + RY NKF+ + T+G++F + + + + V Sbjct: 7 LLKVILLGDGGVGKSSLMNRYVTNKFDSQAFHTIGVEFLNRDLEVDGRF----------V 56 Query: 69 HLQLWDTAGQERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVRNWMSQLQANAYCENP-- 126 LQ+WDTAGQERF+SL T F+R A LL F + +QSF N+ NW + A ++P Sbjct: 57 TLQIWDTAGQERFKSLRTPFYRGADCCLLTFSVDDRQSFENLGNWQKEFIYYADVKDPEH 116 Query: 127 -DIVLIGNKADLPDQREVNERQARELADKYG-IPYFETSAATGQNVEKAVETLLDLIMKR 184 V++GNK D + R+V +A+ + G PY ETSA NV A E + ++ Sbjct: 117 FPFVVLGNKVD-KEDRQVTTEEAQTWCMENGDYPYLETSAKDDTNVTVAFEEAVRQVLAV 175 Query: 185 MEQCV 189 EQ Sbjct: 176 EEQLE 180 >1YVD-A nrPDB Length = 169 Score = 197 bits (501), Expect = 3e-51, Method: Composition-based stats. Identities = 55/172 (31%), Positives = 96/172 (55%), Gaps = 11/172 (6%) Query: 10 IKLLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYNAQGPNGSSGKAFKVH 69 +K+ LGD+GVGK++ ++R+ ++ F+P T+G F K V Y + Sbjct: 6 LKVCLLGDTGVGKSSIVWRFVEDSFDPNINPTIGASFMTKTVQYQNELH----------K 55 Query: 70 LQLWDTAGQERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVRNWMSQLQANAYCENPDIV 129 +WDTAGQERFR+L ++R + ++++D+T +++F ++NW+ +L+ + + + Sbjct: 56 FLIWDTAGQERFRALAPMYYRGSAAAIIVYDITKEETFSTLKNWVRELRQH-GPPSIVVA 114 Query: 130 LIGNKADLPDQREVNERQARELADKYGIPYFETSAATGQNVEKAVETLLDLI 181 + GNK DL D REV ER A++ AD + ETSA N+ + + I Sbjct: 115 IAGNKCDLTDVREVMERDAKDYADSIHAIFVETSAKNAININELFIEISRRI 166 >5LDD-C nrPDB Length = 207 Score = 196 bits (498), Expect = 7e-51, Method: Composition-based stats. Identities = 67/196 (34%), Positives = 110/196 (56%), Gaps = 15/196 (7%) Query: 9 LIKLLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYNAQGPNGSSGKAFKV 68 L+K++ LGDSGVGKT+ + +Y + KF+ + T+G DF + V+ + + +V Sbjct: 10 LLKVIILGDSGVGKTSLMNQYVNKKFSASYKATIGADFLTREVMVDDR----------QV 59 Query: 69 HLQLWDTAGQERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVRNWMSQLQANAYCENP-- 126 +QLWDTAGQERF+SL AF+R A +L+FD+ + +SF + +W + A +P Sbjct: 60 TMQLWDTAGQERFQSLGVAFYRGADCCVLVFDVNNAKSFDALDSWRDEFLIQASPRDPEN 119 Query: 127 -DIVLIGNKADLPD-QREVNERQARELADKY-GIPYFETSAATGQNVEKAVETLLDLIMK 183 V++G K D+ + +R ++ ++A+ GIPYFETSA NVE+A + + + Sbjct: 120 FPFVVLGIKIDVEESKRVISTKRAQTFCQSKGGIPYFETSAKEAINVEEAFQVIARNALM 179 Query: 184 RMEQCVEKTQIPDTVN 199 + E D +N Sbjct: 180 QEESEEFSGDFQDPIN 195 >1EK0-A nrPDB Length = 170 Score = 195 bits (497), Expect = 9e-51, Method: Composition-based stats. Identities = 62/175 (35%), Positives = 99/175 (56%), Gaps = 14/175 (8%) Query: 10 IKLLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYNAQGPNGSSGKAFKVH 69 IKL+ LG++ VGK++ + R+ N F T+G F +RV N V Sbjct: 4 IKLVLLGEAAVGKSSIVLRFVSNDFAENKEPTIGAAFLTQRVTINEH----------TVK 53 Query: 70 LQLWDTAGQERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVRNWMSQLQANAYCENPDIV 129 ++WDTAGQERF SL ++R+A L+++D+T QSF+ R+W+ +L A ++ I Sbjct: 54 FEIWDTAGQERFASLAPMYYRNAQAALVVYDVTKPQSFIKARHWVKELHEQA-SKDIIIA 112 Query: 130 LIGNKADLPD---QREVNERQARELADKYGIPYFETSAATGQNVEKAVETLLDLI 181 L+GNK D+ +R+V + +LA++ G+ +FETSA TG+NV + + I Sbjct: 113 LVGNKIDMLQEGGERKVAREEGEKLAEEKGLLFFETSAKTGENVNDVFLGIGEKI 167 >1YZU-A nrPDB Length = 170 Score = 195 bits (497), Expect = 9e-51, Method: Composition-based stats. Identities = 64/184 (34%), Positives = 104/184 (56%), Gaps = 15/184 (8%) Query: 4 GDYDYLIKLLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYNAQGPNGSSG 63 G Y K++ LG+ VGKT+ + RY +NKFN K ITT+ F K++ + Sbjct: 1 GSRAYSFKVVLLGEGCVGKTSLVLRYCENKFNDKHITTLQASFLTKKLNIGGK------- 53 Query: 64 KAFKVHLQLWDTAGQERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVRNWMSQLQANAYC 123 +V+L +WDTAGQERF +L ++RD+ G +L++D+T + SF V+NW+ +L+ Sbjct: 54 ---RVNLAIWDTAGQERFHALGPIYYRDSNGAILVYDITDEDSFQKVKNWVKELRKMLGN 110 Query: 124 ENPDIVLIGNKADLPDQREVNERQARELADKYGIPYFETSAATGQNVEKAVETLLDLIMK 183 E + ++GNK DL +R V+ ++A A+ G ++ TSA + +E+ L K Sbjct: 111 E-ICLCIVGNKIDLEKERHVSIQEAESYAESVGAKHYHTSAKQNKGIEELFLDL----CK 165 Query: 184 RMEQ 187 RM + Sbjct: 166 RMIE 169 >5LEF-A nrPDB Length = 191 Score = 194 bits (494), Expect = 2e-50, Method: Composition-based stats. Identities = 57/175 (32%), Positives = 94/175 (53%), Gaps = 11/175 (6%) Query: 4 GDYDYLIKLLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYNAQGPNGSSG 63 G+ KL+ LG+ VGKT+ + R+ + F+ + T+GIDF K + + Sbjct: 4 GNPLRKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDR------- 56 Query: 64 KAFKVHLQLWDTAGQERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVRNWMSQLQANAYC 123 V LQLWDTAG ERFRSL ++ RD+ ++++D+T+ SF W+ ++ Sbjct: 57 ---TVRLQLWDTAGLERFRSLIPSYIRDSTVAVVVYDITNVNSFQQTTKWIDDVRTERGS 113 Query: 124 ENPDIVLIGNKADLPDQREVNERQARELADKYGIPYFETSAATGQNVEKAVETLL 178 + I+L+GNK DL D+R+V+ + A + + + ETSA G NV++ + Sbjct: 114 -DVIIMLVGNKTDLADKRQVSIEEGERKAKELNVMFIETSAKAGYNVKQLFRRVA 167 >2GIL-A nrPDB Length = 162 Score = 194 bits (493), Expect = 3e-50, Method: Composition-based stats. Identities = 57/169 (33%), Positives = 93/169 (55%), Gaps = 11/169 (6%) Query: 10 IKLLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYNAQGPNGSSGKAFKVH 69 KL+ LG+ VGKT+ + R+ + F+ + T+GIDF K + + V Sbjct: 2 FKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDR----------TVR 51 Query: 70 LQLWDTAGQERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVRNWMSQLQANAYCENPDIV 129 LQLWDTAGQERFRSL ++ RD+ ++++D+T+ SF W+ ++ + I+ Sbjct: 52 LQLWDTAGQERFRSLIPSYIRDSTVAVVVYDITNVNSFQQTTKWIDDVRTERGS-DVIIM 110 Query: 130 LIGNKADLPDQREVNERQARELADKYGIPYFETSAATGQNVEKAVETLL 178 L+GNK DL D+R+V+ + A + + + ETSA G NV++ + Sbjct: 111 LVGNKTDLADKRQVSIEEGERKAKELNVMFIETSAKAGYNVKQLFRRVA 159 >1ZC4-A nrPDB Length = 175 Score = 193 bits (490), Expect = 6e-50, Method: Composition-based stats. Identities = 54/179 (30%), Positives = 95/179 (53%), Gaps = 11/179 (6%) Query: 9 LIKLLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYNAQGPNGSSGKAFKV 68 L K++ +G GVGK+ ++ ++F + T +R K+VV + + +V Sbjct: 6 LHKVIMVGSGGVGKSALTLQFMYDEFVEDYEPTKADSYR-KKVVLDGE----------EV 54 Query: 69 HLQLWDTAGQERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVRNWMSQLQANAYCENPDI 128 + + DTAG E + ++ +FR GFL +F +T +SF ++ Q+ EN Sbjct: 55 QIDILDTAGLEDYAAIRDNYFRSGEGFLCVFSITEMESFAATADFREQILRVKEDENVPF 114 Query: 129 VLIGNKADLPDQREVNERQARELADKYGIPYFETSAATGQNVEKAVETLLDLIMKRMEQ 187 +L+GNK+DL D+R+V+ +A+ A+++ + Y ETSA T NV+K L+ I R + Sbjct: 115 LLVGNKSDLEDKRQVSVEEAKNRAEQWNVNYVETSAKTRANVDKVFFDLMREIRARKME 173 >4PHF-A nrPDB Length = 184 Score = 193 bits (490), Expect = 7e-50, Method: Composition-based stats. Identities = 66/181 (36%), Positives = 109/181 (60%), Gaps = 14/181 (7%) Query: 9 LIKLLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYNAQGPNGSSGKAFKV 68 ++K++ LGDSGVGKT+ ++RY ++K++ ++ T+G DF K V + Sbjct: 10 ILKVIILGDSGVGKTSLMHRYVNDKYSCQYKATIGADFLTKEVTVDGDKVA--------- 60 Query: 69 HLQLWDTAGQERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVRNWMSQLQANAYCENP-- 126 +Q+WDTAGQERF+SL AF+R A +L++D+T+ SF N+++W + +A +P Sbjct: 61 TMQVWDTAGQERFQSLGVAFYRGADCCVLVYDVTNASSFENIKSWRDEFLVHANVNSPET 120 Query: 127 -DIVLIGNKADLPDQRE-VNERQARELADKYG-IPYFETSAATGQNVEKAVETLLDLIMK 183 V++GNK D + ++ V+E+ A+ELA G IP F TSA NV+ A E + ++ Sbjct: 121 FPFVILGNKIDAEESKKIVSEKSAQELAKSLGDIPLFLTSAKNAINVDTAFEEIARSALQ 180 Query: 184 R 184 + Sbjct: 181 Q 181 >4M8N-E nrPDB Length = 199 Score = 192 bits (488), Expect = 1e-49, Method: Composition-based stats. Identities = 50/179 (27%), Positives = 94/179 (52%), Gaps = 12/179 (6%) Query: 4 GDYDYLIKLLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYNAQGPNGSSG 63 G + KL+ LG GVGK+ ++ F K+ T+ +R K+V +AQ Sbjct: 1 GPHMREYKLVVLGSGGVGKSALTVQFVQGIFVEKYDPTIEDSYR-KQVEVDAQ------- 52 Query: 64 KAFKVHLQLWDTAGQERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVRNWMSQLQANAYC 123 + L++ DTAG E+F ++ + ++ GF L++ +T+Q +F ++++ Q+ Sbjct: 53 ---QCMLEILDTAGTEQFTAMRDLYMKNGQGFALVYSITAQSTFNDLQDLREQILRVKDT 109 Query: 124 ENPDIVLIGNKADLPDQREVNERQARELADKY-GIPYFETSAATGQNVEKAVETLLDLI 181 ++ ++L+GNK DL D+R V + Q + LA ++ + E+SA + NV + L+ I Sbjct: 110 DDVPMILVGNKCDLEDERVVGKEQGQNLARQWNNCAFLESSAKSKINVNEIFYDLVRQI 168 >4CZ2-A nrPDB Length = 230 Score = 191 bits (485), Expect = 2e-49, Method: Composition-based stats. Identities = 65/220 (29%), Positives = 109/220 (49%), Gaps = 20/220 (9%) Query: 4 GDYDYLIKLLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYNAQGPNGSSG 63 ++L K+L +G+ GVGKT+ + RY F+ + T+G+DF K + ++++ Sbjct: 25 ETREHLFKVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVLNWDSR------- 77 Query: 64 KAFKVHLQLWDTAGQERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVRNWMSQLQANAYC 123 V LQLWD AG ERF ++T ++++AMG ++FD++ +F V W S L + + Sbjct: 78 --TLVRLQLWDIAGLERFGNMTRVYYKEAMGAFVVFDISRSSTFEAVLKWKSDLDSKVHL 135 Query: 124 EN---PDIVLIGNKADLPDQREVNERQARELADKYGIP-YFETSAATGQNVEKAVETLLD 179 N VL+ NK D ++ Q + ++G +FETSA N+E+A L++ Sbjct: 136 PNGSPIPAVLLANKCDQNKDSSMSPSQMDQFCKEHGFAGWFETSAKDNINIEEAARFLVE 195 Query: 180 LIMKRMEQCVEKTQIPDTVNGGNSGNLDGEK-PPEKKCIC 218 ++ V P+ N + LD E E K C Sbjct: 196 KML------VNHQSFPNEENDVDKIKLDQETLRAENKSQC 229 >5YOZ-A nrPDB Length = 177 Score = 190 bits (484), Expect = 3e-49, Method: Composition-based stats. Identities = 59/169 (34%), Positives = 95/169 (56%), Gaps = 12/169 (7%) Query: 11 KLLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYNAQGPNGSSGKAFKVHL 70 K++ LG+SG GK++ R+T N+F TT+G F K V+ + + + Sbjct: 17 KIVMLGESGAGKSSIALRFTRNEFLANQETTIGAAFLSKTVMIDGRA----------LKY 66 Query: 71 QLWDTAGQERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVRNWMSQLQANAYCENPDIVL 130 ++WDTAG ERFRSL ++R A G L+++D+T+ +S + W+ +L+ANA + IVL Sbjct: 67 EIWDTAGLERFRSLAPIYYRGASGALVVYDITNSESLKKAQTWIKELRANAD-PSLIIVL 125 Query: 131 IGNKADLPDQREVNERQAREL-ADKYGIPYFETSAATGQNVEKAVETLL 178 +GNK DL R+V+ + L A++ ++E SA NVE+ L Sbjct: 126 VGNKKDLGSLRQVSFEDGQRLAAEEQLAAFYEASAKDNNNVEQVFLDLA 174 >2P5S-A nrPDB Length = 199 Score = 189 bits (480), Expect = 9e-49, Method: Composition-based stats. Identities = 71/181 (39%), Positives = 107/181 (59%), Gaps = 17/181 (9%) Query: 10 IKLLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYNAQGPNGSSGKAFKVH 69 K++ GD+ VGK++FL R N+F T+G+DF+ K ++ + + + Sbjct: 29 YKIVLAGDAAVGKSSFLMRLCKNEFRENISATLGVDFQMKTLIVDGE----------RTV 78 Query: 70 LQLWDTAGQERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVRNWMSQLQANAYCENPDIV 129 LQLWDTAGQERFRS+ ++FR A G LL++D+T ++SFLN+R W+ ++ A+ E I+ Sbjct: 79 LQLWDTAGQERFRSIAKSYFRKADGVLLLYDVTCEKSFLNIREWVDMIEDAAH-ETVPIM 137 Query: 130 LIGNKADLPD------QREVNERQARELADKYGIPYFETSAATGQNVEKAVETLLDLIMK 183 L+GNKAD+ D Q+ V +LA YG + ETSA G N+ +AV L + K Sbjct: 138 LVGNKADIRDTAATEGQKCVPGHFGEKLAMTYGALFCETSAKDGSNIVEAVLHLAREVKK 197 Query: 184 R 184 R Sbjct: 198 R 198 >2KE5-A nrPDB Length = 174 Score = 188 bits (478), Expect = 2e-48, Method: Composition-based stats. Identities = 55/182 (30%), Positives = 98/182 (53%), Gaps = 13/182 (7%) Query: 9 LIKLLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYNAQGPNGSSGKAFKV 68 L K++ +G GVGK+ ++ ++F + T +R K+VV + + +V Sbjct: 3 LHKVIMVGSGGVGKSALTLQFMYDEFVEDYEPTKADSYR-KKVVLDGE----------EV 51 Query: 69 HLQLWDTAGQERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVRNWMSQLQA-NAYCENPD 127 + + DTAG E + ++ +FR GFLL+F +T +SF + Q+ A + Sbjct: 52 QIDILDTAGLEDYAAIRDNYFRSGEGFLLVFSITEHESFTATAEFREQILRVKAEEDKIP 111 Query: 128 IVLIGNKADLPDQREVNERQARELADKYGIPYFETSAATGQNVEKAVETLLDLIM-KRME 186 ++++GNK+DL ++R+V +AR A+++G+ Y ETSA T NV+K L+ I K+M Sbjct: 112 LLVVGNKSDLEERRQVPVEEARSKAEEWGVQYVETSAKTRANVDKVFFDLMREIRTKKMS 171 Query: 187 QC 188 + Sbjct: 172 EN 173 >2WBL-C nrPDB Length = 180 Score = 187 bits (474), Expect = 4e-48, Method: Composition-based stats. Identities = 62/188 (32%), Positives = 89/188 (47%), Gaps = 25/188 (13%) Query: 8 YLIKLLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYNAQGPNGSSGKAFK 67 IK + +GD VGKT L YT N F ++ TV +F VV Sbjct: 5 RFIKCVTVGDGAVGKTCMLISYTGNTFPTDYVPTVFDNFSANVVV-----------DGST 53 Query: 68 VHLQLWDTAGQERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNV-RNWMSQLQANAYCENP 126 V+L LWDTAGQE + L +R A FLL F L S+ S+ N+ + W+ +L+ Y Sbjct: 54 VNLGLWDTAGQEDYNRLRPLSYRGADVFLLAFSLISKASYENIHKKWLPELK--HYAPGI 111 Query: 127 DIVLIGNKADLPDQRE----------VNERQARELADKYG-IPYFETSAATGQNVEKAVE 175 IVL+G K DL D ++ + Q EL G + Y E S+ T QNV+ + Sbjct: 112 PIVLVGTKLDLRDDKQFLKDHPGAASITTAQGEELRKMIGAVRYLECSSKTQQNVKAVFD 171 Query: 176 TLLDLIMK 183 T + + ++ Sbjct: 172 TAIRVALR 179 >3BWD-D nrPDB Length = 182 Score = 187 bits (474), Expect = 5e-48, Method: Composition-based stats. Identities = 60/188 (31%), Positives = 89/188 (47%), Gaps = 25/188 (13%) Query: 8 YLIKLLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYNAQGPNGSSGKAFK 67 IK + +GD VGKT L YT N F ++ TV +F VV Sbjct: 7 RFIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVV-----------NGAT 55 Query: 68 VHLQLWDTAGQERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNV-RNWMSQLQANAYCENP 126 V+L LWDTAGQE + L +R A F+L F L S+ S+ NV + W+ +L+ Y Sbjct: 56 VNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELK--HYAPGV 113 Query: 127 DIVLIGNKADLPDQRE----------VNERQARELADKYGIP-YFETSAATGQNVEKAVE 175 IVL+G K DL D ++ + Q EL G P Y E S+ + +NV+ + Sbjct: 114 PIVLVGTKLDLRDDKQFFIDHPGAVPITTVQGEELKKLIGAPAYIECSSKSQENVKGVFD 173 Query: 176 TLLDLIMK 183 + ++++ Sbjct: 174 AAIRVVLQ 181 >2J0V-A nrPDB Length = 212 Score = 186 bits (473), Expect = 6e-48, Method: Composition-based stats. Identities = 65/192 (33%), Positives = 93/192 (48%), Gaps = 23/192 (11%) Query: 2 TDGDYDYLIKLLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYNAQGPNGS 61 + IK + +GD VGKT L YT NKF +I TV +F V + Q Sbjct: 2 SHMSVSKFIKCVTVGDGAVGKTCMLICYTSNKFPTDYIPTVFDNFSAN-VAVDGQI---- 56 Query: 62 SGKAFKVHLQLWDTAGQERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNV-RNWMSQLQAN 120 V+L LWDTAGQE + L +R A F+L F L S+ S+ NV + WM +L+ Sbjct: 57 ------VNLGLWDTAGQEDYSRLRPLSYRGADIFVLAFSLISKASYENVLKKWMPELRR- 109 Query: 121 AYCENPDIVLIGNKADLPDQR--------EVNERQARELADKYG-IPYFETSAATGQNVE 171 + N IVL+G K DL D + + Q EL + G Y E S+ T QNV+ Sbjct: 110 -FAPNVPIVLVGTKLDLRDDKGYLADHTNVITSTQGEELRKQIGAAAYIECSSKTQQNVK 168 Query: 172 KAVETLLDLIMK 183 +T + ++++ Sbjct: 169 AVFDTAIKVVLQ 180 >4DXA-A nrPDB Length = 169 Score = 186 bits (472), Expect = 7e-48, Method: Composition-based stats. Identities = 49/175 (28%), Positives = 93/175 (53%), Gaps = 12/175 (6%) Query: 10 IKLLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYNAQGPNGSSGKAFKVH 69 KL+ LG GVGK+ ++ F K+ T+ +R K+V +AQ + Sbjct: 6 YKLVVLGSVGVGKSALTVQFVQGIFVEKYDPTIEDSYR-KQVEVDAQ----------QCM 54 Query: 70 LQLWDTAGQERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVRNWMSQLQANAYCENPDIV 129 L++ DTAG E+F ++ + ++ GF L++ +T+Q +F ++++ Q+ ++ ++ Sbjct: 55 LEILDTAGTEQFTAMRDLYMKNGQGFALVYSITAQSTFNDLQDLREQILRVKDTDDVPMI 114 Query: 130 LIGNKADLPDQREVNERQARELADKY-GIPYFETSAATGQNVEKAVETLLDLIMK 183 L+GNK DL D+R V + Q + LA ++ + E+SA + NV + L+ I + Sbjct: 115 LVGNKCDLEDERVVGKEQGQNLARQWNNCAFLESSAKSKINVNEIFYDLVRQINR 169 >5C2K-A nrPDB Length = 415 Score = 185 bits (471), Expect = 9e-48, Method: Composition-based stats. Identities = 50/187 (26%), Positives = 84/187 (44%), Gaps = 27/187 (14%) Query: 11 KLLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYNAQGPNGSSGKAFKVHL 70 KL+ +GD GKT L ++ ++F ++ TV ++ + + + +V L Sbjct: 14 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENY-VADIEVDGK----------QVEL 62 Query: 71 QLWDTAGQERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVRN-WMSQLQANAYCENPDIV 129 LWDTAGQE + L + D L+ F + S S N+ W +++ +C N I+ Sbjct: 63 ALWDTAGQEDYDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVK--HFCPNVPII 120 Query: 130 LIGNKADLPD------------QREVNERQARELADKYG-IPYFETSAATGQNVEKAVET 176 L+GNK DL + Q V + R++A++ G Y E SA T V + E Sbjct: 121 LVGNKKDLRNDEHTRRELAKMKQEPVKPEEGRDMANRIGAFGYMECSAKTKDGVREVFEM 180 Query: 177 LLDLIMK 183 ++ Sbjct: 181 ATRAALQ 187 >2NTY-C nrPDB Length = 180 Score = 185 bits (471), Expect = 1e-47, Method: Composition-based stats. Identities = 61/188 (32%), Positives = 89/188 (47%), Gaps = 25/188 (13%) Query: 8 YLIKLLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYNAQGPNGSSGKAFK 67 IK + +GD VGKT L YT N F ++ TV +F VV Sbjct: 5 RFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVV-----------DGNT 53 Query: 68 VHLQLWDTAGQERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNV-RNWMSQLQANAYCENP 126 V+L LWDTAGQE + L +R A F+L F L S+ S+ NV + W+ +L+ Y Sbjct: 54 VNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVAKKWIPELR--HYAPGV 111 Query: 127 DIVLIGNKADLPDQRE----------VNERQARELADKYGIP-YFETSAATGQNVEKAVE 175 I+L+G K DL D ++ + Q EL G P Y E S+ T QNV+ + Sbjct: 112 PIILVGTKLDLRDDKQFFIDHPGAVPITTNQGEELKKLIGSPIYIECSSKTQQNVKAVFD 171 Query: 176 TLLDLIMK 183 + ++++ Sbjct: 172 AAIKVVLQ 179 >5ZHX-e nrPDB Length = 198 Score = 184 bits (467), Expect = 3e-47, Method: Composition-based stats. Identities = 50/187 (26%), Positives = 84/187 (44%), Gaps = 27/187 (14%) Query: 11 KLLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYNAQGPNGSSGKAFKVHL 70 KL+ +GD GKT L ++ ++F ++ TV ++ + + + +V L Sbjct: 12 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENY-VADIEVDGK----------QVEL 60 Query: 71 QLWDTAGQERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVRN-WMSQLQANAYCENPDIV 129 LWDTAGQE + L + D L+ F + S S N+ W +++ +C N I+ Sbjct: 61 ALWDTAGQEDYDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVK--HFCPNVPII 118 Query: 130 LIGNKADLPD------------QREVNERQARELADKYG-IPYFETSAATGQNVEKAVET 176 L+GNK DL + Q V + R++A++ G Y E SA T V + E Sbjct: 119 LVGNKKDLRNDEHTRRELAKMKQEPVKPEEGRDMANRIGAFGYMECSAKTKDGVREVFEM 178 Query: 177 LLDLIMK 183 ++ Sbjct: 179 ATRAALQ 185 >3RYT-C nrPDB Length = 180 Score = 183 bits (466), Expect = 4e-47, Method: Composition-based stats. Identities = 56/193 (29%), Positives = 88/193 (45%), Gaps = 27/193 (13%) Query: 4 GDYDYLIKLLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYNAQGPNGSSG 63 G + IK + +GD VGKT L YT N F ++I TV ++ V+ + + Sbjct: 1 GPHMQAIKCVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSAN-VMVDGK------- 52 Query: 64 KAFKVHLQLWDTAGQERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVR-NWMSQLQANAY 122 V+L LWDTAG E + L + FL+ F L S SF NVR W +++ + Sbjct: 53 ---PVNLGLWDTAGLEDYDRLRPLSYPQTDVFLICFSLVSPASFENVRAKWYPEVR--HH 107 Query: 123 CENPDIVLIGNKADLPDQR------------EVNERQARELADKYG-IPYFETSAATGQN 169 C N I+L+G K DL D + + Q +A + G + Y E SA T + Sbjct: 108 CPNTPIILVGTKLDLRDDKDTIEKLKEKKLTPITYPQGLAMAKEIGAVKYLECSALTQRG 167 Query: 170 VEKAVETLLDLIM 182 ++ + + ++ Sbjct: 168 LKTVFDEAIRAVL 180 >3TH5-A nrPDB Length = 204 Score = 183 bits (465), Expect = 5e-47, Method: Composition-based stats. Identities = 56/187 (29%), Positives = 87/187 (46%), Gaps = 27/187 (14%) Query: 10 IKLLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYNAQGPNGSSGKAFKVH 69 IK + +GD VGKT L YT N F ++I TV ++ V+ + + V+ Sbjct: 31 IKCVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSAN-VMVDGK----------PVN 79 Query: 70 LQLWDTAGQERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVR-NWMSQLQANAYCENPDI 128 L LWDTAGQE + L + FL+ F L S SF NVR W +++ +C N I Sbjct: 80 LGLWDTAGQEDYDRLRPLSYPQTDVFLICFSLVSPASFENVRAKWYPEVR--HHCPNTPI 137 Query: 129 VLIGNKADLPDQR------------EVNERQARELADKYG-IPYFETSAATGQNVEKAVE 175 +L+G K DL D + + Q +A + G + Y E SA T + ++ + Sbjct: 138 ILVGTKLDLRDDKDTIEKLKEKKLTPITYPQGLAMAKEIGAVKYLECSALTQRGLKTVFD 197 Query: 176 TLLDLIM 182 + ++ Sbjct: 198 EAIRAVL 204 >4KU4-A nrPDB Length = 206 Score = 183 bits (464), Expect = 6e-47, Method: Composition-based stats. Identities = 55/211 (26%), Positives = 96/211 (45%), Gaps = 29/211 (13%) Query: 1 MTDGDYDYLIKLLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYNAQGPNG 60 ++ G K+ LG+ GVGKT+ T + F+ + T+ +R + V+ Sbjct: 6 LSPGAGKITDKIAMLGEGGVGKTSLTVNLTKHVFSETYDPTLEDSYRRQCVI-------- 57 Query: 61 SSGKAFKVHLQLWDTAGQERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVRNWMSQLQA- 119 HL++ DTAGQE + +L + R F+++FD+T + SF ++ Sbjct: 58 ---DGIPSHLEILDTAGQEEYGALREQWIRQNELFVIVFDVTRRSSFEAAERLFEEVIQT 114 Query: 120 ------------NAYCENPD-----IVLIGNKADLPDQREVNERQARELADKYGIPYFET 162 + + ++ +VL+GNK DL +REV + LA K G + ET Sbjct: 115 KRKLDETRRHPGDRHPDDLPFAPSLVVLVGNKCDLDTRREVGTLEGSSLAKKLGCGFVET 174 Query: 163 SAATGQNVEKAVETLLDLIMKRMEQCVEKTQ 193 SA G NVE+A +++ +R + ++ Q Sbjct: 175 SAKLGTNVEEAFFSVVRADRRRKREVTDEEQ 205 >1Z22-A nrPDB Length = 168 Score = 182 bits (463), Expect = 8e-47, Method: Composition-based stats. Identities = 51/175 (29%), Positives = 91/175 (52%), Gaps = 12/175 (6%) Query: 10 IKLLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYNAQGPNGSSGKAFKVH 69 IK++ +G+ VGK++ + RY F + T+G+DF E+++ N + V Sbjct: 6 IKMVVVGNGAVGKSSMIQRYCKGIFTKDYKKTIGVDFLERQIQVNDED----------VR 55 Query: 70 LQLWDTAGQERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVRNWMSQLQANAYCENPDIV 129 L LWDTAGQE F ++T A++R A +L+F T ++SF + +W ++ A + Sbjct: 56 LMLWDTAGQEEFDAITKAYYRGAQACVLVFSTTDRESFEAISSWREKV--VAEVGDIPTA 113 Query: 130 LIGNKADLPDQREVNERQARELADKYGIPYFETSAATGQNVEKAVETLLDLIMKR 184 L+ NK DL D + +A LA + + ++ TS NV + + L + +++ Sbjct: 114 LVQNKIDLLDDSCIKNEEAEGLAKRLKLRFYRTSVKEDLNVSEVFKYLAEKHLQK 168 >5JCP-B nrPDB Length = 419 Score = 181 bits (460), Expect = 2e-46, Method: Composition-based stats. Identities = 50/187 (26%), Positives = 83/187 (44%), Gaps = 27/187 (14%) Query: 11 KLLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYNAQGPNGSSGKAFKVHL 70 KL+ +GD GKT L + ++F ++ TV ++ + + + +V L Sbjct: 245 KLVIVGDGACGKTCLLIVNSKDQFPEVYVPTVFENY-VADIEVDGK----------QVEL 293 Query: 71 QLWDTAGQERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVRN-WMSQLQANAYCENPDIV 129 LWDTAGQE + L + D L+ F + S S N+ W +++ +C N I+ Sbjct: 294 ALWDTAGQEDYDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVK--HFCPNVPII 351 Query: 130 LIGNKADLPD------------QREVNERQARELADKYG-IPYFETSAATGQNVEKAVET 176 L+GNK DL + Q V + R++A++ G Y E SA T V + E Sbjct: 352 LVGNKKDLRNDEHTRRELAKMKQEPVKPEEGRDMANRIGAFGYMECSAKTKDGVREVFEM 411 Query: 177 LLDLIMK 183 ++ Sbjct: 412 ATRAALQ 418 >2J1L-A nrPDB Length = 214 Score = 181 bits (459), Expect = 3e-46, Method: Composition-based stats. Identities = 53/188 (28%), Positives = 83/188 (44%), Gaps = 27/188 (14%) Query: 10 IKLLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYNAQGPNGSSGKAFKVH 69 +K++ +GD G GKT+ L + D F + TV + K VH Sbjct: 35 VKVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMV-----------NLQVKGKPVH 83 Query: 70 LQLWDTAGQERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNV-RNWMSQLQANAYCENPDI 128 L +WDTAGQ+ + L F+ DA LL FD+TS SF N+ W ++ N +C+ I Sbjct: 84 LHIWDTAGQDDYDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEV--NHFCKKVPI 141 Query: 129 VLIGNKADLPDQR------------EVNERQARELADKYG-IPYFETSAATGQNVEKAVE 175 +++G K DL + V + +E+A G + Y E SA NV + Sbjct: 142 IVVGCKTDLRKDKSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNVHAVFQ 201 Query: 176 TLLDLIMK 183 ++ + Sbjct: 202 EAAEVALS 209 >2ERX-A nrPDB Length = 172 Score = 179 bits (455), Expect = 6e-46, Method: Composition-based stats. Identities = 48/176 (27%), Positives = 80/176 (45%), Gaps = 12/176 (6%) Query: 10 IKLLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYNAQGPNGSSGKAFKVH 69 ++ G GVGK++ + R+ F +I TV +R S Sbjct: 4 YRVAVFGAGGVGKSSLVLRFVKGTFRESYIPTVEDTYR-----------QVISCDKSICT 52 Query: 70 LQLWDTAGQERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVRNWMSQL-QANAYCENPDI 128 LQ+ DT G +F ++ F+L++ +TS+QS ++ Q+ + E+ I Sbjct: 53 LQITDTTGSHQFPAMQRLSISKGHAFILVYSITSRQSLEELKPIYEQICEIKGDVESIPI 112 Query: 129 VLIGNKADLPDQREVNERQARELADKYGIPYFETSAATGQNVEKAVETLLDLIMKR 184 +L+GNK D REV +A LA + + ETSA NV++ + LL+L +R Sbjct: 113 MLVGNKCDESPSREVQSSEAEALARTWKCAFMETSAKLNHNVKELFQELLNLEKRR 168 >4WA7-A nrPDB Length = 170 Score = 179 bits (455), Expect = 7e-46, Method: Composition-based stats. Identities = 54/166 (32%), Positives = 89/166 (53%), Gaps = 12/166 (7%) Query: 22 KTTFLYRYTDNKFNPKFITTVGIDFREKRVVYNAQGPNGSSGKAFKVHLQLWDTAGQERF 81 K+ + N F ++ T+ +R K+VV + + L + DTAG E + Sbjct: 17 KSALTIQLIQNHFVDEYDPTIEDSYR-KQVVIDGE----------TCLLDILDTAGLEEY 65 Query: 82 RSLTTAFFRDAMGFLLMFDLTSQQSFLNVRNWMSQLQANAYCENPDIVLIGNKADLPDQR 141 ++ + R GFL +F + + +SF ++ ++ Q++ E+ +VL+GNK DLP R Sbjct: 66 SAMRDQYMRTGEGFLCVFAINNTKSFEDIHHYREQIKRVKDSEDVPMVLVGNKCDLP-SR 124 Query: 142 EVNERQARELADKYGIPYFETSAATGQNVEKAVETLLDLIMKRMEQ 187 V+ +QA++LA YGIP+ ETSA T Q V+ A TL+ I K E+ Sbjct: 125 TVDTKQAQDLARSYGIPFIETSAKTRQGVDDAFYTLVREIRKHKEK 170 >4U5X-A nrPDB Length = 178 Score = 179 bits (455), Expect = 7e-46, Method: Composition-based stats. Identities = 59/188 (31%), Positives = 89/188 (47%), Gaps = 25/188 (13%) Query: 8 YLIKLLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYNAQGPNGSSGKAFK 67 IK + +GD VGKT L YT NKF +I TV +F V + Sbjct: 4 RFIKCVTVGDGAVGKTCMLICYTSNKFPTDYIPTVFDNFSAN-VSVDGSV---------- 52 Query: 68 VHLQLWDTAGQERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNV-RNWMSQLQANAYCENP 126 V+L LWDTAG E + L +R A F+L F L S+ S+ NV + WM +L+ + Sbjct: 53 VNLGLWDTAGLEDYSRLRPLSYRGADVFILSFSLISRASYENVQKKWMPELRR--FAPGV 110 Query: 127 DIVLIGNKADLPDQRE----------VNERQARELADKYG-IPYFETSAATGQNVEKAVE 175 +VL+G K DL + R + Q EL G + Y E S+ T +N++ + Sbjct: 111 PVVLVGTKLDLREDRAYLADHPASSIITTEQGEELRKLIGAVAYIECSSKTQRNIKAVFD 170 Query: 176 TLLDLIMK 183 T + ++++ Sbjct: 171 TAIKVVLQ 178 >2N1B-A nrPDB Length = 261 Score = 178 bits (453), Expect = 1e-45, Method: Composition-based stats. Identities = 58/180 (32%), Positives = 88/180 (48%), Gaps = 14/180 (7%) Query: 2 TDGDYDYLIKLLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYNAQGPNGS 61 G+ KL+ +GD G GKTTF+ R+ +F K++ T+G++ P Sbjct: 44 AQGEPQVQFKLVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVH----------PLVF 93 Query: 62 SGKAFKVHLQLWDTAGQERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVRNWMSQLQANA 121 + +WDTAGQE+F L ++ A ++MFD+TS+ ++ NV NW L Sbjct: 94 HTNRGPIKFNVWDTAGQEKFGGLRDGYYIQAQCAIIMFDVTSRVTYKNVPNWHRDLVRV- 152 Query: 122 YCENPDIVLIGNKADLPDQREVNERQARELADKYGIPYFETSAATGQNVEKAVETLLDLI 181 CEN IVL GNK D+ D R+V + K + Y++ SA + N EK L + Sbjct: 153 -CENIPIVLCGNKVDIKD-RKVKAKSIV-FHRKKNLQYYDISAKSNYNFEKPFLWLARKL 209 >5WDR-A nrPDB Length = 171 Score = 178 bits (453), Expect = 1e-45, Method: Composition-based stats. Identities = 46/162 (28%), Positives = 77/162 (47%), Gaps = 11/162 (6%) Query: 22 KTTFLYRYTDNKFNPKFITTVGIDFREKRVVYNAQGPNGSSGKAFKVHLQLWDTAGQERF 81 K+ + F ++ T+ +R K V + + L + DTAGQE + Sbjct: 20 KSALTIQLIQQHFVTEYDPTIEDSYR-KHVSIDDEA----------CLLDILDTAGQEDY 68 Query: 82 RSLTTAFFRDAMGFLLMFDLTSQQSFLNVRNWMSQLQANAYCENPDIVLIGNKADLPDQR 141 ++ + R GFL ++ + SQQS + ++ Q+ + ++L+GNK DL + R Sbjct: 69 SAMRDQYMRTGEGFLCVYSIDSQQSLDEIHSFREQILRVKDQDEVPMILVGNKCDLEEHR 128 Query: 142 EVNERQARELADKYGIPYFETSAATGQNVEKAVETLLDLIMK 183 EV+ + +A Y IP+ ETSA NVE+A L+ I K Sbjct: 129 EVSTEAGQAVAKSYSIPFMETSAKKRINVEEAFYQLVREIRK 170 >2FV8-A nrPDB Length = 207 Score = 178 bits (453), Expect = 1e-45, Method: Composition-based stats. Identities = 51/200 (25%), Positives = 86/200 (43%), Gaps = 30/200 (15%) Query: 2 TDGDYDYLI---KLLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYNAQGP 58 T+ Y + KL+ +GD GKT L ++ ++F ++ TV ++ + + + Sbjct: 15 TENLYFQSMIRKKLVVVGDGACGKTCLLIVFSKDEFPEVYVPTVFENY-VADIEVDGK-- 71 Query: 59 NGSSGKAFKVHLQLWDTAGQERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVRN-WMSQL 117 +V L LWDTAGQE + L + D L+ F + S S N+ W+ ++ Sbjct: 72 --------QVELALWDTAGQEDYDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWVPEV 123 Query: 118 QANAYCENPDIVLIGNKADLP------------DQREVNERQARELADKY-GIPYFETSA 164 + +C N I+L+ NK DL Q V R +A + Y E SA Sbjct: 124 K--HFCPNVPIILVANKKDLRSDEHVRTELARMKQEPVRTDDGRAMAVRIQAYDYLECSA 181 Query: 165 ATGQNVEKAVETLLDLIMKR 184 T + V + ET +++ Sbjct: 182 KTKEGVREVFETATRAALQK 201 >2ATX-A nrPDB Length = 194 Score = 178 bits (452), Expect = 2e-45, Method: Composition-based stats. Identities = 51/196 (26%), Positives = 86/196 (43%), Gaps = 27/196 (13%) Query: 1 MTDGDYDYLIKLLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYNAQGPNG 60 M G ++K + +GD VGKT L Y ++ F +++ TV + V Sbjct: 10 MAHGPGALMLKCVVVGDGAVGKTCLLMSYANDAFPEEYVPTVFDHYAVSVTV-------- 61 Query: 61 SSGKAFKVHLQLWDTAGQERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVR-NWMSQLQA 119 + L L+DTAGQE + L + FL+ F + + SF NV+ W+ +L+ Sbjct: 62 ---GGKQYLLGLYDTAGQEDYDRLRPLSYPMTDVFLICFSVVNPASFQNVKEEWVPELKE 118 Query: 120 NAYCENPDIVLIGNKADLPD------------QREVNERQARELADKYG-IPYFETSAAT 166 A N +LIG + DL D ++ + Q ++LA + G Y E SA T Sbjct: 119 YA--PNVPFLLIGTQIDLRDDPKTLARLNDMKEKPICVEQGQKLAKEIGACCYVECSALT 176 Query: 167 GQNVEKAVETLLDLIM 182 + ++ + + I+ Sbjct: 177 QKGLKTVFDEAIIAIL 192 >5UWI-A nrPDB Length = 237 Score = 178 bits (451), Expect = 2e-45, Method: Composition-based stats. Identities = 58/180 (32%), Positives = 88/180 (48%), Gaps = 14/180 (7%) Query: 2 TDGDYDYLIKLLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYNAQGPNGS 61 G+ KL+ +GD G GKTTF+ R+ +F K++ T+G++ P Sbjct: 24 AQGEPQVQFKLVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVH----------PLVF 73 Query: 62 SGKAFKVHLQLWDTAGQERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVRNWMSQLQANA 121 + +WDTAGQE+F L ++ A ++MFD+TS+ ++ NV NW L Sbjct: 74 HTNRGPIKFNVWDTAGQEKFGGLRDGYYIQAQCAIIMFDVTSRVTYKNVPNWHRDLVRV- 132 Query: 122 YCENPDIVLIGNKADLPDQREVNERQARELADKYGIPYFETSAATGQNVEKAVETLLDLI 181 CEN IVL GNK D+ D R+V + K + Y++ SA + N EK L + Sbjct: 133 -CENIPIVLCGNKVDIKD-RKVKAKSIV-FHRKKNLQYYDISAKSNYNFEKPFLWLARKL 189 >5CLL-A nrPDB Length = 191 Score = 178 bits (451), Expect = 2e-45, Method: Composition-based stats. Identities = 58/180 (32%), Positives = 88/180 (48%), Gaps = 14/180 (7%) Query: 2 TDGDYDYLIKLLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYNAQGPNGS 61 G+ KL+ +GD G GKTTF+ R+ +F K++ T+G++ P Sbjct: 3 AQGEPQVQFKLVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVH----------PLVF 52 Query: 62 SGKAFKVHLQLWDTAGQERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVRNWMSQLQANA 121 + +WDTAGQE+F L ++ A ++MFD+TS+ ++ NV NW L Sbjct: 53 HTNRGPIKFNVWDTAGQEKFGGLRDGYYIQAQCAIIMFDVTSRVTYKNVPNWHRDLVRV- 111 Query: 122 YCENPDIVLIGNKADLPDQREVNERQARELADKYGIPYFETSAATGQNVEKAVETLLDLI 181 CEN IVL GNK D+ D R+V + K + Y++ SA + N EK L + Sbjct: 112 -CENIPIVLCGNKVDIKD-RKVKAKSIV-FHRKKNLQYYDISAKSNYNFEKPFLWLARKL 168 >2ERY-A nrPDB Length = 172 Score = 177 bits (448), Expect = 4e-45, Method: Composition-based stats. Identities = 47/166 (28%), Positives = 82/166 (49%), Gaps = 11/166 (6%) Query: 22 KTTFLYRYTDNKFNPKFITTVGIDFREKRVVYNAQGPNGSSGKAFKVHLQLWDTAGQERF 81 K+ ++ + F + T+ + ++ V+ + L + DTAGQE F Sbjct: 18 KSALTIQFIQSYFVTDYDPTIEDSYTKQCVIDD-----------RAARLDILDTAGQEEF 66 Query: 82 RSLTTAFFRDAMGFLLMFDLTSQQSFLNVRNWMSQLQANAYCENPDIVLIGNKADLPDQR 141 ++ + R GFLL+F +T + SF + + Q+ + ++LIGNKADL QR Sbjct: 67 GAMREQYMRTGEGFLLVFSVTDRGSFEEIYKFQRQILRVKDRDEFPMILIGNKADLDHQR 126 Query: 142 EVNERQARELADKYGIPYFETSAATGQNVEKAVETLLDLIMKRMEQ 187 +V + + ++LA + + Y E SA NV++A L+ +I K EQ Sbjct: 127 QVTQEEGQQLARQLKVTYMEASAKIRMNVDQAFHELVRVIRKFQEQ 172 >2WKQ-A nrPDB Length = 332 Score = 177 bits (448), Expect = 5e-45, Method: Composition-based stats. Identities = 55/188 (29%), Positives = 87/188 (46%), Gaps = 27/188 (14%) Query: 9 LIKLLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYNAQGPNGSSGKAFKV 68 LIK + +GD VGKT L YT N F ++I TV ++ V+ + + V Sbjct: 155 LIKCVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSAN-VMVDGK----------PV 203 Query: 69 HLQLWDTAGQERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVR-NWMSQLQANAYCENPD 127 +L LWDTAG E + L + FL+ F L S SF +VR W +++ +C N Sbjct: 204 NLGLWDTAGLEDYDRLRPLSYPQTDVFLICFSLVSPASFHHVRAKWYPEVR--HHCPNTP 261 Query: 128 IVLIGNKADLPDQR------------EVNERQARELADKYG-IPYFETSAATGQNVEKAV 174 I+L+G K DL D + + Q +A + G + Y E SA T + ++ Sbjct: 262 IILVGTKLDLRDDKDTIEKLKEKKLTPITYPQGLAMAKEIGAVKYLECSALTQRGLKTVF 321 Query: 175 ETLLDLIM 182 + + ++ Sbjct: 322 DEAIRAVL 329 >6FF8-A nrPDB Length = 181 Score = 176 bits (447), Expect = 6e-45, Method: Composition-based stats. Identities = 56/183 (30%), Positives = 97/183 (53%), Gaps = 13/183 (7%) Query: 4 GDYDYLIKLLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYNAQGPNGSSG 63 ++L K+L +G+ GVGKT+ + RY F+ + T+G+DF K + ++++ Sbjct: 3 ETREHLFKVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVLNWDSR------- 55 Query: 64 KAFKVHLQLWDTAGQERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVRNWMSQLQANAYC 123 V LQLWD AG ERF ++T ++++A+G ++FD++ +F V W S L + + Sbjct: 56 --TLVRLQLWDIAGLERFGNMTRVYYKEAVGAFVVFDISRSSTFEAVLKWKSDLDSKVHL 113 Query: 124 EN---PDIVLIGNKADLPDQREVNERQARELADKYGIP-YFETSAATGQNVEKAVETLLD 179 N VL+ NK D + Q + ++G +FETSA N+E+A L++ Sbjct: 114 PNGSPIPAVLLANKCDQNKDSSQSPSQVDQFCKEHGFAGWFETSAKDNINIEEAARFLVE 173 Query: 180 LIM 182 I+ Sbjct: 174 KIL 176 >5WDQ-A nrPDB Length = 170 Score = 176 bits (446), Expect = 7e-45, Method: Composition-based stats. Identities = 53/163 (32%), Positives = 84/163 (51%), Gaps = 12/163 (7%) Query: 22 KTTFLYRYTDNKFNPKFITTVGIDFREKRVVYNAQGPNGSSGKAFKVHLQLWDTAGQERF 81 K+ + N F ++ T+ +R K+VV + + L + DTAGQE + Sbjct: 20 KSALTIQLIQNHFVDEYDPTIEDSYR-KQVVIDGE----------TCLLDILDTAGQEEY 68 Query: 82 RSLTTAFFRDAMGFLLMFDLTSQQSFLNVRNWMSQLQANAYCENPDIVLIGNKADLPDQR 141 ++ + R GFL +F + + +SF ++ + Q++ ++ +VL+GNK D R Sbjct: 69 SAMRDQYMRTGEGFLCVFAINNTKSFEDIHQYREQIKRVKDSDDVPMVLVGNKCD-AAAR 127 Query: 142 EVNERQARELADKYGIPYFETSAATGQNVEKAVETLLDLIMKR 184 V RQA++LA YGIPY ETSA T Q VE A TL+ I + Sbjct: 128 TVESRQAQDLARSYGIPYIETSAKTRQGVEDAFYTLVREIRQH 170 >3CON-A nrPDB Length = 190 Score = 175 bits (445), Expect = 1e-44, Method: Composition-based stats. Identities = 54/169 (31%), Positives = 88/169 (52%), Gaps = 12/169 (7%) Query: 22 KTTFLYRYTDNKFNPKFITTVGIDFREKRVVYNAQGPNGSSGKAFKVHLQLWDTAGQERF 81 K+ + N F ++ T+ +R K+VV + + L + DTAGQE + Sbjct: 34 KSALTIQLIQNHFVDEYDPTIEDSYR-KQVVIDGE----------TCLLDILDTAGQEEY 82 Query: 82 RSLTTAFFRDAMGFLLMFDLTSQQSFLNVRNWMSQLQANAYCENPDIVLIGNKADLPDQR 141 ++ + R GFL +F + + +SF ++ + Q++ ++ +VL+GNK DLP R Sbjct: 83 SAMRDQYMRTGEGFLCVFAINNSKSFADINLYREQIKRVKDSDDVPMVLVGNKCDLPT-R 141 Query: 142 EVNERQARELADKYGIPYFETSAATGQNVEKAVETLLDLIMKRMEQCVE 190 V+ +QA ELA YGIP+ ETSA T Q VE A TL+ I + + + Sbjct: 142 TVDTKQAHELAKSYGIPFIETSAKTRQGVEDAFYTLVREIRQYRMKKLN 190 >2W2X-A nrPDB Length = 185 Score = 175 bits (445), Expect = 1e-44, Method: Composition-based stats. Identities = 54/187 (28%), Positives = 85/187 (45%), Gaps = 27/187 (14%) Query: 10 IKLLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYNAQGPNGSSGKAFKVH 69 IK + +GD VGKT L YT N F ++I TV ++ +V + V+ Sbjct: 10 IKCVVVGDVAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMV-----------DSKPVN 58 Query: 70 LQLWDTAGQERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVR-NWMSQLQANAYCENPDI 128 L LWDTAGQE + L + FL+ F L S S+ NVR W +++ +C + I Sbjct: 59 LGLWDTAGQEDYDRLRPLSYPQTDVFLICFSLVSPASYENVRAKWFPEVR--HHCPSTPI 116 Query: 129 VLIGNKADLPDQR------------EVNERQARELADKYG-IPYFETSAATGQNVEKAVE 175 +L+G K DL D + + Q LA + + Y E SA T + ++ + Sbjct: 117 ILVGTKLDLRDDKDTIEKLKEKKLAPITYPQGLALAKEIDSVKYLECSALTQRGLKTVFD 176 Query: 176 TLLDLIM 182 + ++ Sbjct: 177 EAIRAVL 183 >3CBQ-A nrPDB Length = 195 Score = 175 bits (443), Expect = 2e-44, Method: Composition-based stats. Identities = 48/185 (25%), Positives = 83/185 (44%), Gaps = 15/185 (8%) Query: 3 DGDYDYLIKLLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYNAQGPNGSS 62 G D + K++ +G+SGVGK+T + + + D E+R++ + + Sbjct: 17 QGQKDGIFKVMLVGESGVGKSTLAGTFGGLQGDSAHEPENPEDTYERRIMVDKE------ 70 Query: 63 GKAFKVHLQLW---DTAGQERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVRNWMSQLQA 119 + V +W D G L + FL++F +T ++SF V + +L+A Sbjct: 71 -EVTLVVYDIWEQGDAGGW-----LRDHCLQTGDAFLIVFSVTDRRSFSKVPETLLRLRA 124 Query: 120 NAYCENPDIVLIGNKADLPDQREVNERQARELADKYGIPYFETSAATGQNVEKAVETLLD 179 + ++L+GNK+DL REV+ + R LA + ETSAA N + E + Sbjct: 125 GRPHHDLPVILVGNKSDLARSREVSLEEGRHLAGTLSCKHIETSAALHHNTRELFEGAVR 184 Query: 180 LIMKR 184 I R Sbjct: 185 QIRLR 189 >2FN4-A nrPDB Length = 181 Score = 174 bits (442), Expect = 2e-44, Method: Composition-based stats. Identities = 48/169 (28%), Positives = 77/169 (45%), Gaps = 11/169 (6%) Query: 22 KTTFLYRYTDNKFNPKFITTVGIDFREKRVVYNAQGPNGSSGKAFKVHLQLWDTAGQERF 81 K+ ++ + F + T+ + S L + DTAGQE F Sbjct: 22 KSALTIQFIQSYFVSDYDPTIEDSY-----------TKICSVDGIPARLDILDTAGQEEF 70 Query: 82 RSLTTAFFRDAMGFLLMFDLTSQQSFLNVRNWMSQLQANAYCENPDIVLIGNKADLPDQR 141 ++ + R GFLL+F + +QSF V +Q+ ++ +VL+GNKADL QR Sbjct: 71 GAMREQYMRAGHGFLLVFAINDRQSFNEVGKLFTQILRVKDRDDFPVVLVGNKADLESQR 130 Query: 142 EVNERQARELADKYGIPYFETSAATGQNVEKAVETLLDLIMKRMEQCVE 190 +V +A + + YFE SA NV++A E L+ + K EQ + Sbjct: 131 QVPRSEASAFGASHHVAYFEASAKLRLNVDEAFEQLVRAVRKYQEQELP 179 >5UHV-A nrPDB Length = 166 Score = 174 bits (441), Expect = 3e-44, Method: Composition-based stats. Identities = 54/162 (33%), Positives = 86/162 (53%), Gaps = 12/162 (7%) Query: 22 KTTFLYRYTDNKFNPKFITTVGIDFREKRVVYNAQGPNGSSGKAFKVHLQLWDTAGQERF 81 K+ + N F ++ T+ +R K+VV + + L + DTAGQE + Sbjct: 16 KSALTIQLIQNHFVDEYDPTIEDSYR-KQVVIDGE----------TCLLDILDTAGQEEY 64 Query: 82 RSLTTAFFRDAMGFLLMFDLTSQQSFLNVRNWMSQLQANAYCENPDIVLIGNKADLPDQR 141 ++ + R GFL +F + + +SF ++ + Q++ ++ +VL+GNK DLP R Sbjct: 65 SAMRDQYMRTGEGFLCVFAINNSKSFADINLYREQIKRVKDSDDVPMVLVGNKCDLPT-R 123 Query: 142 EVNERQARELADKYGIPYFETSAATGQNVEKAVETLLDLIMK 183 V+ +QA ELA YGIP+ ETSA T Q VE A TL+ I + Sbjct: 124 TVDTKQAHELAKSYGIPFIETSAKTRQGVEDAFYTLVREIRQ 165 >2CJW-A nrPDB Length = 192 Score = 174 bits (441), Expect = 3e-44, Method: Composition-based stats. Identities = 42/185 (22%), Positives = 85/185 (45%), Gaps = 12/185 (6%) Query: 10 IKLLALGDSGVGKTTFLYRY--TDNKFNPKFITTVGIDFREKRVVYNAQGPNGSSGKAFK 67 +++ +G+ GVGK+T + + + +G D E+ ++ + + A Sbjct: 7 YRVVLIGEQGVGKSTLANIFAGVHDSMDSD-CEVLGEDTYERTLMVDGE-------SATI 58 Query: 68 VHLQLWDTAGQERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVRNWMSQLQANAYCENPD 127 + L +W+ G+ + L + +L+++ +T + SF QL+ E+ Sbjct: 59 ILLDMWENKGENEW--LHDHCMQVGDAYLIVYSITDRASFEKASELRIQLRRARQTEDIP 116 Query: 128 IVLIGNKADLPDQREVNERQARELADKYGIPYFETSAATGQNVEKAVETLLDLIMKRMEQ 187 I+L+GNK+DL REV+ + R A + + ETSAA NV++ E ++ + R + Sbjct: 117 IILVGNKSDLVRCREVSVSEGRACAVVFDCKFIETSAAVQHNVKELFEGIVRQVRLRRDS 176 Query: 188 CVEKT 192 + Sbjct: 177 KEKNE 181 >2G3Y-A nrPDB Length = 211 Score = 173 bits (440), Expect = 4e-44, Method: Composition-based stats. Identities = 42/184 (22%), Positives = 85/184 (46%), Gaps = 12/184 (6%) Query: 10 IKLLALGDSGVGKTTFLYRY--TDNKFNPKFITTVGIDFREKRVVYNAQGPNGSSGKAFK 67 +++ +G+ GVGK+T + + + +G D E+ ++ + + A Sbjct: 38 YRVVLIGEQGVGKSTLANIFAGVHDSMDSD-CEVLGEDTYERTLMVDGE-------SATI 89 Query: 68 VHLQLWDTAGQERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVRNWMSQLQANAYCENPD 127 + L +W+ G+ + L + +L+++ +T + SF QL+ E+ Sbjct: 90 ILLDMWENKGENEW--LHDHCMQVGDAYLIVYSITDRASFEKASELRIQLRRARQTEDIP 147 Query: 128 IVLIGNKADLPDQREVNERQARELADKYGIPYFETSAATGQNVEKAVETLLDLIMKRMEQ 187 I+L+GNK+DL REV+ + R A + + ETSAA NV++ E ++ + R + Sbjct: 148 IILVGNKSDLVRCREVSVSEGRACAVVFDCKFIETSAAVQHNVKELFEGIVRQVRLRRDS 207 Query: 188 CVEK 191 + Sbjct: 208 KEKN 211 >4FMC-F nrPDB Length = 117 Score = 173 bits (438), Expect = 7e-44, Method: Composition-based stats. Identities = 50/126 (39%), Positives = 85/126 (67%), Gaps = 11/126 (8%) Query: 12 LLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYNAQGPNGSSGKAFKVHLQ 71 LL +GDSGVGK+ L R+ D+ + +I+T+G+DF+ + + + + + LQ Sbjct: 1 LLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGK----------TIKLQ 50 Query: 72 LWDTAGQERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVRNWMSQLQANAYCENPDIVLI 131 +WDTAGQERFR++T++++R A G ++++D+T Q+SF NV+ W+ ++ A EN + +L+ Sbjct: 51 IWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYA-SENVNKLLV 109 Query: 132 GNKADL 137 GNK DL Sbjct: 110 GNKCDL 115 >2ATV-A nrPDB Length = 196 Score = 172 bits (437), Expect = 8e-44, Method: Composition-based stats. Identities = 50/190 (26%), Positives = 89/190 (46%), Gaps = 19/190 (10%) Query: 2 TDGDYDYLI------KLLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYNA 55 T+ Y + KL G +GVGK+ + R+ +F ++ T+ +R + + + Sbjct: 15 TENLYFQSMAKSAEVKLAIFGRAGVGKSALVVRFLTKRFIWEYDPTLESTYRHQATIDDE 74 Query: 56 QGPNGSSGKAFKVHLQLWDTAGQERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVRNWMS 115 V +++ DTAGQE R GF+L++D+T + SF V + Sbjct: 75 -----------VVSMEILDTAGQED-TIQREGHMRWGEGFVLVYDITDRGSFEEVLPLKN 122 Query: 116 QLQANAYCENPDIVLIGNKADLPDQREVNERQARELADKYGIPYFETSAATGQ-NVEKAV 174 L +N ++L+GNKADL R+V+ + +LA + ++E SA TG+ N+ + Sbjct: 123 ILDEIKKPKNVTLILVGNKADLDHSRQVSTEEGEKLATELACAFYECSACTGEGNITEIF 182 Query: 175 ETLLDLIMKR 184 L + +R Sbjct: 183 YELCREVRRR 192 >3WYF-A nrPDB Length = 219 Score = 172 bits (437), Expect = 8e-44, Method: Composition-based stats. Identities = 56/173 (32%), Positives = 87/173 (50%), Gaps = 14/173 (8%) Query: 9 LIKLLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYNAQGPNGSSGKAFKV 68 KL+ +GD G GKTTF+ R+ +F K+I T+G++ P ++ Sbjct: 12 TFKLVLVGDGGTGKTTFVKRHLTGEFEKKYIATIGVEVH----------PLSFYTNFGEI 61 Query: 69 HLQLWDTAGQERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVRNWMSQLQANAYCENPDI 128 +WDTAG E+F L ++ +A ++MFD+TS+ ++ NV NW L CEN I Sbjct: 62 KFDVWDTAGLEKFGGLRDGYYINAQCAIIMFDVTSRITYKNVPNWHRDLVRV--CENIPI 119 Query: 129 VLIGNKADLPDQREVNERQARELADKYGIPYFETSAATGQNVEKAVETLLDLI 181 VL GNK D+ +R+V + K + Y++ SA + N EK L + Sbjct: 120 VLCGNKVDVK-ERKVKAKTI-TFHRKKNLQYYDISAKSNYNFEKPFLWLARKL 170 >5XOJ-A nrPDB Length = 182 Score = 172 bits (437), Expect = 9e-44, Method: Composition-based stats. Identities = 56/173 (32%), Positives = 87/173 (50%), Gaps = 14/173 (8%) Query: 9 LIKLLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYNAQGPNGSSGKAFKV 68 KL+ +GD G GKTTF+ R+ +F K+I T+G++ P ++ Sbjct: 12 TFKLVLVGDGGTGKTTFVKRHLTGEFEKKYIATIGVEVH----------PLSFYTNFGEI 61 Query: 69 HLQLWDTAGQERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVRNWMSQLQANAYCENPDI 128 +WDTAG E+F L ++ +A ++MFD+TS+ ++ NV NW L CEN I Sbjct: 62 KFDVWDTAGLEKFGGLRDGYYINAQCAIIMFDVTSRITYKNVPNWHRDLVRV--CENIPI 119 Query: 129 VLIGNKADLPDQREVNERQARELADKYGIPYFETSAATGQNVEKAVETLLDLI 181 VL GNK D+ +R+V + K + Y++ SA + N EK L + Sbjct: 120 VLCGNKVDVK-ERKVKAKTI-TFHRKKNLQYYDISAKSNYNFEKPFLWLARKL 170 >3A58-B nrPDB Length = 188 Score = 172 bits (436), Expect = 1e-43, Method: Composition-based stats. Identities = 50/184 (27%), Positives = 84/184 (45%), Gaps = 27/184 (14%) Query: 11 KLLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYNAQGPNGSSGKAFKVHL 70 KL+ +GD GKT L + +F ++ TV ++ V + + +V L Sbjct: 12 KLVIVGDGACGKTCLLIVNSKGQFPEVYVPTVFENY-VADVEVDGR----------RVEL 60 Query: 71 QLWDTAGQERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVRN-WMSQLQANAYCENPDIV 129 LWDTAGQE + L + D+ L+ F + S NV+ W++++ +C+ I+ Sbjct: 61 ALWDTAGQEDYDRLRPLSYPDSNVVLICFSIDLPDSLENVQEKWIAEVL--HFCQGVPII 118 Query: 130 LIGNKADLPD------------QREVNERQARELADKYGIP-YFETSAATGQNVEKAVET 176 L+G K DL + Q+ V ++ + +AD+ G Y+E SA TG V + E Sbjct: 119 LVGCKVDLRNDPQTIEQLRQEGQQPVTSQEGQSVADQIGATGYYECSAKTGYGVREVFEA 178 Query: 177 LLDL 180 Sbjct: 179 ATRA 182 >1RYH-A nrPDB Length = 203 Score = 172 bits (435), Expect = 1e-43, Method: Composition-based stats. Identities = 57/206 (27%), Positives = 88/206 (42%), Gaps = 46/206 (22%) Query: 10 IKLLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYNAQGPNGSSGKAFKVH 69 IK + +GD VGKT L YT N F ++I TV ++ V+ + + V+ Sbjct: 6 IKCVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSAN-VMVDGK----------PVN 54 Query: 70 LQLWDTAGQERFRSLTTAFFRD-------------------AMGFLLMFDLTSQQSFLNV 110 L LWDTAGQE + L + A FL+ F L S SF NV Sbjct: 55 LGLWDTAGQEDYDRLRPLSYPQTVGETYGKDITSRGKDKPIADVFLICFSLVSPASFENV 114 Query: 111 R-NWMSQLQANAYCENPDIVLIGNKADLPDQR------------EVNERQARELADKYG- 156 R W +++ +C N I+L+G K DL D + + Q +A + G Sbjct: 115 RAKWYPEVR--HHCPNTPIILVGTKLDLRDDKDTIEKLKEKKLTPITYPQGLAMAKEIGA 172 Query: 157 IPYFETSAATGQNVEKAVETLLDLIM 182 + Y E SA T + ++ + + ++ Sbjct: 173 VKYLECSALTQRGLKTVFDEAIRAVL 198 >5ZVP-A nrPDB Length = 181 Score = 171 bits (434), Expect = 2e-43, Method: Composition-based stats. Identities = 52/186 (27%), Positives = 79/186 (42%), Gaps = 27/186 (14%) Query: 11 KLLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYNAQGPNGSSGKAFKVHL 70 KL+ +GD GKT L + F ++ TV ++ V + + V L Sbjct: 7 KLVIVGDGACGKTCLLIVNSKGTFPEVYVPTVFENY-VADVEVDGK----------HVEL 55 Query: 71 QLWDTAGQERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVRN-WMSQLQANAYCENPDIV 129 LWDTAGQE + L + D+ L+ F + S S NV+ W+S++ +C+ I+ Sbjct: 56 ALWDTAGQEDYDRLRPLSYPDSHVILICFAIDSPDSLDNVQEKWISEVL--HFCQGLPII 113 Query: 130 LIGNKADLPD------------QREVNERQARELADKYG-IPYFETSAATGQNVEKAVET 176 L+G K DL Q+ V Q E+ K G Y E SA T + V + E Sbjct: 114 LVGCKKDLRHDPKTIEELHKTSQKPVTPEQGEEVRKKIGAYKYLECSARTNEGVREVFEA 173 Query: 177 LLDLIM 182 + Sbjct: 174 ATRAAL 179 >5VCU-A nrPDB Length = 208 Score = 170 bits (432), Expect = 3e-43, Method: Composition-based stats. Identities = 55/189 (29%), Positives = 82/189 (43%), Gaps = 27/189 (14%) Query: 10 IKLLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYNAQGPNGSSGKAFKVH 69 IK + +GD VGKT L Y+ F ++ TV ++ + + V Sbjct: 12 IKCVVVGDGAVGKTALLIAYSSGCFPEDYVPTVFDNYNKNIPYGDG-----------IVS 60 Query: 70 LQLWDTAGQERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVR-NWMSQLQANAYCENPDI 128 + L+DTAGQE + L + D FL+ F L + S N W +L+ Y + I Sbjct: 61 IALYDTAGQEDYDRLRPLSYPDTDVFLVCFSLENPNSLENCHSKWAEELK--HYNPDTPI 118 Query: 129 VLIGNKADLPDQRE------------VNERQARELADKYG-IPYFETSAATGQNVEKAVE 175 VL+G K DL E V Q +E+ DK Y E SA T +N+ +A Sbjct: 119 VLVGTKLDLKKDEEYVKKLKEKKISPVTTEQGQEMKDKIKACGYIECSAKTMENLTEAFN 178 Query: 176 TLLDLIMKR 184 +D+ MK+ Sbjct: 179 MAIDIAMKQ 187 >3CLV-A nrPDB Length = 208 Score = 170 bits (432), Expect = 4e-43, Method: Composition-based stats. Identities = 50/203 (24%), Positives = 92/203 (45%), Gaps = 31/203 (15%) Query: 10 IKLLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRV------------------ 51 K + LG+S VGK++ + R T + F+ TT+G F V Sbjct: 8 YKTVLLGESSVGKSSIVLRLTKDTFHENTNTTIGASFCTYVVNLNDINIKNNSNNEKNNN 67 Query: 52 ---------VYNAQGPNGSSGKAFKVHLQLWDTAGQERFRSLTTAFFRDAMGFLLMFDLT 102 V N + + +WDTAGQER+ S+ ++R A +++FD++ Sbjct: 68 INSINDDNNVIITNQHNNYNENLCNIKFDIWDTAGQERYASIVPLYYRGATCAIVVFDIS 127 Query: 103 SQQSFLNVRNWMSQLQANAYCENPDIVLIGNKADLPDQREVNERQARELADKYGIPYFET 162 + + + W++QL+ N I+L+ NK D ++ +V+ + ++ A + + +T Sbjct: 128 NSNTLDRAKTWVNQLKI---SSNYIIILVANKID-KNKFQVDILEVQKYAQDNNLLFIQT 183 Query: 163 SAATGQNVEKAVETLLDLIMKRM 185 SA TG N++ L + I K + Sbjct: 184 SAKTGTNIKNIFYMLAEEIYKNI 206 >3PIR-A nrPDB Length = 183 Score = 167 bits (424), Expect = 3e-42, Method: Composition-based stats. Identities = 46/164 (28%), Positives = 79/164 (48%), Gaps = 12/164 (7%) Query: 22 KTTFLYRYTDNKFNPKFITTVGIDFREKRVVYNAQGPNGSSGKAFKVHLQLWDTAGQERF 81 K+ ++ F P++ T+ + + + N L + DTAGQE F Sbjct: 31 KSALTIQFFQKIFVPEYDPTIEDSYLKHTEIDNQWAI-----------LDVLDTAGQEEF 79 Query: 82 RSLTTAFFRDAMGFLLMFDLTSQQSFLNVRNWMSQLQANAYCENPDIVLIGNKADLPDQR 141 ++ + R GFL+++ +T + SF +V + + E+ ++L+ NK DL R Sbjct: 80 SAMREQYMRTGDGFLIVYSVTDKASFEHVDRFHQLILRVKDRESFPMILVANKVDLMHLR 139 Query: 142 EVNERQARELADKYGIPYFETSAAT-GQNVEKAVETLLDLIMKR 184 +V Q +E+A KY IPY ETSA NV+K L+ +I ++ Sbjct: 140 KVTRDQGKEMATKYNIPYIETSAKDPPLNVDKTFHDLVRVIRQQ 183 >3E5H-A nrPDB Length = 178 Score = 167 bits (423), Expect = 3e-42, Method: Composition-based stats. Identities = 47/181 (25%), Positives = 80/181 (44%), Gaps = 11/181 (6%) Query: 4 GDYDYLIKLLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYNAQGPNGSSG 63 G + +K++ LGD GKT+ + F ++ T+G+DF +R+ Sbjct: 1 GSHMRQLKIVVLGDGASGKTSLTTCFAQETFGKQYKQTIGLDFFLRRITLPGN------- 53 Query: 64 KAFKVHLQLWDTAGQERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVRNWMSQLQA--NA 121 V LQ+WD GQ + + A G LL++D+T+ QSF N+ +W + ++ Sbjct: 54 --LNVTLQIWDIGGQTIGGKMLDKYIYGAQGVLLVYDITNYQSFENLEDWYTVVKKVSEE 111 Query: 122 YCENPDIVLIGNKADLPDQREVNERQARELADKYGIPYFETSAATGQNVEKAVETLLDLI 181 P + L+GNK DL R + + + G SA TG +V + + I Sbjct: 112 SETQPLVALVGNKIDLEHMRTIKPEKHLRFCQENGFSSHFVSAKTGDSVFLCFQKVAAEI 171 Query: 182 M 182 + Sbjct: 172 L 172 >3Q85-A nrPDB Length = 169 Score = 166 bits (422), Expect = 4e-42, Method: Composition-based stats. Identities = 45/179 (25%), Positives = 81/179 (45%), Gaps = 15/179 (8%) Query: 9 LIKLLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYNAQGPNGSSGKAFKV 68 + K++ +G+SGVGK+T + + + D E+R++ + + + + Sbjct: 2 VFKVMLVGESGVGKSTLAGTFGGLQGDHAHEMENSEDTYERRIMVDKE-------EVTLI 54 Query: 69 HLQLW---DTAGQERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVRNWMSQLQANAYCEN 125 +W D G L + FL++F +T ++SF V + +L+A + Sbjct: 55 VYDIWEQGDAGGW-----LQDHCLQTGDAFLIVFSVTDRRSFSKVPETLLRLRAGRPHHD 109 Query: 126 PDIVLIGNKADLPDQREVNERQARELADKYGIPYFETSAATGQNVEKAVETLLDLIMKR 184 ++L+GNK+DL REV+ + R LA + ETSAA N + E + I R Sbjct: 110 LPVILVGNKSDLARSREVSLEEGRHLAGTLSCKHIETSAALHHNTRELFEGAVRQIRLR 168 >3OES-A nrPDB Length = 201 Score = 166 bits (421), Expect = 6e-42, Method: Composition-based stats. Identities = 46/173 (26%), Positives = 85/173 (49%), Gaps = 11/173 (6%) Query: 11 KLLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYNAQGPNGSSGKAFKVHL 70 K++ LG VGKT+ +++ + +F+ + TV + + + + HL Sbjct: 26 KVVILGYRCVGKTSLAHQFVEGEFSEGYDPTVENTYSKIVTLGKDEF-----------HL 74 Query: 71 QLWDTAGQERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVRNWMSQLQANAYCENPDIVL 130 L DTAGQ+ + L +F G++L++ +TS SF + + +L +VL Sbjct: 75 HLVDTAGQDEYSILPYSFIIGVHGYVLVYSVTSLHSFQVIESLYQKLHEGHGKTRVPVVL 134 Query: 131 IGNKADLPDQREVNERQARELADKYGIPYFETSAATGQNVEKAVETLLDLIMK 183 +GNKADL +REV + ++LA+ +G + E+SA Q + ++ I + Sbjct: 135 VGNKADLSPEREVQAVEGKKLAESWGATFMESSARENQLTQGIFTKVIQEIAR 187 >3VHL-B nrPDB Length = 195 Score = 165 bits (418), Expect = 1e-41, Method: Composition-based stats. Identities = 49/185 (26%), Positives = 80/185 (43%), Gaps = 27/185 (14%) Query: 8 YLIKLLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYNAQGPNGSSGKAFK 67 IK + +GD VGK L YT NKF +++ TV ++ V+ + Sbjct: 9 QTIKCVVVGDGAVGKNCLLISYTTNKFPSEYVPTVFDNYAV-TVMIGGE----------P 57 Query: 68 VHLQLWDTAGQERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVRN-WMSQLQANAYCENP 126 L L+DTAGQE + L + FL+ F + S SF NV+ W+ ++ +C Sbjct: 58 YTLGLFDTAGQEDYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEI--THHCPKT 115 Query: 127 DIVLIGNKADLPD------------QREVNERQARELADKYG-IPYFETSAATGQNVEKA 173 +L+G + DL D Q+ + A +LA + Y E SA T + ++ Sbjct: 116 PFLLVGTQIDLRDDPSTIEKLAKNKQKPITPETAEKLARDLKAVKYVECSALTQKGLKNV 175 Query: 174 VETLL 178 + + Sbjct: 176 FDEAI 180 >2Q3H-A nrPDB Length = 201 Score = 163 bits (414), Expect = 4e-41, Method: Composition-based stats. Identities = 52/183 (28%), Positives = 88/183 (48%), Gaps = 27/183 (14%) Query: 10 IKLLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYNAQGPNGSSGKAFKVH 69 +K + +GD VGKT+ + YT N + ++I T +F V + + V Sbjct: 21 VKCVLVGDGAVGKTSLVVSYTTNGYPTEYIPTAFDNFSA-VVSVDGR----------PVR 69 Query: 70 LQLWDTAGQERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVRN-WMSQLQANAYCENPDI 128 LQL DTAGQ+ F L + + FLL F + S SF NV W+ +++ + C I Sbjct: 70 LQLCDTAGQDEFDKLRPLCYTNTDIFLLCFSVVSPSSFQNVSEKWVPEIRCH--CPKAPI 127 Query: 129 VLIGNKADLPD------------QREVNERQARELADKYGIP-YFETSAATGQNVEKAVE 175 +L+G ++DL + ++ V E A+ LA++ Y E SA T +N+++ + Sbjct: 128 ILVGTQSDLREDVKVLIELDKCKEKPVPEEAAKLLAEEIKAASYIECSALTQKNLKEVFD 187 Query: 176 TLL 178 + Sbjct: 188 AAI 190 >2NZJ-A nrPDB Length = 175 Score = 163 bits (413), Expect = 6e-41, Method: Composition-based stats. Identities = 41/169 (24%), Positives = 73/169 (43%), Gaps = 13/169 (7%) Query: 9 LIKLLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYNAQGPNGSSGKAFKV 68 L +++ LGD GVGKT+ + K +G D E+ + + + Sbjct: 4 LYRVVLLGDPGVGKTSLASLFA-GKQERDLHEQLGEDVYERTLTVDGEDT---------- 52 Query: 69 HLQLWDTAGQERFRSLTTA--FFRDAMGFLLMFDLTSQQSFLNVRNWMSQLQANAYCENP 126 L + DT E+ + + +++++ + + SF + QL+ ++ Sbjct: 53 TLVVVDTWEAEKLDKSWSQESCLQGGSAYVIVYSIADRGSFESASELRIQLRRTHQADHV 112 Query: 127 DIVLIGNKADLPDQREVNERQARELADKYGIPYFETSAATGQNVEKAVE 175 I+L+GNKADL REV+ + R A + + ETSA NV + E Sbjct: 113 PIILVGNKADLARCREVSVEEGRACAVVFDCKFIETSATLQHNVAELFE 161 >3Q72-A nrPDB Length = 166 Score = 163 bits (413), Expect = 6e-41, Method: Composition-based stats. Identities = 43/176 (24%), Positives = 79/176 (44%), Gaps = 12/176 (6%) Query: 9 LIKLLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYNAQGPNGSSGKAFKV 68 + K+L LG GVGK+ + + P+ G + ++ +V + + + Sbjct: 2 VYKVLLLGAPGVGKSALARIFGGVEDGPEAEAA-GHTY-DRSIVVDGE----------EA 49 Query: 69 HLQLWDTAGQERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVRNWMSQLQANAYCENPDI 128 L ++D Q+ R L +++++ +T + SF QL+ ++ I Sbjct: 50 SLMVYDIWEQDGGRWLPGHCMAMGDAYVIVYSVTDKGSFEKASELRVQLRRARQTDDVPI 109 Query: 129 VLIGNKADLPDQREVNERQARELADKYGIPYFETSAATGQNVEKAVETLLDLIMKR 184 +L+GNK+DL REV+ + R A + + ETSAA NV+ E ++ I R Sbjct: 110 ILVGNKSDLVRSREVSVDEGRACAVVFDCKFIETSAALHHNVQALFEGVVRQIRLR 165 >5XC3-A nrPDB Length = 176 Score = 161 bits (409), Expect = 1e-40, Method: Composition-based stats. Identities = 47/175 (26%), Positives = 93/175 (53%), Gaps = 11/175 (6%) Query: 10 IKLLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYNAQGPNGSSGKAFKVH 69 K++ +G SGVGK++ ++++ N+ T+G F K+V+ + + Sbjct: 6 YKIILIGSSGVGKSSIVHQFLFNRKISNVSPTIGAAFASKQVI---------AKNGKTLK 56 Query: 70 LQLWDTAGQERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVRNWMSQLQANAYCENPDIV 129 L +WDTAGQERFRS+T ++ +++G L++FD+T ++SF +V W++ L+ N + I+ Sbjct: 57 LNIWDTAGQERFRSITKMYYTNSLGCLVVFDVTDRESFDDVYYWINDLRINCHTTYY-IL 115 Query: 130 LIGNKADL-PDQREVNERQARELADKYGIPYFETSAATGQNVEKAVETLLDLIMK 183 ++ NK D+ + V+E + ++ Y S+ V ++D + + Sbjct: 116 VVANKIDIDKNNWRVSENEIKKFCRDNDCDYVFASSFESDTVNNLFGKMIDKMSE 170 >4MIT-A nrPDB Length = 186 Score = 161 bits (409), Expect = 1e-40, Method: Composition-based stats. Identities = 49/187 (26%), Positives = 81/187 (43%), Gaps = 27/187 (14%) Query: 10 IKLLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYNAQGPNGSSGKAFKVH 69 IKL+ +GD VGKT L Y+ KF +I TV ++ + ++ Sbjct: 11 IKLVVVGDGAVGKTCLLISYSIRKFPEDYIPTVFDNYVV-----------SLTAGTRQIQ 59 Query: 70 LQLWDTAGQERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNV-RNWMSQLQANAYCENPDI 128 L LWDTAG E + L + A FL+ F +TS S+ NV W ++ + I Sbjct: 60 LALWDTAGLEEYDQLRPLSYSSASIFLICFSVTSSVSYDNVITKWHPEVI--HFAPKVPI 117 Query: 129 VLIGNKADLPDQR------------EVNERQARELADKYG-IPYFETSAATGQNVEKAVE 175 +L+G K D + +N + EL ++ + Y E SA T +N++ + Sbjct: 118 ILVGTKLDTRNDPAIVKRLTEQGMTVINTAKGEELKNRIKAVKYIECSAKTSENLKTVFD 177 Query: 176 TLLDLIM 182 + ++ Sbjct: 178 EAVKTVL 184 >3T5G-A nrPDB Length = 181 Score = 160 bits (404), Expect = 6e-40, Method: Composition-based stats. Identities = 43/168 (25%), Positives = 79/168 (47%), Gaps = 11/168 (6%) Query: 11 KLLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYNAQGPNGSSGKAFKVHL 70 K+ LG VGK++ ++ + +F + T+ F K + N Q + HL Sbjct: 8 KIAILGYRSVGKSSLTIQFVEGQFVDSYDPTIENTF-TKLITVNGQ----------EYHL 56 Query: 71 QLWDTAGQERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVRNWMSQLQANAYCENPDIVL 130 QL DTAGQ+ + + D G++L++ +TS +SF ++ +L I+L Sbjct: 57 QLVDTAGQDEYSIFPQTYSIDINGYILVYSVTSIKSFEVIKVIHGKLLDMVGKVQIPIML 116 Query: 131 IGNKADLPDQREVNERQARELADKYGIPYFETSAATGQNVEKAVETLL 178 +GNK DL +R ++ + + LA+ + + E+SA Q ++ Sbjct: 117 VGNKKDLHMERVISYEEGKALAESWNAAFLESSAKENQTAVDVFRRII 164 >3REG-A nrPDB Length = 194 Score = 159 bits (403), Expect = 8e-40, Method: Composition-based stats. Identities = 47/180 (26%), Positives = 79/180 (43%), Gaps = 17/180 (9%) Query: 10 IKLLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYNAQGPNGSSGKAFKVH 69 +K++ +GD VGKT L ++ + ++ TV +F N + Sbjct: 24 LKIVVVGDGAVGKTCLLLAFSKGEIPTAYVPTVFENFSHVMKYKNEEFI----------- 72 Query: 70 LQLWDTAGQERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVR-NWMSQLQANAYCENPDI 128 L LWDTAGQE + L + D+ LL F + ++ SF N+ W +++ Y + Sbjct: 73 LHLWDTAGQEEYDRLRPLSYADSDVVLLCFAVNNRTSFDNISTKWEPEIK--HYIDTAKT 130 Query: 129 VLIGNKADLPDQ--REVNERQARELADKYGI-PYFETSAATGQNVEKAVETLLDLIMKRM 185 VL+G K DL +V +++ +L K G Y E S+ + + E +D I Sbjct: 131 VLVGLKVDLRKDGSDDVTKQEGDDLCQKLGCVAYIEASSVAKIGLNEVFEKSVDCIFSNK 190 >3RAP-R nrPDB Length = 167 Score = 159 bits (402), Expect = 9e-40, Method: Composition-based stats. Identities = 44/160 (27%), Positives = 83/160 (51%), Gaps = 11/160 (6%) Query: 22 KTTFLYRYTDNKFNPKFITTVGIDFREKRVVYNAQGPNGSSGKAFKVHLQLWDTAGQERF 81 K+ ++ F K+ T+ DF K + ++ L++ DTAG E+F Sbjct: 16 KSALTVQFVTGTFIEKYDPTI-EDFYRKEIEVDSSPS----------VLEILDTAGTEQF 64 Query: 82 RSLTTAFFRDAMGFLLMFDLTSQQSFLNVRNWMSQLQANAYCENPDIVLIGNKADLPDQR 141 S+ + ++ GF+L++ L +QQSF +++ Q+ E ++L+GNK DL +R Sbjct: 65 ASMRDLYIKNGQGFILVYSLVNQQSFQDIKPMRDQIIRVKRYEKVPVILVGNKVDLESER 124 Query: 142 EVNERQARELADKYGIPYFETSAATGQNVEKAVETLLDLI 181 EV+ + R LA+++G P+ ETSA + V++ ++ + Sbjct: 125 EVSSSEGRALAEEWGCPFMETSAKSKTMVDELFAEIVRQM 164 >4DJT-A nrPDB Length = 218 Score = 156 bits (395), Expect = 6e-39, Method: Composition-based stats. Identities = 51/175 (29%), Positives = 83/175 (47%), Gaps = 10/175 (5%) Query: 6 YDYLIKLLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYNAQGPNGSSGKA 65 + K+ +GD GVGKTT++ R D +F + TVG + QG Sbjct: 8 RELTYKICLIGDGGVGKTTYINRVLDGRFEKNYNATVGA-VNHPVTFLDDQGNV------ 60 Query: 66 FKVHLQLWDTAGQERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVRNWMSQLQANAYCEN 125 + +WDTAGQE+ L ++ A G +L FD+TS+ + N+ W+ + QA E Sbjct: 61 --IKFNVWDTAGQEKKAVLKDVYYIGASGAILFFDVTSRITCQNLARWVKEFQAVVGNE- 117 Query: 126 PDIVLIGNKADLPDQREVNERQARELADKYGIPYFETSAATGQNVEKAVETLLDL 180 IV+ NK D+ ++++++++ E+ YFE SA T N L + Sbjct: 118 APIVVCANKIDIKNRQKISKKLVMEVLKGKNYEYFEISAKTAHNFGLPFLHLARI 172 >1GWN-A nrPDB Length = 205 Score = 149 bits (377), Expect = 9e-37, Method: Composition-based stats. Identities = 42/182 (23%), Positives = 78/182 (42%), Gaps = 28/182 (15%) Query: 11 KLLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYNAQGPNGSSGKAFKVHL 70 K++ +GDS GKT L+ + + F ++ TV ++ ++ L Sbjct: 30 KIVVVGDSQCGKTALLHVFAKDCFPENYVPTVFENY-----------TASFEIDTQRIEL 78 Query: 71 QLWDTAGQERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNV-RNWMSQLQANAYCENPDIV 129 LWDT+G + ++ + D+ L+ FD++ ++ +V + W ++Q +C N ++ Sbjct: 79 SLWDTSGSPYYDNVRPLSYPDSDAVLICFDISRPETLDSVLKKWKGEIQ--EFCPNTKML 136 Query: 130 LIGNKADLP------------DQREVNERQARELADKYGIP-YFETSAATGQN-VEKAVE 175 L+G K+DL Q V+ Q +A + G Y E SA +N V Sbjct: 137 LVGCKSDLRTDVSTLVELSNHRQTPVSYDQGANMAKQIGAATYIECSALQSENSVRDIFH 196 Query: 176 TL 177 Sbjct: 197 VA 198 >2GF0-A nrPDB Length = 199 Score = 148 bits (375), Expect = 1e-36, Method: Composition-based stats. Identities = 43/164 (26%), Positives = 75/164 (45%), Gaps = 13/164 (7%) Query: 22 KTTFLYRYTDNKFNPKFITTVGIDFREKRVVYNAQGPNGSSGKAFKVHLQLWDTAGQERF 81 K++ + R+ F +I T+ +R S LQ+ DT G +F Sbjct: 21 KSSLVLRFVKGTFRDTYIPTIEDTYR-----------QVISCDKSVCTLQITDTTGSHQF 69 Query: 82 RSLTTAFFRDAMGFLLMFDLTSQQSFLNVRNWMSQLQANAYC-ENPDIVLIGNKADLPDQ 140 ++ F+L+F +TS+QS + + E+ ++L+GNK D Q Sbjct: 70 PAMQRLSISKGHAFILVFSVTSKQSLEELGPIYKLIVQIKGSVEDIPVMLVGNKCD-ETQ 128 Query: 141 REVNERQARELADKYGIPYFETSAATGQNVEKAVETLLDLIMKR 184 REV+ R+A+ +A ++ + ETSA NV++ + LL L +R Sbjct: 129 REVDTREAQAVAQEWKCAFMETSAKMNYNVKELFQELLTLETRR 172 >1M7B-A nrPDB Length = 184 Score = 148 bits (373), Expect = 2e-36, Method: Composition-based stats. Identities = 42/182 (23%), Positives = 78/182 (42%), Gaps = 28/182 (15%) Query: 11 KLLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYNAQGPNGSSGKAFKVHL 70 K++ +GDS GKT L+ + + F ++ TV ++ ++ L Sbjct: 9 KIVVVGDSQCGKTALLHVFAKDCFPENYVPTVFENY-----------TASFEIDTQRIEL 57 Query: 71 QLWDTAGQERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNV-RNWMSQLQANAYCENPDIV 129 LWDT+G + ++ + D+ L+ FD++ ++ +V + W ++Q +C N ++ Sbjct: 58 SLWDTSGSPYYDNVRPLSYPDSDAVLICFDISRPETLDSVLKKWKGEIQ--EFCPNTKML 115 Query: 130 LIGNKADLP------------DQREVNERQARELADKYGIP-YFETSAATGQN-VEKAVE 175 L+G K+DL Q V+ Q +A + G Y E SA +N V Sbjct: 116 LVGCKSDLRTDVSTLVELSNHRQTPVSYDQGANMAKQIGAATYIECSALQSENSVRDIFH 175 Query: 176 TL 177 Sbjct: 176 VA 177 >6FAE-B nrPDB Length = 213 Score = 145 bits (365), Expect = 2e-35, Method: Composition-based stats. Identities = 37/187 (19%), Positives = 76/187 (40%), Gaps = 18/187 (9%) Query: 2 TDGDYDYLIKLLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYNAQGPNGS 61 T+ Y +++L +G GKTT LY+ + I T+G F + V Y Sbjct: 42 TENLYFQSMRILMVGLDAAGKTTILYKLKLGEIVTT-IPTIG--FNVETVEYK------- 91 Query: 62 SGKAFKVHLQLWDTAGQERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVRNWMSQLQANA 121 + +WD GQ++ R L +F++ G + + D ++ R + ++ A Sbjct: 92 -----NISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERVNEAREELMRMLAED 146 Query: 122 YCENPDIVLIGNKADLPDQR---EVNERQARELADKYGIPYFETSAATGQNVEKAVETLL 178 + +++ NK DLP+ E+ ++ T A +G + + ++ L Sbjct: 147 ELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRHRNWYIQATCATSGDGLYEGLDWLS 206 Query: 179 DLIMKRM 185 + + + Sbjct: 207 NQLRNQK 213 >2AL7-A nrPDB Length = 186 Score = 144 bits (364), Expect = 3e-35, Method: Composition-based stats. Identities = 41/178 (23%), Positives = 74/178 (41%), Gaps = 17/178 (9%) Query: 10 IKLLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYNAQGPNGSSGKAFKVH 69 ++L +G GKTTF+ +F+ I TVG + R+ V Sbjct: 23 MELTLVGLQYSGKTTFVNVIASGQFSEDMIPTVGFNMRKVT--------------KGNVT 68 Query: 70 LQLWDTAGQERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVRNWMSQLQANAYCENPDIV 129 +++WD GQ RFRS+ + R + M D ++ RN + L + ++ Sbjct: 69 IKIWDIGGQPRFRSMWERYCRGVNAIVYMIDAADREKIEASRNELHNLLDKPQLQGIPVL 128 Query: 130 LIGNKADLP---DQREVNERQARELADKYGIPYFETSAATGQNVEKAVETLLDLIMKR 184 ++GNK DLP D++++ E+ I + S N++ ++ L+ R Sbjct: 129 VLGNKRDLPNALDEKQLIEKMNLSAIQDREICCYSISCKEKDNIDITLQWLIQHSKSR 186 >4ILE-A nrPDB Length = 184 Score = 143 bits (361), Expect = 6e-35, Method: Composition-based stats. Identities = 43/172 (25%), Positives = 73/172 (42%), Gaps = 17/172 (9%) Query: 10 IKLLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYNAQGPNGSSGKAFKVH 69 ++L +G GKTTF+ +FN I TVG + R+ V Sbjct: 23 MELTLVGLQYSGKTTFVNVIASGQFNEDMIPTVGFNMRKIT--------------KGNVT 68 Query: 70 LQLWDTAGQERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVRNWMSQLQANAYCENPDIV 129 ++LWD GQ RFRS+ + R + M D Q+ +N + L + ++ Sbjct: 69 IKLWDIGGQPRFRSMWERYCRGVSAIVYMVDAADQEKIEASKNELHNLLDKPQLQGIPVL 128 Query: 130 LIGNKADLP---DQREVNERQARELADKYGIPYFETSAATGQNVEKAVETLL 178 ++GNK DLP D++E+ E+ I + S N++ ++ L+ Sbjct: 129 VLGNKRDLPGALDEKELIEKMNLSAIQDREICCYSISCKEKDNIDITLQWLI 180 >1Z6X-A nrPDB Length = 180 Score = 141 bits (356), Expect = 2e-34, Method: Composition-based stats. Identities = 41/184 (22%), Positives = 77/184 (41%), Gaps = 28/184 (15%) Query: 9 LIKLLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYNAQGPNGSSGKAFKV 68 +++L +G GKTT LY+ + I T+G F + V Y + Sbjct: 17 QMRILMVGLDAAGKTTILYKLKLGEIVTT-IPTIG--FNVETVEYK------------NI 61 Query: 69 HLQLWDTAGQERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVRNWMSQLQANAYCENPDI 128 +WD GQ+R R L +F++ G + + D ++ V + + ++ + + Sbjct: 62 CFTVWDVGGQDRIRPLWKHYFQNTQGLIFVVDSNDRERIQEVADELQKMLLVDELRDAVL 121 Query: 129 VLIGNKADLPDQREVNERQARELADKYGIPYFE--------TSAATGQNVEKAVETLLDL 180 +L NK DLP+ ++ E+ DK G+ T A G + + ++ L + Sbjct: 122 LLFANKQDLPNAMAIS-----EMTDKLGLQSLRNRTWYVQATCATQGTGLYEGLDWLSNE 176 Query: 181 IMKR 184 + KR Sbjct: 177 LSKR 180 >3LVQ-E nrPDB Length = 497 Score = 141 bits (355), Expect = 3e-34, Method: Composition-based stats. Identities = 41/192 (21%), Positives = 73/192 (38%), Gaps = 20/192 (10%) Query: 3 DGDYDYLIKLLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYNAQGPNGSS 62 +G + +++L LG GKTT LY+ K T + F + V Y Sbjct: 316 EGLSNKEMRILMLGLDAAGKTTILYKL---KLGQSVTTIPTVGFNVETVTYK-------- 364 Query: 63 GKAFKVHLQLWDTAGQERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVRNWMSQLQANAY 122 V +WD GQ++ R L ++ G + + D + R + ++ + Sbjct: 365 ----NVKFNVWDVGGQDKIRPLWRHYYTGTQGLIFVVDCADRDRIDEARQELHRIINDRE 420 Query: 123 CENPDIVLIGNKADLPDQR---EVNERQARELADKYGIPYFETSAAT-GQNVEKAVETLL 178 + I++ NK DLPD E+ E+ Y + S AT G + + + L Sbjct: 421 MRDAIILIFANKQDLPDAMKPHEIQEKLGLTRIRDRNW-YVQPSCATSGDGLYEGLTWLT 479 Query: 179 DLIMKRMEQCVE 190 ++ +E Sbjct: 480 SNYKSKLAAALE 491 >2B6H-A nrPDB Length = 192 Score = 140 bits (353), Expect = 5e-34, Method: Composition-based stats. Identities = 39/184 (21%), Positives = 75/184 (40%), Gaps = 28/184 (15%) Query: 9 LIKLLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYNAQGPNGSSGKAFKV 68 +++L +G GKTT LY+ + I T+G F + V Y + Sbjct: 29 QMRILMVGLDAAGKTTILYKLKLGEIVTT-IPTIG--FNVETVEYK------------NI 73 Query: 69 HLQLWDTAGQERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVRNWMSQLQANAYCENPDI 128 +WD GQ++ R L +F++ G + + D ++ + + ++ + + Sbjct: 74 CFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERVQESADELQKMLQEDELRDAVL 133 Query: 129 VLIGNKADLPDQREVNERQARELADKYGIPYFE--------TSAATGQNVEKAVETLLDL 180 ++ NK D+P+ V+ EL DK G+ + T A G + ++ L Sbjct: 134 LVFANKQDMPNAMPVS-----ELTDKLGLQHLRSRTWYVQATCATQGTGLYDGLDWLSHE 188 Query: 181 IMKR 184 + KR Sbjct: 189 LSKR 192 >4YLG-A nrPDB Length = 173 Score = 140 bits (352), Expect = 7e-34, Method: Composition-based stats. Identities = 38/178 (21%), Positives = 74/178 (41%), Gaps = 28/178 (15%) Query: 10 IKLLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYNAQGPNGSSGKAFKVH 69 +++L +G GKT+ LY+ + I T+G F + V Y + Sbjct: 14 MRILMVGLDAAGKTSILYKLKLGEIVTT-IPTIG--FNVETVEYK------------NIS 58 Query: 70 LQLWDTAGQERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVRNWMSQLQANAYCENPDIV 129 +WD GQ++ R L ++++ + + D + R + ++ N ++ Sbjct: 59 FTVWDVGGQDKIRPLWRHYYQNTQAIIFVVDSNDRDRIGEAREELMKMLNEDEMRNAILL 118 Query: 130 LIGNKADLPDQREVNERQARELADKYGIP-------YFETSAAT-GQNVEKAVETLLD 179 + NK DLP ++ E+ +K G+ Y +TS AT G + + ++ L D Sbjct: 119 VFANKHDLPQAMSIS-----EVTEKLGLQTIKNRKWYCQTSCATNGDGLYEGLDWLAD 171 >3O47-A nrPDB Length = 329 Score = 139 bits (350), Expect = 1e-33, Method: Composition-based stats. Identities = 35/179 (19%), Positives = 73/179 (40%), Gaps = 18/179 (10%) Query: 10 IKLLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYNAQGPNGSSGKAFKVH 69 +++L +G GKTT LY+ + I T+G F + V Y + Sbjct: 166 MRILMVGLDAAGKTTILYKLKLGEIVTT-IPTIG--FNVETVEYK------------NIS 210 Query: 70 LQLWDTAGQERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVRNWMSQLQANAYCENPDIV 129 +WD GQ++ R L +F++ G + + D ++ R + ++ A + ++ Sbjct: 211 FTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERVNEAREELMRMLAEDELRDAVLL 270 Query: 130 LIGNKADLPDQR---EVNERQARELADKYGIPYFETSAATGQNVEKAVETLLDLIMKRM 185 + NK DLP+ E+ ++ T A +G + + ++ L + + + Sbjct: 271 VFANKQDLPNAMNAAEITDKLGLHSLRHRNWYIQATCATSGDGLYEGLDWLSNQLRNQK 329 >5NZV-F nrPDB Length = 181 Score = 139 bits (350), Expect = 1e-33, Method: Composition-based stats. Identities = 43/181 (23%), Positives = 75/181 (41%), Gaps = 28/181 (15%) Query: 10 IKLLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYNAQGPNGSSGKAFKVH 69 +++L +G G GKTT LY+ + I T+G F + V Y + Sbjct: 18 MRILMVGLDGAGKTTVLYKLKLGEVITT-IPTIG--FNVETVQYK------------NIS 62 Query: 70 LQLWDTAGQERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVRNWMSQLQANAYCENPDIV 129 +WD GQ+R RSL ++R+ G + + D + R M ++ N + Sbjct: 63 FTVWDVGGQDRIRSLWRHYYRNTEGVIFVVDSNDRSRIGEAREVMQRMLNEDELRNAAWL 122 Query: 130 LIGNKADLPDQREVNERQARELADKYGIPYFE--------TSAATGQNVEKAVETLLDLI 181 + NK DLP+ A E+ +K G+ T A +G+ + + +E L + + Sbjct: 123 VFANKQDLPEAMS-----AAEITEKLGLHSIRNRPWFIQATCATSGEGLYEGLEWLSNSL 177 Query: 182 M 182 Sbjct: 178 K 178 >3AQ4-A nrPDB Length = 184 Score = 137 bits (345), Expect = 4e-33, Method: Composition-based stats. Identities = 35/178 (19%), Positives = 75/178 (42%), Gaps = 18/178 (10%) Query: 10 IKLLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYNAQGPNGSSGKAFKVH 69 +++L +G GKTT LY+ + I T+G F + V Y + Sbjct: 21 MRILMVGLDAAGKTTILYKLKLGEIVTT-IPTIG--FNVETVEYK------------NIS 65 Query: 70 LQLWDTAGQERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVRNWMSQLQANAYCENPDIV 129 +WD GQ++ R L +F++ G + + D + + R+ + ++ + ++ Sbjct: 66 FTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLL 125 Query: 130 LIGNKADLPDQR---EVNERQARELADKYGIPYFETSAATGQNVEKAVETLLDLIMKR 184 + NK DLP+ E+ ++ + T A +G+ + + ++ L + I + Sbjct: 126 VFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNIASK 183 >2A5F-A nrPDB Length = 175 Score = 136 bits (344), Expect = 5e-33, Method: Composition-based stats. Identities = 36/171 (21%), Positives = 64/171 (37%), Gaps = 18/171 (10%) Query: 10 IKLLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYNAQGPNGSSGKAFKVH 69 +++L LG GKTT LY+ K T + F + V Y V Sbjct: 14 MRILMLGLDAAGKTTILYKL---KLGQSVTTIPTVGFNVETVTYK------------NVK 58 Query: 70 LQLWDTAGQERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVRNWMSQLQANAYCENPDIV 129 +WD GQ++ R L ++ G + + D + R + ++ + + I+ Sbjct: 59 FNVWDVGGQDKIRPLWRHYYTGTQGLIFVVDCADRDRIDEARQELHRIINDREMRDAIIL 118 Query: 130 LIGNKADLPDQR---EVNERQARELADKYGIPYFETSAATGQNVEKAVETL 177 + NK DLPD E+ E+ + A +G + + + L Sbjct: 119 IFANKQDLPDAMKPHEIQEKLGLTRIRDRNWYVQPSCATSGDGLYEGLTWL 169 >5UF8-A nrPDB Length = 181 Score = 136 bits (344), Expect = 5e-33, Method: Composition-based stats. Identities = 40/176 (22%), Positives = 71/176 (40%), Gaps = 28/176 (15%) Query: 10 IKLLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYNAQGPNGSSGKAFKVH 69 +++L +G GKTT LY+ + I T+G F + V Y + Sbjct: 18 MRILMVGLDAAGKTTILYKLKLGEIVTT-IPTIG--FNVETVEYK------------NIS 62 Query: 70 LQLWDTAGQERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVRNWMSQLQANAYCENPDIV 129 +WD GQ++ R L +F++ G + + D + R + Q+ + ++ Sbjct: 63 FTVWDVGGQDKIRPLWRYYFQNTQGIIFVVDSNDRDRIAEAREELQQMLNEDELRDALLL 122 Query: 130 LIGNKADLPDQREVNERQARELADKYGIPYFE--------TSAATGQNVEKAVETL 177 + NK DLP+ A E+ +K G+ T A TG + + +E L Sbjct: 123 VFANKQDLPNAMN-----AAEITEKLGLHSIRQRPWYIQATCATTGDGLYEGLEWL 173 >6DFF-C nrPDB Length = 193 Score = 136 bits (342), Expect = 8e-33, Method: Composition-based stats. Identities = 34/179 (18%), Positives = 72/179 (40%), Gaps = 18/179 (10%) Query: 10 IKLLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYNAQGPNGSSGKAFKVH 69 +++L +G GKTT LY+ + I T+G F + V Y + Sbjct: 30 MRILMVGLDAAGKTTILYKLKLGEIVTT-IPTIG--FNVETVEYK------------NIS 74 Query: 70 LQLWDTAGQERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVRNWMSQLQANAYCENPDIV 129 +WD G ++ R L +F++ G + + D ++ R + ++ A + ++ Sbjct: 75 FTVWDVGGLDKIRPLWRHYFQNTQGLIFVVDSNDRERVNEAREELMRMLAEDELRDAVLL 134 Query: 130 LIGNKADLPDQR---EVNERQARELADKYGIPYFETSAATGQNVEKAVETLLDLIMKRM 185 + NK DLP+ E+ ++ T A +G + + ++ L + + + Sbjct: 135 VFANKQDLPNAMNAAEITDKLGLHSLRHRNWYIQATCATSGDGLYEGLDWLSNQLRNQK 193 >3LRP-A nrPDB Length = 181 Score = 135 bits (341), Expect = 1e-32, Method: Composition-based stats. Identities = 35/171 (20%), Positives = 67/171 (39%), Gaps = 18/171 (10%) Query: 10 IKLLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYNAQGPNGSSGKAFKVH 69 +++L +G GKTT LY+ K T I F + V + + Sbjct: 18 VRILMVGLDAAGKTTILYKV---KLGEVVTTIPTIGFNVETVEF------------RNIS 62 Query: 70 LQLWDTAGQERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVRNWMSQLQANAYCENPDIV 129 +WD GQ++ R L ++ + G + + D ++ + R + ++ ++ I+ Sbjct: 63 FTVWDVGGQDKIRPLWRHYYSNTDGLIFVVDSNDRERIDDAREELHRMINEEELKDAIIL 122 Query: 130 LIGNKADLPDQR---EVNERQARELADKYGIPYFETSAATGQNVEKAVETL 177 + NK DLP+ EV E+ + T A G + + + L Sbjct: 123 VFANKQDLPNAMSAAEVTEKLHLNTIRERNWFIQSTCATRGDGLYEGFDWL 173 >1J2J-A nrPDB Length = 166 Score = 135 bits (341), Expect = 1e-32, Method: Composition-based stats. Identities = 34/179 (18%), Positives = 72/179 (40%), Gaps = 18/179 (10%) Query: 10 IKLLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYNAQGPNGSSGKAFKVH 69 +++L +G GKTT LY+ + I T+G F + V Y + Sbjct: 3 MRILMVGLDAAGKTTILYKLKLGEIVTT-IPTIG--FNVETVEYK------------NIS 47 Query: 70 LQLWDTAGQERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVRNWMSQLQANAYCENPDIV 129 +WD G ++ R L +F++ G + + D ++ R + ++ A + ++ Sbjct: 48 FTVWDVGGLDKIRPLWRHYFQNTQGLIFVVDSNDRERVNEAREELMRMLAEDELRDAVLL 107 Query: 130 LIGNKADLPDQR---EVNERQARELADKYGIPYFETSAATGQNVEKAVETLLDLIMKRM 185 + NK DLP+ E+ ++ T A +G + + ++ L + + + Sbjct: 108 VFANKQDLPNAMNAAEITDKLGLHSLRHRNWYIQATCATSGDGLYEGLDWLSNQLRNQK 166 >6BBQ-A nrPDB Length = 520 Score = 135 bits (340), Expect = 2e-32, Method: Composition-based stats. Identities = 35/171 (20%), Positives = 63/171 (36%), Gaps = 18/171 (10%) Query: 10 IKLLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYNAQGPNGSSGKAFKVH 69 +++L LG GKTT LY+ K T + F + V Y V Sbjct: 360 MRILMLGLDAAGKTTILYKL---KLGQSVTTIPTVGFNVETVTYK------------NVK 404 Query: 70 LQLWDTAGQERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVRNWMSQLQANAYCENPDIV 129 +WD G ++ R L ++ G + + D + R + ++ + + I+ Sbjct: 405 FNVWDVGGLDKIRPLWRHYYTGTQGLIFVVDCADRDRIDEARQELHRIINDREMRDAIIL 464 Query: 130 LIGNKADLPDQR---EVNERQARELADKYGIPYFETSAATGQNVEKAVETL 177 + NK DLPD E+ E+ + A +G + + + L Sbjct: 465 IFANKQDLPDAMKPHEIQEKLGLTRIRDRNWYVQPSCATSGDGLYEGLTWL 515 >5EE5-B nrPDB Length = 171 Score = 133 bits (335), Expect = 7e-32, Method: Composition-based stats. Identities = 40/184 (21%), Positives = 73/184 (39%), Gaps = 28/184 (15%) Query: 10 IKLLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYNAQGPNGSSGKAFKVH 69 +++L LG G GKTT LYR + I T+G F + V Y + Sbjct: 8 MRILILGLDGAGKTTILYRLQVGEVVTT-IPTIG--FNVETVTYK------------NLK 52 Query: 70 LQLWDTAGQERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVRNWMSQLQANAYCENPDIV 129 Q+WD G R ++ + + + D + ++ + + +V Sbjct: 53 FQVWDLGGLTSIRPYWRCYYSNTDAVIYVVDSCDRDRIGISKSELVAMLEEEELRKAILV 112 Query: 130 LIGNKADLPDQREVNERQARELADKYGIP--------YFETSAATGQNVEKAVETLLDLI 181 + NK D+ + E+A+ G+P F+TSA G +++A+E L++ + Sbjct: 113 VFANKQDMEQAMTSS-----EMANSLGLPALKDRKWQIFKTSATKGTGLDEAMEWLVETL 167 Query: 182 MKRM 185 R Sbjct: 168 KSRQ 171 >6HLU-A nrPDB Length = 974 Score = 131 bits (330), Expect = 2e-31, Method: Composition-based stats. Identities = 34/173 (19%), Positives = 65/173 (37%), Gaps = 7/173 (4%) Query: 10 IKLLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYNAQGPNGSSGKAFKVH 69 IK+ +GD GKT+ L + F+PK T G++ K + + + Sbjct: 481 IKVHLIGDGMAGKTSLLKQLIGETFDPKESQTHGLNVVTK--QAPNIKGLENDDELKECL 538 Query: 70 LQLWDTAGQERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVRNWMSQLQANAYCENPDIV 129 WD GQE + F + ++L+ D + N W+ + Y ++ Sbjct: 539 FHFWDFGGQEIMHASHQFFMTRSSVYMLLLDSRTDS---NKHYWLRHI--EKYGGKSPVI 593 Query: 130 LIGNKADLPDQREVNERQARELADKYGIPYFETSAATGQNVEKAVETLLDLIM 182 ++ NK D + +++ E + S G VE ++L ++ Sbjct: 594 VVMNKIDENPSYNIEQKKINERFPAIENRFHRISCKNGDGVESIAKSLKSAVL 646 >3DPU-A nrPDB Length = 535 Score = 130 bits (327), Expect = 5e-31, Method: Composition-based stats. Identities = 34/173 (19%), Positives = 65/173 (37%), Gaps = 7/173 (4%) Query: 10 IKLLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYNAQGPNGSSGKAFKVH 69 IK+ +GD GKT+ L + F+PK T G++ K + + + Sbjct: 42 IKVHLIGDGMAGKTSLLKQLIGETFDPKESQTHGLNVVTK--QAPNIKGLENDDELKECL 99 Query: 70 LQLWDTAGQERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVRNWMSQLQANAYCENPDIV 129 WD GQE + F + ++L+ D + N W+ + Y ++ Sbjct: 100 FHFWDFGGQEIMHASHQFFMTRSSVYMLLLDSRTDS---NKHYWLRHI--EKYGGKSPVI 154 Query: 130 LIGNKADLPDQREVNERQARELADKYGIPYFETSAATGQNVEKAVETLLDLIM 182 ++ NK D + +++ E + S G VE ++L ++ Sbjct: 155 VVMNKIDENPSYNIEQKKINERFPAIENRFHRISCKNGDGVESIAKSLKSAVL 207 >1MOZ-A nrPDB Length = 183 Score = 130 bits (326), Expect = 7e-31, Method: Composition-based stats. Identities = 36/177 (20%), Positives = 68/177 (38%), Gaps = 18/177 (10%) Query: 10 IKLLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYNAQGPNGSSGKAFKVH 69 +++L LG G GKTT LYR + T+G F + + Y + Sbjct: 19 LRILILGLDGAGKTTILYRLQIGEVVTT-KPTIG--FNVETLSYK------------NLK 63 Query: 70 LQLWDTAGQERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVRNWMSQLQANAYCENPDIV 129 L +WD GQ R ++ D + + D T + + + ++ ++ Sbjct: 64 LNVWDLGGQTSIRPYWRCYYADTAAVIFVVDSTDKDRMSTASKELHLMLQEEELQDAALL 123 Query: 130 LIGNKADLP---DQREVNERQARELADKYGIPYFETSAATGQNVEKAVETLLDLIMK 183 + NK D P EV++ +SA G+ + + ++ L+D+I + Sbjct: 124 VFANKQDQPGALSASEVSKELNLVELKDRSWSIVASSAIKGEGITEGLDWLIDVIKE 180 >5HZH-A nrPDB Length = 332 Score = 129 bits (324), Expect = 1e-30, Method: Composition-based stats. Identities = 40/154 (25%), Positives = 65/154 (42%), Gaps = 16/154 (10%) Query: 43 GIDFREKRVVYNAQGPNGSSGKAFKVHLQLWDTAGQERFRSLTTAFFRDAMGFLLMFDLT 102 G+ +K + V+L LWDTAG E + L + FL+ F L Sbjct: 178 GVMLIKKTAENIDEAAKELGSGGKPVNLGLWDTAGLEDYDRLRPLSYPQTDVFLICFSLV 237 Query: 103 SQQSFLNVR-NWMSQLQANAYCENPDIVLIGNKADLPDQR------------EVNERQAR 149 S SF NVR W +++ +C N I+L+G K DL D + + Q Sbjct: 238 SPASFENVRAKWYPEVR--HHCPNTPIILVGTKLDLRDDKDTIEKLKEKKLTPITYPQGL 295 Query: 150 ELADKYG-IPYFETSAATGQNVEKAVETLLDLIM 182 +A + G + Y E SA T + ++ + + ++ Sbjct: 296 AMAKEIGAVKYLECSALTQRGLKTVFDEAIRAVL 329 Score = 66.1 bits (160), Expect = 1e-11, Method: Composition-based stats. Identities = 19/58 (32%), Positives = 29/58 (50%), Gaps = 1/58 (1%) Query: 10 IKLLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYNAQGPNGSSGKAFK 67 IK + +GD VGKT L YT N F ++I TV ++ V+ + G + + K Sbjct: 7 IKCVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSAN-VMVDGSGLATTLERIEK 63 >2REX-B nrPDB Length = 197 Score = 128 bits (321), Expect = 3e-30, Method: Composition-based stats. Identities = 42/189 (22%), Positives = 79/189 (41%), Gaps = 28/189 (14%) Query: 11 KLLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYNAQGPNGSSGKAFKVHL 70 KL+ +GD GKT L + + ++ TV ++ + +V L Sbjct: 12 KLVLVGDVQCGKTAMLQVLAKDCYPETYVPTVFENY-----------TACLETEEQRVEL 60 Query: 71 QLWDTAGQERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNV-RNWMSQLQANAYCENPDIV 129 LWDT+G + ++ + D+ LL FD++ ++ + + W +++ YC + ++ Sbjct: 61 SLWDTSGSPYYDNVRPLCYSDSDAVLLCFDISRPETVDSALKKWRTEILD--YCPSTRVL 118 Query: 130 LIGNKADLP------------DQREVNERQARELADKYGIP-YFETSAATGQ-NVEKAVE 175 LIG K DL Q ++ Q +A + G Y E SA T + ++ Sbjct: 119 LIGCKTDLRTDLSTLMELSHQKQAPISYEQGCAIAKQLGAEIYLEGSAFTSEKSIHSIFR 178 Query: 176 TLLDLIMKR 184 T L + + Sbjct: 179 TASMLCLNK 187 >2H16-A nrPDB Length = 183 Score = 127 bits (319), Expect = 4e-30, Method: Composition-based stats. Identities = 34/176 (19%), Positives = 71/176 (40%), Gaps = 18/176 (10%) Query: 10 IKLLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYNAQGPNGSSGKAFKVH 69 K++ +G GKTT LY+++ N+ T+G + E + Sbjct: 23 HKVIIVGLDNAGKTTILYQFSMNEVVHT-SPTIGSNVEEIVI--------------NNTR 67 Query: 70 LQLWDTAGQERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVRNWMSQLQANAYCENPDIV 129 +WD GQE RS ++ + +++ D T ++ R + ++ A+ ++ Sbjct: 68 FLMWDIGGQESLRSSWNTYYTNTEFVIVVVDSTDRERISVTREELYKMLAHEDLRKAGLL 127 Query: 130 LIGNKADLPDQREVNE-RQARELADKYGIPYF--ETSAATGQNVEKAVETLLDLIM 182 + NK D+ + V E Q +L + A TG+ + + +E ++ + Sbjct: 128 IFANKQDVKECMTVAEISQFLKLTSIKDHQWHIQACCALTGEGLCQGLEWMMSRLK 183 >2YC4-C nrPDB Length = 208 Score = 126 bits (317), Expect = 6e-30, Method: Composition-based stats. Identities = 45/191 (23%), Positives = 84/191 (43%), Gaps = 14/191 (7%) Query: 11 KLLALGDSGVGKTTFLYRYTDN--KFNPKFITTVGIDFREKRVVYNAQGPNGSSGKAFKV 68 K+ +G++ VGK+ + +T KF + T G++ V V Sbjct: 22 KVAVVGEATVGKSALISMFTSKGSKFLKDYAMTSGVEVVVAPVTIPDT--------TVSV 73 Query: 69 HLQLWDTAGQERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVRNWMSQLQANAYCENPDI 128 L L DTAG + ++ + ++ +L+FD++S +SF + + W L++ + Sbjct: 74 ELFLLDTAGSDLYKEQISQYWNGVYYAILVFDVSSMESFESCKAWFELLKSARPDRERPL 133 Query: 129 --VLIGNKADLPDQR-EVNERQARELADKYGIPYFETSAA-TGQNVEKAVETLLDLIMKR 184 VL+ NK DLP QR +V A++ A + +F+ SA G++ + ++ + Sbjct: 134 RAVLVANKTDLPPQRHQVRLDMAQDWATTNTLDFFDVSANPPGKDADAPFLSIATTFYRN 193 Query: 185 MEQCVEKTQIP 195 E V Q Sbjct: 194 YEDKVAAFQDA 204 >1KSG-A nrPDB Length = 186 Score = 126 bits (317), Expect = 6e-30, Method: Composition-based stats. Identities = 42/184 (22%), Positives = 72/184 (39%), Gaps = 18/184 (9%) Query: 5 DYDYLIKLLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYNAQGPNGSSGK 64 + ++LL LG GKTT L ++ + + T+G F K + + Sbjct: 14 QKERELRLLMLGLDNAGKTTILKKF-NGEDVDTISPTLG--FNIKTLEHRG--------- 61 Query: 65 AFKVHLQLWDTAGQERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVRNWMSQLQANAYCE 124 L +WD GQ+ RS +F G + + D +Q + + + L Sbjct: 62 ---FKLNIWDVGGQKSLRSYWRNYFESTDGLIWVVDSADRQRMQDCQRELQSLLVEERLA 118 Query: 125 NPDIVLIGNKADLPDQREVNERQARELADKYGIPYFE---TSAATGQNVEKAVETLLDLI 181 +++ NK DLP N Q D ++ SA TG+++ ++ LLD I Sbjct: 119 GATLLIFANKQDLPGALSCNAIQEALELDSIRSHHWRIQGCSAVTGEDLLPGIDWLLDDI 178 Query: 182 MKRM 185 R+ Sbjct: 179 SSRV 182 >5C1S-A nrPDB Length = 391 Score = 126 bits (317), Expect = 7e-30, Method: Composition-based stats. Identities = 41/177 (23%), Positives = 76/177 (42%), Gaps = 17/177 (9%) Query: 7 DYLIKLLALGDSGVGKTTFLYRYT-DNKFNPKFITTVGIDFREKRVVYNAQGPNGSSGKA 65 D I++L +GD VGKTTF+ ++ + F+ + F +++ Y Sbjct: 220 DIKIRMLMVGDQNVGKTTFIRKFALQDPTGHDFMNAITTRFEMEKIKYE----------- 268 Query: 66 FKVHLQLWDTAGQERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVRNWMSQLQANAYCEN 125 + + D + A R L+++D+T+++SF N+ L N + + Sbjct: 269 ----IIMIDWGFYNKLLQTNPAISRTIEAILIVYDITNEESFQNIHRKYYPLINNKFSDV 324 Query: 126 PDIVLIGNKADLPDQREVNERQARELADKYGIPYFETSAATGQNVEKAVETLLDLIM 182 ++ +G K DL QR++ A LAD G Y E S+ ++ ++ L I Sbjct: 325 AGVI-VGYKTDLEAQRKITMGDALTLADWLGYKYVEMSSKDTEDHSSIIKALAHSIR 380 Score = 107 bits (268), Expect = 3e-24, Method: Composition-based stats. Identities = 45/180 (25%), Positives = 79/180 (43%), Gaps = 24/180 (13%) Query: 10 IKLLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYNAQGPNGSSGKAFKVH 69 I+LL +G SGVGKTT + F + G + REK V + + Sbjct: 63 IRLLVVGSSGVGKTTLC-----DCFFESHQSQ-GEETREKHVQIDNDF----------IR 106 Query: 70 LQLWDTAGQERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVRN-WMSQLQANAYCENPDI 128 + + D AGQ+ F + + L+M+D+T +SF +++ W+ + + I Sbjct: 107 ISISDIAGQQSFYA-CDNPYDGYDAILVMYDITELKSFTDLKTMWLPDIFLYCNI-DTQI 164 Query: 129 VLIGNKADLPDQREVNERQARELADKYGIPYFETSAATGQNVEKAVETLLDLIMKRMEQC 188 ++IGNK D R + ++A + A ++E S + + + L D I + QC Sbjct: 165 IIIGNKKDQEIDRIITRKEAEQFAQDRLCQFYEISTK-----DDSCQLLFDCISRDFLQC 219 >1YZG-A nrPDB Length = 179 Score = 123 bits (309), Expect = 5e-29, Method: Composition-based stats. Identities = 33/175 (18%), Positives = 67/175 (38%), Gaps = 18/175 (10%) Query: 10 IKLLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYNAQGPNGSSGKAFKVH 69 K++ +G GKTT LY++ N+ T+G + E V H Sbjct: 17 HKVIIVGLDNAGKTTILYQFLMNEVVHT-SPTIGSNVEEIVV--------------KNTH 61 Query: 70 LQLWDTAGQERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVRNWMSQLQANAYCENPDIV 129 +WD GQE RS ++ + +L+ D ++ + + ++ A+ ++ Sbjct: 62 FLMWDIGGQESLRSSWNTYYSNTEFIILVVDSIDRERLAITKEELYRMLAHEDLRKAAVL 121 Query: 130 LIGNKADLPDQR---EVNERQARELADKYGIPYFETSAATGQNVEKAVETLLDLI 181 + NK D+ E+++ + A TG+ + + +E + I Sbjct: 122 IFANKQDMKGCMTAAEISKYLTLSSIKDHPWHIQSCCALTGEGLCQGLEWMTSRI 176 >3C5C-A nrPDB Length = 187 Score = 123 bits (308), Expect = 7e-29, Method: Composition-based stats. Identities = 39/177 (22%), Positives = 80/177 (45%), Gaps = 15/177 (8%) Query: 10 IKLLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYNAQGPNGSSGKAFKVH 69 + L LG G GK+ ++ +F ++ + + + V + VH Sbjct: 22 VNLAILGRRGAGKSALTVKFLTKRFISEYDPNLEDTYSSEETVDH-----------QPVH 70 Query: 70 LQLWDTAGQERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVRNWMSQLQANAYC--ENPD 127 L++ DTA + R+ + A FL+++ + S+QSF + +++ L +A + Sbjct: 71 LRVMDTADLDTPRN-CERYLNWAHAFLVVYSVDSRQSFDSSSSYLELLALHAKETQRSIP 129 Query: 128 IVLIGNKADLPDQREVNERQARELADKYGIPYFETSA-ATGQNVEKAVETLLDLIMK 183 +L+GNK D+ R+V + + LA ++G +FE SA ++V+ + + Sbjct: 130 ALLLGNKLDMAQYRQVTKAEGVALAGRFGCLFFEVSACLDFEHVQHVFHEAVREARR 186 >2X77-A nrPDB Length = 189 Score = 115 bits (289), Expect = 1e-26, Method: Composition-based stats. Identities = 35/181 (19%), Positives = 69/181 (38%), Gaps = 18/181 (9%) Query: 7 DYLIKLLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYNAQGPNGSSGKAF 66 D I++L LG GKT+ LYR + G N + + Sbjct: 20 DRKIRVLMLGLDNAGKTSILYRLHLG---------------DVVTTVPTVGVNLETLQYK 64 Query: 67 KVHLQLWDTAGQERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVRNWMSQLQANAYCENP 126 + ++WD GQ R +F D + + D T + ++ + L Sbjct: 65 NISFEVWDLGGQTGVRPYWRCYFSDTDAVIYVVDSTDRDRMGVAKHELYALLDEDELRKS 124 Query: 127 DIVLIGNKADLPD---QREVNERQARELADKYGIPYFETSAATGQNVEKAVETLLDLIMK 183 +++ NK DLPD + E+ E+ ++S+ TG + + ++ L++ + + Sbjct: 125 LLLIFANKQDLPDAASEAEIAEQLGVSSIMNRTWTIVKSSSKTGDGLVEGMDWLVERLRE 184 Query: 184 R 184 + Sbjct: 185 Q 185 >4V0N-A nrPDB Length = 169 Score = 115 bits (288), Expect = 2e-26, Method: Composition-based stats. Identities = 39/183 (21%), Positives = 73/183 (39%), Gaps = 18/183 (9%) Query: 4 GDYDYLIKLLALGDSGVGKTTFLYRYTDN-KFNPKFITTVGIDFREKRVVYNAQGPNGSS 62 G + +L +G GKTT + R + + TVG E Sbjct: 1 GAASKKVNVLVVGLDNSGKTTIIERLKPRPRQAAEVAPTVGFTVDE-------------- 46 Query: 63 GKAFKVHLQLWDTAGQERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVRNWMSQLQANAY 122 + + ++D +G R+R+L ++R+A + + D + + R+ M + ++ Sbjct: 47 VEKGPLTFTVFDMSGAGRYRTLWEQYYREADAVVFVVDSADKLRMVVARDEMEHMLKHSN 106 Query: 123 CENPDIVLIGNKADLPDQR-EVNERQARELADKYGIPY--FETSAATGQNVEKAVETLLD 179 I+ NK DLP V QA L D P+ ++ TG+ V+K ++ L + Sbjct: 107 MRKVPILYFANKKDLPVAMPPVEIAQALGLDDIKDRPWQIVPSNGLTGEGVDKGIDWLAE 166 Query: 180 LIM 182 + Sbjct: 167 RLS 169 >5DE3-A nrPDB Length = 169 Score = 110 bits (276), Expect = 4e-25, Method: Composition-based stats. Identities = 34/182 (18%), Positives = 64/182 (35%), Gaps = 32/182 (17%) Query: 11 KLLALGDSGVGKTTFLYRYTDNKFNPKFITTVGID--FREKRVVYNAQGPNGSSGKAFKV 68 ++L LG GKTT L + + ITT+ F K + + Sbjct: 2 RILVLGLDNAGKTTILKAL-----SEEDITTITPTQGFNIKSLSRDG------------F 44 Query: 69 HLQLWDTAGQERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVRNWMSQLQANAYCENPDI 128 +L++WD GQ+ R +F + + D + +++L + Sbjct: 45 NLKIWDIGGQKSIRPYWRNYFDQTDALIYVIDSADSKRLSESEFELTELLQEEKMTGVPL 104 Query: 129 VLIGNKADLPDQREVNERQARELADKYGIPYFE--------TSAATGQNVEKAVETLLDL 180 ++ NK DL V A E+A + SA G +++ +E ++ Sbjct: 105 LVFANKQDL-----VGALAADEIASTLDLTSIRDRPWQIQACSAKQGTGLKEGMEWMMKQ 159 Query: 181 IM 182 + Sbjct: 160 VK 161 >4ZI3-A nrPDB Length = 190 Score = 109 bits (273), Expect = 8e-25, Method: Composition-based stats. Identities = 35/189 (18%), Positives = 66/189 (34%), Gaps = 28/189 (14%) Query: 6 YDYLIKLLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYNAQGPNGSSGKA 65 D +++L LG GKTT L + + T F K V Sbjct: 14 PDQEVRILLLGLDNAGKTTLLKQLASEDISHI---TPTQGFNIKSVQSQG---------- 60 Query: 66 FKVHLQLWDTAGQERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVRNWMSQLQANAYCEN 125 L +WD GQ + R ++F + + + D ++ F +++L Sbjct: 61 --FKLNVWDIGGQRKIRPYWRSYFENTDILIYVIDSADRKRFEETGQELTELLEEEKLSC 118 Query: 126 PDIVLIGNKADLPDQREVNERQARELADKYGIPYFE--------TSAATGQNVEKAVETL 177 +++ NK DL + A E+A+ + SA TG+ V+ + + Sbjct: 119 VPVLIFANKQDL-----LTAAPASEIAEGLNLHTIRDRVWQIQSCSALTGEGVQDGMNWV 173 Query: 178 LDLIMKRME 186 + + + Sbjct: 174 CKNVNAKKK 182 >3D6T-B nrPDB Length = 171 Score = 108 bits (269), Expect = 2e-24, Method: Composition-based stats. Identities = 40/158 (25%), Positives = 76/158 (48%), Gaps = 15/158 (9%) Query: 10 IKLLALGDSGVGKTTFLYRYTDNKFNPK--FITTVGIDFREKRVVYNAQGPNGSSGKAFK 67 +KL+ +G++G GKTT L + K + TVGID ++ + + + Sbjct: 1 MKLMIVGNTGSGKTTLLQQLMKTKKSDLGMQSATVGIDVKDWPIQIRDK-------RKRD 53 Query: 68 VHLQLWDTAGQERFRSLTTAFFRDAMGFLLMFDLTSQQS-FLNVRNWMSQLQANAYCENP 126 + L +WD AG+E F S F +L ++DL+ Q+ ++ W+ ++A A + Sbjct: 54 LVLNVWDFAGREEFYSTHPHFMTQRALYLAVYDLSKGQAEVDAMKPWLFNIKARA--SSS 111 Query: 127 DIVLIGNKADLPDQREVN---ERQARELADKYGIPYFE 161 ++L+G D+ D+++ + +EL +K G P Sbjct: 112 PVILVGTHLDVSDEKQRKACMSKITKELLNKRGFPAIR 149 >1F6B-A nrPDB Length = 198 Score = 108 bits (269), Expect = 2e-24, Method: Composition-based stats. Identities = 37/182 (20%), Positives = 72/182 (39%), Gaps = 17/182 (9%) Query: 4 GDYDYLIKLLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYNAQGPNGSSG 63 G Y KL+ LG GKTT L+ D++ + + T+ E + Sbjct: 20 GLYKKTGKLVFLGLDNAGKTTLLHMLKDDRLG-QHVPTLHPTSEELTI------------ 66 Query: 64 KAFKVHLQLWDTAGQERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVRNWMSQLQANAYC 123 + +D G + R + + G + + D + L + + L + Sbjct: 67 --AGMTFTTFDLGGHIQARRVWKNYLPAINGIVFLVDCADHERLLESKEELDSLMTDETI 124 Query: 124 ENPDIVLIGNKADLPDQREVNERQARELADKYGIPYFETSAATGQNVEKAVETLLDLIMK 183 N I+++GNK D P+ ++E + RE+ YG + S + + + +E + ++K Sbjct: 125 ANVPILILGNKIDRPEA--ISEERLREMFGLYGQTTGKGSVSLKELNARPLEVFMCSVLK 182 Query: 184 RM 185 R Sbjct: 183 RQ 184 >3BH6-A nrPDB Length = 164 Score = 104 bits (261), Expect = 2e-23, Method: Composition-based stats. Identities = 33/180 (18%), Positives = 62/180 (34%), Gaps = 28/180 (15%) Query: 10 IKLLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYNAQGPNGSSGKAFKVH 69 +++L LG GKTT L + + T F K V Sbjct: 5 VRILLLGLDNAGKTTLLKQLASEDISHI---TPTQGFNIKSVQSQG------------FK 49 Query: 70 LQLWDTAGQERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVRNWMSQLQANAYCENPDIV 129 L +WD G + R ++F + + + D ++ F +++L ++ Sbjct: 50 LNVWDIGGLRKIRPYWRSYFENTDILIYVIDSADRKRFEETGQELTELLEEEKLSCVPVL 109 Query: 130 LIGNKADLPDQREVNERQARELADKYGIPYFE--------TSAATGQNVEKAVETLLDLI 181 + NK DL + A E+A+ + SA TG+ V+ + + + Sbjct: 110 IFANKQDL-----LTAAPASEIAEGLNLHTIRDRVWQIQSCSALTGEGVQDGMNWVCKNV 164 >2GAO-A nrPDB Length = 208 Score = 103 bits (257), Expect = 7e-23, Method: Composition-based stats. Identities = 36/182 (19%), Positives = 71/182 (39%), Gaps = 17/182 (9%) Query: 4 GDYDYLIKLLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYNAQGPNGSSG 63 G Y KL+ LG GKTT L+ D++ + + T+ E + Sbjct: 30 GLYKKSGKLVFLGLDNAGKTTLLHMLKDDRLG-QHVPTLHPTSEELTI------------ 76 Query: 64 KAFKVHLQLWDTAGQERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVRNWMSQLQANAYC 123 + +D G E+ R + + G + + D + + ++ L + Sbjct: 77 --AGMTFTTFDLGGHEQARRVWKNYLPAINGIVFLVDCADHSRLVESKVELNALMTDETI 134 Query: 124 ENPDIVLIGNKADLPDQREVNERQARELADKYGIPYFETSAATGQNVEKAVETLLDLIMK 183 N I+++GNK D D ++E + RE+ YG + + + + +E + ++K Sbjct: 135 SNVPILILGNKIDRTDA--ISEEKLREIFGLYGQTTGKGNVTLKELNARPMEVFMCSVLK 192 Query: 184 RM 185 R Sbjct: 193 RQ 194 >2H57-A nrPDB Length = 190 Score = 102 bits (255), Expect = 1e-22, Method: Composition-based stats. Identities = 35/176 (19%), Positives = 69/176 (39%), Gaps = 20/176 (11%) Query: 12 LLALGDSGVGKTTFLYRYT-DNKFNPKFITTVGIDFREKRVVYNAQGPNGSSGKAFKVHL 70 +L LG GKTT + + N + + T+G K+ + Sbjct: 24 VLCLGLDNSGKTTIINKLKPSNAQSQNILPTIGFS--------------IEKFKSSSLSF 69 Query: 71 QLWDTAGQERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVRNWMSQLQANAY--CENPDI 128 ++D +GQ R+R+L ++++ + + D + + + + + L + I Sbjct: 70 TVFDMSGQGRYRNLWEHYYKEGQAIIFVIDSSDRLRMVVAKEELDTLLNHPDIKHRRIPI 129 Query: 129 VLIGNKADLPDQ-REVNERQARELADKYGIPYFETS--AATGQNVEKAVETLLDLI 181 + NK DL D V Q L + P+ + A G+ +++ V+ L D I Sbjct: 130 LFFANKMDLRDAVTSVKVSQLLCLENIKDKPWHICASDAIKGEGLQEGVDWLQDQI 185 >4WNR-A nrPDB Length = 349 Score = 99.6 bits (247), Expect = 9e-22, Method: Composition-based stats. Identities = 35/174 (20%), Positives = 68/174 (39%), Gaps = 16/174 (9%) Query: 10 IKLLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYNAQGPNGSSGKAFKVH 69 +K+L +GD GKT+ L R F+ T GI+ ++ G K ++ Sbjct: 42 VKVLLVGDGEAGKTSLLKRLLGEGFDGNEHQTQGINIKKW----------GFKDKDKEIK 91 Query: 70 LQLWDTAGQERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVRNWMSQLQANAYCENPDIV 129 + WD GQE + F ++L+ D W+ ++ ++ + ++ Sbjct: 92 VNFWDFGGQEIMHATHQFFLSKRSLYILVLDSRRD---EKAEYWLKHIR--SFGGDSPVL 146 Query: 130 LIGNKADLPDQREVNERQARELADKYGIPYFETSAATGQNVEKAVETLLDLIMK 183 + NK D E+N + +E +F S + +E + L ++K Sbjct: 147 VALNKIDENPSFELNRKFLQEKYPSIK-GFFRISCKEDRGIEGFSQKLKKELLK 199 >1M2O-B nrPDB Length = 190 Score = 95.3 bits (236), Expect = 2e-20, Method: Composition-based stats. Identities = 39/183 (21%), Positives = 62/183 (33%), Gaps = 29/183 (15%) Query: 11 KLLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYNAQGPNGSSGKAFKVHL 70 KLL LG GKTT L+ +++ T P + Sbjct: 25 KLLFLGLDNAGKTTLLHMLKNDRL-ATLQPT--------------WHPTSEELAIGNIKF 69 Query: 71 QLWDTAGQERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVRNWMSQLQANAYCENPDIVL 130 +D G + R L +F + G + + D + F R + L A ++ V+ Sbjct: 70 TTFDLGGHIQARRLWKDYFPEVNGIVFLVDAADPERFDEARVELDALFNIAELKDVPFVI 129 Query: 131 IGNKADLPDQREVNERQ---ARELADKYGIPYFE---------TSAATGQNVEKAVETLL 178 +GNK D P+ V+E + A L + G E S +A + L Sbjct: 130 LGNKIDAPNA--VSEAELRSALGLLNTTGSQRIEGQRPVEVFMCSVVMRNGYLEAFQWLS 187 Query: 179 DLI 181 I Sbjct: 188 QYI 190 >6GNI-B nrPDB Length = 167 Score = 95.0 bits (235), Expect = 2e-20, Method: Composition-based stats. Identities = 38/179 (21%), Positives = 61/179 (34%), Gaps = 29/179 (16%) Query: 11 KLLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYNAQGPNGSSGKAFKVHL 70 KLL LG GKTT L+ +++ T P + Sbjct: 3 KLLFLGLDNAGKTTLLHMLKNDRL-ATLQPT--------------WHPTSEELAIGNIKF 47 Query: 71 QLWDTAGQERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVRNWMSQLQANAYCENPDIVL 130 +D G + R L +F + G + + D + F R + L A ++ V+ Sbjct: 48 TTFDLGGHIQARRLWKDYFPEVNGIVFLVDAADPERFDEARVELDALFNIAELKDVPFVI 107 Query: 131 IGNKADLPDQREVNERQ---ARELADKYGIPYFE---------TSAATGQNVEKAVETL 177 +GNK D P+ V+E + A L + G E S +A + L Sbjct: 108 LGNKIDAPNA--VSEAELRSALGLLNTTGSQRIEGQRPVEVFMCSVVMRNGYLEAFQWL 164 >4BAS-A nrPDB Length = 199 Score = 88.8 bits (219), Expect = 2e-18, Method: Composition-based stats. Identities = 26/192 (13%), Positives = 62/192 (32%), Gaps = 24/192 (12%) Query: 4 GDYDYLIKLLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYNAQGPNGSSG 63 G ++++ G GKTT + + + + K I T + + + Sbjct: 12 GQSKTKLQVVMCGLDNSGKTTIINQVKPAQSSSKHI-TATVGYNVETFE----------- 59 Query: 64 KAFKVHLQLWDTAGQERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVRNWMSQLQANAYC 123 +V ++D G ++FR L ++ + + + D + V++ + + + Sbjct: 60 -KGRVAFTVFDMGGAKKFRGLWETYYDNIDAVIFVVDSSDHLRLCVVKSEIQAMLKHEDI 118 Query: 124 E-------NPDIVLIGNKADLPDQRE----VNERQARELADKYGIPYFETSAATGQNVEK 172 + NK D + V L + F ++ G V + Sbjct: 119 RRELPGGGRVPFLFFANKMDAAGAKTAAELVEILDLTTLMGDHPFVIFASNGLKGTGVHE 178 Query: 173 AVETLLDLIMKR 184 L + ++ Sbjct: 179 GFSWLQETASRQ 190 >5DI3-B nrPDB Length = 263 Score = 85.7 bits (211), Expect = 2e-17, Method: Composition-based stats. Identities = 32/197 (16%), Positives = 69/197 (35%), Gaps = 27/197 (13%) Query: 12 LLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYNAQGPNGSSGKAFKVHLQ 71 + LG GKTT L + + T G + ++ K ++ Sbjct: 7 IALLGLDNAGKTTLLNS-IQGEVDRDTTPTFGFN--------------STTLNEGKYKIE 51 Query: 72 LWDTAGQERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVRNWMSQLQANAYCENPDIVLI 131 ++D G + R + + + + + D F + M+++ N + + I + Sbjct: 52 VFDLGGGKNIRGVWKKYLAEVHAIVYVVDAADPGRFEESKMTMAEVLENQFMRDKPICIF 111 Query: 132 GNKADLP---DQREVNERQARE-LADKYGIPYFETSAA--TGQNVE----KAVETLLDLI 181 NK DLP EV + + + + F +A GQ+V+ ++ L+ + Sbjct: 112 ANKQDLPTAAPAAEVVKGLGLATCRNSHNV--FPCTAKMPAGQDVDHRLRDGLKWLVGTV 169 Query: 182 MKRMEQCVEKTQIPDTV 198 + + + Q Sbjct: 170 DREFGRLDPRVQTEAEE 186 >4M9Q-A nrPDB Length = 227 Score = 85.7 bits (211), Expect = 2e-17, Method: Composition-based stats. Identities = 32/197 (16%), Positives = 69/197 (35%), Gaps = 27/197 (13%) Query: 12 LLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYNAQGPNGSSGKAFKVHLQ 71 + LG GKTT L + + T G + ++ K ++ Sbjct: 7 IALLGLDNAGKTTLLNS-IQGEVDRDTTPTFGFN--------------STTLNEGKYKIE 51 Query: 72 LWDTAGQERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVRNWMSQLQANAYCENPDIVLI 131 ++D G + R + + + + + D F + M+++ N + + I + Sbjct: 52 VFDLGGGKNIRGVWKKYLAEVHAIVYVVDAADPGRFEESKMTMAEVLENQFMRDKPICIF 111 Query: 132 GNKADLP---DQREVNERQARE-LADKYGIPYFETSAA--TGQNVE----KAVETLLDLI 181 NK DLP EV + + + + F +A GQ+V+ ++ L+ + Sbjct: 112 ANKQDLPTAAPAAEVVKGLGLATCRNSHNV--FPCTAKMPAGQDVDHRLRDGLKWLVGTV 169 Query: 182 MKRMEQCVEKTQIPDTV 198 + + + Q Sbjct: 170 DREFGRLDPRVQTEAEE 186 >3IHW-A nrPDB Length = 184 Score = 84.6 bits (208), Expect = 3e-17, Method: Composition-based stats. Identities = 37/175 (21%), Positives = 71/175 (40%), Gaps = 20/175 (11%) Query: 10 IKLLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYNAQGPNGSSGKAFKVH 69 +K+ +G+ GK+ ++RY + + G F+ K +V + Q Sbjct: 21 LKVGIVGNLSSGKSALVHRYLTGTYVQEESPE-GGRFK-KEIVVDGQSYL---------- 68 Query: 70 LQLWDTAGQERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVRNWMSQLQANAYCENPDIV 129 L + D G F + +F L + SF V N+ +L + +V Sbjct: 69 LLIRDEGGPPEL-----QFAAWVDAVVFVFSLEDEISFQTVYNYFLRLCSFRNASEVPMV 123 Query: 130 LIGNK--ADLPDQREVNERQARELADKYG-IPYFETSAATGQNVEKAVETLLDLI 181 L+G + + R +++ +AR+L+ Y+ET A G NVE+ + + + Sbjct: 124 LVGTQDAISAANPRVIDDSRARKLSTDLKRCTYYETCATYGLNVERVFQDVAQKV 178 >2IWR-A nrPDB Length = 178 Score = 77.6 bits (190), Expect = 3e-15, Method: Composition-based stats. Identities = 37/187 (19%), Positives = 70/187 (37%), Gaps = 24/187 (12%) Query: 10 IKLLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYNAQGPNGSSGKAFKVH 69 ++L LGD+ GK++ ++R+ + EK + G+ V Sbjct: 8 LRLGVLGDARSGKSSLIHRFLTGSYQ----------VLEKTESEQYKKEMLVDGQTHLVL 57 Query: 70 LQLWDTAGQERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVRNWMSQL--QANAYCENPD 127 + +E + F A + +F L + SF V QL Sbjct: 58 I-------REEAGAPDAKFSGWADAVIFVFSLEDENSFQAVSRLHGQLSSLRGEGRGGLA 110 Query: 128 IVLIGNK--ADLPDQREVNERQARE-LADKYGIPYFETSAATGQNVEKAVETLLDLI--M 182 + L+G + R V + +AR AD Y+ET A G NV++ + + + + Sbjct: 111 LALVGTQDRISASSPRVVGDARARALCADMKRCSYYETCATYGLNVDRVFQEVAQKVVTL 170 Query: 183 KRMEQCV 189 ++ +Q + Sbjct: 171 RKQQQLL 177 >6GDG-D nrPDB Length = 248 Score = 69.5 bits (169), Expect = 9e-13, Method: Composition-based stats. Identities = 26/137 (18%), Positives = 44/137 (32%), Gaps = 13/137 (9%) Query: 6 YDYLIKLLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYNAQGPNGSSGKA 65 Y +LL LG GK+T + + I G + + Sbjct: 32 YRATHRLLLLGADNSGKSTIVKQMR-------------ILHGGSGGSGGTSGIFETKFQV 78 Query: 66 FKVHLQLWDTAGQERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVRNWMSQLQANAYCEN 125 KV+ ++D GQ R F D + + D + N + N + Sbjct: 79 DKVNFHMFDVGGQRDERRKWIQCFNDVTAIIFVVDSSDYNRLQEALNLFKSIWNNRWLRT 138 Query: 126 PDIVLIGNKADLPDQRE 142 ++L NK DL ++ Sbjct: 139 ISVILFLNKQDLLAEKV 155 >3T1O-A nrPDB Length = 198 Score = 69.5 bits (169), Expect = 1e-12, Method: Composition-based stats. Identities = 38/188 (20%), Positives = 74/188 (39%), Gaps = 10/188 (5%) Query: 5 DYDYLIKLLALGDSGVGKTT-FLYRYTDNKFNPKFITTVGIDFREKRVVYNAQGPNGSSG 63 + + K++ G GKTT + Y+ K E+ + ++ + Sbjct: 10 NREINFKIVYYGPGLSGKTTNLKWIYSKVPEGRKGEMVSLATEDERTLFFDFLPLDIGEV 69 Query: 64 KAFKVHLQLWDTAGQERFRSLTTAFFRDAMGFLLMFDLT------SQQSFLNVRNWMSQL 117 K FK L+ GQ + + R G + + D + +S N+R +++ Sbjct: 70 KGFKTRFHLYTVPGQVFYNASRKLILRGVDGIVFVADSAPNRLRANAESMRNMRENLAE- 128 Query: 118 QANAYCENPDIVLIGNKADLPDQREVNERQARELADKYGIPYFETSAATGQNVEKAVETL 177 ++ IV+ NK DLPD V +A + + P E A G+ V + ++ + Sbjct: 129 -YGLTLDDVPIVIQVNKRDLPDALPVEMVRAV-VDPEGKFPVLEAVATEGKGVFETLKEV 186 Query: 178 LDLIMKRM 185 L++ R+ Sbjct: 187 SRLVLARV 194 >6CES-A nrPDB Length = 313 Score = 66.1 bits (160), Expect = 1e-11, Method: Composition-based stats. Identities = 37/168 (22%), Positives = 67/168 (39%), Gaps = 28/168 (16%) Query: 11 KLLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDF---REKRVVYNAQGPNGSSGKAFK 67 K+L +G SG GKT+ + + ++ +R+ + Sbjct: 9 KVLLMGKSGSGKTSM-------------RSIIFANYIARDTRRLGATIDVEHSHVRFLGN 55 Query: 68 VHLQLWDTAGQERF-----RSLTTAFFRDAMGFLLMFDLTSQQSFLNVRNWMSQLQAN-A 121 + L LWD GQ+ F S FR+ + +FD+ S++ ++ + S L+A Sbjct: 56 LVLNLWDCGGQDTFMENYFTSQRDNIFRNVEVLIYVFDVESRELEKDMHYYQSCLEAILQ 115 Query: 122 YCENPDIVLIGNKADL--PDQREVNERQARE----LADKYGIPYFETS 163 + I + +K DL DQR++ ++ E L+ F TS Sbjct: 116 NSPDAKIFCLVHKMDLVQEDQRDLIFKEREEDLRRLSRPLECACFRTS 163 >4C0K-A nrPDB Length = 423 Score = 64.5 bits (156), Expect = 3e-11, Method: Composition-based stats. Identities = 30/149 (20%), Positives = 54/149 (36%), Gaps = 12/149 (8%) Query: 9 LIKLLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYNAQGPNGSSGKAFKV 68 + K +G G GKT +G +F+ V N + Sbjct: 246 VYKCHVIGPKGSGKTGM----CRGFLVEDMHKLIGKEFKTNVV----NCINSVQVYGQEK 297 Query: 69 HLQLWDTAGQERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVRNWMSQLQANAYCENPDI 128 HL L D + L + L++D ++ +SF V ++ A + Sbjct: 298 HLILRDIDVRHALDPLQPQEV-NCDVACLVYDSSNPRSFEYVARIY--IKYYAES-KIPV 353 Query: 129 VLIGNKADLPDQREVNERQARELADKYGI 157 +++G K D+ ++R+ Q E DKY + Sbjct: 354 MIVGTKCDMDERRQDYLMQPSEFCDKYKL 382 >6G79-A nrPDB Length = 225 Score = 61.8 bits (149), Expect = 2e-10, Method: Composition-based stats. Identities = 27/128 (21%), Positives = 41/128 (32%), Gaps = 13/128 (10%) Query: 10 IKLLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYNAQGPNGSSGKAFKVH 69 +KLL LG GK+T + + I G + +H Sbjct: 31 VKLLLLGADNSGKSTIVKQMK-------------IIHGGSGGSGGTTGIVETHFTFKNLH 77 Query: 70 LQLWDTAGQERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVRNWMSQLQANAYCENPDIV 129 +L+D GQ R F D + DL+ + N + + I+ Sbjct: 78 FRLFDVGGQRSERKKWIHCFEDVTAIIFCVDLSDYNRMHESLMLFDSICNNKFFIDTSII 137 Query: 130 LIGNKADL 137 L NK DL Sbjct: 138 LFLNKKDL 145 >5YMX-A nrPDB Length = 203 Score = 61.1 bits (147), Expect = 4e-10, Method: Composition-based stats. Identities = 36/185 (19%), Positives = 69/185 (37%), Gaps = 23/185 (12%) Query: 11 KLLALGDSGVGKTT-FLYRY------TDNKFNPKFITTVGIDFREKRVVYNAQGPNGSSG 63 K++ G GKTT Y Y T K T ++ + ++ + Sbjct: 14 KIVYYGPGLCGKTTNLQYIYNKTAAETKGKLISLSTET------DRTLFFDFLPLSLGEI 67 Query: 64 KAFKVHLQLWDTAGQERFRSLTTAFFRDAMGFLLMFDL------TSQQSFLNVRNWMSQL 117 + FK L+ GQ + + + G + + D + +S N+R ++ Sbjct: 68 RGFKTRFHLYTVPGQVFYDASRKLILKGVDGVVFVADSQIERMEANMESLENLR--INLA 125 Query: 118 QANAYCENPDIVLIGNKADLPDQREVNERQARELADKYGIPYFETSAATGQNVEKAVETL 177 + V+ NK DLP+ V + R+ + IP ++ A TG V ++ + Sbjct: 126 EQGYDLNKIPYVIQYNKRDLPNA--VTVEEMRKALNHRNIPEYQAVAPTGVGVFDTLKAV 183 Query: 178 LDLIM 182 L++ Sbjct: 184 AKLVL 188 >6IAE-A nrPDB Length = 223 Score = 61.1 bits (147), Expect = 4e-10, Method: Composition-based stats. Identities = 41/217 (18%), Positives = 81/217 (37%), Gaps = 17/217 (7%) Query: 7 DYLIKLLALGDSGVGKTTFLYRY--TDNKFNPKFITTVGIDFREKRVVYNAQGPNGSSGK 64 D L+K+L LG S GK+T T + ++ T + E + + +G Sbjct: 7 DDLVKILVLGPSKSGKSTVTNFLAGTRDTPTKEYHETNPLRVLEVEIALDDTRRSGRQAA 66 Query: 65 A-FKVHLQLWDTAGQERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVRNWMSQ--LQANA 121 K +QLWD G + ++ A +A G + +F+ + S + W L + Sbjct: 67 GLKKAVVQLWDVGGSSKHQAGWPAIASNADGIIYVFNPEVKGSEKELLLWYKNFALNQDE 126 Query: 122 YCENPDI---------VLIGNKADLPDQREVNERQARELADKY-GIPYFETSAA-TGQNV 170 ++ + ++ + + LP + V + + + GI ETS N Sbjct: 127 LDDDNNFKMRVTDGHSLIFSHHSSLP-EFAVGDNAIPPMPKQLQGIRALETSLDYQSDNF 185 Query: 171 EKAVETLLDLIMKRMEQCVEKTQIPDTVNGGNSGNLD 207 ++A + L++ I+ E + + L Sbjct: 186 KEAFDALVEQIIASRLAAEENDLLQKEREAKDYPRLK 222 >5J8B-z nrPDB Length = 679 Score = 56.4 bits (135), Expect = 8e-09, Method: Composition-based stats. Identities = 38/173 (21%), Positives = 69/173 (39%), Gaps = 20/173 (11%) Query: 21 GKTTFLYRY-------TDNKFNPKFITTVGIDFREKRVVYNAQGPNGS--SGKAFKVHLQ 71 GK+T R +D + +F+ ++ ++ RE+ + A + + + Sbjct: 90 GKSTLADRILELTHAVSDREMREQFLDSLELE-RERGITIKASAVRVTYRAKDGEEYVFH 148 Query: 72 LWDTAGQERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVRNWMSQLQANAYCENPDIVLI 131 L DT G F + G LL+ D + + + L+ I+ + Sbjct: 149 LIDTPGHVDFTYEVSRALAAVEGVLLVVDASQGVEAETLAKFYMALEHGH-----VIIPV 203 Query: 132 GNKADLPDQREVNERQARELADKYGIPYFET---SAATGQNVEKAVETLLDLI 181 NK DLP+ R A E+ + G+P E S TG+ VE+ +E ++ I Sbjct: 204 INKIDLPNAR--PLEVALEVEEVLGLPADEAIFASGKTGEGVEEILEAIVQRI 254 >5IMR-C nrPDB Length = 610 Score = 56.4 bits (135), Expect = 9e-09, Method: Composition-based stats. Identities = 38/173 (21%), Positives = 69/173 (39%), Gaps = 20/173 (11%) Query: 21 GKTTFLYRY-------TDNKFNPKFITTVGIDFREKRVVYNAQGPNGS--SGKAFKVHLQ 71 GK+T R +D + +F+ ++ ++ RE+ + A + + + Sbjct: 21 GKSTLADRILELTHAVSDREMREQFLDSLELE-RERGITIKASAVRVTYRAKDGEEYVFH 79 Query: 72 LWDTAGQERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVRNWMSQLQANAYCENPDIVLI 131 L DT G F + G LL+ D + + + L+ I+ + Sbjct: 80 LIDTPGHVDFTYEVSRALAAVEGVLLVVDASQGVEAETLAKFYMALEHGH-----VIIPV 134 Query: 132 GNKADLPDQREVNERQARELADKYGIPYFET---SAATGQNVEKAVETLLDLI 181 NK DLP+ R A E+ + G+P E S TG+ VE+ +E ++ I Sbjct: 135 INKIDLPNAR--PLEVALEVEEVLGLPADEAIFASGKTGEGVEEILEAIVQRI 185 >2GJ9-A nrPDB Length = 172 Score = 56.1 bits (134), Expect = 1e-08, Method: Composition-based stats. Identities = 30/170 (17%), Positives = 52/170 (30%), Gaps = 28/170 (16%) Query: 10 IKLLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYNAQGPNGSSGKAFKVH 69 +K++ G GK++ L + V + + + Sbjct: 5 MKVVIAGRPNAGKSSLLNALAGRE-----AAIVTD------IAGTTRDVLREHIHIDGMP 53 Query: 70 LQLWDTAGQ-------ERFRSLTT-AFFRDAMGFLLMFDLTSQQSFLNVRNWMSQLQANA 121 L + DTAG ER A L M D T+ + W + Sbjct: 54 LHIIDTAGLREASDEVERIGIERAWQEIEQADRVLFMVDGTTTDAVDPAEIWPEFI--AR 111 Query: 122 YCENPDIVLIGNKADLPDQREVNERQARELADKYGIPYFETSAATGQNVE 171 I ++ NKAD+ + +++ G SA TG+ V+ Sbjct: 112 LPAKLPITVVRNKADI-------TGETLGMSEVNGHALIRLSARTGEGVD 154 >1XZP-A nrPDB Length = 482 Score = 56.1 bits (134), Expect = 1e-08, Method: Composition-based stats. Identities = 35/191 (18%), Positives = 73/191 (38%), Gaps = 32/191 (16%) Query: 10 IKLLALGDSGVGKTTFLYRYT-DNKFNPKFITTVGIDFREKRVVYNAQGPNGSSGKAFKV 68 ++++ +G VGK+T L R +++ I D + +V + Sbjct: 244 LRMVIVGKPNVGKSTLLNRLLNEDRAIVTDIPGTTRDVISEEIVIRG------------I 291 Query: 69 HLQLWDTAG--------QERFRSLTTAF-FRDAMGFLLMFDLTSQQSFLNVRNWMSQLQA 119 ++ DTAG ER T A L + D +S + R + +++ Sbjct: 292 LFRIVDTAGVRSETNDLVERLGIERTLQEIEKADIVLFVLDASSPLDEED-RKILERIKN 350 Query: 120 NAYCENPDIVLIGNKADLPDQREVNERQARELADKYGIPYFETSAATGQNVEKAVETLLD 179 Y +++ NK D+ ++ +NE + + + SA G+ +EK E++ Sbjct: 351 KRY------LVVINKVDVVEK--INEEEIKNKLGT-DRHMVKISALKGEGLEKLEESIYR 401 Query: 180 LIMKRMEQCVE 190 + E+ + Sbjct: 402 ETQEIFERGSD 412 >2CXX-A nrPDB Length = 190 Score = 55.3 bits (132), Expect = 2e-08, Method: Composition-based stats. Identities = 35/196 (17%), Positives = 72/196 (36%), Gaps = 27/196 (13%) Query: 12 LLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYNAQGPNGSSGKAFKVHL- 70 ++ G S VGK+T +YR T K G+ + + + G F + L Sbjct: 4 IIFAGRSNVGKSTLIYRLTGKKVRRGKRP--GVTRKIIEIEWKNHKIIDMPGFGFMMGLP 61 Query: 71 -QLWDTAGQERFRSLTTAFF----RDAMGFLLMFDLTSQQSFLNVRNWMS--------QL 117 ++ QER + F ++ +L+ D + + ++ W + Sbjct: 62 KEV-----QERIKDEIVHFIEDNAKNIDVAVLVVD--GKAAPEIIKRWEKRGEIPIDVEF 114 Query: 118 QANAYCENPDIVLIGNKAD-LPDQREVNERQAREL---ADKYGIPYFETSAATGQNVEKA 173 + ++ NK D + + +EV A + + + SA G N+E+ Sbjct: 115 YQFLRELDIPTIVAVNKLDKIKNVQEVINFLAEKFEVPLSEIDKVFIPISAKFGDNIERL 174 Query: 174 VETLLDLIMKRMEQCV 189 + ++I +R + V Sbjct: 175 KNRIFEVIRERQGRRV 190 >2GTP-A nrPDB Length = 323 Score = 55.3 bits (132), Expect = 2e-08, Method: Composition-based stats. Identities = 28/185 (15%), Positives = 52/185 (28%), Gaps = 39/185 (21%) Query: 36 PKFITTVGIDFREKRVVYNAQGPNGSSGKAFKVHLQLWDTAGQERFRSLTTAFFRDAMGF 95 P +I T R + G + +H +++D GQ R F Sbjct: 134 PNYIPTQQDVLRTR---VKTTGIVETHFTFKDLHFKMFDVGGQRSERKKWIHCFEGVTAI 190 Query: 96 LLMFDLTS----------QQSFLNVRNWMSQLQANAYCENPDIVLIGNKADLPDQR---- 141 + L+ + N + + I+L NK DL +++ Sbjct: 191 IFCVALSDYDLVLAEDEEMNRMHESMKLFDSICNNKWFTDTSIILFLNKKDLFEEKIKKS 250 Query: 142 ----------------------EVNERQARELADKYGIPYFETSAATGQNVEKAVETLLD 179 + + D I T A +NV+ + + D Sbjct: 251 PLTICYPEYAGSNTYEEAAAYIQCQFEDLNKRKDTKEIYTHFTCATDTKNVQFVFDAVTD 310 Query: 180 LIMKR 184 +I+K Sbjct: 311 VIIKN 315 Score = 27.6 bits (60), Expect = 4.0, Method: Composition-based stats. Identities = 8/19 (42%), Positives = 12/19 (63%) Query: 10 IKLLALGDSGVGKTTFLYR 28 +KLL LG GK+T + + Sbjct: 3 VKLLLLGAGESGKSTIVKQ 21 >4ARZ-A nrPDB Length = 310 Score = 54.9 bits (131), Expect = 3e-08, Method: Composition-based stats. Identities = 33/163 (20%), Positives = 59/163 (36%), Gaps = 27/163 (16%) Query: 11 KLLALGDSGVGKTTFLYRYTDNKFNPKFITTVGID---FREKRVVYNAQGPNGSSGKAFK 67 KLL +G SG GK++ + + + F +R+ + Sbjct: 8 KLLLMGRSGSGKSSM-------------RSIIFSNYSAFDTRRLGATIDVEHSHLRFLGN 54 Query: 68 VHLQLWDTAGQE-----RFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVRNWMSQLQA-NA 121 + L LWD GQ+ F F+ + +FD+ S + ++ + L+ Sbjct: 55 MTLNLWDCGGQDVFMENYFTKQKDHIFQMVQVLIHVFDVESTEVLKDIEIFAKALKQLRK 114 Query: 122 YCENPDIVLIGNKADLPDQREVNERQARELADKYGIPYFETSA 164 Y + I ++ +K DL V + EL ETS+ Sbjct: 115 YSPDAKIFVLLHKMDL-----VQLDKREELFQIMMKNLSETSS 152 >3GEH-A nrPDB Length = 462 Score = 53.4 bits (127), Expect = 7e-08, Method: Composition-based stats. Identities = 29/193 (15%), Positives = 71/193 (36%), Gaps = 38/193 (19%) Query: 10 IKLLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYNAQGPNGSSGKAFKVH 69 +K+ +G VGK++ L ++ ++ +V + G ++ V Sbjct: 225 LKVAIVGRPNVGKSSLLNAWSQ---------------SDRAIVTDLPGTTRDVVESQLVV 269 Query: 70 ----LQLWDTAG------Q-ERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVRNWMS-QL 117 +Q+ DTAG Q E+ + + +L+ + W + Sbjct: 270 GGIPVQVLDTAGIRETSDQVEKIGVERSRQAANTADLVLL-------TIDAATGWTTGDQ 322 Query: 118 QANAYCENPDIVLIGNKADLPDQREVNERQARELADKYGIPYFETSAATGQNVEKAVETL 177 + ++ ++L+ NK DL +++ + + + T+AA Q ++ + Sbjct: 323 EIYEQVKHRPLILVMNKIDLVEKQLITSLE----YPENITQIVHTAAAQKQGIDSLETAI 378 Query: 178 LDLIMKRMEQCVE 190 L+++ Q + Sbjct: 379 LEIVQTGKVQAAD 391 >6D4G-A nrPDB Length = 271 Score = 53.0 bits (126), Expect = 9e-08, Method: Composition-based stats. Identities = 45/223 (20%), Positives = 75/223 (33%), Gaps = 57/223 (25%) Query: 16 GDSGVGKTTFLYRYTD---NKFNPKFITTV-GIDFREKRVVYNA----QGPNGSSGKAFK 67 G G+GK+ R+ ++F+ + + DF + V + + S + Sbjct: 34 GQCGIGKSCLCNRFVRPSADEFHLDHTSVLSTSDFGGRVVNNDHFLYWGEVSRSLEDCVE 93 Query: 68 VHLQLW-------DTAGQ-ERFRSLTTAFFRDA--------------------------- 92 + + D Q R +L R A Sbjct: 94 CKMHIVEQTEFIDDQTFQPHRSTALQPYIKRAAATKLASAEKLMYFCTDQLGLEQDFEQK 153 Query: 93 ---------MGFLLMFDLTSQ--QSFLNVRNWMSQLQANAYCENPDIVLIGNKADLPDQR 141 GFLL D++ ++F + ++S L IV++ K D +R Sbjct: 154 QMPDGKLLVDGFLLGIDVSRGMNRNFDDQLKFVSNLYNQLAKTKKPIVIVLTKCDEGVER 213 Query: 142 EVNERQARELA-DKYGIPYFETSAATGQNVEKAVETLLDLIMK 183 + R A A K + ETSA + NV+ A TL+ LI K Sbjct: 214 YI--RDAHTFALSKKNLQVVETSARSNVNVDLAFSTLVQLIDK 254 >3C5H-A nrPDB Length = 255 Score = 53.0 bits (126), Expect = 1e-07, Method: Composition-based stats. Identities = 45/223 (20%), Positives = 75/223 (33%), Gaps = 57/223 (25%) Query: 16 GDSGVGKTTFLYRYTD---NKFNPKFITTV-GIDFREKRVVYNA----QGPNGSSGKAFK 67 G G+GK+ R+ ++F+ + + DF + V + + S + Sbjct: 35 GQCGIGKSCLCNRFVRPSADEFHLDHTSVLSTSDFGGRVVNNDHFLYWGEVSRSLEDCVE 94 Query: 68 VHLQLW-------DTAGQ-ERFRSLTTAFFRDA--------------------------- 92 + + D Q R +L R A Sbjct: 95 CKMHIVEQTEFIDDQTFQPHRSTALQPYIKRAAATKLASAEKLMYFCTDQLGLEQDFEQK 154 Query: 93 ---------MGFLLMFDLTSQ--QSFLNVRNWMSQLQANAYCENPDIVLIGNKADLPDQR 141 GFLL D++ ++F + ++S L IV++ K D +R Sbjct: 155 QMPDGKLLVDGFLLGIDVSRGMNRNFDDQLKFVSNLYNQLAKTKKPIVVVLTKCDEGVER 214 Query: 142 EVNERQARELA-DKYGIPYFETSAATGQNVEKAVETLLDLIMK 183 + R A A K + ETSA + NV+ A TL+ LI K Sbjct: 215 YI--RDAHTFALSKKNLQVVETSARSNVNVDLAFSTLVQLIDK 255 >2E87-A nrPDB Length = 357 Score = 52.6 bits (125), Expect = 1e-07, Method: Composition-based stats. Identities = 26/186 (13%), Positives = 59/186 (31%), Gaps = 35/186 (18%) Query: 12 LLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYNAQGPNGSSGKAFKVHLQ 71 ++ G VGK+T L T K F + + + Q Sbjct: 170 VVIAGHPNVGKSTLLKALTTAKPEIASYP-----FTTRGINV-------GQFEDGYFRYQ 217 Query: 72 LWDTAGQERFRSLTTAFFRD-------------AMGFLLMFDLTSQQSF--LNVRNWMSQ 116 + DT G R+ + +FD + F + + Sbjct: 218 IIDTPGLLD----RPISERNEIEKQAILALRYLGNLIIYIFDPSEHCGFPLEEQIHLFEE 273 Query: 117 LQANAYCENPDIVLIGNKADLPDQREVNERQARELADKYGIPYFETSAATGQNVEKAVET 176 + + ++ +++ NK D+ D+ + + + + G+ + SA G ++ E Sbjct: 274 V--HGEFKDLPFLVVINKIDVADEENIKRLE--KFVKEKGLNPIKISALKGTGIDLVKEE 329 Query: 177 LLDLIM 182 ++ + Sbjct: 330 IIKTLR 335 >2LKD-A nrPDB Length = 178 Score = 52.2 bits (124), Expect = 2e-07, Method: Composition-based stats. Identities = 31/167 (18%), Positives = 59/167 (35%), Gaps = 29/167 (17%) Query: 21 GKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYNAQGPNGSSGKAFKVHLQLWDTAGQER 80 GKTT L +K + + +V N + + DT G E Sbjct: 20 GKTTLLDAIRHSKVTEQEAGGITQHIGAYQVTVNDK------------KITFLDTPGHEA 67 Query: 81 FRSLTTAFFRDAMGFLLMFDLTS---QQSFLNVRNWMSQLQANAYCENPDIVLIGNKADL 137 F ++ + +L+ Q+ + +A N I++ NK D Sbjct: 68 FTTMRARGAQVTDIVILVVAADDGVMPQTVEAI--------NHAKAANVPIIVAINKMDK 119 Query: 138 PD---QREVNERQARELA-DKYG--IPYFETSAATGQNVEKAVETLL 178 P+ R + E L +++G + + SA T + ++ +E +L Sbjct: 120 PEANPDRVMQELMEYNLVPEEWGGDTIFCKLSAKTKEGLDHLLEMIL 166 >1MKY-A nrPDB Length = 439 Score = 52.2 bits (124), Expect = 2e-07, Method: Composition-based stats. Identities = 39/203 (19%), Positives = 78/203 (38%), Gaps = 41/203 (20%) Query: 12 LLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYNAQGPNGSSGKAFKVHLQ 71 +L +G VGK+T + K V + + P + + + + Sbjct: 4 VLIVGRPNVGKSTLFNKLVKKK-----KAIVEDE------EGVTRDPVQDTVEWYGKTFK 52 Query: 72 LWDTAG-----QE----RFRSLTTAFFRDAMGFLLMFD----LTSQQSFLNVRNWMSQLQ 118 L DT G Q+ + + +T R+A L + D +T + ++ +++ + Sbjct: 53 LVDTCGVFDNPQDIISQKMKEVTLNMIREADLVLFVVDGKRGITKED--ESLADFLRK-- 108 Query: 119 ANAYCENPDIVLIGNKADLPDQREVNERQARELADKYGIPYFE---TSAATGQNVEKAVE 175 D +L+ NKA + RE EL Y + + E SA N++ +E Sbjct: 109 -----STVDTILVANKA--ENLREFEREVKPEL---YSLGFGEPIPVSAEHNINLDTMLE 158 Query: 176 TLLDLIMKRMEQCVEKTQIPDTV 198 T++ + ++ K +I D + Sbjct: 159 TIIKKLEEKGLDLESKPEITDAI 181 Score = 46.0 bits (108), Expect = 1e-05, Method: Composition-based stats. Identities = 32/187 (17%), Positives = 60/187 (32%), Gaps = 37/187 (19%) Query: 10 IKLLALGDSGVGKTTFLYRYTDNKFNPKFITTVGI--DFREKRVVYNAQGPNGSSGKAFK 67 IK+ +G VGK+T + + G D + V + + Sbjct: 181 IKVAIVGRPNVGKSTLFNAILNKE-RALVSPIPGTTRDPVDDEVFIDGRKYVFV------ 233 Query: 68 VHLQLWDTAGQ-----------ERFRSLTTA-FFRDAMGFLLMFDLTSQQSFLNVRNWMS 115 DTAG E++ + A +++ D T + Sbjct: 234 ------DTAGLRRKSRVEPRTVEKYSNYRVVDSIEKADVVVIVLDAT-----QGITRQDQ 282 Query: 116 QLQANAYCENPDIVLIGNKADLPDQREVNERQARELADKYGI-----PYFETSAATGQNV 170 ++ V++ NK DL RE + +L + P TSA G N+ Sbjct: 283 RMAGLMERRGRASVVVFNKWDLVVHREKRYDEFTKLFREKLYFIDYSPLIFTSADKGWNI 342 Query: 171 EKAVETL 177 ++ ++ + Sbjct: 343 DRMIDAM 349 >3CB4-D nrPDB Length = 599 Score = 51.0 bits (121), Expect = 3e-07, Method: Composition-based stats. Identities = 31/173 (17%), Positives = 52/173 (30%), Gaps = 20/173 (11%) Query: 21 GKTTF---LYRYTDNKFNPKFITTVGIDFREK-----RVVYNAQGPNGSSGKAFKVHLQL 72 GK+T + + + + V + + + + + L Sbjct: 16 GKSTLSDRIIQICGGLSDREMEAQVLDSMDLERERGITIKAQSVTLDYKASDGETYQLNF 75 Query: 73 WDTAGQERFRSLTTAFFRDAMGFLLMFDL---TSQQSFLNVRNWMSQLQANAYCENPDIV 129 DT G F + G LL+ D Q+ N M E ++ Sbjct: 76 IDTPGHVDFSYEVSRSLAACEGALLVVDAGQGVEAQTLANCYTAMEM-----DLEVVPVL 130 Query: 130 LIGNKADLPD-QREVNERQARELADKYGIPYFETSAATGQNVEKAVETLLDLI 181 NK DLP E + ++ SA TG V+ +E L+ I Sbjct: 131 ---NKIDLPAADPERVAEEIEDIVGIDATDAVRCSAKTGVGVQDVLERLVRDI 180 >4QJ3-A nrPDB Length = 379 Score = 50.3 bits (119), Expect = 6e-07, Method: Composition-based stats. Identities = 29/186 (15%), Positives = 59/186 (31%), Gaps = 41/186 (22%) Query: 35 NPKFITTVGIDFREKRVVYNAQGPNGSSGKAFKVHLQLWDTAGQERFRSLTTAFFRDAMG 94 +P ++ T RV G V ++ D GQ R F + Sbjct: 189 DPSYLPTQQD---VLRVRVPTTGIIEYPFDLQSVIFRMVDVGGQRSERRKWIHCFENVTS 245 Query: 95 FLLM-----FD-----LTSQQSFLNVRNWMSQLQANAYCENPDIVLIGNKADLPDQR--- 141 + + +D ++ + + + +N ++L NK DL +++ Sbjct: 246 IMFLVALSEYDQVLVESDNENRMEESKALFRTIITYPWFQNSSVILFLNKKDLLEEKIMY 305 Query: 142 -------------EVNERQAREL-----------ADKYGIPYFETSAATGQNVEKAVETL 177 + + + ARE +DK +F T A +N+ + Sbjct: 306 SHLVDYFPEYDGPQRDAQAAREFILKMFVDLNPDSDKIIYSHF-TCATDTENIRFVFAAV 364 Query: 178 LDLIMK 183 D I++ Sbjct: 365 KDTILQ 370 Score = 27.2 bits (59), Expect = 5.3, Method: Composition-based stats. Identities = 9/19 (47%), Positives = 13/19 (68%) Query: 10 IKLLALGDSGVGKTTFLYR 28 +KLL LG GK+TF+ + Sbjct: 60 LKLLLLGTGESGKSTFIKQ 78 >3V00-C nrPDB Length = 356 Score = 49.9 bits (118), Expect = 7e-07, Method: Composition-based stats. Identities = 28/184 (15%), Positives = 55/184 (29%), Gaps = 39/184 (21%) Query: 36 PKFITTVGIDFREKRVVYNAQGPNGSSGKAFKVHLQLWDTAGQERFRSLTTAFFRDAMGF 95 P ++ T R + G + ++ +++D GQ R F Sbjct: 167 PGYVPTEQDVLRSR---VKTTGIIETQFSFKDLNFRMFDVGGQRSERKKWIHCFEGVTAI 223 Query: 96 LLMFDLTS----------QQSFLNVRNWMSQLQANAYCENPDIVLIGNKADLPDQR---- 141 + L+ + + + N + + I+L NK DL +++ Sbjct: 224 IFCVALSDYDLVLAEDEEMNRMHESMHLFNSICNNKWFTDTSIILFLNKKDLFEEKIKKS 283 Query: 142 ----------------------EVNERQARELADKYGIPYFETSAATGQNVEKAVETLLD 179 +V + D I T A QNV+ + + D Sbjct: 284 PLTICYPEYAGSNTYEEAGNYIKVQFLELNMRRDVKEIYSHMTCATDTQNVKFVFDAVTD 343 Query: 180 LIMK 183 +I+K Sbjct: 344 IIIK 347 Score = 27.9 bits (61), Expect = 3.5, Method: Composition-based stats. Identities = 10/27 (37%), Positives = 15/27 (55%), Gaps = 1/27 (3%) Query: 3 DGDYD-YLIKLLALGDSGVGKTTFLYR 28 D + D +KLL LG GK+T + + Sbjct: 28 DAEKDARTVKLLLLGAGESGKSTIVKQ 54 >2BCJ-Q nrPDB Length = 353 Score = 49.9 bits (118), Expect = 8e-07, Method: Composition-based stats. Identities = 29/186 (15%), Positives = 59/186 (31%), Gaps = 41/186 (22%) Query: 35 NPKFITTVGIDFREKRVVYNAQGPNGSSGKAFKVHLQLWDTAGQERFRSLTTAFFRDAMG 94 +P ++ T RV G V ++ D GQ R F + Sbjct: 163 DPSYLPTQQD---VLRVRVPTTGIIEYPFDLQSVIFRMVDVGGQRSERRKWIHCFENVTS 219 Query: 95 FLLM-----FD-----LTSQQSFLNVRNWMSQLQANAYCENPDIVLIGNKADLPDQR--- 141 + + +D ++ + + + +N ++L NK DL +++ Sbjct: 220 IMFLVALSEYDQVLVESDNENRMEESKALFRTIITYPWFQNSSVILFLNKKDLLEEKIMY 279 Query: 142 -------------EVNERQAREL-----------ADKYGIPYFETSAATGQNVEKAVETL 177 + + + ARE +DK +F T A +N+ + Sbjct: 280 SHLVDYFPEYDGPQRDAQAAREFILKMFVDLNPDSDKIIYSHF-TCATDTENIRFVFAAV 338 Query: 178 LDLIMK 183 D I++ Sbjct: 339 KDTILQ 344 Score = 27.2 bits (59), Expect = 5.7, Method: Composition-based stats. Identities = 9/19 (47%), Positives = 13/19 (68%) Query: 10 IKLLALGDSGVGKTTFLYR 28 +KLL LG GK+TF+ + Sbjct: 34 LKLLLLGTGESGKSTFIKQ 52 >3K53-A nrPDB Length = 271 Score = 49.9 bits (118), Expect = 9e-07, Method: Composition-based stats. Identities = 32/170 (18%), Positives = 64/170 (37%), Gaps = 27/170 (15%) Query: 12 LLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYNAQGPNGSSGKAFKVHLQ 71 + +G+ VGKTT T + + V ++ +E + Y + Sbjct: 6 VALVGNPNVGKTTIFNALTGLRQHVGNWPGVTVEKKEGIMEYREKEFLVVDLPGIYSL-- 63 Query: 72 LWDTAGQERFRSLTTAFFR------DAMGFLLMFDLTS--QQSFLNVRNWMSQLQANAYC 123 TA S+ R +A + + D T + FL + + +++ Sbjct: 64 ---TA-----HSIDELIARNFILDGNADVIVDIVDSTCLMRNLFLTLELFEMEVKN---- 111 Query: 124 ENPDIVLIGNKADLPDQREVNERQARELADKYGIPYFETSAATGQNVEKA 173 I+L+ NK DL ++ +++ + G+P T+A G+ VE+ Sbjct: 112 ----IILVLNKFDLLKKKGAKID-IKKMRKELGVPVIPTNAKKGEGVEEL 156 >2ODE-A nrPDB Length = 350 Score = 49.9 bits (118), Expect = 9e-07, Method: Composition-based stats. Identities = 26/185 (14%), Positives = 49/185 (26%), Gaps = 39/185 (21%) Query: 36 PKFITTVGIDFREKRVVYNAQGPNGSSGKAFKVHLQLWDTAGQERFRSLTTAFFRDAMGF 95 +I T R + G + ++ +++D GQ R F Sbjct: 164 SNYIPTQQDVLRTR---VKTTGIVETHFTFKDLYFKMFDVGGQRSERKKWIHCFEGVTAI 220 Query: 96 LLMFDLTS----------QQSFLNVRNWMSQLQANAYCENPDIVLIGNKADLPDQR---- 141 + L+ + N + I+L NK DL +++ Sbjct: 221 IFCVALSDYDLVLAEDEEMNRMHESMKLFDSICNNKWFTETSIILFLNKKDLFEEKIKRS 280 Query: 142 ----------------------EVNERQARELADKYGIPYFETSAATGQNVEKAVETLLD 179 + D I T A +NV+ + + D Sbjct: 281 PLTICYPEYTGSNTYEEAAAYIQCQFEDLNRRKDTKEIYTHFTCATDTKNVQFVFDAVTD 340 Query: 180 LIMKR 184 +I+K Sbjct: 341 VIIKN 345 Score = 27.6 bits (60), Expect = 4.4, Method: Composition-based stats. Identities = 8/19 (42%), Positives = 12/19 (63%) Query: 10 IKLLALGDSGVGKTTFLYR 28 +KLL LG GK+T + + Sbjct: 33 VKLLLLGAGESGKSTIVKQ 51 >1SHZ-A nrPDB Length = 340 Score = 49.5 bits (117), Expect = 1e-06, Method: Composition-based stats. Identities = 24/166 (14%), Positives = 48/166 (28%), Gaps = 36/166 (21%) Query: 55 AQGPNGSSGKAFKVHLQLWDTAGQERFRSLTTAFFRDAMGFLLMFDLTSQQ--------- 105 +G + + +H +++D GQ R F + L+ Sbjct: 167 TKGIHETHFTFKDLHFKMFDVGGQRSERKKWFECFEGVTAIIFCVALSDYDQVLMEDRQT 226 Query: 106 -SFLNVRNWMSQLQANAYCENPDIVLIGNKADLPDQR----------------------- 141 + N + + I+L NK DL +++ Sbjct: 227 NRMHESMKLFDSICNNKWFTDTSIILFLNKKDLFEEKIKKSPLTICYPEYAGSNTYEEAA 286 Query: 142 ---EVNERQARELADKYGIPYFETSAATGQNVEKAVETLLDLIMKR 184 + + D I T A +NV+ + + D+I+K Sbjct: 287 AYIQCQFEDLNKRKDTKEIYTHFTCATDTKNVQFVFDAVTDVIIKN 332 Score = 30.2 bits (67), Expect = 0.77, Method: Composition-based stats. Identities = 19/70 (27%), Positives = 30/70 (42%), Gaps = 8/70 (11%) Query: 10 IKLLALGDSGVGKTTFL--YRYTDNK-FN----PKFITTVGIDF-REKRVVYNAQGPNGS 61 +KLL LG GK+TFL R + F+ +F T+ + + RV+ +A+ Sbjct: 13 VKLLLLGAGESGKSTFLKQMRIIHGQDFDQRAREEFRPTIYSNVIKGMRVLVDAREKLHI 72 Query: 62 SGKAFKVHLQ 71 K L Sbjct: 73 PWGDNKNQLH 82 >2Q3F-A nrPDB Length = 181 Score = 49.1 bits (116), Expect = 1e-06, Method: Composition-based stats. Identities = 32/190 (16%), Positives = 67/190 (35%), Gaps = 30/190 (15%) Query: 11 KLLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYNAQGPNGSSGKAFKVHL 70 ++L +G GK++ + +K +P T+ + + + V+ Sbjct: 6 RILLMGLRRSGKSSI-QKVVFHKMSPN--ETLF-------LESTNKICREDVSNSSFVNF 55 Query: 71 QLWDTAGQERFRSLT---TAFFRDAMGFLLMFDLTSQQSFLNVRNWMSQL-QANAYCENP 126 Q+WD GQ F T FR + + D + + +A + Sbjct: 56 QIWDFPGQIDFFDPTFDYEMIFRGTGALIFVIDSQD-DYMEALARLHLTVTRAYKVNTDI 114 Query: 127 DIVLIGNKAD-------LPDQREVNERQARELAD----KYGIPYFETSAATGQNVEKAVE 175 + + +K D + QR++++R +LAD K + ++ TS E Sbjct: 115 NFEVFIHKVDGLSDDHKIETQRDIHQRANDDLADAGLEKIHLSFYLTSIYDH----SIFE 170 Query: 176 TLLDLIMKRM 185 ++ K + Sbjct: 171 AFSKVVQKLI 180 >5YT0-A nrPDB Length = 364 Score = 49.1 bits (116), Expect = 2e-06, Method: Composition-based stats. Identities = 34/183 (18%), Positives = 57/183 (31%), Gaps = 21/183 (11%) Query: 12 LLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYNA-QGPNGSSGKAFKVHL 70 ++ LG GKTT L + K + V + + K V L Sbjct: 19 VVVLGHVDHGKTTLLDKIRRTAVAAKEAGGITQHIGASIVPADVIEKIAEPLKKVIPVKL 78 Query: 71 QL-----WDTAGQERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVRNWMSQLQANAYCEN 125 + DT G E F +L A +L+ D+ + F +L Sbjct: 79 VIPGLLFIDTPGHELFSNLRRRGGSVADFAILVVDI--MEGFKPQTYEALELLKERR--- 133 Query: 126 PDIVLIGNKADLPDQREVNERQARELADKYGIPYFETSAATGQNVEKAVETLLDLIMKRM 185 ++ NK D + N P+ ET V + +E + I+ +M Sbjct: 134 VPFLIAANKIDRIPGWKPNP----------DAPFIETIRRQDPKVREILEQRVYEIVGKM 183 Query: 186 EQC 188 + Sbjct: 184 YEA 186 >2DYK-A nrPDB Length = 161 Score = 48.7 bits (115), Expect = 2e-06, Method: Composition-based stats. Identities = 27/183 (14%), Positives = 57/183 (31%), Gaps = 41/183 (22%) Query: 9 LIKLLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYNAQGPNGSSGKAFKV 68 + K++ +G VGK++ R + + G+ K V Sbjct: 1 MHKVVIVGRPNVGKSSLFNRLLKKR-SAVVADVPGVTRDLKEGVVETDRG---------- 49 Query: 69 HLQLWDTAG-----------QERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVRNWMSQL 117 L DT G QE+ +++F + + +++ Sbjct: 50 RFLLVDTGGLWSGDKWEKKIQEKVDRALE------DAEVVLFAVDGRAELTQADYEVAEY 103 Query: 118 QANAYCENPDIVLIGNKADLPDQREVNERQARELADKYGIPY---FETSAATGQNVEKAV 174 ++L+ K D P + L YG+ + TS+ + +E+ + Sbjct: 104 LRRKGK---PVILVATKVDDP-------KHELYLGPLYGLGFGDPIPTSSEHARGLEELL 153 Query: 175 ETL 177 E + Sbjct: 154 EAI 156 >3GEE-A nrPDB Length = 476 Score = 48.7 bits (115), Expect = 2e-06, Method: Composition-based stats. Identities = 32/179 (17%), Positives = 64/179 (35%), Gaps = 27/179 (15%) Query: 13 LALGDSGVGKTTFLYRYT-DNKFNPKFITTVGIDFREKRVVYNAQGPNGSSGKAFKVHLQ 71 + G GK+T L + + D+ E+ +++ K + Sbjct: 237 VIAGKPNAGKSTLLNTLLGQERAIVSHMPGTTRDYIEECFIHD------------KTMFR 284 Query: 72 LWDTAGQ----ERFRS--LTTAFFRDAMGFLLMFDLTSQQSFLNVRNWMSQLQA-NAYCE 124 L DTAG E + + + A L+++ L + + + +++++ A Sbjct: 285 LTDTAGLREAGEEIEHEGIRRSRMKMAEADLILY-LLDLGT-ERLDDELTEIRELKAAHP 342 Query: 125 NPDIVLIGNKADLPDQREVNERQ-ARELADKYGIPYFETSAATGQNVEKAVETLLDLIM 182 + + NK D R N R +AD G SA G ++ + + DL+ Sbjct: 343 AAKFLTVANKLD----RAANADALIRAIADGTGTEVIGISALNGDGIDTLKQHMGDLVK 397 >5KUT-A nrPDB Length = 189 Score = 48.7 bits (115), Expect = 2e-06, Method: Composition-based stats. Identities = 31/158 (19%), Positives = 52/158 (32%), Gaps = 42/158 (26%) Query: 14 ALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYNAQGPNGSSGKAFKVHLQLW 73 +G GVGK+ FL + + + V N Sbjct: 14 VVGACGVGKSAFLQAFLGRGLGHQDTREQPPGYAIDTVQVN------------------- 54 Query: 74 DTAGQERFRSLTTAFFRDAMGFL------------LMFDLTSQQSFLNVRNWMSQLQANA 121 GQE++ L G L LMFD + +SF + + + + Sbjct: 55 ---GQEKYLILCEV---GTDGLLATSLDATCDVACLMFDGSDPKSFAHCAS----VYKHH 104 Query: 122 YCE-NPDIVLIGNKADLPDQREVNERQARELADKYGIP 158 Y + + + +KADLP+ V+ E K+ +P Sbjct: 105 YMDGQTPCLFVSSKADLPEGVAVSGPSPAEFCRKHRLP 142 >5ZZM-A nrPDB Length = 426 Score = 48.7 bits (115), Expect = 2e-06, Method: Composition-based stats. Identities = 37/193 (19%), Positives = 65/193 (33%), Gaps = 42/193 (21%) Query: 12 LLALGDSGVGKTTFLYR------YTDNKFNPKFITT--------VGIDFREKRVVYNAQG 57 + +G + GK+T R Y ++ T VG V + Sbjct: 200 VSLVGYTNAGKSTLFNRITEARVYAADQLFATLDPTLRRIDVADVGETVLADTVGFIRHL 259 Query: 58 PNGSSGKAFKVHLQLWDTAGQERFRSLTTAFFRDAMGFLLMFDLTS---QQSFLNVRNWM 114 P+ AFK L QE R A L + D Q++ V + Sbjct: 260 PHDLVA-AFKATL-------QET---------RQATLLLHVIDAADVRVQENIEAVNTVL 302 Query: 115 SQLQANAYCENPDIVLIGNKADLPDQREVNERQARELADKYGIPYFETSAATGQNVEKAV 174 ++ A+ +L+ NK D+ + E + E +K + SA TG + + Sbjct: 303 EEIDAHE----IPTLLVMNKIDMLEDFEPRIDRDEE--NKPNRVWL--SAQTGAGIPQLF 354 Query: 175 ETLLDLIMKRMEQ 187 + L + + + Q Sbjct: 355 QALTERLSGEVAQ 367 >5FG3-A nrPDB Length = 623 Score = 48.7 bits (115), Expect = 2e-06, Method: Composition-based stats. Identities = 34/183 (18%), Positives = 57/183 (31%), Gaps = 21/183 (11%) Query: 12 LLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYNA-QGPNGSSGKAFKVHL 70 ++ LG GKTT L + K + V + + K V L Sbjct: 19 VVVLGHVDHGKTTLLDKIRRTAVAAKEAGGITQHIGASIVPADVIEKIAEPLKKVIPVKL 78 Query: 71 QL-----WDTAGQERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVRNWMSQLQANAYCEN 125 + DT G E F +L A +L+ D+ + F +L Sbjct: 79 VIPGLLFIDTPGHELFSNLRRRGGSVADFAILVVDI--MEGFKPQTYEALELLKERR--- 133 Query: 126 PDIVLIGNKADLPDQREVNERQARELADKYGIPYFETSAATGQNVEKAVETLLDLIMKRM 185 ++ NK D + N P+ ET V + +E + I+ +M Sbjct: 134 VPFLIAANKIDRIPGWKPNP----------DAPFIETIRRQDPKVREILEQRVYEIVGKM 183 Query: 186 EQC 188 + Sbjct: 184 YEA 186 >1WF3-A nrPDB Length = 301 Score = 48.7 bits (115), Expect = 2e-06, Method: Composition-based stats. Identities = 45/238 (18%), Positives = 78/238 (32%), Gaps = 63/238 (26%) Query: 1 MTDGDYDYLIKLLALGDSGVGKTTFLYRYTDNK---FNPKFITT------VGIDFREKRV 51 M + Y + +G VGK+T L K +P+ TT + + R + V Sbjct: 1 MAEKTYSGF--VAIVGKPNVGKSTLLNNLLGVKVAPISPRPQTTRKRLRGILTEGRRQIV 58 Query: 52 VYNAQGPNGSSGKAFKVHLQLWDTAGQERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVR 111 + G + + D QE + +L D + + DL + + Sbjct: 59 FVDTPGLHKPMDALGE----FMD---QEVYEALA-----DVNAVVWVVDLRHPPTPED-- 104 Query: 112 NWMSQLQANAYCE---NPDIVLIGNKADLP-------------------------DQREV 143 +L A A I+L+GNK D D+R+V Sbjct: 105 ----ELVARALKPLVGKVPILLVGNKLDAAKYPEEAMKAYHELLPEAEPRMLSALDERQV 160 Query: 144 NERQARELADKYGIPYF--ETSAATGQNVEKAVETLLDLIMKRMEQCVEKTQIPDTVN 199 E +A LA P+F E A + ++ + I++ ++P V Sbjct: 161 AELKADLLALMPEGPFFYPEDYAKS----DQTFGEWVAEILREEAMKRLWHEVPYAVA 214 >5VAI-A nrPDB Length = 380 Score = 48.7 bits (115), Expect = 2e-06, Method: Composition-based stats. Identities = 17/100 (17%), Positives = 31/100 (31%), Gaps = 10/100 (10%) Query: 53 YNAQGPNGSSGKAFKVHLQLWDTAGQERFRSLTTAFFRDAMGFLLMFDLTS--------- 103 G + + KV+ ++D GQ R F D + + +S Sbjct: 188 VLTSGIFETKFQVDKVNFHMFDVGGQRDERRKWIQCFNDVTAIIFVVASSSYNMVIREDN 247 Query: 104 -QQSFLNVRNWMSQLQANAYCENPDIVLIGNKADLPDQRE 142 N + N + ++L NK DL ++ Sbjct: 248 QTNRLQEALNLFKSIWNNRWLRTISVILFLNKQDLLAEKV 287 Score = 27.2 bits (59), Expect = 5.6, Method: Composition-based stats. Identities = 8/23 (34%), Positives = 12/23 (52%) Query: 6 YDYLIKLLALGDSGVGKTTFLYR 28 Y +LL LG GK+T + + Sbjct: 37 YRATHRLLLLGAGESGKSTIVKQ 59 >6OIJ-A nrPDB Length = 353 Score = 48.4 bits (114), Expect = 2e-06, Method: Composition-based stats. Identities = 26/171 (15%), Positives = 53/171 (30%), Gaps = 38/171 (22%) Query: 50 RVVYNAQGPNGSSGKAFKVHLQLWDTAGQERFRSLTTAFFRDAMGFLLM-----FD---- 100 RV G + ++ D GQ R F + + + +D Sbjct: 175 RVRVPTTGIIEYPFDLENIIFRMVDVGGQRSERRKWIHCFENVTSIMFLVALSEYDQVLV 234 Query: 101 -LTSQQSFLNVRNWMSQLQANAYCENPDIVLIGNKADLPDQR----------------EV 143 ++ + + + +N ++L NK DL + + + Sbjct: 235 ESDNENRMEESKALFRTIITYPWFQNSSVILFLNKKDLLEDKILYSHLVDYFPEFDGPQR 294 Query: 144 NERQAREL-----------ADKYGIPYFETSAATGQNVEKAVETLLDLIMK 183 + + ARE +DK +F T A +N+ + D I++ Sbjct: 295 DAQAAREFILKMFVDLNPDSDKIIYSHF-TCATDTENIRFVFAAVKDTILQ 344 Score = 27.2 bits (59), Expect = 5.9, Method: Composition-based stats. Identities = 9/19 (47%), Positives = 13/19 (68%) Query: 10 IKLLALGDSGVGKTTFLYR 28 +KLL LG GK+TF+ + Sbjct: 34 LKLLLLGTGESGKSTFIKQ 52 >5DN8-A nrPDB Length = 446 Score = 47.6 bits (112), Expect = 4e-06, Method: Composition-based stats. Identities = 37/187 (19%), Positives = 61/187 (32%), Gaps = 40/187 (21%) Query: 10 IKLLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYNAQGPNGSSGKAFKVH 69 IK+ +G VGK+T + R E+ +VY+ G S Sbjct: 179 IKIAMIGRPNVGKSTLINRLLG---------------EERVIVYDQPGTTRDSIYIPFAR 223 Query: 70 ----LQLWDTAG-------Q---ERFRSLTTAF-FRDAMGFLLMFDLTSQQSFLNVRNWM 114 L DTAG Q E+F + + A + + D + ++R Sbjct: 224 NDENYTLIDTAGIRRRAKIQDYVEKFSMIKSLQAMHAADVVIFLLDARQGVTEQDLR--- 280 Query: 115 SQLQANAYCENPDIVLIGNKAD---LPDQREVNERQAREL-ADKYGIPYFETSAATGQNV 170 L +++ NK D + ++ V R + + YF SA G V Sbjct: 281 --LLNRIVEAGVSLIIAVNKWDGLNIEERDNVRNAIDRRMPFVDFARRYF-ISALHGTGV 337 Query: 171 EKAVETL 177 K + Sbjct: 338 GKLFRAI 344 Score = 29.5 bits (65), Expect = 1.2, Method: Composition-based stats. Identities = 33/177 (18%), Positives = 57/177 (32%), Gaps = 29/177 (16%) Query: 12 LLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYNAQGPNGSSGKAFKVHLQ 71 + +G VGK+T T ++ + D V + Q + L Sbjct: 8 IAIVGRPNVGKSTLFNYLTKSR------AALVADV--PGVTRDRQYGETTIDSQ---RLL 56 Query: 72 LWDTAGQ-----ERFRSLTTAFFRDA----MGFLLMFDLTSQQSFLNVRNWMSQLQANAY 122 L DT G + L A L + D + + +++ Sbjct: 57 LVDTGGLVDTENKEVAPLAETQVEQAIDESDCILFLVDA--KAGLVPADEIIAERLRKKG 114 Query: 123 CENPDIVLIGNKADLPDQREVNERQARELADKYGIPYFETSAATGQNVEKAVETLLD 179 + I L NKAD V +G PY +AA+G+ V+ + +L+ Sbjct: 115 KK---IFLAVNKADRARAAVVQSDF---YKLGFGEPYV-IAAASGRGVKDLMTQVLE 164 >5LAD-A nrPDB Length = 404 Score = 47.2 bits (111), Expect = 5e-06, Method: Composition-based stats. Identities = 35/199 (17%), Positives = 63/199 (31%), Gaps = 32/199 (16%) Query: 12 LLALGDSGVGKTTFLYRYTDN--KFNPKFITTVGIDFREKRVVYNAQGPNGSSGKAFKVH 69 ++ G VGK++F+ ++ T + +Y Sbjct: 12 IVVAGRRNVGKSSFMNALVGQNVSIVSEYAGTTTDPVYKSMELYPVGPVTLVDTPGLD-- 69 Query: 70 LQLWDTAGQERFR--SLTTAFFRDAMGFLLMFDLTSQQSFLNVRNWMSQLQANAYCENPD 127 D R R F+R A +L+ D +V N +++ Sbjct: 70 ----DVGELGRLRVEKARRVFYR-ADCGILVTDSEPTPYEDDVVNLFKEME-------IP 117 Query: 128 IVLIGNKADLPDQREVNERQARELADKYGIPY----FETSAATGQNVEKAVETLLDLIMK 183 V++ NK D V +A EL Y Y SA +K + + I + Sbjct: 118 FVVVVNKID------VLGEKAEELKGLYESRYEAKVLLVSALQ----KKGFDDIGKTISE 167 Query: 184 RMEQCVEKTQIPDTVNGGN 202 + E + D ++GG+ Sbjct: 168 ILPGDEEIPYLGDLIDGGD 186 >5X4B-A nrPDB Length = 162 Score = 47.2 bits (111), Expect = 6e-06, Method: Composition-based stats. Identities = 24/138 (17%), Positives = 45/138 (32%), Gaps = 24/138 (17%) Query: 12 LLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYNAQGPNGSSGKAFKVHLQ 71 + +G VGK+T R + + T G+ + SS + Sbjct: 5 VAIVGRPNVGKSTIFNRIAGERIS-IVEDTPGVT----------RDRIYSSAEWLNYDFN 53 Query: 72 LWDTAGQE--------RFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVRNWMSQLQANAYC 123 L DT G + + R +A + M + ++ ++++ Y Sbjct: 54 LIDTGGIDIGDEPFLAQIRQQAEIAMDEADVIIFM--VNGREGVTAADEEVAKIL---YR 108 Query: 124 ENPDIVLIGNKADLPDQR 141 +VL NK D + R Sbjct: 109 TKKPVVLAVNKLDNTEMR 126 >4DCU-A nrPDB Length = 456 Score = 46.8 bits (110), Expect = 6e-06, Method: Composition-based stats. Identities = 24/138 (17%), Positives = 45/138 (32%), Gaps = 24/138 (17%) Query: 12 LLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYNAQGPNGSSGKAFKVHLQ 71 + +G VGK+T R + + T G+ + SS + Sbjct: 26 VAIVGRPNVGKSTIFNRIAGERIS-IVEDTPGVT----------RDRIYSSAEWLNYDFN 74 Query: 72 LWDTAGQE--------RFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVRNWMSQLQANAYC 123 L DT G + + R +A + M + ++ ++++ Y Sbjct: 75 LIDTGGIDIGDEPFLAQIRQQAEIAMDEADVIIFM--VNGREGVTAADEEVAKIL---YR 129 Query: 124 ENPDIVLIGNKADLPDQR 141 +VL NK D + R Sbjct: 130 TKKPVVLAVNKLDNTEMR 147 Score = 35.6 bits (81), Expect = 0.018, Method: Composition-based stats. Identities = 31/190 (16%), Positives = 63/190 (33%), Gaps = 34/190 (17%) Query: 9 LIKLLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYNAQGPNGSSGKAFKV 68 +I+ +G VGK++ + + V + +S + Sbjct: 195 VIQFCLIGRPNVGKSSLVNAMLGEE-----------RVIVSNVAGTTRDAVDTSFTYNQQ 243 Query: 69 HLQLWDTAG----------QERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVRNWMSQLQ 118 + DTAG E++ L D + + + + + ++ Sbjct: 244 EFVIVDTAGMRKKGKVYETTEKYSVLRALKAIDRSEVVAV--VLDGE--EGIIEQDKRIA 299 Query: 119 ANAYCENPDIVLIGNKADLPDQREVNERQARELADKY-----GIPYFETSAATGQNVEKA 173 A+ +V++ NK D D+ E ++ E + P SA T +K Sbjct: 300 GYAHEAGKAVVIVVNKWDAVDKDESTMKEFEENIRDHFQFLDYAPILFMSALT----KKR 355 Query: 174 VETLLDLIMK 183 + TL+ I+K Sbjct: 356 IHTLMPAIIK 365 >3A1W-A nrPDB Length = 168 Score = 46.8 bits (110), Expect = 6e-06, Method: Composition-based stats. Identities = 35/186 (18%), Positives = 68/186 (36%), Gaps = 30/186 (16%) Query: 8 YLIKLLALGDSGVGKTTFLYRYTDNKFNPKFITT-VGIDFREKRVVYNAQGPNGSSGKAF 66 +++K+ G VGKT+ T K +++ G+ +K V+ +G Sbjct: 4 HMVKVALAGCPNVGKTSLFNALTGTK---QYVANWPGVTVEKKEGVFTYKGY-------- 52 Query: 67 KVHLQLWDTAG--QERFRSLTTAFFR------DAMGFLLMFDLTSQQSFLNVRNWMSQLQ 118 + L D G + S+ R DA +L+ D + + ++ Sbjct: 53 --TINLIDLPGTYSLGYSSIDEKIARDYLLKGDADLVILVADSVNP---EQSLYLLLEIL 107 Query: 119 ANAYCENPDIVLIGNKADLPDQREVNERQARELADKYGIPYFETSAATGQNVEKAVETLL 178 ++L D + + + EL GIP TS+ TG+ +E+ E ++ Sbjct: 108 EMEKK----VILAMTAIDEAKKTGMKIDR-YELQKHLGIPVVFTSSVTGEGLEELKEKIV 162 Query: 179 DLIMKR 184 + K Sbjct: 163 EYAQKN 168 >3A1U-A nrPDB Length = 258 Score = 46.4 bits (109), Expect = 9e-06, Method: Composition-based stats. Identities = 35/186 (18%), Positives = 68/186 (36%), Gaps = 30/186 (16%) Query: 8 YLIKLLALGDSGVGKTTFLYRYTDNKFNPKFITT-VGIDFREKRVVYNAQGPNGSSGKAF 66 +++K+ G VGKT+ T K +++ G+ +K V+ +G Sbjct: 4 HMVKVALAGCPNVGKTSLFNALTGTK---QYVANWPGVTVEKKEGVFTYKGY-------- 52 Query: 67 KVHLQLWDTAG--QERFRSLTTAFFR------DAMGFLLMFDLTSQQSFLNVRNWMSQLQ 118 + L D G + S+ R DA +L+ D + + ++ Sbjct: 53 --TINLIDLPGTYSLGYSSIDEKIARDYLLKGDADLVILVADSVNP---EQSLYLLLEIL 107 Query: 119 ANAYCENPDIVLIGNKADLPDQREVNERQARELADKYGIPYFETSAATGQNVEKAVETLL 178 ++L D + + + EL GIP TS+ TG+ +E+ E ++ Sbjct: 108 EMEKK----VILAMTAIDEAKKTGMKIDR-YELQKHLGIPVVFTSSVTGEGLEELKEKIV 162 Query: 179 DLIMKR 184 + K Sbjct: 163 EYAQKN 168 >3PR1-A nrPDB Length = 195 Score = 46.4 bits (109), Expect = 9e-06, Method: Composition-based stats. Identities = 46/194 (23%), Positives = 76/194 (39%), Gaps = 23/194 (11%) Query: 2 TDGDYDYLIK--LLALGDSGVGKTTFLYRYTDNKFNPKFIT---TVGIDFR-EKRVVYNA 55 T GDY +K + +G S VGK++ L + K T T I+F Y Sbjct: 14 TPGDYPPPLKGEVAFVGRSNVGKSSLLNALFNRKIAFVSKTPGKTRSINFYLVNSKYYFV 73 Query: 56 QGPNGSSGKAFKVHLQLWDTAGQERFRSLTTAFFRDAMGFLLMFD--LTSQQSFLNVRNW 113 P K K LW ++ F++ + FLL+ D + Q S L + W Sbjct: 74 DLPGYGYAKVSKKERMLWKRLVEDYFKNRWSLQM----VFLLV-DGRIPPQDSDLMMVEW 128 Query: 114 MSQLQANAYCENPDIVLIGNKADLPD--QREVNERQARELADKYG-IPYFETSAATGQNV 170 M L N ++ K D +R + R++ KYG TS+ TG+ + Sbjct: 129 MKSL-------NIPFTIVLTKMDKVKMSERAKKLEEHRKVFSKYGEYTIIPTSSVTGEGI 181 Query: 171 EKAVETLLDLIMKR 184 + ++ + L+ + Sbjct: 182 SELLDLISTLLKEN 195 >3LLU-A nrPDB Length = 196 Score = 46.0 bits (108), Expect = 1e-05, Method: Composition-based stats. Identities = 33/190 (17%), Positives = 69/190 (36%), Gaps = 30/190 (15%) Query: 11 KLLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYNAQGPNGSSGKAFKVHL 70 ++L +G GK++ + +K +P T+ ++ K + + V+ Sbjct: 22 RILLMGLRRSGKSSI-QKVVFHKMSPN--ETLFLESTNKIYKDD-------ISNSSFVNF 71 Query: 71 QLWDTAGQERFRSLT---TAFFRDAMGFLLMFDLTSQQSFLNVRNWMSQL-QANAYCENP 126 Q+WD GQ F T FR + + D + + +A + Sbjct: 72 QIWDFPGQMDFFDPTFDYEMIFRGTGALIYVIDAQD-DYMEALTRLHITVSKAYKVNPDM 130 Query: 127 DIVLIGNKAD-------LPDQREVNERQARELAD----KYGIPYFETSAATGQNVEKAVE 175 + + +K D + QR++++R +LAD K + ++ TS E Sbjct: 131 NFEVFIHKVDGLSDDHKIETQRDIHQRANDDLADAGLEKLHLSFYLTSIYDH----SIFE 186 Query: 176 TLLDLIMKRM 185 ++ K + Sbjct: 187 AFSKVVQKLI 196 >6D9H-A nrPDB Length = 355 Score = 46.0 bits (108), Expect = 1e-05, Method: Composition-based stats. Identities = 26/185 (14%), Positives = 51/185 (27%), Gaps = 39/185 (21%) Query: 36 PKFITTVGIDFREKRVVYNAQGPNGSSGKAFKVHLQLWDTAGQERFRSLTTAFFRDAMGF 95 +I T R + G + +H +++D Q R F Sbjct: 166 SDYIPTQQDVLRTR---VKTTGIVETHFTFKDLHFKMFDVGAQRSERKKWIHCFEGVTAI 222 Query: 96 LLM-----FDLT-----SQQSFLNVRNWMSQLQANAYCENPDIVLIGNKADLPDQR---- 141 + +DL + N + + I+L NK DL +++ Sbjct: 223 IFCVALSAYDLVLAEDEEMNRMHASMKLFDSICNNKWFTDTSIILFLNKKDLFEEKITHS 282 Query: 142 ----------------------EVNERQARELADKYGIPYFETSAATGQNVEKAVETLLD 179 + + D I T + +NV+ + + D Sbjct: 283 PLTICFPEYTGANKYDEAASYIQSKFEDLNKRKDTKEIYTHFTCSTDTKNVQFVFDAVTD 342 Query: 180 LIMKR 184 +I+K Sbjct: 343 VIIKN 347 >6CES-C nrPDB Length = 399 Score = 46.0 bits (108), Expect = 1e-05, Method: Composition-based stats. Identities = 34/192 (17%), Positives = 69/192 (35%), Gaps = 30/192 (15%) Query: 11 KLLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYNAQGPNGSSGKAFKVHL 70 ++L +G GK + + +K +P T+ ++ K + + V+ Sbjct: 63 RILLMGLRRSGKNSI-QKVVFHKMSPN--ETLFLESTNKIYKDD-------ISNSSFVNF 112 Query: 71 QLWDTAGQERFRSLT---TAFFRDAMGFLLMFDLTSQQSFLNVRNWMSQL-QANAYCENP 126 Q+WD GQ F T FR + + D + + +A + Sbjct: 113 QIWDFPGQMDFFDPTFDYEMIFRGTGALIYVIDAQD-DYMEALTRLHITVSKAYKVNPDM 171 Query: 127 DIVLIGNKAD-------LPDQREVNERQARELAD----KYGIPYFETSAATGQNVEKAVE 175 + + +K D + QR++++R +LAD K + ++ TS E Sbjct: 172 NFEVFIHKVDGLSDDHKIETQRDIHQRANDDLADAGLEKLHLSFYLTSIYDH----SIFE 227 Query: 176 TLLDLIMKRMEQ 187 ++ K + Q Sbjct: 228 AFSKVVQKLIPQ 239 >5KSO-A nrPDB Length = 190 Score = 46.0 bits (108), Expect = 1e-05, Method: Composition-based stats. Identities = 22/158 (13%), Positives = 52/158 (32%), Gaps = 31/158 (19%) Query: 9 LIKLLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYNAQGPNGSSGKAFKV 68 + + +G GK+ L R+K++ + + + Sbjct: 8 VFRCNVIGVKNCGKSGVLQALLGRNL-----------MRQKKIREDHKSYYAINTVYVY- 55 Query: 69 HLQLWDTAGQERFRSLTTA----FFRDA----MGFLLMFDLTSQQSFLNVRNWMSQLQAN 120 GQE++ L F +A L++D+++ +SF Q + Sbjct: 56 --------GQEKYLLLHDISESEFLTEAEIICDVVCLVYDVSNPKSFEYCARIFKQ---H 104 Query: 121 AYCENPDIVLIGNKADLPDQREVNERQARELADKYGIP 158 +++ K+DL + ++ + K+ +P Sbjct: 105 FMDSRIPCLIVAAKSDLHEVKQEYSISPTDFCRKHKMP 142 >3IEU-A nrPDB Length = 301 Score = 45.7 bits (107), Expect = 1e-05, Method: Composition-based stats. Identities = 32/193 (16%), Positives = 61/193 (31%), Gaps = 37/193 (19%) Query: 12 LLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYNAQGPNGSSGKAFKVHLQ 71 + +G VGK+T L + K + + R + V + +G + Sbjct: 11 IAIVGRPNVGKSTLLNKLLGQKIS--ITSRKAQTTRHRIVGIHTEGAYQAIYV------- 61 Query: 72 LWDTAGQ--ERFRSLTTA-------FFRDAMGFLLMFDLTSQQSFLNVRNWMSQ---LQA 119 DT G E R++ D + + + T W + Sbjct: 62 --DTPGLHMEEKRAINRLMNKAASSSIGDVELVIFVVEGT---------RWTPDDEMVLN 110 Query: 120 NAYCENPDIVLIGNKADLPDQREVNERQARELADKYG-IPYFETSAATGQNVEKAVETLL 178 ++L NK D ++ + LA + + SA TG NV+ T+ Sbjct: 111 KLREGKAPVILAVNKVDNVQEKADLLPHLQFLASQMNFLDIVPISAETGLNVD----TIA 166 Query: 179 DLIMKRMEQCVEK 191 ++ K + + Sbjct: 167 AIVRKHLPEATHH 179 >6GB2-BC nrPDB Length = 657 Score = 45.7 bits (107), Expect = 1e-05, Method: Composition-based stats. Identities = 33/187 (17%), Positives = 60/187 (32%), Gaps = 28/187 (14%) Query: 21 GKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYNAQGPNGSSGKAFKVHLQLWDTAGQER 80 GKTT L +KF + V + + S K+ DT G Sbjct: 122 GKTTLL-----DKFRKTQVAAVETG----GITQHIGAFLVSLPSGEKITF--LDTPGHAA 170 Query: 81 FRSLTTAFFRDAMGFLLMFDLTS---QQSFLNVRNWMSQLQANAYCENPDIVLIGNKADL 137 F ++ + +L+ +Q+ +++ +A I+L NK D Sbjct: 171 FSAMRARGAQVTDIVVLVVAADDGVMKQTVESIQ--------HAKDAQVPIILAVNKCDK 222 Query: 138 PDQREVNERQARE----LADKYG--IPYFETSAATGQNVEKAVETLLDLIMKRMEQCVEK 191 + ++ + + YG + SA TG N+ E + L + Sbjct: 223 AEADPEKVKKELLAYDVVCEDYGGDVQAVPVSALTGDNLMALAEATVALAEMLELKADPN 282 Query: 192 TQIPDTV 198 + TV Sbjct: 283 GPVEGTV 289 >3J8G-X nrPDB Length = 490 Score = 45.7 bits (107), Expect = 2e-05, Method: Composition-based stats. Identities = 34/177 (19%), Positives = 59/177 (33%), Gaps = 14/177 (7%) Query: 10 IKLLALGDSGVGKTTFLYRYTDNKFNPKFI-TTVGIDFREKRVVYNAQGPNGSSGKAFKV 68 IKL +G VGK+T R + + D + + + + Sbjct: 203 IKLAIVGRPNVGKSTLTNRILGEERVVVYDMPGTTRDSIYIPMERDGREYVLIDTAGVRK 262 Query: 69 HLQLWDTAGQERFRSLTTAF-FRDAMGFLLMFDLTSQQSFLNVRNWMSQLQANAYCENPD 127 ++ D E+F + T DA +L+ D S ++ L Sbjct: 263 RGKITDAV--EKFSVIKTLQAIEDANVVMLVIDAREGISDQDLS-----LLGFILNSGRS 315 Query: 128 IVLIGNKADLPDQREVNERQARELADKYGI----PYFETSAATGQNVEKAVETLLDL 180 +V++ NK D +EV E+ L + G SA G V E++ + Sbjct: 316 LVIVVNKWD-GLSQEVKEQVKETLDFRLGFIDFARVHFISALHGSGVGNLFESVREA 371 Score = 33.7 bits (76), Expect = 0.056, Method: Composition-based stats. Identities = 23/141 (16%), Positives = 39/141 (27%), Gaps = 25/141 (17%) Query: 12 LLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYNAQGPNGSSGKAFKVHLQ 71 + +G VGK+T R T + + DF + + Sbjct: 5 VALVGRPNVGKSTLFNRLTRTR------DALVADFPGLTRDRKYGRAEIEGREFICI--- 55 Query: 72 LWDTAGQE--------RFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVRNWMSQLQANAYC 123 DT G + R + +A L M D + + + + Sbjct: 56 --DTGGIDGTEDGVETRMAEQSLLAIEEADVVLFMVDA--RAGLMPADE---AIAKHLRS 108 Query: 124 ENPDIVLIGNKAD-LPDQREV 143 L+ NK D L + V Sbjct: 109 REKPTFLVANKTDGLDPDQAV 129 >5KU1-A nrPDB Length = 424 Score = 45.7 bits (107), Expect = 2e-05, Method: Composition-based stats. Identities = 22/158 (13%), Positives = 52/158 (32%), Gaps = 31/158 (19%) Query: 9 LIKLLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYNAQGPNGSSGKAFKV 68 + + +G GK+ L R+K++ + + + Sbjct: 242 VFRCNVIGVKNCGKSGVLQALLGRNL-----------MRQKKIREDHKSYYAINTVYVY- 289 Query: 69 HLQLWDTAGQERFRSLTTA----FFRDA----MGFLLMFDLTSQQSFLNVRNWMSQLQAN 120 GQE++ L F +A L++D+++ +SF Q + Sbjct: 290 --------GQEKYLLLHDISESEFLTEAEIICDVVCLVYDVSNPKSFEYCARIFKQ---H 338 Query: 121 AYCENPDIVLIGNKADLPDQREVNERQARELADKYGIP 158 +++ K+DL + ++ + K+ +P Sbjct: 339 FMDSRIPCLIVAAKSDLHEVKQEYSISPTDFCRKHKMP 376 >2YWH-A nrPDB Length = 600 Score = 45.7 bits (107), Expect = 2e-05, Method: Composition-based stats. Identities = 36/174 (20%), Positives = 66/174 (37%), Gaps = 22/174 (12%) Query: 21 GKTTFLYRY-------TDNKFNPKFITTVGIDFREKRVVYNAQGPNG--SSGKAFKVHLQ 71 GK+T R ++ + + + T+ ++ RE+ + Q + L Sbjct: 18 GKSTLADRLLEYTGAISEREKREQLLDTLDVE-RERGITVKMQAVRMFYKAKDGNTYKLH 76 Query: 72 LWDTAGQERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVRNWMSQLQANAYCENPDIVLI 131 L DT G F + G LL+ D + V N+ A ++ I+ + Sbjct: 77 LIDTPGHVDFSYEVSRALAACEGALLLIDASQGIEAQTVANFWK-----AVEQDLVIIPV 131 Query: 132 GNKADLP----DQREVNERQARELADKYGIPYFETSAATGQNVEKAVETLLDLI 181 NK DLP D+ + + L + I SA G +E+ +E +++ I Sbjct: 132 INKIDLPSADVDRVKKQIEEVLGLDPEEAIL---ASAKEGIGIEEILEAIVNRI 182 >4FID-A nrPDB Length = 340 Score = 44.1 bits (103), Expect = 4e-05, Method: Composition-based stats. Identities = 28/202 (13%), Positives = 54/202 (26%), Gaps = 55/202 (27%) Query: 36 PKFITTVGIDFREKRVVYNAQGPNGSSGKAFKVHLQLWDTAGQERFRSLTTAFFRDAMGF 95 ++ T + G + + L D GQ R +FF D Sbjct: 132 EDYVPTEEDLIHNRT---KTTGIHEYDFVVKDIPFHLIDVGGQRSERKKWVSFFSDVDCA 188 Query: 96 LLMFDLT----------SQQSFLNVRNWMSQLQANAYCENPDIVLIGNKADLPDQR--EV 143 + + L + + N + + ++ NK DL +++ +V Sbjct: 189 IFVTSLAEYDMKLYEDGNTSRLTESIAVFKDIMTNEFLKGAVKLIFLNKMDLFEEKLTKV 248 Query: 144 NER-------------QARELADKY----------------GIPYFE-----------TS 163 + + G E T+ Sbjct: 249 PLNTIFPEYTGGDNAVMGAQYIQQLFTGKLQTEEMNISGADGTANIEGAVNEKVYTNPTN 308 Query: 164 AATGQNVEKAVETLLDLIMKRM 185 A G N+++ +D+IMK M Sbjct: 309 ATDGSNIKRVFMLAVDVIMKNM 330 Score = 28.3 bits (62), Expect = 2.8, Method: Composition-based stats. Identities = 7/33 (21%), Positives = 12/33 (36%), Gaps = 3/33 (9%) Query: 12 LLALGDSGVGKTTFLYRYT---DNKFNPKFITT 41 ++ LG GK+T + F + T Sbjct: 8 VMLLGSGESGKSTIAKQLKILFGGGFPEQERAT 40 >1TAG-A nrPDB Length = 324 Score = 43.3 bits (101), Expect = 9e-05, Method: Composition-based stats. Identities = 28/184 (15%), Positives = 56/184 (30%), Gaps = 39/184 (21%) Query: 36 PKFITTVGIDFREKRVVYNAQGPNGSSGKAFKVHLQLWDTAGQERFRSLTTAFFRDAMGF 95 P ++ T R + G + ++ +++D GQ R F Sbjct: 135 PGYVPTEQDVLRSR---VKTTGIIETQFSFKDLNFRMFDVGGQRSERKKWIHCFEGVTCI 191 Query: 96 LLM-----FD---LTSQQ--SFLNVRNWMSQLQANAYCENPDIVLIGNKADLPDQR---- 141 + + +D + + + + + + Y IVL NK D+ ++ Sbjct: 192 IFIAALSAYDMVLVEDDEVNRMHESLHLFNSICNHRYFATTSIVLFLNKKDVFSEKIKKA 251 Query: 142 ----------------------EVNERQARELADKYGIPYFETSAATGQNVEKAVETLLD 179 +V + D I T A QNV+ + + D Sbjct: 252 HLSICFPDYNGPNTYEDAGNYIKVQFLELNMRRDVKEIYSHMTCATDTQNVKFVFDAVTD 311 Query: 180 LIMK 183 +I+K Sbjct: 312 IIIK 315 Score = 27.9 bits (61), Expect = 3.3, Method: Composition-based stats. Identities = 8/21 (38%), Positives = 12/21 (57%) Query: 8 YLIKLLALGDSGVGKTTFLYR 28 +KLL LG GK+T + + Sbjct: 2 RTVKLLLLGAGESGKSTIVKQ 22 >5KH0-A nrPDB Length = 396 Score = 43.0 bits (100), Expect = 9e-05, Method: Composition-based stats. Identities = 32/200 (16%), Positives = 64/200 (32%), Gaps = 37/200 (18%) Query: 12 LLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYNAQGPNGSSGKAFKVHLQ 71 + G VGK++F+ + V I + + + L Sbjct: 11 IAITGRRNVGKSSFMNALIGQE--------VSIVSNVAGTTTDPVFKSMELSPVGPITL- 61 Query: 72 LWDTAGQE--------RFRSLTTAFFRDAMGFLLMFDLTSQQSFLN-VRNWMSQLQANAY 122 DT G + R + + +R G L++ D+ +F + +L+ Sbjct: 62 -IDTPGLDDVGELGIKRIKKAKKSLYRADCGILIVDDI--PGNFEEQIIKLFKELE---- 114 Query: 123 CENPDIVLIGNKADLPDQREVNERQARELADKYGIPYFETSAATGQNVEKAVETLLDLIM 182 + NK D ++ + KY +P + SA E + I Sbjct: 115 ---IPYFIAINKID-----TIDHENIEKEYKKYNVPILKVSALKKIG----FEKIGKTIN 162 Query: 183 KRMEQCVEKTQIPDTVNGGN 202 + + E + D ++GG+ Sbjct: 163 SILPKDDEIPYLSDLIDGGD 182 >6OIK-A nrPDB Length = 354 Score = 43.0 bits (100), Expect = 1e-04, Method: Composition-based stats. Identities = 26/180 (14%), Positives = 46/180 (25%), Gaps = 38/180 (21%) Query: 37 KFITTVGIDFREKRVVYNAQGPNGSSGKAFKVHLQLWDTAGQERFRSLTTAFFRDAMGFL 96 + T + R G + +H +L+D GQ R F D + Sbjct: 167 DYQPT---EQDILRTRVKTTGIVETHFTFKNLHFRLFDVGGQRSERKKWIHCFEDVTAII 223 Query: 97 LMFDLT----------SQQSFLNVRNWMSQLQANAYCENPDIVLIGNKADLPDQR----- 141 L+ + + N + + I+L NK DL ++ Sbjct: 224 FCVALSGYDQVLHEDETTNRMHESLMLFDSICNNKFFIDTSIILFLNKKDLFGEKIKKSP 283 Query: 142 ----------EVNERQARELAD----------KYGIPYFETSAATGQNVEKAVETLLDLI 181 A I T A N++ + + D+I Sbjct: 284 LTICFPEYTGPNTYEDAAAYIQAQFESKNRSPNKEIYCHMTCATDTNNIQVVFDAVTDII 343 Score = 31.0 bits (69), Expect = 0.44, Method: Composition-based stats. Identities = 24/131 (18%), Positives = 43/131 (32%), Gaps = 38/131 (29%) Query: 10 IKLLALGDSGVGKTTFLYRYT-------DNKFNPKFIT------------------TVGI 44 +KLL LG GK+T + + + ++ T+GI Sbjct: 34 VKLLLLGAGESGKSTIVKQMKIIHEDGFSGEDVKQYKPVVYSNTIQSLAAIVRAMDTLGI 93 Query: 45 DFREKR----------VVYNAQGPNGSSGKAFKVHLQLW-DTAGQERFRSLTTAFFRDAM 93 ++ +K VV + S + ++LW D+ QE F D+ Sbjct: 94 EYGDKERKADAKMVCDVVSRMEDTEPFSAELLSAMMRLWGDSGIQECFNRSREYQLNDSA 153 Query: 94 GFLLMFDLTSQ 104 + L D + Sbjct: 154 KYYL--DSLDR 162 >2QAG-A nrPDB Length = 361 Score = 42.6 bits (99), Expect = 1e-04, Method: Composition-based stats. Identities = 17/82 (20%), Positives = 34/82 (41%), Gaps = 3/82 (3%) Query: 8 YLIKLLALGDSGVGKTTFLYR-YTDNKFNPKFITTVGIDFREKRVVYNAQGPNGSSGKAF 66 + L+ +G+SG+GK+T + + + + + I G + +R V + Sbjct: 36 FEFTLMVVGESGLGKSTLINSLFLTDLYPERVIP--GAAEKIERTVQIEASTVEIEERGV 93 Query: 67 KVHLQLWDTAGQERFRSLTTAF 88 K+ L + DT G + F Sbjct: 94 KLRLTVVDTPGYGDAINCRDCF 115 >4UJC-AB nrPDB Length = 627 Score = 42.6 bits (99), Expect = 1e-04, Method: Composition-based stats. Identities = 43/231 (18%), Positives = 72/231 (31%), Gaps = 61/231 (26%) Query: 12 LLALGDSGVGKTTFL--YRYTDNKFNPKFITT--VGIDFREKRVVYNAQGPNGSSGKAFK 67 + LG GKT L R+T + T +G N Q + Sbjct: 41 ICVLGHVDTGKTKILDKLRHTHVQDGEAGGITQQIGAT-NVPLEAINEQTKMIKNFDREN 99 Query: 68 VH---LQLWDTAGQERFRSLTTAFFRDAMGFLLMFDLT---SQQSFLNVRNWMSQLQANA 121 V + + DT G E F +L +L+ D+ Q+ ++ L + Sbjct: 100 VRIPGMLIIDTPGHESFSNLRNRGSSLCDIAILVVDIMHGLEPQTIESI-----NLLKSK 154 Query: 122 YCENPDIVLIGNKAD----------------LPDQREVNERQARELADKY---------- 155 C ++ NK D L Q++ + + E A Sbjct: 155 KC---PFIVALNKIDRLYDWKKSPDSDVAATLKKQKKNTKDEFEERAKAIIVEFAQQGLN 211 Query: 156 GIPYFE------------TSAATGQNVEKAVETLLDL----IMKRMEQCVE 190 ++E TSA TG + + L++L + KR+ C E Sbjct: 212 AALFYENKDPRTFVSLVPTSAHTGDGMGSLIYLLVELTQTMLSKRLAHCEE 262 >4TN1-B nrPDB Length = 345 Score = 42.6 bits (99), Expect = 1e-04, Method: Composition-based stats. Identities = 34/189 (17%), Positives = 58/189 (30%), Gaps = 35/189 (18%) Query: 12 LLALGDSGVGKTTFL--YRYTDNKFNPKFITT--VGIDF------REKRVVYNAQGPNGS 61 LG GKT L R T+ + T +G + ++K V N G Sbjct: 13 CCILGHVRTGKTKLLDKIRQTNVQEGEAGGITQQIGATYFPVEAIKQKTAVVNKDGKFEF 72 Query: 62 SGKAFKVHLQLWDTAGQERFRSLTTAFFRDAMGFLLMFDLT---SQQSFLNVRNWMSQLQ 118 L + DT G E F +L + +L+ D+ Q+ ++R Sbjct: 73 KVPG----LLIIDTPGHESFSNLRSRGSSLCNIAILVVDIMHGLEPQTIESLRLLRE--- 125 Query: 119 ANAYCENPDIVLIGNKADLPDQREVNERQARELADKYGIPYFETSAATGQNVEKAVETLL 178 V+ NK D + + E+ A + V+ L Sbjct: 126 -----RKTPFVVALNKID----------RLYGWKKIENNGFRESFALQNKAVQNEFRNRL 170 Query: 179 DLIMKRMEQ 187 D + + + Sbjct: 171 DQVKLQFAE 179 >4NCL-A nrPDB Length = 457 Score = 42.2 bits (98), Expect = 2e-04, Method: Composition-based stats. Identities = 34/189 (17%), Positives = 58/189 (30%), Gaps = 35/189 (18%) Query: 12 LLALGDSGVGKTTFL--YRYTDNKFNPKFITT--VGIDF------REKRVVYNAQGPNGS 61 LG GKT L R T+ + T +G + ++K V N G Sbjct: 13 CCILGHVDTGKTKLLDKIRQTNVQEGEAGGITQQIGATYFPVEAIKQKTAVVNKDGKFEF 72 Query: 62 SGKAFKVHLQLWDTAGQERFRSLTTAFFRDAMGFLLMFDLT---SQQSFLNVRNWMSQLQ 118 L + DT G E F +L + +L+ D+ Q+ ++R Sbjct: 73 KVPG----LLIIDTPGHESFSNLRSRGSSLCNIAILVVDIMHGLEPQTIESLRLLRE--- 125 Query: 119 ANAYCENPDIVLIGNKADLPDQREVNERQARELADKYGIPYFETSAATGQNVEKAVETLL 178 V+ NK D + + E+ A + V+ L Sbjct: 126 -----RKTPFVVALNKID----------RLYGWKKIENNGFRESFALQNKAVQNEFRNRL 170 Query: 179 DLIMKRMEQ 187 D + + + Sbjct: 171 DQVKLQFAE 179 >3T5D-A nrPDB Length = 274 Score = 42.2 bits (98), Expect = 2e-04, Method: Composition-based stats. Identities = 17/71 (23%), Positives = 34/71 (47%), Gaps = 4/71 (5%) Query: 8 YLIKLLALGDSGVGKTTFLYR-YTDNKFNPKFITTVGIDFREKRVVYNAQGPNGSSGKAF 66 + L+ +G+SG+GK+T + + + ++P++ G R K+ V Q Sbjct: 7 FEFTLMVVGESGLGKSTLINSLFLTDLYSPEY---PGPSHRIKKTVQVEQSKVLIKEGGV 63 Query: 67 KVHLQLWDTAG 77 ++ L + DT G Sbjct: 64 QLLLTIVDTPG 74 >4N3G-A nrPDB Length = 603 Score = 42.2 bits (98), Expect = 2e-04, Method: Composition-based stats. Identities = 34/189 (17%), Positives = 58/189 (30%), Gaps = 35/189 (18%) Query: 12 LLALGDSGVGKTTFL--YRYTDNKFNPKFITT--VGIDF------REKRVVYNAQGPNGS 61 LG GKT L R T+ + T +G + ++K V N G Sbjct: 13 CCILGHVDTGKTKLLDKIRQTNVQEGEAGGITQQIGATYFPVEAIKQKTAVVNKDGKFEF 72 Query: 62 SGKAFKVHLQLWDTAGQERFRSLTTAFFRDAMGFLLMFDLT---SQQSFLNVRNWMSQLQ 118 L + DT G E F +L + +L+ D+ Q+ ++R Sbjct: 73 KVPG----LLIIDTPGHESFSNLRSRGSSLCNIAILVVDIMHGLEPQTIESLRLLRE--- 125 Query: 119 ANAYCENPDIVLIGNKADLPDQREVNERQARELADKYGIPYFETSAATGQNVEKAVETLL 178 V+ NK D + + E+ A + V+ L Sbjct: 126 -----RKTPFVVALNKID----------RLYGWKKIENNGFRESFALQNKAVQNEFRNRL 170 Query: 179 DLIMKRMEQ 187 D + + + Sbjct: 171 DQVKLQFAE 179 >3FTQ-A nrPDB Length = 274 Score = 42.2 bits (98), Expect = 2e-04, Method: Composition-based stats. Identities = 17/82 (20%), Positives = 34/82 (41%), Gaps = 3/82 (3%) Query: 8 YLIKLLALGDSGVGKTTFLYR-YTDNKFNPKFITTVGIDFREKRVVYNAQGPNGSSGKAF 66 + L+ +G+SG+GK+T + + + + + I G + +R V + Sbjct: 4 FEFTLMVVGESGLGKSTLINSLFLTDLYPERIIP--GAAEKIERTVQIEASTVEIEERGV 61 Query: 67 KVHLQLWDTAGQERFRSLTTAF 88 K+ L + DT G + F Sbjct: 62 KLRLTVVDTPGYGDAINCRDCF 83 >4WQY-BZ nrPDB Length = 758 Score = 41.8 bits (97), Expect = 2e-04, Method: Composition-based stats. Identities = 24/123 (19%), Positives = 37/123 (30%), Gaps = 11/123 (8%) Query: 20 VGKTTFLYRYTD-----NKFNPKFITTVGIDFREKRVVYNAQGPNGSSGKAFKVH-LQLW 73 GKTT R +K +DF E+ + +K H + + Sbjct: 90 AGKTTTTERILYYTGRIHKIGEVHEGAATMDFMEQERERGITITAAVTTCFWKDHRINII 149 Query: 74 DTAGQERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVRNWMSQLQANAYCENPDIVLIGN 133 DT G F R G +++FD + V + A + N Sbjct: 150 DTPGHVDFTIEVERSMRVLDGAIVVFDSS-----QGVEPQSETVWRQAEKYKVPRIAFAN 204 Query: 134 KAD 136 K D Sbjct: 205 KMD 207 >2QAG-C nrPDB Length = 418 Score = 41.8 bits (97), Expect = 2e-04, Method: Composition-based stats. Identities = 17/71 (23%), Positives = 34/71 (47%), Gaps = 4/71 (5%) Query: 8 YLIKLLALGDSGVGKTTFLYR-YTDNKFNPKFITTVGIDFREKRVVYNAQGPNGSSGKAF 66 + L+ +G+SG+GK+T + + + ++P++ G R K+ V Q Sbjct: 30 FEFTLMVVGESGLGKSTLINSLFLTDLYSPEY---PGPSHRIKKTVQVEQSKVLIKEGGV 86 Query: 67 KVHLQLWDTAG 77 ++ L + DT G Sbjct: 87 QLLLTIVDTPG 97 >1LNZ-A nrPDB Length = 342 Score = 41.4 bits (96), Expect = 3e-04, Method: Composition-based stats. Identities = 28/187 (14%), Positives = 59/187 (31%), Gaps = 28/187 (14%) Query: 10 IKLL----ALGDSGVGKTTFLYRY--TDNKFNPKFITTVGIDFREKRVVYNAQGPNGSSG 63 +K+L +G VGK+T L K TT+ + V + + Sbjct: 155 LKVLADVGLVGFPSVGKSTLLSVVSSAKPKIADYHFTTLVPNLGM--VETDDGRSFVMAD 212 Query: 64 KAFKVHLQLWDTAGQERFRSLTTAFFR---DAMGFLLMFDLT---SQQSFLNVRNWMSQL 117 + G + L F R + + D++ + + + +L Sbjct: 213 LPGLIE-------GAHQGVGLGHQFLRHIERTRVIVHVIDMSGLEGRDPYDDYLTINQEL 265 Query: 118 QANA-YCENPDIVLIGNKADLPDQREVNERQARELADKY--GIPYFETSAATGQNVEKAV 174 +++ NK D+P+ +K P F SA T + + + + Sbjct: 266 SEYNLRLTERPQIIVANKMDMPEA----AENLEAFKEKLTDDYPVFPISAVTREGLRELL 321 Query: 175 ETLLDLI 181 + + + Sbjct: 322 FEVANQL 328 >4V8Y-CP nrPDB Length = 339 Score = 41.4 bits (96), Expect = 3e-04, Method: Composition-based stats. Identities = 48/225 (21%), Positives = 73/225 (32%), Gaps = 55/225 (24%) Query: 12 LLALGDSGVGKTTFL--YRYTDNKFNPKFITT--VGID-FREKRVVYNAQGPNGSSGKAF 66 LG GKT L R T+ + T +G F + + + F Sbjct: 8 CCILGHVDTGKTKLLDKIRQTNVQGGEAGGITQQIGATYFPIDAIKAKTKVMAEYEKQTF 67 Query: 67 KVH-LQLWDTAGQERFRSLTTAFFRDAMGFLLMFDLT---SQQSFLNVRNWMSQLQANAY 122 V L + DT G E F +L + +L+ D+ QQ+ +++ Sbjct: 68 DVPGLLVIDTPGHESFSNLRSRGSSLCNIAILVIDIMHGLEQQTIESIKLLRD------- 120 Query: 123 CENPDIVLIGNKADL-----------------PDQREVNER-------QARELADK--YG 156 V+ NK D R V E ELA++ Sbjct: 121 -RKAPFVVALNKIDRLYDWKAIPNNSFRDSFAKQSRAVQEEFQSRYSKIQLELAEQGLNS 179 Query: 157 IPYFE------------TSAATGQNVEKAVETLLDLIMKRMEQCV 189 YF+ TSA TG+ V + LL+L KRM + + Sbjct: 180 ELYFQNKNMSKYVSIVPTSAVTGEGVPDLLWLLLELTQKRMSKQL 224 >1ZCA-A nrPDB Length = 359 Score = 41.4 bits (96), Expect = 3e-04, Method: Composition-based stats. Identities = 26/165 (15%), Positives = 45/165 (27%), Gaps = 36/165 (21%) Query: 55 AQGPNGSSGKAFKVHLQLWDTAGQERFRSLTTAFFRDAMGFLLMFDLT----------SQ 104 +G K+ ++ D GQ R F L M + Sbjct: 186 TKGIVEHDFVIKKIPFKMVDVGGQRSQRQKWFQCFDGITSILFMVSSSEYDQVLMEDRRT 245 Query: 105 QSFLNVRNWMSQLQANAYCENPDIVLIGNKADLPDQREVNERQARELADKYGIP------ 158 + N + N N I+L NK DL ++ + + D G P Sbjct: 246 NRLVESMNIFETIVNNKLFFNVSIILFLNKMDLLVEKVKSVSIKKHFPDFKGDPHRLEDV 305 Query: 159 --------------------YFETSAATGQNVEKAVETLLDLIMK 183 + T+A +N+ + D I++ Sbjct: 306 QRYLVQCFDRKRRNRSKPLFHHFTTAIDTENIRFVFHAVKDTILQ 350 Score = 30.6 bits (68), Expect = 0.52, Method: Composition-based stats. Identities = 13/45 (28%), Positives = 22/45 (48%), Gaps = 7/45 (15%) Query: 8 YLIKLLALGDSGVGKTTFLYR---YTDNKFNP----KFITTVGID 45 L+K+L LG GK+TFL + +F+ +F T+ + Sbjct: 34 RLVKILLLGAGESGKSTFLKQMRIIHGREFDQKALLEFRDTIFDN 78 >3IZY-P nrPDB Length = 537 Score = 41.0 bits (95), Expect = 4e-04, Method: Composition-based stats. Identities = 28/158 (17%), Positives = 53/158 (33%), Gaps = 28/158 (17%) Query: 21 GKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYNAQGPNGSSGKAFKVHLQLWDTAGQER 80 GKTT L +K + + + + S K+ DT G Sbjct: 16 GKTTLL-----DKLRKTQVAAMEAG----GITQHIGAFLVSLPSGEKITF--LDTPGHAA 64 Query: 81 FRSLTTAFFRDAMGFLLMFDLTS---QQSFLNVRNWMSQLQANAYCENPDIVLIGNKADL 137 F ++ + +L+ +Q+ +++ +A + IVL NK D Sbjct: 65 FSAMRARGTQVTDIVILVVAADDGVMKQTVESIQ--------HAKDAHVPIVLAINKCDK 116 Query: 138 PDQREVNERQARE----LADKYG--IPYFETSAATGQN 169 + ++ + + YG + SA TG+N Sbjct: 117 AEADPEKVKKELLAYDVVCEDYGGDVQAVHVSALTGEN 154 >2XTZ-A nrPDB Length = 354 Score = 41.0 bits (95), Expect = 4e-04, Method: Composition-based stats. Identities = 28/178 (15%), Positives = 52/178 (29%), Gaps = 25/178 (14%) Query: 37 KFITTVGIDFREK---RVVYNAQGPNGSSGKAFKVHLQLWDTAGQERFRSLTTAFFRDAM 93 +I T + V Q K +L+D GQ R F Sbjct: 149 NYIPTKEDVLYARVRTTGVVEIQFSPVGENKKSGEVYRLFDVGGQRNERRKWIHLFEGVT 208 Query: 94 GFLLM-----FDLT-----SQQSFLNVRNWMSQLQANAYCENPDIVLIGNKADLPDQRE- 142 + +D T + + + + E +L NK D+ +++ Sbjct: 209 AVIFCAAISEYDQTLFEDEQKNRMMETKELFDWVLKQPCFEKTSFMLFLNKFDIFEKKVL 268 Query: 143 -VNERQARELADKYGIPYFETSAATGQNVEKAVETLLDLIMKRMEQCVEKTQIPDTVN 199 V D Y S+ + +E + + K+ E+ + PD V+ Sbjct: 269 DVPLNVCEWFRD-----YQPVSSGKQE-----IEHAYEFVKKKFEELYYQNTAPDRVD 316 Score = 30.2 bits (67), Expect = 0.76, Method: Composition-based stats. Identities = 11/76 (14%), Positives = 25/76 (32%), Gaps = 7/76 (9%) Query: 4 GDYDYLIKLLALGDSGVGKTTFLYR---YTDNKFNP----KFITTVGIDFREKRVVYNAQ 56 G ++ KLL LG GK+T + F+ ++ + + + + + Sbjct: 4 GSGIHIRKLLLLGAGESGKSTIFKQIKLLFQTGFDEGELKSYVPVIHANVYQTIKLLHDG 63 Query: 57 GPNGSSGKAFKVHLQL 72 + + L Sbjct: 64 TKEFAQNETDSAKYML 79 >4NCF-A nrPDB Length = 457 Score = 41.0 bits (95), Expect = 4e-04, Method: Composition-based stats. Identities = 48/225 (21%), Positives = 73/225 (32%), Gaps = 55/225 (24%) Query: 12 LLALGDSGVGKTTFL--YRYTDNKFNPKFITT--VGID-FREKRVVYNAQGPNGSSGKAF 66 LG GKT L R T+ + T +G F + + + F Sbjct: 13 CCILGHVDTGKTKLLDKIRQTNVQGGEAGGITQQIGATYFPIDAIKAKTKVMAEYEKQTF 72 Query: 67 KVH-LQLWDTAGQERFRSLTTAFFRDAMGFLLMFDLT---SQQSFLNVRNWMSQLQANAY 122 V L + DT G E F +L + +L+ D+ QQ+ +++ Sbjct: 73 DVPGLLVIDTPGHESFSNLRSRGSSLCNIAILVIDIMHGLEQQTIESIKLLRD------- 125 Query: 123 CENPDIVLIGNKADL-----------------PDQREVNER-------QARELADK--YG 156 V+ NK D R V E ELA++ Sbjct: 126 -RKAPFVVALNKIDRLYDWKAIPNNSFRDSFAKQSRAVQEEFQSRYSKIQLELAEQGLNS 184 Query: 157 IPYFE------------TSAATGQNVEKAVETLLDLIMKRMEQCV 189 YF+ TSA TG+ V + LL+L KRM + + Sbjct: 185 ELYFQNKNMSKYVSIVPTSAVTGEGVPDLLWLLLELTQKRMSKQL 229 >3WBI-A nrPDB Length = 606 Score = 40.6 bits (94), Expect = 5e-04, Method: Composition-based stats. Identities = 48/225 (21%), Positives = 73/225 (32%), Gaps = 55/225 (24%) Query: 12 LLALGDSGVGKTTFL--YRYTDNKFNPKFITT--VGID-FREKRVVYNAQGPNGSSGKAF 66 LG GKT L R T+ + T +G F + + + F Sbjct: 12 CCILGHVDTGKTKLLDKIRQTNVQGGEAGGITQQIGATYFPIDAIKAKTKVMAEYEKQTF 71 Query: 67 KVH-LQLWDTAGQERFRSLTTAFFRDAMGFLLMFDLT---SQQSFLNVRNWMSQLQANAY 122 V L + DT G E F +L + +L+ D+ QQ+ +++ Sbjct: 72 DVPGLLVIDTPGHESFSNLRSRGSSLCNIAILVIDIMHGLEQQTIESIKLLRD------- 124 Query: 123 CENPDIVLIGNKADL-----------------PDQREVNER-------QARELADK--YG 156 V+ NK D R V E ELA++ Sbjct: 125 -RKAPFVVALNKIDRLYDWKAIPNNSFRDSFAKQSRAVQEEFQSRYSKIQLELAEQGLNS 183 Query: 157 IPYFE------------TSAATGQNVEKAVETLLDLIMKRMEQCV 189 YF+ TSA TG+ V + LL+L KRM + + Sbjct: 184 ELYFQNKNMSKYVSIVPTSAVTGEGVPDLLWLLLELTQKRMSKQL 228 >1G7S-A nrPDB Length = 594 Score = 40.6 bits (94), Expect = 5e-04, Method: Composition-based stats. Identities = 25/134 (18%), Positives = 48/134 (35%), Gaps = 15/134 (11%) Query: 70 LQLWDTAGQERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVRNWMSQLQANAYCENPDIV 129 L DT G E F +L A +L+ D+ + + V Sbjct: 72 LFFIDTPGHEAFTTLRKRGGALADLAILIVDIN-----EGFKPQTQEALNILRMYRTPFV 126 Query: 130 LIGNKADLPDQREVNERQARELADKYGIPYFETSAATGQNVEKAVETLLDLIMKRMEQCV 189 + NK D V+E G P+ ET + V++ ++T + ++ ++ + Sbjct: 127 VAANKIDRIHGWRVHE----------GRPFMETFSKQDIQVQQKLDTKVYELVGKLHEEG 176 Query: 190 EKTQIPDTVNGGNS 203 +++ D V S Sbjct: 177 FESERFDRVTDFAS 190 >4V8Z-CV nrPDB Length = 586 Score = 40.3 bits (93), Expect = 6e-04, Method: Composition-based stats. Identities = 28/134 (20%), Positives = 45/134 (33%), Gaps = 17/134 (12%) Query: 12 LLALGDSGVGKTTFL--YRYTDNKFNPKFITT--VGID-FREKRVVYNAQGPNGSSGKAF 66 LG GKT L R T+ + T +G F + + + F Sbjct: 8 CCILGHVDTGKTKLLDKIRQTNVQGGEAGGITQQIGATYFPIDAIKAKTKVMAEYEKQTF 67 Query: 67 KVH-LQLWDTAGQERFRSLTTAFFRDAMGFLLMFDLT---SQQSFLNVRNWMSQLQANAY 122 V L + DT G E F +L + +L+ D+ QQ+ +++ Sbjct: 68 DVPGLLVIDTPGHESFSNLRSRGSSLCNIAILVIDIMHGLEQQTIESIKLLRD------- 120 Query: 123 CENPDIVLIGNKAD 136 V+ NK D Sbjct: 121 -RKAPFVVALNKID 133 >4V7F-o nrPDB Length = 647 Score = 40.3 bits (93), Expect = 6e-04, Method: Composition-based stats. Identities = 35/196 (17%), Positives = 67/196 (34%), Gaps = 28/196 (14%) Query: 12 LLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYNAQGPNGSSGKAFKVHLQ 71 LL G VGK++FL T + D + + + + Q Sbjct: 170 LLICGYPNVGKSSFLRCITKS------------DVDVQPYAFTTKSLYVGHFDYKYLRFQ 217 Query: 72 LWDTAG-----QERFRSLT-TAFFRDAM---GFLLMFDLTSQQSF--LNVRNWMSQLQAN 120 DT G E ++ + + A L DL+ Q F ++ Sbjct: 218 AIDTPGILDRPTEEMNNIEMQSIYAIAHLRSCVLYFMDLSEQCGFTIEAQVKLFHSIK-- 275 Query: 121 AYCENPDIVLIGNKADLPDQREVNERQARELADKYGIPYFET---SAATGQNVEKAVETL 177 N ++++ NK D+ +++E +A+ L +P E S +NV + Sbjct: 276 PLFANKSVMVVINKTDIIRPEDLDEERAQLLESVKEVPGVEIMTSSCQLEENVMEVRNKA 335 Query: 178 LDLIMKRMEQCVEKTQ 193 + ++ + K+Q Sbjct: 336 CEKLLASRIENKLKSQ 351 >3JB9-B nrPDB Length = 984 Score = 39.9 bits (92), Expect = 8e-04, Method: Composition-based stats. Identities = 27/127 (21%), Positives = 43/127 (33%), Gaps = 17/127 (13%) Query: 21 GKTTFLYRYTD----NKFNPK-----FITTVGIDFREKRVVYNAQGPN--GSSGKAFKVH 69 GK+ L + PK + T ++ RE+ + + S K Sbjct: 153 GKSALLDLLVYYTHPDTKPPKRRSLRYTDTHYLE-RERVMSIKSTPLTLAVSDMKGKTFA 211 Query: 70 LQLWDTAGQERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVRNWMSQLQANAYCENPDIV 129 Q DT G F A + G +L+ D+ R + +A + IV Sbjct: 212 FQCIDTPGHVDFVDEVAAPMAISDGVVLVVDVIEGVMINTTR-----IIKHAILHDMPIV 266 Query: 130 LIGNKAD 136 L+ NK D Sbjct: 267 LVLNKVD 273 >1ZUN-B nrPDB Length = 434 Score = 39.5 bits (91), Expect = 0.001, Method: Composition-based stats. Identities = 37/204 (18%), Positives = 70/204 (34%), Gaps = 50/204 (24%) Query: 5 DYDYLIKLLALGDSGVGKTTFLYRYTDNKF------------NPKFITTVGIDFREKRVV 52 + +++ L G+ GK+T + R + + K T G D ++ Sbjct: 20 ERKEMLRFLTCGNVDDGKSTLIGRLLHDSKMIYEDHLEAITRDSKKSGTTGDDVDL-ALL 78 Query: 53 YNAQGPNGSSGKAFKV----------HLQLWDTAGQERF-RSLTTAFFRDAMGFLLM--- 98 + G V + DT G E++ R++ T + +L+ Sbjct: 79 VDGLQAEREQGITIDVAYRYFSTAKRKFIIADTPGHEQYTRNMATGASTCDLAIILVDAR 138 Query: 99 FDL---TSQQSFLNVRNWMSQLQANAYCENPDIVLIGNKADLP--DQREVNERQA--REL 151 + + T + S+ ++ L + IV+ NK DL D+R +A + Sbjct: 139 YGVQTQTRRHSY------IASLLGIKH-----IVVAINKMDLNGFDERVFESIKADYLKF 187 Query: 152 ADKYGIP-----YFETSAATGQNV 170 A+ + SA G NV Sbjct: 188 AEGIAFKPTTMAFVPMSALKGDNV 211 >1ZCB-A nrPDB Length = 362 Score = 39.5 bits (91), Expect = 0.001, Method: Composition-based stats. Identities = 24/165 (14%), Positives = 50/165 (30%), Gaps = 37/165 (22%) Query: 55 AQGPNGSSGKAFKVHLQLWDTAGQERFRSLTTAFFRDAMGFLLMFDLT--------SQQS 106 +G + + V ++ D GQ R F L + + +Q+ Sbjct: 188 TKGIHEYDFEIKNVPFKMVDVGGQRSERKRWFECFDSVTSILFLVSSSEFDQVLMEDRQT 247 Query: 107 --FLNVRNWMSQLQANAYCENPDIVLIGNKADLPDQR--EVNER--------------QA 148 N + N N I+L NK DL +++ V+ + Sbjct: 248 NRLTESLNIFETIVNNRVFSNVSIILFLNKTDLLEEKVQVVSIKDYFLEFEGDPHCLRDV 307 Query: 149 RELA-----------DKYGIPYFETSAATGQNVEKAVETLLDLIM 182 ++ + + + T+A +N+ + D I+ Sbjct: 308 QKFLVECFRGKRRDQQQRPLYHHFTTAINTENIRLVFRDVKDTIL 352 Score = 32.2 bits (72), Expect = 0.19, Method: Composition-based stats. Identities = 21/78 (26%), Positives = 34/78 (43%), Gaps = 9/78 (11%) Query: 3 DGDY-DYLIKLLALGDSGVGKTTFL--YRYTDNK-FN----PKFITTVGIDF-REKRVVY 53 DG+ L+K+L LG GK+TFL R + F+ +F T+ + + RV+ Sbjct: 26 DGERSARLVKILLLGAGESGKSTFLKQMRIIHGQDFDQRAREEFRPTIYSNVIKGMRVLV 85 Query: 54 NAQGPNGSSGKAFKVHLQ 71 +A+ K L Sbjct: 86 DAREKLHIPWGDNKNQLH 103 >3R9W-A nrPDB Length = 307 Score = 39.1 bits (90), Expect = 0.001, Method: Composition-based stats. Identities = 34/187 (18%), Positives = 65/187 (34%), Gaps = 40/187 (21%) Query: 12 LLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYNAQGPNGSSGKAFKVHLQ 71 + +G VGK+T L K ++ + R+ + + + Sbjct: 12 VAIVGKPNVGKSTLLNNLLGTK-----VSIISPKAGTTRMRVLGVKNIPN-----EAQII 61 Query: 72 LWDTAG-QERFRS---------LTTAFFRDAMGFLLMFDLTS--QQSFLNV-RNWMSQLQ 118 DT G E +S + +A L M D T + + +N++ L Sbjct: 62 FLDTPGIYEPKKSDVLGHSMVEIAKQSLEEADVILFMIDATEGWRPRDEEIYQNFIKPL- 120 Query: 119 ANAYCENPDIVLIGNKADLPDQREVNERQARELADKYGIPYFE------TSAATGQNVEK 172 N ++++ NK D + + L D+ + E SA G N+++ Sbjct: 121 ------NKPVIVVINKID----KIGPAKNVLPLIDEIHKKHPELTEIVPISALKGANLDE 170 Query: 173 AVETLLD 179 V+T+L Sbjct: 171 LVKTILK 177 >4KJZ-A nrPDB Length = 473 Score = 38.7 bits (89), Expect = 0.002, Method: Composition-based stats. Identities = 34/196 (17%), Positives = 65/196 (33%), Gaps = 28/196 (14%) Query: 12 LLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYNAQGPNGSSGKAFKVHLQ 71 ++ +G GKTT L ++ K + Q K + + Sbjct: 75 VVIMGHVDHGKTTLLDYLRKSRIAEKEAGGIT------------QHVGAFEVKTPQGTVV 122 Query: 72 LWDTAGQERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVRNWMSQLQANAYCENPDIVLI 131 DT G E F ++ + A +++ + + A+A ++ Sbjct: 123 FIDTPGHEAFTTIRQRGAKVADIAVIVIAADDG-----IMPQTEEAIAHAKAAGAKLIFA 177 Query: 132 GNKADLPDQREVNERQARE----LADKYG--IPYFETSAATGQNVEKAVETLLDLIMKRM 185 NK DLP ++ + ++YG SA TGQ V+ +E +L + Sbjct: 178 INKIDLPQADPEKVKRQLMERGFVPEEYGGDAIVIPISAKTGQGVQDLLEMIL-----LL 232 Query: 186 EQCVEKTQIPDTVNGG 201 + + P+ G Sbjct: 233 AELEDYRADPNAEPRG 248 >4B44-A nrPDB Length = 363 Score = 38.7 bits (89), Expect = 0.002, Method: Composition-based stats. Identities = 34/196 (17%), Positives = 65/196 (33%), Gaps = 28/196 (14%) Query: 12 LLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYNAQGPNGSSGKAFKVHLQ 71 ++ +G GKTT L ++ K + Q K + + Sbjct: 76 VVIMGHVDHGKTTLLDYLRKSRIAEKEAGGIT------------QHVGAFEVKTPQGTVV 123 Query: 72 LWDTAGQERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVRNWMSQLQANAYCENPDIVLI 131 DT G E F ++ + A +++ + + A+A ++ Sbjct: 124 FIDTPGHEAFTTIRQRGAKVADIAVIVIAADDG-----IMPQTEEAIAHAKAAGAKLIFA 178 Query: 132 GNKADLPDQREVNERQARE----LADKYG--IPYFETSAATGQNVEKAVETLLDLIMKRM 185 NK DLP ++ + ++YG SA TGQ V+ +E +L + Sbjct: 179 INKIDLPQADPEKVKRQLMERGFVPEEYGGDAIVIPISAKTGQGVQDLLEMIL-----LL 233 Query: 186 EQCVEKTQIPDTVNGG 201 + + P+ G Sbjct: 234 AELEDYRADPNAEPRG 249 >4ZKD-A nrPDB Length = 499 Score = 38.7 bits (89), Expect = 0.002, Method: Composition-based stats. Identities = 38/208 (18%), Positives = 70/208 (33%), Gaps = 48/208 (23%) Query: 12 LLALGDSGVGKTTFLYRYTDN-------------KFNPKFITTVGIDFREKRVVYNAQGP 58 L LGD+ GK+T L + K + + F+ + Sbjct: 22 CLFLGDTNAGKSTLLGHLLYDLNEISMSSMRELQKKSSNLDPSSSNSFKVILDNTKTERE 81 Query: 59 NGSSGKAFKV-----------HLQLWDTAGQERF---RSLTTAFFRDAMGFLLMFDLTS- 103 NG S + L L DT G ++ +L + D ++L+ D Sbjct: 82 NGFSMFKKVIQVENDLLPPSSTLTLIDTPGSIKYFNKETLNSILTFDPEVYVLVIDCNYD 141 Query: 104 --QQSFLNVRNWMSQLQ-------ANAYCENPDIVLIGNKADL----PDQREVNERQARE 150 ++S N + ++ N+ C+ I+L+ NKADL + E+ + + Sbjct: 142 SWEKSLDGPNNQIYEILKVISYLNKNSACKKHLIILL-NKADLISWDKHRLEMIQSELNY 200 Query: 151 LADKY------GIPYFETSAATGQNVEK 172 + + + S G N+ K Sbjct: 201 VLKENFQWTDAEFQFIPCSGLLGSNLNK 228 >4V89-AW nrPDB Length = 534 Score = 38.7 bits (89), Expect = 0.002, Method: Composition-based stats. Identities = 15/70 (21%), Positives = 22/70 (31%), Gaps = 5/70 (7%) Query: 67 KVHLQLWDTAGQERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVRNWMSQLQANAYCENP 126 + L DT G E F T L++ D V + +L + Sbjct: 81 DCLVNLLDTPGHEDFSEDTYRTLTAVDCCLMVIDAAKG-----VEDRTRKLMEVTRLRDT 135 Query: 127 DIVLIGNKAD 136 I+ NK D Sbjct: 136 PILTFMNKLD 145 >3J4J-A nrPDB Length = 569 Score = 38.3 bits (88), Expect = 0.002, Method: Composition-based stats. Identities = 34/196 (17%), Positives = 65/196 (33%), Gaps = 28/196 (14%) Query: 12 LLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYNAQGPNGSSGKAFKVHLQ 71 ++ +G GKTT L ++ K + Q K + + Sbjct: 76 VVIMGHVDHGKTTLLDYLRKSRIAEKEAGGIT------------QHVGAFEVKTPQGTVV 123 Query: 72 LWDTAGQERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVRNWMSQLQANAYCENPDIVLI 131 DT G E F ++ + A +++ + + A+A ++ Sbjct: 124 FIDTPGHEAFTTIRQRGAKVADIAVIVIAADDG-----IMPQTEEAIAHAKAAGAKLIFA 178 Query: 132 GNKADLPDQREVNERQARE----LADKYG--IPYFETSAATGQNVEKAVETLLDLIMKRM 185 NK DLP ++ + ++YG SA TGQ V+ +E +L + Sbjct: 179 INKIDLPQADPEKVKRQLMERGFVPEEYGGDAIVIPISAKTGQGVQDLLEMIL-----LL 233 Query: 186 EQCVEKTQIPDTVNGG 201 + + P+ G Sbjct: 234 AELEDYRADPNAEPRG 249 >5G06-P nrPDB Length = 747 Score = 38.3 bits (88), Expect = 0.002, Method: Composition-based stats. Identities = 38/208 (18%), Positives = 70/208 (33%), Gaps = 48/208 (23%) Query: 12 LLALGDSGVGKTTFLYRYTDN-------------KFNPKFITTVGIDFREKRVVYNAQGP 58 L LGD+ GK+T L + K + + F+ + Sbjct: 270 CLFLGDTNAGKSTLLGHLLYDLNEISMSSMRELQKKSSNLDPSSSNSFKVILDNTKTERE 329 Query: 59 NGSSGKAFKV-----------HLQLWDTAGQERF---RSLTTAFFRDAMGFLLMFDLTS- 103 NG S + L L DT G ++ +L + D ++L+ D Sbjct: 330 NGFSMFKKVIQVENDLLPPSSTLTLIDTPGSIKYFNKETLNSILTFDPEVYVLVIDCNYD 389 Query: 104 --QQSFLNVRNWMSQLQ-------ANAYCENPDIVLIGNKADL----PDQREVNERQARE 150 ++S N + ++ N+ C+ I+L+ NKADL + E+ + + Sbjct: 390 SWEKSLDGPNNQIYEILKVISYLNKNSACKKHLIILL-NKADLISWDKHRLEMIQSELNY 448 Query: 151 LADKY------GIPYFETSAATGQNVEK 172 + + + S G N+ K Sbjct: 449 VLKENFQWTDAEFQFIPCSGLLGSNLNK 476 >2QTH-A nrPDB Length = 364 Score = 38.3 bits (88), Expect = 0.003, Method: Composition-based stats. Identities = 30/173 (17%), Positives = 57/173 (32%), Gaps = 29/173 (16%) Query: 14 ALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYNAQGPNGSSGKAFKVHLQLW 73 +G + GKT+ T G+ + ++ P + + L Sbjct: 184 IVGYTNSGKTSLFNSLT------------GLTQKVDTKLFTTMSPKRYAIPINNRKIMLV 231 Query: 74 DTAGQER----------FRSLTTAFFRDAMGFLLMFDLT-SQQSFLNVRNWMSQLQANAY 122 DT G R F +L+ A + + +L+ D T S+ + ++ Sbjct: 232 DTVGFIRGIPPQIVDAFFVTLSEAKY--SDALILVIDSTFSENLLIETLQSSFEILREIG 289 Query: 123 CENPDIVLIGNKAD-LPDQREVNERQARELADKYGIPYFE---TSAATGQNVE 171 I++ NK D + +L+ + P F+ SA N+E Sbjct: 290 VSGKPILVTLNKIDKINGDLYKKLDLVEKLSKELYSPIFDVIPISALKRTNLE 342 >5IRR-A nrPDB Length = 308 Score = 38.3 bits (88), Expect = 0.003, Method: Composition-based stats. Identities = 20/83 (24%), Positives = 31/83 (37%), Gaps = 8/83 (9%) Query: 10 IKLLALGDSGVGKTTFLYRYT----DNKFNPKFITTVGIDFREKRVVYNAQGPNGSSGKA 65 IKL+ +GDSG+GKTT + + T FR ++ Sbjct: 27 IKLIVVGDSGLGKTTLIKSLISIPGERLQVHDGSYTPTEQFRRDPESLSSTVSWRDEEDR 86 Query: 66 FKVHLQLWDTAG----QERFRSL 84 ++ DT G + FR+L Sbjct: 87 VIWVYKIQDTPGYGDELDVFRNL 109 >5CYO-A nrPDB Length = 274 Score = 38.0 bits (87), Expect = 0.003, Method: Composition-based stats. Identities = 14/70 (20%), Positives = 31/70 (44%), Gaps = 1/70 (1%) Query: 8 YLIKLLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYNAQGPNGSSGKAFK 67 + ++ +G SG+GK+T + +K + K + + K + + + K + Sbjct: 3 FEFNIMVVGQSGLGKSTLINTLFKSKISRKSVQPTSEERIPKTIEIKS-ITHDIEEKGVR 61 Query: 68 VHLQLWDTAG 77 + L + DT G Sbjct: 62 MKLTVIDTPG 71 >3W5J-A nrPDB Length = 204 Score = 38.0 bits (87), Expect = 0.003, Method: Composition-based stats. Identities = 30/174 (17%), Positives = 62/174 (35%), Gaps = 16/174 (9%) Query: 11 KLLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYNAQGPNGSSGKAFKVHL 70 ++ LG GK+T R T + ++ +++ A Sbjct: 5 RIALLGMPNTGKSTLFNRMTGGAARVGNWPGITVELLSGKILLGADMVEIIDLPG----- 59 Query: 71 QLWDTAGQERFRSLTTAFFRDA--MGFLLMFDLTSQQSFLNVRNWMSQLQANAYCENPDI 128 ++D G + F D L++ + T + MS L N +I Sbjct: 60 -IYDLHGFSDDEQVVRHFLHDNVPDLALVILNAT------QIERQMSLLLQLKQL-NMNI 111 Query: 129 VLIGNKADLPDQREVNERQARELADKYGIPYFETSAATGQNVEKAVETLLDLIM 182 V++ N +D Q + R++++ IP F+ S G ++A++ + + Sbjct: 112 VVLLNMSDEAKQYGITIDS-RKMSELLQIPVFQLSGKYGTGYQEALQAVTRALR 164 >1U0L-A nrPDB Length = 301 Score = 38.0 bits (87), Expect = 0.003, Method: Composition-based stats. Identities = 25/119 (21%), Positives = 48/119 (40%), Gaps = 4/119 (3%) Query: 84 LTTAFFRDAMGFLLMFDLTSQQSFLNVRNWMSQLQANAYCENPDIVLIGNKADLPDQREV 143 LT + +L+ + ++ + + A + V++ NK DL D+ ++ Sbjct: 77 LTKPHVANVDQVILVVTVKMPET---STYIIDKFLVLAEKNELETVMVINKMDLYDEDDL 133 Query: 144 NERQARELADKYGIPYFETSAATGQNVEKAVETLLDLIMKRM-EQCVEKTQIPDTVNGG 201 + + E P +TSA TG +E+ E L I V K+ + + +N G Sbjct: 134 RKVRELEEIYSGLYPIVKTSAKTGMGIEELKEYLKGKISTMAGLSGVGKSSLLNAINPG 192 Score = 26.8 bits (58), Expect = 8.5, Method: Composition-based stats. Identities = 7/14 (50%), Positives = 9/14 (64%) Query: 14 ALGDSGVGKTTFLY 27 G SGVGK++ L Sbjct: 174 MAGLSGVGKSSLLN 187 >3EC1-A nrPDB Length = 369 Score = 37.6 bits (86), Expect = 0.004, Method: Composition-based stats. Identities = 19/66 (28%), Positives = 32/66 (48%), Gaps = 8/66 (12%) Query: 121 AYCENPDIVLIGNKADLPDQREVNERQ----ARELADKYGIPYFE---TSAATGQNVEKA 173 + + I+L+GNKADL R V + R +A++ G+ + SAA G + K Sbjct: 94 RFAADNPILLVGNKADLLP-RSVKYPKLLRWMRRMAEELGLCPVDVCLVSAAKGIGMAKV 152 Query: 174 VETLLD 179 +E + Sbjct: 153 MEAINR 158 >3H2Y-A nrPDB Length = 368 Score = 37.2 bits (85), Expect = 0.005, Method: Composition-based stats. Identities = 21/88 (23%), Positives = 39/88 (44%), Gaps = 12/88 (13%) Query: 97 LMFDLTSQQSFLNVRNWMSQLQANAYCENPDIVLIGNKADLPDQREVNERQAREL----A 152 L+ + F +W+ L + + N ++L+GNKADL + V + + A Sbjct: 72 LVVKIVDI--FDFNGSWLPGL--HRFVGNNKVLLVGNKADLIP-KSVKHDKVKHWMRYSA 126 Query: 153 DKYGIP---YFETSAATGQNVEKAVETL 177 + G+ F SAA GQ + + + + Sbjct: 127 KQLGLKPEDVFLISAAKGQGIAELADAI 154 Score = 27.6 bits (60), Expect = 4.3, Method: Composition-based stats. Identities = 8/32 (25%), Positives = 17/32 (53%), Gaps = 1/32 (3%) Query: 12 LLALGDSGVGKTTFLYRYTDNKFNPKFITTVG 43 + +G + VGK+TF+ R +F+ + + Sbjct: 163 VYVVGCTNVGKSTFINRMIK-EFSDETENVIT 193 >5AR1-A nrPDB Length = 303 Score = 37.2 bits (85), Expect = 0.006, Method: Composition-based stats. Identities = 15/82 (18%), Positives = 29/82 (35%), Gaps = 7/82 (8%) Query: 2 TDGDYDY---LIKLLALGDSGVGKTTFLYRYTDNKFNPKFITTV---GIDFREKRVVYNA 55 + Y ++ +G SG G++TF+ + TT+ E + Sbjct: 17 AENLYFQGGITFTVMIVGQSGSGRSTFINTLC-GQQVVDTSTTILLPTDTSTEIDLQLRE 75 Query: 56 QGPNGSSGKAFKVHLQLWDTAG 77 + + K+ L + DT G Sbjct: 76 ETVELEDDEGVKIQLNIIDTPG 97 >2WJG-A nrPDB Length = 188 Score = 37.2 bits (85), Expect = 0.006, Method: Composition-based stats. Identities = 27/192 (14%), Positives = 57/192 (29%), Gaps = 12/192 (6%) Query: 4 GDYDYLIKLLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYNAQGPNGSSG 63 G + ++ +G+ VGK+T T V ++ +E YN + Sbjct: 2 GSHMKSYEIALIGNPNVGKSTIFNALTGENVYIGNWPGVTVEKKEGEFEYNGEKFKVVDL 61 Query: 64 KAFKVHLQLWDTAGQERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVRNWMSQLQANAYC 123 TA + + L+ ++ + QL Sbjct: 62 PGVYSL-----TA--NSIDEIIARDYIINEKPDLVVNIVDATALERNLYLTLQLMEM--- 111 Query: 124 ENPDIVLIGNKADLPDQREVNERQARELADKYGIPYFETSAATGQNVEKAVETLLDLIMK 183 +++L NK DL + +L G+ SAA +E+ + + + Sbjct: 112 -GANLLLALNKMDLAKSLGIEID-VDKLEKILGVKVVPLSAAKKMGIEELKKAISIAVKD 169 Query: 184 RMEQCVEKTQIP 195 + ++ Sbjct: 170 KKTAEIKYPNFE 181 >4R98-A nrPDB Length = 271 Score = 36.8 bits (84), Expect = 0.007, Method: Composition-based stats. Identities = 27/189 (14%), Positives = 60/189 (31%), Gaps = 22/189 (11%) Query: 14 ALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYNAQGPNGSSGKAFKVHL--- 70 +G+ GKTT + T ++ VG ++ V + + + V L Sbjct: 8 LIGNPNSGKTTLFNQLTGSRQR------VG-NWAGVTVERKEGQFSTTDHQVTLVDLPGT 60 Query: 71 -QLWDTAGQERFRSLTTAFFR---DAMGFLLMFDLTSQQSFLNVRNWMSQLQANAYCENP 126 L + Q + DA + + D ++ + L Sbjct: 61 YSLTTISSQTSLDEQIACHYILSGDADLLINVVDASNLER-------NLYLTLQLLELGI 113 Query: 127 DIVLIGNKADLPDQREVNERQARELADKYGIPYFETSAATGQNVEKAVETLLDLIMKRME 186 ++ N D+ +++ + + L+ + G P A +NV+ ++ +D Sbjct: 114 PCIVALNMLDIAEKQNIRI-EIDALSARLGCPVIPLVATDTKNVQFVLKLAIDRYKANEN 172 Query: 187 QCVEKTQIP 195 + P Sbjct: 173 VELVHYAQP 181 >2WIC-A nrPDB Length = 267 Score = 36.8 bits (84), Expect = 0.007, Method: Composition-based stats. Identities = 26/212 (12%), Positives = 61/212 (28%), Gaps = 28/212 (13%) Query: 14 ALGDSGVGKTTFLYRYTDNKF--------NPKFITTVGIDFREKRVVYNAQGPNGSSGKA 65 +G+ GKTT + T + + + + + + G + + Sbjct: 8 LIGNPNSGKTTLFNQLTGARQRVGNWAGVTVERKEGIFATTDHQVTLVDLPGTYSLTTIS 67 Query: 66 FKVHLQLWDTAGQERFRSLTTAFFRDAMGFLL--MFDLTSQQSFLNVRNWMSQLQANAYC 123 + L + + +L + D ++ + L Sbjct: 68 SQTSLD----------EQIACHYILSGDADMLINVVDASNLER-------NLYLTLQLLE 110 Query: 124 ENPDIVLIGNKADLPDQREVNERQARELADKYGIPYFETSAATGQNVEKAVETLLDLIMK 183 V+ N D+ ++++V LA + G P + G+ +E L Sbjct: 111 LGIPCVVALNMLDIAEKQQVRID-IDALAARLGCPVIPLVSTRGRGIEALKIALDRHQAN 169 Query: 184 RMEQCVEKTQIPDTVNGGNSGNLDGEKPPEKK 215 + V Q + + + PP ++ Sbjct: 170 SDLELVHYPQPLLREADLLAQQMSAQIPPRQR 201 >2OHF-A nrPDB Length = 396 Score = 36.8 bits (84), Expect = 0.008, Method: Composition-based stats. Identities = 18/80 (22%), Positives = 31/80 (38%), Gaps = 5/80 (6%) Query: 4 GDYDYLIKLLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYNAQGPNGSSG 63 G + +K+ +G VGK+TF T+++ + + ID E RV + + Sbjct: 17 GRFGTSLKIGIVGLPNVGKSTFFNVLTNSQASAENFPFCTIDPNESRVPVPDERFDFLCQ 76 Query: 64 KAFKVH-----LQLWDTAGQ 78 L + D AG Sbjct: 77 YHKPASKIPAFLNVVDIAGL 96 >3P27-A nrPDB Length = 483 Score = 36.4 bits (83), Expect = 0.010, Method: Composition-based stats. Identities = 31/197 (15%), Positives = 54/197 (27%), Gaps = 41/197 (20%) Query: 13 LALGDSGVGKTTFLYRYTDN------------------------KFNPKFITTVGIDFRE 48 + LG GK+T + R + KF T R Sbjct: 37 VVLGHVDAGKSTLMGRLLYDLNIVNQSQLRKLQRESETMGKSSFKFAWIMDQTNEERERG 96 Query: 49 KRVVYNAQGPNGSSGKAFKVHLQLWDTAGQERFRSLTTAFFRDAMGFLLMFDLTS---QQ 105 V S + + + D G F A +L D ++ + Sbjct: 97 VTVSI-----CTSHFSTHRANFTIVDAPGHRDFVPNAIMGISQADMAILCVDCSTNAFES 151 Query: 106 SFLNVRNWMSQLQANAYCENPDIVLIGNKADLPDQREVNERQARE--LADKYGIPYFE-- 161 F + + ++++ NK D D + + + L I +FE Sbjct: 152 GFDLDGQTKEHMLLASSLGIHNLIIAMNKMDNVDWSQQRFEEIKSKLLPYLVDIGFFEDN 211 Query: 162 -----TSAATGQNVEKA 173 S +G+ V K Sbjct: 212 INWVPISGFSGEGVYKI 228 >5EE0-A nrPDB Length = 395 Score = 36.4 bits (83), Expect = 0.011, Method: Composition-based stats. Identities = 30/168 (17%), Positives = 56/168 (33%), Gaps = 23/168 (13%) Query: 4 GDYDYLIKLLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYNAQGPNG--- 60 G + +K+ +G VGK+TF T + ID E RV + + Sbjct: 20 GRFSSHLKIGIVGLPNVGKSTFFNIVTKLSIPAENFPFCTIDPNEARVYVPDERFDWLCQ 79 Query: 61 --SSGKAFKVHLQLWDTAGQERFRSLTT-------AFFRDAMGFLLMF------DLTS-Q 104 +L++ D AG R + R G + ++T Sbjct: 80 LYKPKSEVSAYLEINDIAGLVRGAHAGEGLGNAFLSHIRAVDGIFHVLRAFEDKEVTHID 139 Query: 105 QSFLNVRNWMSQLQANAYCENPDIVLIGNKA-DLPDQREVNERQAREL 151 S VR+ + + ++ + + NK DL + + + +L Sbjct: 140 DSVDPVRD-LETIGEELRLKDIEF--VQNKIDDLEKSMKRSNDKQLKL 184 >3IZQ-1 nrPDB Length = 611 Score = 36.0 bits (82), Expect = 0.013, Method: Composition-based stats. Identities = 31/197 (15%), Positives = 54/197 (27%), Gaps = 41/197 (20%) Query: 13 LALGDSGVGKTTFLYRYTDN------------------------KFNPKFITTVGIDFRE 48 + LG GK+T + R + KF T R Sbjct: 171 VVLGHVDAGKSTLMGRLLYDLNIVNQSQLRKLQRESETMGKSSFKFAWIMDQTNEERERG 230 Query: 49 KRVVYNAQGPNGSSGKAFKVHLQLWDTAGQERFRSLTTAFFRDAMGFLLMFDLTS---QQ 105 V S + + + D G F A +L D ++ + Sbjct: 231 VTVSI-----CTSHFSTHRANFTIVDAPGHRDFVPNAIMGISQADMAILCVDCSTNAFES 285 Query: 106 SFLNVRNWMSQLQANAYCENPDIVLIGNKADLPDQREVNERQARE--LADKYGIPYFE-- 161 F + + ++++ NK D D + + + L I +FE Sbjct: 286 GFDLDGQTKEHMLLASSLGIHNLIIAMNKMDNVDWSQQRFEEIKSKLLPYLVDIGFFEDN 345 Query: 162 -----TSAATGQNVEKA 173 S +G+ V K Sbjct: 346 INWVPISGFSGEGVYKI 362 >6O81-S nrPDB Length = 472 Score = 35.6 bits (81), Expect = 0.015, Method: Composition-based stats. Identities = 16/59 (27%), Positives = 26/59 (44%), Gaps = 5/59 (8%) Query: 128 IVLIGNKADLPDQREVNERQARELA-----DKYGIPYFETSAATGQNVEKAVETLLDLI 181 I+++ NK DL + + E+ + LA G P SA N+E E ++ I Sbjct: 185 ILILQNKIDLVKESQAKEQYEQILAFVQGTVAEGAPIIPISAQLKYNIEVVCEYIVKKI 243 >6FEC-S nrPDB Length = 422 Score = 35.6 bits (81), Expect = 0.015, Method: Composition-based stats. Identities = 16/59 (27%), Positives = 26/59 (44%), Gaps = 5/59 (8%) Query: 128 IVLIGNKADLPDQREVNERQARELA-----DKYGIPYFETSAATGQNVEKAVETLLDLI 181 I+++ NK DL + + E+ + LA G P SA N+E E ++ I Sbjct: 147 ILILQNKIDLVKESQAKEQYEQILAFVQGTVAEGAPIIPISAQLKYNIEVVCEYIVKKI 205 >6HZK-A nrPDB Length = 333 Score = 35.6 bits (81), Expect = 0.017, Method: Composition-based stats. Identities = 13/38 (34%), Positives = 23/38 (60%), Gaps = 4/38 (10%) Query: 11 KLLALG---DSGVGKTTFLYRYTDNKFNPKFITTVGID 45 +++ +G DSG GK+TFL R + F + +T + +D Sbjct: 6 RVVLIGVAGDSGCGKSTFLNRLA-DLFGTELMTVICLD 42 >1S0U-A nrPDB Length = 408 Score = 35.6 bits (81), Expect = 0.018, Method: Composition-based stats. Identities = 15/59 (25%), Positives = 27/59 (45%), Gaps = 5/59 (8%) Query: 128 IVLIGNKADLPDQREVNE--RQARELAD---KYGIPYFETSAATGQNVEKAVETLLDLI 181 I+++ NK DL D+++ E Q +E P SA N++ ++ + D I Sbjct: 138 IIIVQNKIDLVDEKQAEENYEQIKEFVKGTIAENAPIIPISAHHEANIDVLLKAIQDFI 196 >1ZO1-I nrPDB Length = 501 Score = 35.3 bits (80), Expect = 0.019, Method: Composition-based stats. Identities = 26/141 (18%), Positives = 50/141 (35%), Gaps = 21/141 (14%) Query: 70 LQLWDTAGQERFRSLTTAFFRDAMGFLLMFDLTS---QQSFLNVRNWMSQLQANAYCENP 126 + DT G F S+ + +L+ Q+ ++ +A Sbjct: 53 ITFLDTPGHAAFTSMRARGAQATDIVVLVVAADDGVMPQTIEAIQ--------HAKAAQV 104 Query: 127 DIVLIGNKADLPDQRE--VNERQARE--LADKYG--IPYFETSAATGQNVEKAVETLLDL 180 +V+ NK D P+ V ++ L +++G + SA G +++ LLD Sbjct: 105 PVVVAVNKIDKPEADPDRVKNELSQYGILPEEWGGESQFVHVSAKAGTGIDE----LLDA 160 Query: 181 IMKRMEQCVEKTQIPDTVNGG 201 I+ + E K +G Sbjct: 161 ILLQAEVLELKAVRKGMASGA 181 >1MJ1-A nrPDB Length = 405 Score = 34.9 bits (79), Expect = 0.026, Method: Composition-based stats. Identities = 15/69 (21%), Positives = 27/69 (39%), Gaps = 7/69 (10%) Query: 93 MGFLLMFDLTSQQSFLNVRNWMSQLQANAYCENPDIVLIGNKADLPDQRE---VNERQAR 149 G +L+ + +R + IV+ NK D+ D RE + E + R Sbjct: 100 DGAILVVSAADGR----MRQTREHILLARQVGVRYIVVFMNKVDMVDDRELLDLVEMEVR 155 Query: 150 ELADKYGIP 158 +L ++Y Sbjct: 156 DLLNQYEFR 164 >4Z54-A nrPDB Length = 287 Score = 34.9 bits (79), Expect = 0.030, Method: Composition-based stats. Identities = 17/68 (25%), Positives = 30/68 (44%), Gaps = 1/68 (1%) Query: 10 IKLLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYNAQGPNGSSGKAFKVH 69 ++ +G SG+GK+T + ++ + K + + K V A G G K+ Sbjct: 20 FNIMVVGQSGLGKSTLVNTLFKSQVSRKASSWNREEKIPKTVEIKAIGHVIEEG-GVKMK 78 Query: 70 LQLWDTAG 77 L + DT G Sbjct: 79 LTVIDTPG 86 >3JCN-b nrPDB Length = 890 Score = 34.9 bits (79), Expect = 0.030, Method: Composition-based stats. Identities = 30/196 (15%), Positives = 59/196 (30%), Gaps = 45/196 (22%) Query: 21 GKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYNAQGPNGSSG------KAFKVHLQLWD 74 GKT+ L D+ V + + + + + D Sbjct: 403 GKTSLL------------------DYIRSTKVASGEAGGITQHIGAYHVETENGMITFLD 444 Query: 75 TAGQERFRSLTTAFFRDAMGFLLMFDLTS---QQSFLNVRNWMSQLQANAYCENPDIVLI 131 T G F S+ + +L+ Q+ +++ + Sbjct: 445 TPGHAAFTSMRARGAQATDIVVLVVAADDGVMPQTIEAIQHAKAAQVPVVVA-------- 496 Query: 132 GNKADLPDQRE--VNERQARE--LADKYG--IPYFETSAATGQNVEKAVETLLDLIMKRM 185 NK D P+ V ++ L +++G + SA G +++ LLD I+ + Sbjct: 497 VNKIDKPEADPDRVKNELSQYGILPEEWGGESQFVHVSAKAGTGIDE----LLDAILLQA 552 Query: 186 EQCVEKTQIPDTVNGG 201 E K +G Sbjct: 553 EVLELKAVRKGMASGA 568 >5A9Z-CA nrPDB Length = 593 Score = 34.9 bits (79), Expect = 0.031, Method: Composition-based stats. Identities = 25/130 (19%), Positives = 42/130 (32%), Gaps = 17/130 (13%) Query: 21 GKTTFLYRYTD--NKFNPKFITT--VGIDFREKRVVYNAQGPNGSSGKAFKVHLQLWDTA 76 GKTT + + F+ + T V ++ ++ + + + DT Sbjct: 17 GKTTLVDKLLQQSGTFDSRAETQERVMDSNDLEKERGITILAKNTAAIKWDYRINIVDTP 76 Query: 77 GQERFRSLTTAFFRDAMGFLLMFDLTS----QQSFLNVRNWMSQLQANAYCENPDIVLIG 132 G F LL+ D Q F+ + + L+ IV+I Sbjct: 77 GHADFGGEVERVMSMVDSVLLVVDAFDGPMPQTRFVTKKAFAYGLK--------PIVVI- 127 Query: 133 NKADLPDQRE 142 NK D P R Sbjct: 128 NKVDRPGARP 137 >4V5G-AZ nrPDB Length = 406 Score = 34.5 bits (78), Expect = 0.035, Method: Composition-based stats. Identities = 15/69 (21%), Positives = 26/69 (37%), Gaps = 7/69 (10%) Query: 93 MGFLLMFDLTSQQSFLNVRNWMSQLQANAYCENPDIVLIGNKADLPDQRE---VNERQAR 149 G +L+ + + P IV+ NK D+ D E + E + R Sbjct: 101 DGAILVVSAADGP----MPQTREHILLARQVGVPYIVVFMNKVDMVDDPELLDLVEMEVR 156 Query: 150 ELADKYGIP 158 +L ++Y P Sbjct: 157 DLLNQYEFP 165 >1JAL-A nrPDB Length = 363 Score = 34.1 bits (77), Expect = 0.042, Method: Composition-based stats. Identities = 12/74 (16%), Positives = 21/74 (28%), Gaps = 5/74 (6%) Query: 10 IKLLALGDSGVGKTTFLYRYTDNKFNPKFIT--TVGIDFREKRV---VYNAQGPNGSSGK 64 K +G VGK+T T T+ + + +A + Sbjct: 3 FKCGIVGLPNVGKSTLFNALTKAGIEAANYPFCTIEPNTGVVPMPDPRLDALAEIVKPER 62 Query: 65 AFKVHLQLWDTAGQ 78 ++ D AG Sbjct: 63 ILPTTMEFVDIAGL 76 >5H7J-A nrPDB Length = 743 Score = 34.1 bits (77), Expect = 0.046, Method: Composition-based stats. Identities = 21/93 (22%), Positives = 32/93 (34%), Gaps = 6/93 (6%) Query: 64 KAFKVHLQLWDTAGQERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVRNWMSQLQANAYC 123 + + L DT G F T R G +++ D + V + A Sbjct: 87 EGKDYLINLIDTPGHVDFGGDVTRAMRAIDGVIIVVD-----AVEGVMPQTETVVRQALR 141 Query: 124 ENPDIVLIGNKAD-LPDQREVNERQARELADKY 155 E VL NK D L + ++ +Q E K Sbjct: 142 EYVKPVLFINKVDRLIRELKLTPQQMMERFSKI 174 >4KV9-A nrPDB Length = 412 Score = 34.1 bits (77), Expect = 0.052, Method: Composition-based stats. Identities = 19/73 (26%), Positives = 34/73 (46%), Gaps = 12/73 (16%) Query: 8 YLIKLLALGDSGVGKTTFLYRYTDNKF---NPKFITTVGIDFREKRVVYNAQGPNGSSGK 64 ++ +L +G++G+GK+T L + KF T D + K V Y+ + N Sbjct: 40 FVFNILCVGETGIGKSTLLETLFNQKFDFSPSTHDLT---DPKLKAVTYDLKEAN----- 91 Query: 65 AFKVHLQLWDTAG 77 K+ L + +T G Sbjct: 92 -VKLKLTVVETCG 103 >4V6W-Az nrPDB Length = 844 Score = 34.1 bits (77), Expect = 0.052, Method: Composition-based stats. Identities = 26/140 (18%), Positives = 42/140 (30%), Gaps = 29/140 (20%) Query: 21 GKTTFL-----------------YRYTDNKFNPKF-ITTV---GIDFREKRVVYNAQGPN 59 GK+T R+TD + + + T+ I + + Sbjct: 31 GKSTLTDSLVSKAGIIAGAKAGETRFTDTRKDEQERCITIKSTAISMYFEVEEKDLVFIT 90 Query: 60 GSSGKAFKVH---LQLWDTAGQERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVRNWMSQ 116 + + + L D+ G F S TA R G L++ D S Sbjct: 91 HPDQREKECKGFLINLIDSPGHVDFSSEVTAALRVTDGALVVVDCVSGVCVQT-----ET 145 Query: 117 LQANAYCENPDIVLIGNKAD 136 + A E +L NK D Sbjct: 146 VLRQAIAERIKPILFMNKMD 165 >5H7K-A nrPDB Length = 397 Score = 34.1 bits (77), Expect = 0.053, Method: Composition-based stats. Identities = 21/93 (22%), Positives = 32/93 (34%), Gaps = 6/93 (6%) Query: 64 KAFKVHLQLWDTAGQERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVRNWMSQLQANAYC 123 + + L DT G F T R G +++ D + V + A Sbjct: 87 EGKDYLINLIDTPGHVDFGGDVTRAMRAIDGVIIVVD-----AVEGVMPQTETVVRQALR 141 Query: 124 ENPDIVLIGNKAD-LPDQREVNERQARELADKY 155 E VL NK D L + ++ +Q E K Sbjct: 142 EYVKPVLFINKVDRLIRELKLTPQQMMERFSKI 174 >2VNE-A nrPDB Length = 201 Score = 33.7 bits (76), Expect = 0.054, Method: Composition-based stats. Identities = 9/30 (30%), Positives = 14/30 (46%), Gaps = 1/30 (3%) Query: 11 KLLALGDSGVGKTTFLYRYTDNKFNPKFIT 40 KL +GD GVG T + +F ++ Sbjct: 67 KLEIIGDGGVG-TILDMTFVPGEFPHEYKE 95 >5NON-A nrPDB Length = 165 Score = 33.7 bits (76), Expect = 0.057, Method: Composition-based stats. Identities = 9/30 (30%), Positives = 14/30 (46%), Gaps = 1/30 (3%) Query: 11 KLLALGDSGVGKTTFLYRYTDNKFNPKFIT 40 KL +GD GVG T + +F ++ Sbjct: 51 KLEIIGDGGVG-TILDMTFVPGEFPHEYKE 79 >2WJI-A nrPDB Length = 165 Score = 33.7 bits (76), Expect = 0.063, Method: Composition-based stats. Identities = 26/164 (15%), Positives = 49/164 (29%), Gaps = 12/164 (7%) Query: 10 IKLLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYNAQGPNGSSGKAFKVH 69 ++ +G+ VGK+T T V ++ +E YN + Sbjct: 4 YEIALIGNPNVGKSTIFNALTGENVYIGNWPGVTVEKKEGEFEYNGEKFKVVDLPGVYSL 63 Query: 70 LQLWDTAGQERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVRNWMSQLQANAYCENPDIV 129 TA + + L+ ++ + QL +++ Sbjct: 64 -----TA--NSIDEIIARDYIINEKPDLVVNIVDATALERNLYLTLQLMEM----GANLL 112 Query: 130 LIGNKADLPDQREVNERQARELADKYGIPYFETSAATGQNVEKA 173 L NK DL + +L G+ SAA +E+ Sbjct: 113 LALNKMDLAKSLGIEID-VDKLEKILGVKVVPLSAAKKMGIEEL 155 >1YE8-A nrPDB Length = 178 Score = 33.3 bits (75), Expect = 0.075, Method: Composition-based stats. Identities = 8/22 (36%), Positives = 15/22 (68%) Query: 10 IKLLALGDSGVGKTTFLYRYTD 31 +K++ G+ GVGKTT + + + Sbjct: 1 MKIIITGEPGVGKTTLVKKIVE 22 >5LZT-jj nrPDB Length = 637 Score = 33.3 bits (75), Expect = 0.080, Method: Composition-based stats. Identities = 27/197 (13%), Positives = 53/197 (26%), Gaps = 34/197 (17%) Query: 10 IKLLALGDSGVGKTTF------LYRYTDNKFNPKFI-TTVGIDFREKRVVYNAQGPNGSS 62 + ++ +G GK+T L D + K+ + + + Sbjct: 213 VNVVFIGHVDAGKSTIGGQIMYLTGMVDKRTLEKYEREAKEKNRETWYLSWALDTNQEER 272 Query: 63 GKAFKV------------HLQLWDTAGQERFRSLTTAFFRDAMGFLLMFDLTSQQ---SF 107 K V H + D G + F A +L+ + F Sbjct: 273 DKGKTVEVGRAYFETEKKHFTILDAPGHKSFVPNMIGGASQADLAVLVISARKGEFETGF 332 Query: 108 LNVRNWMSQLQANAYCENPDIVLIGNKADLP------------DQREVNERQARELADKY 155 ++++ NK D P ++ V + K Sbjct: 333 EKGGQTREHAMLAKTAGVKHLIVLINKMDDPTVNWSNERYEECKEKLVPFLKKVGFNPKK 392 Query: 156 GIPYFETSAATGQNVEK 172 I + S TG N+++ Sbjct: 393 DIHFMPCSGLTGANLKE 409 >3PEN-A nrPDB Length = 403 Score = 33.3 bits (75), Expect = 0.083, Method: Composition-based stats. Identities = 34/186 (18%), Positives = 62/186 (33%), Gaps = 24/186 (12%) Query: 14 ALGDSGVGKTTFLYRYTDNKFNPK--FITT-VGI-DFREKRVVYNAQGPNGSSGKAFKVH 69 +G GKTT + T + K + T +G+ + +K Y + S G + Sbjct: 13 VVGHVDHGKTTLVQAITGIWTSKKLGYAETNIGVCESCKKPEAYVTEPSCKSCGSDDEPK 72 Query: 70 L----QLWDTAGQERFRSLTTAFFRDA--MGFLLMFDLTSQQSFLNVRNWMSQLQANAYC 123 D G E + T A G +L+ F A Sbjct: 73 FLRRISFIDAPGHEVL--MATMLSGAALMDGAILVVAANEP--FPQ-PQTREHFVALGII 127 Query: 124 ENPDIVLIGNKAD-------LPDQREVNERQARELADKYGIPYFETSAATGQNVEKAVET 176 +++++ NK D L R++ + A+ +P SA N++ +E Sbjct: 128 GVKNLIIVQNKVDVVSKEEALSQYRQIKQFTKGTWAE--NVPIIPVSALHKINIDSLIEG 185 Query: 177 LLDLIM 182 + + I Sbjct: 186 IEEYIK 191 >2YV5-A nrPDB Length = 302 Score = 33.3 bits (75), Expect = 0.090, Method: Composition-based stats. Identities = 13/40 (32%), Positives = 20/40 (50%), Gaps = 2/40 (5%) Query: 3 DGDYDYL--IKLLALGDSGVGKTTFLYRYTDNKFNPKFIT 40 D DYL + G SGVGK++ L R T + + ++ Sbjct: 157 DELVDYLEGFICILAGPSGVGKSSILSRLTGEELRTQEVS 196 Score = 27.9 bits (61), Expect = 3.2, Method: Composition-based stats. Identities = 16/72 (22%), Positives = 31/72 (43%), Gaps = 3/72 (4%) Query: 107 FLNVRNWMSQLQANAYCENPDIVLIGNKADLPDQREVNER-QARELADKYGIPYFETSAA 165 F N + + + V++ NK DL ++ E E + + G + SA Sbjct: 94 FNN--YLLDNMLVVYEYFKVEPVIVFNKIDLLNEEEKKELERWISIYRDAGYDVLKVSAK 151 Query: 166 TGQNVEKAVETL 177 TG+ +++ V+ L Sbjct: 152 TGEGIDELVDYL 163 >5LZY-jj nrPDB Length = 710 Score = 32.9 bits (74), Expect = 0.097, Method: Composition-based stats. Identities = 29/196 (14%), Positives = 57/196 (29%), Gaps = 33/196 (16%) Query: 7 DYLIKLLALGDSGVGKTTF----------LYRYTDNKFNPKFITTVGIDFREKRVVYNAQ 56 L+ L+ +G GK+T + + T +K+ + F V + Sbjct: 284 KQLLNLVVIGHVDAGKSTLMGHMLYLLGNINKRTMHKYEQESKKAGKASFAYAWV-LDET 342 Query: 57 GPNGSSGKAFKV----------HLQLWDTAGQERFRSLTTAFFRDAMGFLLMFDLTSQQ- 105 G G V + L D G + F A +L+ D + + Sbjct: 343 GEERERGVTMDVGMTKFETTTKVITLMDAPGHKDFIPNMITGAAQADVAVLVVDASRGEF 402 Query: 106 --SFLNVRNWMSQLQANAYCENPDIVLIGNKAD-----LPDQREVNERQA----RELADK 154 F + + NK D +E+ + + + Sbjct: 403 EAGFETGGQTREHGLLVRSLGVTQLAVAVNKMDQVNWQQERFQEITGKLGHFLKQAGFKE 462 Query: 155 YGIPYFETSAATGQNV 170 + + TS +G+N+ Sbjct: 463 SDVGFIPTSGLSGENL 478 >2P8Y-T nrPDB Length = 842 Score = 32.9 bits (74), Expect = 0.11, Method: Composition-based stats. Identities = 36/185 (19%), Positives = 65/185 (35%), Gaps = 41/185 (22%) Query: 21 GKTTFL-----------------YRYTDNKFNPK-----FITTVGIDFREKRVVYNAQGP 58 GK+T R+TD + + + +T + E + Sbjct: 31 GKSTLTDSLVQRAGIISAAKAGEARFTDTRKDEQERGITIKSTAISLYSEMSDEDVKEIK 90 Query: 59 NGSSGKAFKVHLQLWDTAGQERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVRNWMSQLQ 118 + G +F ++L D+ G F S TA R G L++ D + V + Sbjct: 91 QKTDGNSFLINL--IDSPGHVDFSSEVTAALRVTDGALVVVD-----TIEGVCVQTETVL 143 Query: 119 ANAYCENPDIVLIGNKADLP-DQREVNERQARELADKYGIPYFETSAATGQNVEKAVETL 177 A E V++ NK D + +V++ ++T A T ++V V T Sbjct: 144 RQALGERIKPVVVINKVDRALLELQVSKED-----------LYQTFARTVESVNVIVSTY 192 Query: 178 LDLIM 182 D ++ Sbjct: 193 ADEVL 197 >2YYZ-A nrPDB Length = 359 Score = 32.6 bits (73), Expect = 0.12, Method: Composition-based stats. Identities = 14/56 (25%), Positives = 21/56 (37%), Gaps = 5/56 (8%) Query: 12 LLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYNAQGPNGSSGKAFK 67 + LG SG GKTT L + T G + + +V + G F+ Sbjct: 32 VALLGPSGCGKTTTLLMLAG-----IYKPTSGEIYFDDVLVNDIPPKYREVGMVFQ 82 >4D61-i nrPDB Length = 426 Score = 32.6 bits (73), Expect = 0.13, Method: Composition-based stats. Identities = 27/197 (13%), Positives = 53/197 (26%), Gaps = 34/197 (17%) Query: 10 IKLLALGDSGVGKTTF------LYRYTDNKFNPKFI-TTVGIDFREKRVVYNAQGPNGSS 62 + ++ +G GK+T L D + K+ + + + Sbjct: 4 VNVVFIGHVDAGKSTIGGQIMYLTGMVDKRTLEKYEREAKEKNRETWYLSWALDTNQEER 63 Query: 63 GKAFKV------------HLQLWDTAGQERFRSLTTAFFRDAMGFLLMFDLTSQQ---SF 107 K V H + D G + F A +L+ + F Sbjct: 64 DKGKTVEVGRAYFETEKKHFTILDAPGHKSFVPNMIGGASQADLAVLVISARKGEFETGF 123 Query: 108 LNVRNWMSQLQANAYCENPDIVLIGNKADLP------------DQREVNERQARELADKY 155 ++++ NK D P ++ V + K Sbjct: 124 EKGGQTREHAMLAKTAGVKHLIVLINKMDDPTVNWSNERYEECKEKLVPFLKKVGFNPKK 183 Query: 156 GIPYFETSAATGQNVEK 172 I + S TG N+++ Sbjct: 184 DIHFMPCSGLTGANLKE 200 >6CS8-A nrPDB Length = 303 Score = 32.6 bits (73), Expect = 0.14, Method: Composition-based stats. Identities = 29/149 (19%), Positives = 46/149 (30%), Gaps = 46/149 (30%) Query: 12 LLALGDSGVGKTTFLYRYTD--NKFNPKFITTVGIDFREKRVVYNAQGPNGSSGKAFKVH 69 +L +G +GVGKTT + + + + G FR V Sbjct: 102 ILMVGVNGVGKTTTIGKLARQFEQQGKSVMLAAGDTFRAAAVE----------------Q 145 Query: 70 LQLWDTAGQ-ERFRSLTTAFFRDAMGFLLMFD-------------LTSQQ-SFLNVRNWM 114 LQ+W GQ + A ++FD + N + M Sbjct: 146 LQVW---GQRNNIPVIAQH--TGADSASVIFDAIQAAKARNIDVLIADTAGRLQNKSHLM 200 Query: 115 SQLQANAYCENPDIVLIGNKADLPDQREV 143 +L+ IV + K D+ EV Sbjct: 201 EELKK--------IVRVMKKLDVEAPHEV 221 >1OXV-A nrPDB Length = 353 Score = 32.2 bits (72), Expect = 0.16, Method: Composition-based stats. Identities = 15/60 (25%), Positives = 23/60 (38%), Gaps = 4/60 (6%) Query: 14 ALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYNAQGPNGSSGKAFKVHLQLW 73 LG SG GKTTF+ +T + F ++ V N + + + Q W Sbjct: 36 ILGPSGAGKTTFMRIIA----GLDVPSTGELYFDDRLVASNGKLIVPPEDRKIGMVFQTW 91 >6MTD-v nrPDB Length = 839 Score = 32.2 bits (72), Expect = 0.17, Method: Composition-based stats. Identities = 27/120 (22%), Positives = 36/120 (30%), Gaps = 11/120 (9%) Query: 21 GKTTFLYRYTDNKFNPKFITTVGID----FREKRVVYNAQGPNGSSGKAFKVHLQLWDTA 76 GK+T T+ F E + N S + L D+ Sbjct: 30 GKSTLTDSLVCKAGIIARCITIKSTAISLFYE--LSENDLNFIKQSKDGAGFLINLIDSP 87 Query: 77 GQERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVRNWMSQLQANAYCENPDIVLIGNKAD 136 G F S TA R G L++ D S + A E VL+ NK D Sbjct: 88 GHVDFSSEVTAALRVTDGALVVVDCVSGVCVQT-----ETVLRQAIAERIKPVLMMNKMD 142 >1HEY-A nrPDB Length = 128 Score = 32.2 bits (72), Expect = 0.17, Method: Composition-based stats. Identities = 13/43 (30%), Positives = 19/43 (44%) Query: 7 DYLIKLLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREK 49 D +K L +G+ G GK+T + FN G+D K Sbjct: 2 DKELKFLVVGNGGTGKSTVRNLLKELGFNNVEDAEDGVDALNK 44 >1PUJ-A nrPDB Length = 282 Score = 32.2 bits (72), Expect = 0.18, Method: Composition-based stats. Identities = 17/76 (22%), Positives = 25/76 (32%), Gaps = 14/76 (18%) Query: 2 TDGDYDYLIKLLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYNAQGPNGS 61 G I+ L +G VGK+T + R GI ++ V + Sbjct: 113 AKGVKPRAIRALIIGIPNVGKSTLINRLAKKNIAKTGDR-PGITTSQQWVKVGKE----- 166 Query: 62 SGKAFKVHLQLWDTAG 77 L+L DT G Sbjct: 167 --------LELLDTPG 174 >5W7Q-A nrPDB Length = 373 Score = 32.2 bits (72), Expect = 0.18, Method: Composition-based stats. Identities = 24/113 (21%), Positives = 39/113 (34%), Gaps = 15/113 (13%) Query: 93 MGFLLMFDLTSQQSFLNVRNWMSQLQANAYCENPDIVLIGNKADL---PDQREVNERQAR 149 G +L+ + + P IV+ NK D+ + E+ E + R Sbjct: 93 DGAILVVSAADGP----MPQTREHILLARQVGVPYIVVFLNKCDMVDDEELLELVEMEVR 148 Query: 150 ELADKY-----GIPYFETSAATGQNVEKAVETLLDLIMKRMEQCVEKTQIPDT 197 EL +Y IP SA +E E D I++ M+ P+ Sbjct: 149 ELLSEYDFPGDDIPIIRGSALKA--LEGDAEW-EDKILELMDAVDSYIPTPER 198 >5GAD-l nrPDB Length = 497 Score = 32.2 bits (72), Expect = 0.19, Method: Composition-based stats. Identities = 29/149 (19%), Positives = 46/149 (30%), Gaps = 46/149 (30%) Query: 12 LLALGDSGVGKTTFLYRYTD--NKFNPKFITTVGIDFREKRVVYNAQGPNGSSGKAFKVH 69 +L +G +GVGKTT + + + + G FR V Sbjct: 296 ILMVGVNGVGKTTTIGKLARQFEQQGKSVMLAAGDTFRAAAVE----------------Q 339 Query: 70 LQLWDTAGQ-ERFRSLTTAFFRDAMGFLLMFD-------------LTSQQ-SFLNVRNWM 114 LQ+W GQ + A ++FD + N + M Sbjct: 340 LQVW---GQRNNIPVIAQH--TGADSASVIFDAIQAAKARNIDVLIADTAGRLQNKSHLM 394 Query: 115 SQLQANAYCENPDIVLIGNKADLPDQREV 143 +L+ IV + K D+ EV Sbjct: 395 EELKK--------IVRVMKKLDVEAPHEV 415 >5B3F-A nrPDB Length = 343 Score = 32.2 bits (72), Expect = 0.20, Method: Composition-based stats. Identities = 11/32 (34%), Positives = 19/32 (59%), Gaps = 1/32 (3%) Query: 14 ALGDSGVGKTTFLYRYTDNKFNPKFITTVGID 45 GDSG GK+TF R + F + ++++ +D Sbjct: 42 VAGDSGSGKSTFT-RAISDIFGEELVSSITVD 72 >2GZA-A nrPDB Length = 361 Score = 31.8 bits (71), Expect = 0.21, Method: Composition-based stats. Identities = 14/75 (18%), Positives = 24/75 (32%), Gaps = 19/75 (25%) Query: 4 GDYDYLIK--------LLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYNA 55 GDY ++ ++ G++G GKTT + I F ++ + Sbjct: 162 GDYMSFLRRAVQLERVIVVAGETGSGKTTLMKALMQ-----------EIPFDQRLITIED 210 Query: 56 QGPNGSSGKAFKVHL 70 VHL Sbjct: 211 VPELFLPDHPNHVHL 225 >5ANB-A nrPDB Length = 398 Score = 31.8 bits (71), Expect = 0.21, Method: Composition-based stats. Identities = 8/42 (19%), Positives = 19/42 (45%) Query: 134 KADLPDQREVNERQARELADKYGIPYFETSAATGQNVEKAVE 175 K L ++ + + R +K + + +TS+ G + + E Sbjct: 341 KRALTLRKSITTQTGRAALEKITLKFIDTSSKFGHGLHQTAE 382 >3LX8-A nrPDB Length = 272 Score = 31.8 bits (71), Expect = 0.24, Method: Composition-based stats. Identities = 27/167 (16%), Positives = 55/167 (32%), Gaps = 13/167 (7%) Query: 12 LLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYNAQGPNGSSGKAFKVHLQ 71 + +G+ GKT+ T + N + G+ K + + Sbjct: 6 IALIGNPNSGKTSLFNLITGH--NQRVGNWPGVTVERKSGLVKKNKDLEIQDLPGIYSMS 63 Query: 72 LWDTAGQERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVRNWMSQLQANAYCENPDIVLI 131 + + +E+ R A L + D T+ + N+ L + + Sbjct: 64 PY--SPEEKVARDYLLSQR-ADSILNVVDATNLER--NLY-----LTTQLIETGIPVTIA 113 Query: 132 GNKADLPDQREVNERQARELADKYGIPYFETSAATGQNVEKAVETLL 178 N D+ D + + +L+ G+P TSA V++ V+ Sbjct: 114 LNMIDVLDG-QGKKINVDKLSYHLGVPVVATSALKQTGVDQVVKKAA 159 >5TY0-A nrPDB Length = 422 Score = 31.8 bits (71), Expect = 0.25, Method: Composition-based stats. Identities = 14/68 (20%), Positives = 22/68 (32%), Gaps = 5/68 (7%) Query: 69 HLQLWDTAGQERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVRNWMSQLQANAYCENPDI 128 + + DT G F R G +++FD S V + A Sbjct: 84 RINIIDTPGHVDFMIEVERSLRVLDGAVVVFD-----SVAGVEPQSETVWRQANKYGVPR 138 Query: 129 VLIGNKAD 136 ++ NK D Sbjct: 139 IVFVNKMD 146 >4TLD-A nrPDB Length = 253 Score = 31.4 bits (70), Expect = 0.28, Method: Composition-based stats. Identities = 19/74 (25%), Positives = 25/74 (33%), Gaps = 7/74 (9%) Query: 13 LALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYNAQGPNGSSGKAFKV---H 69 L G SG GKT F ++ N V + F E + A V Sbjct: 43 LVSGTSGTGKTLFSIQFLYNGIIEFDEPGVFVTFEETPQDIIKNARSFGWDLAKLVDEGK 102 Query: 70 LQLWDTA----GQE 79 L + D + GQE Sbjct: 103 LFILDASPDPEGQE 116 >4J0Q-A nrPDB Length = 433 Score = 31.4 bits (70), Expect = 0.29, Method: Composition-based stats. Identities = 35/182 (19%), Positives = 56/182 (30%), Gaps = 42/182 (23%) Query: 1 MTDGDYDYLIKLLALGDSG-V--GKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYNAQG 57 M +D + + +G G V GKTT T V + +V + Sbjct: 37 MAKEKFDRSLPHVNVGTIGHVDHGKTTLTAALTR----------VCSEVFGSAIVEFDKI 86 Query: 58 PNGSSGKAFKVHLQLWDTAGQERFRSLTTAF---------------FRDA---MGFLLMF 99 + KA + + TA + S + A G +L+ Sbjct: 87 DSAPEEKARGITIN---TA-HVEYNSTIRHYAHVDCPGHADYVKNMITGAAQMDGAILVC 142 Query: 100 DLTSQQSFLNVRNWMSQLQANAYCENPDIVLIGNKADLPDQ---REVNERQARELADKYG 156 + + + P IV+ NKADL D E+ E + R+L Y Sbjct: 143 SAADGP----MPQTREHILLSRQVGVPYIVVFLNKADLVDDAELLELVEMEVRDLLSTYD 198 Query: 157 IP 158 P Sbjct: 199 FP 200 >5TV2-A nrPDB Length = 405 Score = 31.4 bits (70), Expect = 0.29, Method: Composition-based stats. Identities = 23/120 (19%), Positives = 42/120 (35%), Gaps = 15/120 (12%) Query: 69 HLQLWDTAGQERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVRNWMSQLQANAYCENPDI 128 + + DT G F R G +++F +S + W A + Sbjct: 83 RVNIIDTPGHVDFTIEVERSLRVLDGAVVVFCGSSGVEPQSETVWRQ-----ADKYHVPR 137 Query: 129 VLIGNKADLPDQ---REVNERQARELADKYGIPYFETSAATGQNVEKAVETLLDLIMKRM 185 ++ NK D R V++ + R A+ I E+ + ++DLI +M Sbjct: 138 MVFVNKMDRAGADFLRVVDQIKNRLGANPVPIQ-------LNVGAEEDFKGVIDLIKMKM 190 >3S1A-A nrPDB Length = 525 Score = 31.4 bits (70), Expect = 0.31, Method: Composition-based stats. Identities = 19/74 (25%), Positives = 25/74 (33%), Gaps = 7/74 (9%) Query: 13 LALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYNAQGPNGSSGKAFKV---H 69 L G SG GKT F ++ N V + F E + A V Sbjct: 43 LVSGTSGTGKTLFSIQFLYNGIIEFDEPGVFVTFEETPQDIIKNARSFGWDLAKLVDEGK 102 Query: 70 LQLWDTA----GQE 79 L + D + GQE Sbjct: 103 LFILDASPDPEGQE 116 >5IDV-A nrPDB Length = 279 Score = 31.4 bits (70), Expect = 0.34, Method: Composition-based stats. Identities = 9/61 (14%), Positives = 20/61 (32%), Gaps = 3/61 (4%) Query: 12 LLALGDSGVGKTTFLYRYTDNKFNPKFITTVG-IDFREKRVVYNAQGPNGSSGKAFKVHL 70 + +G SG GKT+ + +F + D + + ++ + V Sbjct: 68 VALVGRSGAGKTSLVNMLV--RFQEVSSGQIYLDDLPIRDIELSSLRTQIAMVNQQVVLF 125 Query: 71 Q 71 Sbjct: 126 N 126 >4XGC-D nrPDB Length = 459 Score = 31.4 bits (70), Expect = 0.35, Method: Composition-based stats. Identities = 16/61 (26%), Positives = 24/61 (39%), Gaps = 3/61 (4%) Query: 12 LLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYNAQGPNGSSGKAFKVHLQ 71 LL LG G GKTT + + K G + + N + + K+ V +Q Sbjct: 52 LLLLGPRGSGKTTLINSVLADLLPNKSF---GENTLIVHLDGNLHTDDRVALKSITVQMQ 108 Query: 72 L 72 L Sbjct: 109 L 109 >6NOT-A nrPDB Length = 707 Score = 31.0 bits (69), Expect = 0.37, Method: Composition-based stats. Identities = 33/199 (16%), Positives = 61/199 (30%), Gaps = 23/199 (11%) Query: 20 VGKTTFLYRYT-----DNKFNPKFITTVGIDFREKRVVYNAQGPNGSSGKAFKVH-LQLW 73 GKTT R +K +D+ E+ + ++ ++ + + Sbjct: 29 AGKTTTTERILYYTGKSHKIGEVHEGGATMDWMEQEQERGITITSAATTCRWQDKVINII 88 Query: 74 DTAGQERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVRNWMSQLQANAYCENPDIVLIGN 133 DT G F R G + +FD + + W A N + N Sbjct: 89 DTPGHVDFTIEVERSLRVLDGAVAVFDGVAGVEPQSETVWRQ-----ADKYNVPRMCFVN 143 Query: 134 KADLPDQ---REVNERQARELADKYGIPYFETSAATGQNVEKAVETLLDLIMKRMEQCVE 190 K D R V + R A I +E+ + +++LI +M+ + Sbjct: 144 KMDRMGADFYRCVEMIKDRLGARSLIIQ-------LPIGIEENFKGIVNLI--KMKAVIW 194 Query: 191 KTQIPDTVNGGNSGNLDGE 209 K + D + Sbjct: 195 KDESLGAEYFEEDIPADMQ 213 >4AC9-A nrPDB Length = 482 Score = 31.0 bits (69), Expect = 0.39, Method: Composition-based stats. Identities = 10/55 (18%), Positives = 20/55 (36%), Gaps = 6/55 (10%) Query: 125 NPDIVLIGNKADLPDQREVNERQA------RELADKYGIPYFETSAATGQNVEKA 173 N I+++ K+D E+ + + + SA TG V++ Sbjct: 125 NIPIIVVITKSDNAGTEEIKRTEMIMKSILQSTHNLKNSSIIPISAKTGFGVDEL 179 >4U00-A nrPDB Length = 244 Score = 31.0 bits (69), Expect = 0.40, Method: Composition-based stats. Identities = 14/47 (29%), Positives = 21/47 (44%), Gaps = 15/47 (31%) Query: 11 KLLALGDSGVGKTTFLYRYTDNKFNPKFITTVG--IDFREKRVVYNA 55 KL+ +G SG GK+T + T+ DF+E VV + Sbjct: 32 KLVIIGPSGSGKSTLIR-------------TINRLEDFQEGEVVVDG 65 >6F1T-i nrPDB Length = 492 Score = 31.0 bits (69), Expect = 0.41, Method: Composition-based stats. Identities = 17/121 (14%), Positives = 45/121 (37%), Gaps = 16/121 (13%) Query: 12 LLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYNAQGPNGSSGKAFKVHLQ 71 +L G+ G GKTT + + + K G+++ V + + ++ Sbjct: 57 ILVFGEDGSGKTTLMTKLQGAEHGKKGR---GLEYLYLSV------HDEDRDDHTRCNVW 107 Query: 72 LWD----TAGQERFRSLTTAFFRDAMGFLLMFDLTSQQS-FLNVRNWMSQLQANAYCENP 126 + D G +F +++ + + + D++ + +++ W S L+ + Sbjct: 108 ILDGDLYHKGLLKF-AVSAESLPET-LVIFVADMSRPWTVMESLQKWASVLREHIDKMKI 165 Query: 127 D 127 Sbjct: 166 P 166 >2IYT-A nrPDB Length = 184 Score = 31.0 bits (69), Expect = 0.45, Method: Composition-based stats. Identities = 15/84 (17%), Positives = 29/84 (34%), Gaps = 17/84 (20%) Query: 11 KLLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYNAQGPNGSSGKAFKVHL 70 K + +G G GK+T R +G+ + V + + Sbjct: 4 KAVLVGLPGSGKSTIGRRLAK---------ALGVGLLDTDVAIEQRTGRSIA-------- 46 Query: 71 QLWDTAGQERFRSLTTAFFRDAMG 94 ++ T G++ FR + R A+ Sbjct: 47 DIFATDGEQEFRRIEEDVVRAALA 70 >6G12-A nrPDB Length = 301 Score = 31.0 bits (69), Expect = 0.45, Method: Composition-based stats. Identities = 7/30 (23%), Positives = 13/30 (43%) Query: 2 TDGDYDYLIKLLALGDSGVGKTTFLYRYTD 31 G I+ + +G VGK+T + + Sbjct: 120 AKGLKPRAIRAMIVGIPNVGKSTLINKLAK 149 >5ZLU-EE nrPDB Length = 497 Score = 30.6 bits (68), Expect = 0.47, Method: Composition-based stats. Identities = 8/40 (20%), Positives = 15/40 (37%) Query: 11 KLLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKR 50 K+ G +G GKT+ L ++ I + + Sbjct: 324 KVAITGSNGTGKTSLLKMISERADGLTISPKAEIGYFTQT 363 Score = 30.2 bits (67), Expect = 0.61, Method: Composition-based stats. Identities = 22/104 (21%), Positives = 35/104 (33%), Gaps = 22/104 (21%) Query: 5 DYDYLIKLLALGDSGVGKTTFLYRY---------TDNKFNP-KFITTVGIDFREKRVVYN 54 YD ++ +GD+G GK++ L T +F I+ +G + V Sbjct: 29 SYD---RIGLVGDNGAGKSSLLKVLNGEIVLAEATLQRFGDFAHISQLG-GIEIETVEDR 84 Query: 55 AQGPNGSSGKAFKVHLQLWDT--AGQERFRSLTTAFFRDAMGFL 96 A DT G+E + AF + G L Sbjct: 85 AMLSRLGVSNVQN------DTMSGGEETRAKIAAAFSQQVHGIL 122 >1R5O-A nrPDB Length = 467 Score = 30.6 bits (68), Expect = 0.48, Method: Composition-based stats. Identities = 33/207 (15%), Positives = 68/207 (32%), Gaps = 39/207 (18%) Query: 10 IKLLALGDSGVGKTTF--LYRYTDNKFNPKFITTVGIDFREKRVV-------YNAQGPNG 60 + ++ +G GK+T + + + + + + +E ++ Sbjct: 44 VNIVFIGHVDAGKSTLGGNILFLTGMVDKRTMEKIEREAKEAGKESWYLSWALDSTSEER 103 Query: 61 SSGKAFKV----------HLQLWDTAGQERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNV 110 GK +V L D G + + + A +L+ + F Sbjct: 104 EKGKTVEVGRAYFETEHRRFSLLDAPGHKGYVTNMINGASQADIGVLVIS-ARRGEFEAG 162 Query: 111 RNWMSQLQANAYCENPD----IVLIGNKADLPDQREVNERQARELADKY----------- 155 Q + +A +V++ NK D + +E + +E DK Sbjct: 163 FERGGQTREHAVLARTQGINHLVVVINKMD-EPSVQWSEERYKECVDKLSMFLRRVAGYN 221 Query: 156 ---GIPYFETSAATGQNVEKAVETLLD 179 + Y SA TGQNV+ V++ + Sbjct: 222 SKTDVKYMPVSAYTGQNVKDRVDSSVC 248 >5C78-A nrPDB Length = 564 Score = 30.6 bits (68), Expect = 0.49, Method: Composition-based stats. Identities = 7/16 (43%), Positives = 12/16 (75%) Query: 11 KLLALGDSGVGKTTFL 26 K+ +G+SG GK+T + Sbjct: 377 KIAFIGESGCGKSTLV 392 >2HDN-B nrPDB Length = 335 Score = 30.6 bits (68), Expect = 0.50, Method: Composition-based stats. Identities = 8/45 (17%), Positives = 15/45 (33%), Gaps = 4/45 (8%) Query: 93 MGFLLMFDLTSQQSFLNVRNWMSQLQANAYCENPDIVLIGNKADL 137 G +L+ T + + P I++ NK D+ Sbjct: 41 DGAILVVAATDGP----MPQTREHILLGRQVGVPYIIVFLNKCDM 81 >1EFM-A nrPDB Length = 379 Score = 30.6 bits (68), Expect = 0.50, Method: Composition-based stats. Identities = 8/45 (17%), Positives = 15/45 (33%), Gaps = 4/45 (8%) Query: 93 MGFLLMFDLTSQQSFLNVRNWMSQLQANAYCENPDIVLIGNKADL 137 G +L+ T + + P I++ NK D+ Sbjct: 85 DGAILVVAATDGP----MPQTREHILLGRQVGVPYIIVFLNKCDM 125 >2IT1-A nrPDB Length = 362 Score = 30.6 bits (68), Expect = 0.51, Method: Composition-based stats. Identities = 15/64 (23%), Positives = 23/64 (35%), Gaps = 13/64 (20%) Query: 12 LLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYNAQGPNGSSGKAFKV--H 69 + LG SG GK+T LY + T G ++ ++ + K V Sbjct: 32 MALLGPSGSGKSTLLYTIAG-----IYKPTSG------KIYFDEKDVTELPPKDRNVGLV 80 Query: 70 LQLW 73 Q W Sbjct: 81 FQNW 84 >3CNO-A nrPDB Length = 262 Score = 30.6 bits (68), Expect = 0.52, Method: Composition-based stats. Identities = 7/29 (24%), Positives = 15/29 (51%) Query: 5 DYDYLIKLLALGDSGVGKTTFLYRYTDNK 33 +D L ++L +G GK+T + + + Sbjct: 95 SFDRLARVLIVGVPNTGKSTIINKLKGKR 123 >1WDT-A nrPDB Length = 665 Score = 30.6 bits (68), Expect = 0.53, Method: Composition-based stats. Identities = 22/131 (16%), Positives = 38/131 (29%), Gaps = 11/131 (8%) Query: 12 LLALGDSGVGKTTFLYRYTDNKFNPK-----FITTVGIDFREKRVVYNAQGPNGSSGKAF 66 + +G +G GKTT + T D+ + ++ G + F Sbjct: 12 VALVGHAGSGKTTLTEALLYKTGAKERRGRVEEGTTTTDYTPEAKLHRTTVRTGVAPLLF 71 Query: 67 KVH-LQLWDTAGQERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVRNWMSQLQANAYCEN 125 + H + L D G F A L+ + R W A Sbjct: 72 RGHRVFLLDAPGYGDFVGEIRGALEAADAALVAVSAEAGVQVGTERAW-----TVAERLG 126 Query: 126 PDIVLIGNKAD 136 +++ K D Sbjct: 127 LPRMVVVTKLD 137 >4YMS-J nrPDB Length = 240 Score = 30.6 bits (68), Expect = 0.53, Method: Composition-based stats. Identities = 13/60 (21%), Positives = 22/60 (36%), Gaps = 5/60 (8%) Query: 12 LLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYNAQGPNGSSGKAFKVHLQ 71 ++ +G SG GK+T L N T G F + + N + + + Q Sbjct: 30 VVIIGPSGSGKSTLLR-----CINLLEEPTKGEVFIDGVKINNGKVNINKVRQKVGMVFQ 84 >6HCM-k1 nrPDB Length = 599 Score = 30.6 bits (68), Expect = 0.54, Method: Composition-based stats. Identities = 8/42 (19%), Positives = 22/42 (52%), Gaps = 2/42 (4%) Query: 12 LLALGDSGVGKTTFLYRYTDNKFNPK--FITTVGIDFREKRV 51 ++ LG++G GKTTF+ + + + + ++ +++ Sbjct: 375 MVMLGENGTGKTTFIRMLAGRLKPDEGGEVPVLNVSYKPQKI 416 >3J81-k nrPDB Length = 527 Score = 30.6 bits (68), Expect = 0.55, Method: Composition-based stats. Identities = 14/61 (22%), Positives = 27/61 (44%), Gaps = 9/61 (14%) Query: 128 IVLIGNKADLPDQREVNERQARELADKY-------GIPYFETSAATGQNVEKAVETLLDL 180 ++++ NK DL RE + + ++ K+ G P SA N++ E ++ Sbjct: 244 VIILQNKVDL--MREESALEHQKSILKFIRGTIADGAPIVPISAQLKYNIDAVNEFIVKT 301 Query: 181 I 181 I Sbjct: 302 I 302 >6C2V-A nrPDB Length = 115 Score = 30.6 bits (68), Expect = 0.55, Method: Composition-based stats. Identities = 17/52 (32%), Positives = 22/52 (42%), Gaps = 2/52 (3%) Query: 12 LLALGDSGVGKTTF--LYRYTDNKFNPKFITTVGIDFREKRVVYNAQGPNGS 61 ++ +G SG GKTT L R + I TV KRV A+ N Sbjct: 5 VVIVGPSGAGKTTLDELARKAKEEVPDAEIRTVTTKEDAKRVAEEAERRNAD 56 Score = 27.6 bits (60), Expect = 4.2, Method: Composition-based stats. Identities = 8/38 (21%), Positives = 16/38 (42%), Gaps = 1/38 (2%) Query: 12 LLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREK 49 ++ +G SG GK+T + T+ + E+ Sbjct: 58 VVIVGPSGSGKSTLA-KIVKKIIARAGAKTIEVTTEEE 94 >3JVU-A nrPDB Length = 356 Score = 30.6 bits (68), Expect = 0.58, Method: Composition-based stats. Identities = 22/96 (22%), Positives = 37/96 (38%), Gaps = 13/96 (13%) Query: 114 MSQLQANAYCENPDIVLIGNKADLPDQREVNERQARELADKYGIPY---FETS-AATGQN 169 S+ +A E+PDI+L+G DL R A A+ + + TS A T Sbjct: 185 FSEALRSALREDPDIILVGEMRDLETIR-----LALTAAETGHLVFGTLHTTSAAKTIDR 239 Query: 170 VEKAV----ETLLDLIMKRMEQCVEKTQIPDTVNGG 201 V + ++ ++ Q V + + GG Sbjct: 240 VVDVFPAEEKAMVRSMLSESLQSVISQTLIKKIGGG 275 >3FVQ-A nrPDB Length = 359 Score = 30.2 bits (67), Expect = 0.60, Method: Composition-based stats. Identities = 9/26 (34%), Positives = 11/26 (42%) Query: 12 LLALGDSGVGKTTFLYRYTDNKFNPK 37 L +G SG GKTT L + Sbjct: 33 LFIIGASGCGKTTLLRCLAGFEQPDS 58 >3MMP-A nrPDB Length = 678 Score = 30.2 bits (67), Expect = 0.64, Method: Composition-based stats. Identities = 8/45 (17%), Positives = 15/45 (33%), Gaps = 4/45 (8%) Query: 93 MGFLLMFDLTSQQSFLNVRNWMSQLQANAYCENPDIVLIGNKADL 137 G +L+ T + + P I++ NK D+ Sbjct: 384 DGAILVVAATDGP----MPQTREHILLGRQVGVPYIIVFLNKCDM 424 >1SUL-A nrPDB Length = 195 Score = 30.2 bits (67), Expect = 0.64, Method: Composition-based stats. Identities = 19/128 (14%), Positives = 42/128 (32%), Gaps = 11/128 (8%) Query: 12 LLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYNAQGPNGSSGKAFKVHLQ 71 + G S VGK++F+ + K + + G + N + + Sbjct: 26 IALAGRSNVGKSSFINSLINRKNLARTSSKPGKTQTLNFYIINDELHFVDVPGYGFAKVS 85 Query: 72 LWDTAGQERFRSLTTAFFRDAM---GFLLMFDLTSQQSFLNVRNWMSQLQANAYCENPDI 128 + +E + + + + + DL S +V+ M + + Sbjct: 86 ---KSEREAWGRMIETYITTREELKAVVQIVDLRHAPSNDDVQ--MYEFLKYY---GIPV 137 Query: 129 VLIGNKAD 136 ++I KAD Sbjct: 138 IVIATKAD 145 >6F1Y-j nrPDB Length = 337 Score = 30.2 bits (67), Expect = 0.65, Method: Composition-based stats. Identities = 17/121 (14%), Positives = 45/121 (37%), Gaps = 16/121 (13%) Query: 12 LLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYNAQGPNGSSGKAFKVHLQ 71 +L G+ G GKTT + + + K G+++ V + + ++ Sbjct: 21 ILVFGEDGSGKTTLMTKLQGAEHGKKGR---GLEYLYLSV------HDEDRDDHTRCNVW 71 Query: 72 LWD----TAGQERFRSLTTAFFRDAMGFLLMFDLTSQQS-FLNVRNWMSQLQANAYCENP 126 + D G +F +++ + + + D++ + +++ W S L+ + Sbjct: 72 ILDGDLYHKGLLKF-AVSAESLPET-LVIFVADMSRPWTVMESLQKWASVLREHIDKMKI 129 Query: 127 D 127 Sbjct: 130 P 130 >4FIN-A nrPDB Length = 555 Score = 30.2 bits (67), Expect = 0.72, Method: Composition-based stats. Identities = 8/38 (21%), Positives = 15/38 (39%) Query: 14 ALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRV 51 +G +G GK+T + + T+G + V Sbjct: 354 IIGPNGAGKSTLFRMISGQEQPDSGTITLGETVKLASV 391 Score = 27.6 bits (60), Expect = 4.0, Method: Composition-based stats. Identities = 8/16 (50%), Positives = 11/16 (68%) Query: 11 KLLALGDSGVGKTTFL 26 K+ LG +G GK+T L Sbjct: 34 KIGVLGLNGAGKSTLL 49 >2P5T-B nrPDB Length = 253 Score = 30.2 bits (67), Expect = 0.73, Method: Composition-based stats. Identities = 17/66 (25%), Positives = 22/66 (33%), Gaps = 5/66 (7%) Query: 12 LLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYNAQGPNGSSGKAFKVHLQ 71 +L G SG GKTT +R +F + G FR + Y Sbjct: 35 ILLGGQSGAGKTTI-HRIKQKEFQGNIVIIDGDSFRSQHPHYLELQQEYGKDSVEYTK-- 91 Query: 72 LWDTAG 77 D AG Sbjct: 92 --DFAG 95 >2D62-A nrPDB Length = 375 Score = 29.9 bits (66), Expect = 0.79, Method: Composition-based stats. Identities = 16/59 (27%), Positives = 23/59 (38%), Gaps = 5/59 (8%) Query: 12 LLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYNAQGPNGSSGKAFKVHL 70 L+ LG SG GKTT L + T G + E +V + + K V + Sbjct: 35 LVLLGPSGCGKTTTLRMIAGLE-----EPTRGQIYIEDNLVADPEKGVFVPPKERDVAM 88 >2IW3-A nrPDB Length = 986 Score = 29.9 bits (66), Expect = 0.85, Method: Composition-based stats. Identities = 8/39 (20%), Positives = 18/39 (46%), Gaps = 5/39 (12%) Query: 11 KLLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREK 49 ++ +G +G GK+T + T + + T G + + Sbjct: 701 RIAVIGPNGAGKSTLINVLTG-----ELLPTSGEVYTHE 734 >2W6D-A nrPDB Length = 695 Score = 29.9 bits (66), Expect = 0.87, Method: Composition-based stats. Identities = 23/110 (20%), Positives = 39/110 (35%), Gaps = 10/110 (9%) Query: 2 TDGDYDYLIKLLALGDSGVGKTTFLYRYT-DNKFNPKFIT-----TV---GIDFREKRVV 52 + + +LL LGD GK+TFL +N TV G + + Sbjct: 62 SKNLQQGVFRLLVLGDMKRGKSTFLNALIGENLLPSDVNPCTAVLTVLRYGPEKKVTIHF 121 Query: 53 YNAQGPNGSSGKAFKVHLQLWDTAGQERFRSLTTAFFRDAMGFLLMFDLT 102 + + P + FK + D A ++ F D ++ + LT Sbjct: 122 NDGKSPQQLDFQNFKYKYTI-DPAEAKKLEQEKKQAFPDVDYAVVEYPLT 170 >5D4W-A nrPDB Length = 926 Score = 29.9 bits (66), Expect = 0.88, Method: Composition-based stats. Identities = 7/14 (50%), Positives = 11/14 (78%) Query: 13 LALGDSGVGKTTFL 26 + +G+ GVGKTT + Sbjct: 220 VLIGEPGVGKTTIV 233 >3V9H-A nrPDB Length = 566 Score = 29.9 bits (66), Expect = 0.92, Method: Composition-based stats. Identities = 7/36 (19%), Positives = 16/36 (44%), Gaps = 4/36 (11%) Query: 101 LTSQQSFLNVRNWMSQLQANAYCENPDIVLIGNKAD 136 + +SF ++ W+ +++ +L G K D Sbjct: 394 VIDAKSFARIKKWLEHARSSPSLT----ILAGGKCD 425 >4HI0-E nrPDB Length = 199 Score = 29.9 bits (66), Expect = 0.98, Method: Composition-based stats. Identities = 10/58 (17%), Positives = 26/58 (44%), Gaps = 6/58 (10%) Query: 129 VLIGNKADLPD----QREVNERQARELADKYGIPYFETSAATGQNVEKAVETLLDLIM 182 +L+ NK DL +V ER ++++ + P+ T+ + ++ + + + Sbjct: 141 LLVINKIDLAPYVGADLKVMERDSKKMRGEK--PFIFTNIRAKEGLDDVIAWIKRNAL 196 >2OUK-A nrPDB Length = 263 Score = 29.9 bits (66), Expect = 1.00, Method: Composition-based stats. Identities = 14/45 (31%), Positives = 21/45 (46%), Gaps = 1/45 (2%) Query: 12 LLALGDSGVGKTTFLYRY-TDNKFNPKFITTVGIDFREKRVVYNA 55 ++ +G SG GK+TFL F+ I GI+ + K N Sbjct: 53 VVVIGPSGSGKSTFLRCLNLLEDFDEGEIIIDGINLKAKDTNLNK 97 >4HZI-A nrPDB Length = 294 Score = 29.5 bits (65), Expect = 1.0, Method: Composition-based stats. Identities = 16/89 (17%), Positives = 32/89 (35%), Gaps = 15/89 (16%) Query: 12 LLALGDSGVGKTTFLYRY------TDNK---FNPKFITTVGIDFREKRVVYNAQGPNGSS 62 + LG +G GK+T + T F + D R++ + ++ S Sbjct: 63 CVLLGRNGAGKSTLVNLIYGMIWATSGTIRLFQETYGEIAIQDLRKRIGILDSSQQENSI 122 Query: 63 GKAFKVHLQLWDTAGQERFRSLTTAFFRD 91 + V + G F ++ ++RD Sbjct: 123 QRKLTVKDTIL--TGL--FHTI--GYYRD 145 >4ZV4-A nrPDB Length = 405 Score = 29.5 bits (65), Expect = 1.1, Method: Composition-based stats. Identities = 16/69 (23%), Positives = 27/69 (39%), Gaps = 7/69 (10%) Query: 93 MGFLLMFDLTSQQSFLNVRNWMSQLQANAYCENPDIVLIGNKADLPDQ---REVNERQAR 149 G +L+ + + + P IV+ NKAD+ D E+ E + R Sbjct: 100 DGAILVCSAADGP----MPQTREHILLSRQVGVPYIVVFLNKADMVDDAELLELVEMEVR 155 Query: 150 ELADKYGIP 158 +L + Y P Sbjct: 156 DLLNTYDFP 164 >2QAG-B nrPDB Length = 427 Score = 29.5 bits (65), Expect = 1.1, Method: Composition-based stats. Identities = 8/30 (26%), Positives = 18/30 (60%) Query: 8 YLIKLLALGDSGVGKTTFLYRYTDNKFNPK 37 + +L +G++G+GK+T + + KF + Sbjct: 41 FCFNILCVGETGLGKSTLMDTLFNTKFEGE 70 >5W76-A nrPDB Length = 385 Score = 29.5 bits (65), Expect = 1.1, Method: Composition-based stats. Identities = 24/114 (21%), Positives = 38/114 (33%), Gaps = 15/114 (13%) Query: 93 MGFLLMFDLTSQQSFLNVRNWMSQLQANAYCENPDIVLIGNKADL---PDQREVNERQAR 149 G +L+ + + P IV+ NK D+ + E+ E + R Sbjct: 92 DGAILVVSAADGP----MPQTREHILLARQVGVPYIVVFLNKVDMVDDEELLELVEMEVR 147 Query: 150 ELADKY-----GIPYFETSAATGQNVEKAVETLLDLIMKRMEQCVEKTQIPDTV 198 EL Y IP + SA + E + IMK M+ P+ Sbjct: 148 ELLSSYDFPGDDIPIIKGSALKAL---EGDEEGEEAIMKLMDAVDSYIPEPERA 198 >4O0M-A nrPDB Length = 524 Score = 29.5 bits (65), Expect = 1.2, Method: Composition-based stats. Identities = 16/74 (21%), Positives = 24/74 (32%), Gaps = 7/74 (9%) Query: 13 LALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYNAQGPNGSSGKAFKV---H 69 L G SG GKT F ++ N + + F E + + Sbjct: 44 LVSGTSGTGKTLFAVQFLYNGITIFNEPGIFVTFEESPQDIIKNALSFGWNLQSLIDQGK 103 Query: 70 LQLWDTA----GQE 79 L + D + GQE Sbjct: 104 LFILDASPDPDGQE 117 >5MKK-A nrPDB Length = 611 Score = 29.5 bits (65), Expect = 1.2, Method: Composition-based stats. Identities = 7/22 (31%), Positives = 13/22 (59%), Gaps = 3/22 (13%) Query: 11 KLLALGDSGVGKT---TFLYRY 29 K+ +G +G GKT + + R+ Sbjct: 387 KVALVGATGAGKTSVVSLIARF 408 >1WXQ-A nrPDB Length = 397 Score = 29.5 bits (65), Expect = 1.2, Method: Composition-based stats. Identities = 17/70 (24%), Positives = 30/70 (42%), Gaps = 6/70 (8%) Query: 106 SFLNVRNWMSQLQANAYCENPDIVLIGNKADLPDQREVNERQARELADKYGIPYFETSAA 165 S ++ + S+++ N +V+ NKAD ++ E +K G TSAA Sbjct: 199 SQDDLLAFASEIRRV----NKPMVIAANKADAASDEQIKRLVREE--EKRGYIVIPTSAA 252 Query: 166 TGQNVEKAVE 175 + KA + Sbjct: 253 AELTLRKAAK 262 Score = 27.6 bits (60), Expect = 5.0, Method: Composition-based stats. Identities = 19/112 (16%), Positives = 35/112 (31%), Gaps = 19/112 (16%) Query: 10 IKLLALGDSGVGKTTF--LYRYTDNKFNPKFITTVGIDFREKRVVYN----------AQG 57 +++ +G VGK+TF D + TT+ + + + Sbjct: 1 MEIGVVGKPNVGKSTFFSAATLVDVEIANYPFTTIEANVGVTYAITDHPCKELGCSPNPQ 60 Query: 58 PNGSSGKAFKVHLQLWDTAGQ----ERFRSLTTAF---FRDAMGFLLMFDLT 102 + +++ D AG R L F R A + + D T Sbjct: 61 NYEYRNGLALIPVKMVDVAGLVPGAHEGRGLGNKFLDDLRMASALIHVVDAT 112 >5OCH-A nrPDB Length = 612 Score = 29.5 bits (65), Expect = 1.2, Method: Composition-based stats. Identities = 12/59 (20%), Positives = 21/59 (35%), Gaps = 17/59 (28%) Query: 12 LLALGDSGVGKTT---FLYRYTDNKFNPKFITTVGIDFREKRVVYNAQGPNGSSGKAFK 67 + +G SG GKTT L R+ + T G+ V+ + + + Sbjct: 394 VALVGQSGGGKTTVASLLERF--------YDPTAGV------VMLDGRDLRTLDPSWLR 438 >2PJZ-A nrPDB Length = 263 Score = 29.5 bits (65), Expect = 1.2, Method: Composition-based stats. Identities = 16/65 (24%), Positives = 31/65 (47%), Gaps = 3/65 (4%) Query: 11 KLLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYNAQGPNGSSGKAFKVHL 70 K++ LG +G GKTT L R + + I+ E R + N + + +A+++ + Sbjct: 32 KVIILGPNGSGKTTLL-RAISGLLP--YSGNIFINGMEVRKIRNYIRYSTNLPEAYEIGV 88 Query: 71 QLWDT 75 + D Sbjct: 89 TVNDI 93 >3DEF-A nrPDB Length = 262 Score = 29.5 bits (65), Expect = 1.3, Method: Composition-based stats. Identities = 13/69 (18%), Positives = 21/69 (30%), Gaps = 11/69 (15%) Query: 10 IKLLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYNAQGPNGSSGKAFKVH 69 + +L LG GVGK++ + + R P S Sbjct: 37 MTVLVLGKGGVGKSSTVNSLIGEQV-----------VRVSPFQAEGLRPVMVSRTMGGFT 85 Query: 70 LQLWDTAGQ 78 + + DT G Sbjct: 86 INIIDTPGL 94 >1E94-E nrPDB Length = 449 Score = 29.5 bits (65), Expect = 1.3, Method: Composition-based stats. Identities = 13/62 (20%), Positives = 22/62 (35%), Gaps = 2/62 (3%) Query: 12 LLALGDSGVGKTTFLYRYTDNKFNP--KFITTVGIDFREKRVVYNAQGPNGSSGKAFKVH 69 +L +G +GVGKT R P K T + ++ + + V Sbjct: 59 ILMIGPTGVGKTEIARRLAKLANAPFIKVEATKFTEVGYVGKEVDSIIRDLTDAAVKMVR 118 Query: 70 LQ 71 +Q Sbjct: 119 VQ 120 >6N0I-A nrPDB Length = 706 Score = 29.5 bits (65), Expect = 1.3, Method: Composition-based stats. Identities = 22/131 (16%), Positives = 37/131 (28%), Gaps = 19/131 (14%) Query: 20 VGKTT-----FLYRYTDNKFNPKFITTVGIDFR----EKRVVYNAQGPN-----GSSGKA 65 GKTT Y ++K +D+ E+ + + + A Sbjct: 24 AGKTTTTERILFYTGVNHKMGEVHDGAATMDWMAQEQERGITITSAATTAFWQGSTKQFA 83 Query: 66 FKVHLQLWDTAGQERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVRNWMSQLQANAYCEN 125 K + DT G F R G +++F + W A + Sbjct: 84 HKYRFNIIDTPGHVDFTIEVERSLRVLDGAVVVFSGADGVEPQSETVWRQ-----ANKYH 138 Query: 126 PDIVLIGNKAD 136 + NK D Sbjct: 139 VPRLAYINKMD 149 >3LGZ-B nrPDB Length = 293 Score = 29.5 bits (65), Expect = 1.3, Method: Composition-based stats. Identities = 22/129 (17%), Positives = 44/129 (34%), Gaps = 22/129 (17%) Query: 42 VGIDFREKRVVYNAQGPNGSSGKAFKVH--------LQLWDTAGQERFRSLTTAFFRDAM 93 VG DF +R+ ++ Q +V+ + LW E + ++ FRD M Sbjct: 179 VGEDFENERIYFSKQRLKQYEVDIAEVYQNGVNNHYIDLW-----EYYAAIAEKDFRDVM 233 Query: 94 GFLLMFDLTSQQSFLNVRNWMSQLQANAYCENPDIVLIGNKADLPDQREVNERQARELAD 153 + +F + +Q ++ N L ++ V +R+ +L Sbjct: 234 DQIKVFSIEAQPIIELAARIYIEILDEVRQANYT---------LHERVFVEKRKKAKLFH 284 Query: 154 KYGIPYFET 162 + Y Sbjct: 285 EINSKYHRI 293 >3PXG-A nrPDB Length = 468 Score = 29.1 bits (64), Expect = 1.4, Method: Composition-based stats. Identities = 11/60 (18%), Positives = 22/60 (36%), Gaps = 1/60 (1%) Query: 13 LALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYNAQGPNGSSGKAFKVHLQL 72 + +G+ GVGKT N + + + D R + + + KV ++ Sbjct: 205 VLIGEPGVGKTAIAEGLAQQIINNE-VPEILRDKRVMTLDMGTKYRGEFEDRLKKVMDEI 263 >3PXI-A nrPDB Length = 758 Score = 29.1 bits (64), Expect = 1.5, Method: Composition-based stats. Identities = 11/60 (18%), Positives = 22/60 (36%), Gaps = 1/60 (1%) Query: 13 LALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYNAQGPNGSSGKAFKVHLQL 72 + +G+ GVGKT N + + + D R + + + KV ++ Sbjct: 205 VLIGEPGVGKTAIAEGLAQQIINNE-VPEILRDKRVMTLDMGTKYRGEFEDRLKKVMDEI 263 >2RGK-A nrPDB Length = 421 Score = 29.1 bits (64), Expect = 1.5, Method: Composition-based stats. Identities = 13/54 (24%), Positives = 22/54 (40%), Gaps = 9/54 (16%) Query: 70 LQLWDTAGQ--ERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVRNWMSQLQANA 121 L+ WD A E +R A FL+++D+T + W+ + A Sbjct: 155 LESWDEAFSKTEEYRG-GNANMHAVEAFLIVYDVTHD------KKWLDRAIRVA 201 >3B5X-A nrPDB Length = 582 Score = 29.1 bits (64), Expect = 1.6, Method: Composition-based stats. Identities = 34/197 (17%), Positives = 59/197 (29%), Gaps = 27/197 (13%) Query: 12 LLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYNAQGPNGSSGKAFKVHLQ 71 + +G SG GK+T + T D + + + H Sbjct: 372 VALVGRSGSGKSTIANLF-----------TRFYDVDSGSICLDGHDVRDYKLTNLRRHFA 420 Query: 72 LWDTAGQERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVRNWMSQLQANAYCENPDIVL- 130 L S F D + + + + + + Q A + EN L Sbjct: 421 LV---------SQNVHLFNDTIANNIAYAAEGEYTREQIEQAARQAHAMEFIENMPQGLD 471 Query: 131 --IG-NKADLPDQREVNERQARELADKYGIPYFE--TSAATGQNVEKAVETLLDLIMKRM 185 IG N L + AR L + + TSA ++ E+A++ LD + K Sbjct: 472 TVIGENGTSLSGGQRQRVAIARALLRDAPVLILDEATSALDTES-ERAIQAALDELQKNK 530 Query: 186 EQCVEKTQIPDTVNGGN 202 V ++ Sbjct: 531 TVLVIAHRLSTIEQADE 547 >2PX0-A nrPDB Length = 296 Score = 29.1 bits (64), Expect = 1.6, Method: Composition-based stats. Identities = 10/40 (25%), Positives = 15/40 (37%) Query: 12 LLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRV 51 ++ G +G GKTT L + K I R+ Sbjct: 108 IVLFGSTGAGKTTTLAKLAAISMLEKHKKIAFITTDTYRI 147 >6QUZ-B nrPDB Length = 599 Score = 29.1 bits (64), Expect = 1.6, Method: Composition-based stats. Identities = 9/22 (40%), Positives = 13/22 (59%), Gaps = 3/22 (13%) Query: 11 KLLALGDSGVGKTT---FLYRY 29 K+ +G +G GKTT L R+ Sbjct: 383 KVALVGPTGSGKTTIVNLLMRF 404 >3PV0-A nrPDB Length = 381 Score = 29.1 bits (64), Expect = 1.7, Method: Composition-based stats. Identities = 7/20 (35%), Positives = 11/20 (55%) Query: 12 LLALGDSGVGKTTFLYRYTD 31 ++ +G SG GK+T L Sbjct: 32 VVFVGPSGCGKSTLLRMIAG 51 >5OFO-C nrPDB Length = 871 Score = 29.1 bits (64), Expect = 1.7, Method: Composition-based stats. Identities = 7/28 (25%), Positives = 13/28 (46%), Gaps = 4/28 (14%) Query: 13 LALGDSGVGKTTFL----YRYTDNKFNP 36 + +G+ GVGKT + R + + Sbjct: 207 VLIGEPGVGKTAIVEGLAQRIINGEVPE 234 >4YPL-A nrPDB Length = 555 Score = 29.1 bits (64), Expect = 1.7, Method: Composition-based stats. Identities = 10/27 (37%), Positives = 16/27 (59%), Gaps = 3/27 (11%) Query: 12 LLALGDSGVGKTTF---LYRYTDNKFN 35 L+ +G GVGKT+ + R + KF+ Sbjct: 113 LVLVGPPGVGKTSLGRSIARSMNRKFH 139 >6EMW-E nrPDB Length = 181 Score = 29.1 bits (64), Expect = 1.7, Method: Composition-based stats. Identities = 8/30 (26%), Positives = 13/30 (43%) Query: 13 LALGDSGVGKTTFLYRYTDNKFNPKFITTV 42 + +G+ GVGKT N + T+ Sbjct: 44 VLIGEPGVGKTAIAEGLAQAIVNNEVPETL 73 >2QU8-A nrPDB Length = 228 Score = 29.1 bits (64), Expect = 1.7, Method: Composition-based stats. Identities = 33/209 (15%), Positives = 70/209 (33%), Gaps = 30/209 (14%) Query: 12 LLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYNAQGPNGSSGKAFKVHLQ 71 ++ G VGK++F+ + + + + + Q Sbjct: 32 IILSGAPNVGKSSFMNIVSR------------ANVDVQSYSFTTKNLYVGHFDHKLNKYQ 79 Query: 72 LWDTAGQER--FRSLTTAFFRDAMG-------FLLMFDLTSQQSFLNVRNWMSQLQANAY 122 + DT G F + T L + D+ S+Q L ++ ++ + Sbjct: 80 IIDTPGLLDRAFENRNTIEMTTITALAHINGVILFIIDI-SEQCGLTIKEQINLFYSIKS 138 Query: 123 CENPDIVLIG-NKADLPDQREVNERQARELADKYG-----IPYFETSAATGQNVEKAVET 176 + ++IG NK D + ++ + I + S TG VE+A T Sbjct: 139 VFSNKSIVIGFNKIDKCNMDSLSIDNKLLIKQILDNVKNPIKFSSFSTLTGVGVEQAKIT 198 Query: 177 LLDLIMKRMEQCV--EKTQIPDTVNGGNS 203 +L+ + + ++ Q+ +T G Sbjct: 199 ACELLKNDQAESILLDQEQLLNTKLGETK 227 >4MRS-A nrPDB Length = 614 Score = 28.7 bits (63), Expect = 1.7, Method: Composition-based stats. Identities = 8/22 (36%), Positives = 14/22 (63%), Gaps = 3/22 (13%) Query: 11 KLLALGDSGVGKTT---FLYRY 29 ++ +G SG GK+T L+R+ Sbjct: 389 RVAIVGPSGAGKSTIARLLFRF 410 >4CIU-A nrPDB Length = 727 Score = 28.7 bits (63), Expect = 1.7, Method: Composition-based stats. Identities = 7/28 (25%), Positives = 13/28 (46%), Gaps = 4/28 (14%) Query: 13 LALGDSGVGKTTFL----YRYTDNKFNP 36 + +G+ GVGKT + R + + Sbjct: 61 VLIGEPGVGKTAIVEGLAQRIINGEVPE 88 >6ED3-A nrPDB Length = 848 Score = 28.7 bits (63), Expect = 1.8, Method: Composition-based stats. Identities = 6/14 (42%), Positives = 10/14 (71%) Query: 13 LALGDSGVGKTTFL 26 + +G+ GVGKT + Sbjct: 203 VLIGEPGVGKTAIV 216 >1QVR-A nrPDB Length = 854 Score = 28.7 bits (63), Expect = 1.8, Method: Composition-based stats. Identities = 6/14 (42%), Positives = 10/14 (71%) Query: 13 LALGDSGVGKTTFL 26 + +G+ GVGKT + Sbjct: 195 VLIGEPGVGKTAIV 208 >4RY2-A nrPDB Length = 730 Score = 28.7 bits (63), Expect = 1.8, Method: Composition-based stats. Identities = 7/20 (35%), Positives = 11/20 (55%) Query: 12 LLALGDSGVGKTTFLYRYTD 31 + +G+SG GKTT + Sbjct: 518 VAIVGESGSGKTTLAKLLMN 537 >2P65-A nrPDB Length = 187 Score = 28.7 bits (63), Expect = 1.8, Method: Composition-based stats. Identities = 8/14 (57%), Positives = 10/14 (71%) Query: 13 LALGDSGVGKTTFL 26 + LGD GVGKT + Sbjct: 47 ILLGDPGVGKTAIV 60 >6EM8-A nrPDB Length = 818 Score = 28.7 bits (63), Expect = 1.8, Method: Composition-based stats. Identities = 8/30 (26%), Positives = 13/30 (43%) Query: 13 LALGDSGVGKTTFLYRYTDNKFNPKFITTV 42 + +G+ GVGKT N + T+ Sbjct: 205 VLIGEPGVGKTAIAEGLAQAIVNNEVPETL 234 >4XGC-E nrPDB Length = 460 Score = 28.7 bits (63), Expect = 1.8, Method: Composition-based stats. Identities = 16/97 (16%), Positives = 35/97 (36%), Gaps = 7/97 (7%) Query: 12 LLALGDSGVGKTTFLYRYTDNKFNPKFITTVG---IDFREKRVVYNAQGPNGSSGKAFKV 68 + G SG GKT + + + T I+ +++ + + + + Sbjct: 37 IYLFGHSGTGKTALTRAFLKECGKRQNVRTAHLNAIECYTTKIMLEILLDSLAPDQGDAL 96 Query: 69 HLQ-LWDTAGQERFRSLTTAFFRDAMGFLLMFDLTSQ 104 + + D Q R ++ T + GFL+ D + Sbjct: 97 KVDNMLDFVEQLRRQAATRV---EDQGFLIAVDNAER 130 >1JBK-A nrPDB Length = 195 Score = 28.7 bits (63), Expect = 1.8, Method: Composition-based stats. Identities = 7/28 (25%), Positives = 13/28 (46%), Gaps = 4/28 (14%) Query: 13 LALGDSGVGKTTFL----YRYTDNKFNP 36 + +G+ GVGKT + R + + Sbjct: 47 VLIGEPGVGKTAIVEGLAQRIINGEVPE 74 >2ZBL-A nrPDB Length = 421 Score = 28.7 bits (63), Expect = 1.9, Method: Composition-based stats. Identities = 13/54 (24%), Positives = 22/54 (40%), Gaps = 9/54 (16%) Query: 70 LQLWDTAGQ--ERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVRNWMSQLQANA 121 L+ WD A E +R A FL+++D+T + W+ + A Sbjct: 155 LESWDEAFSQTEDYRG-GNANMHAVEAFLIVYDVTHD------KKWLDRALRIA 201 >3TR5-A nrPDB Length = 528 Score = 28.7 bits (63), Expect = 2.0, Method: Composition-based stats. Identities = 20/135 (14%), Positives = 34/135 (25%), Gaps = 15/135 (11%) Query: 20 VGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYNAQGPNGSSGKAFKVH---------- 69 GKTT + + T+ + + G + Sbjct: 24 AGKTTLTEKLLLFGGAIQLAGTIKSRKAARHATSDWMELEKQRGISVTTSVMQFPYKDYL 83 Query: 70 LQLWDTAGQERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVRNWMSQLQANAYCENPDIV 129 + L DT G F T L++ D V +L + I+ Sbjct: 84 INLLDTPGHADFTEDTYRTLTAVDSALMVIDAAKG-----VEPRTIKLMEVCRLRHTPIM 138 Query: 130 LIGNKADLPDQREVN 144 NK D + + Sbjct: 139 TFINKMDRDTRPSIE 153 >3ZJC-A nrPDB Length = 305 Score = 28.7 bits (63), Expect = 2.0, Method: Composition-based stats. Identities = 13/100 (13%), Positives = 37/100 (37%), Gaps = 4/100 (4%) Query: 1 MTDGDYDYLIKLLALGDSGVGKTTFLYRYTDNK-FNPKFIT-TVGIDFREKRVVYNAQGP 58 M + + D ++++ +G +G GK+ + F+ + V + ++ + + Sbjct: 6 MAESE-DRSLRIVLVGKTGSGKSATANTILGEEIFDSRIAAQAVTKNCQKASREWQGRDL 64 Query: 59 NGSSGKAFKVHLQLWDTAGQERFRSLTTAFFRDAMGFLLM 98 + DT +E R + ++ +L+ Sbjct: 65 LVVDTPGLFDTKESLDTTCKEISRCIISSC-PGPHAIVLV 103 >1OFI-A nrPDB Length = 310 Score = 28.7 bits (63), Expect = 2.0, Method: Composition-based stats. Identities = 8/20 (40%), Positives = 11/20 (55%) Query: 12 LLALGDSGVGKTTFLYRYTD 31 +L +G +GVGKT R Sbjct: 53 ILMIGPTGVGKTEIARRLAK 72 >1R6B-X nrPDB Length = 758 Score = 28.7 bits (63), Expect = 2.0, Method: Composition-based stats. Identities = 8/14 (57%), Positives = 10/14 (71%) Query: 13 LALGDSGVGKTTFL 26 L +G+SGVGKT Sbjct: 211 LLVGESGVGKTAIA 224 >4YPN-A nrPDB Length = 293 Score = 28.7 bits (63), Expect = 2.1, Method: Composition-based stats. Identities = 10/27 (37%), Positives = 16/27 (59%), Gaps = 3/27 (11%) Query: 12 LLALGDSGVGKTTF---LYRYTDNKFN 35 L+ +G GVGKT+ + R + KF+ Sbjct: 146 LVLVGPPGVGKTSLGRSIARSMNRKFH 172 >5MRE-WW nrPDB Length = 401 Score = 28.7 bits (63), Expect = 2.1, Method: Composition-based stats. Identities = 8/18 (44%), Positives = 11/18 (61%) Query: 11 KLLALGDSGVGKTTFLYR 28 K + G+ GVGKT L + Sbjct: 96 KFIITGEPGVGKTVLLSQ 113 >4AYX-A nrPDB Length = 595 Score = 28.7 bits (63), Expect = 2.1, Method: Composition-based stats. Identities = 31/178 (17%), Positives = 57/178 (32%), Gaps = 31/178 (17%) Query: 13 LALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYNAQGPNGSSGKAFKVHLQL 72 +G SG GK+T L + G + + + + + Sbjct: 374 ALVGPSGSGKSTVLSLLLR-----LYDPASG------TISLDGHDIRQLNPVWLRSKIG- 421 Query: 73 WDTAGQERFRSLTTAFFRDAMGFLLMFDLTSQQSF--LNVRNWMSQLQANAYCENPDI-- 128 T QE F ++ + + S ++ A A+ N Sbjct: 422 --TVSQE------PILFSCSIAENIAYGADDPSSVTAEEIQRVAEVANAVAFIRNFPQGF 473 Query: 129 -VLIGNK-ADLPDQREVNERQARELADKYGIPYFE--TSAATGQN---VEKAVETLLD 179 ++G K L ++ AR L I + TSA +N V++A++ L+D Sbjct: 474 NTVVGEKGVLLSGGQKQRIAIARALLKNPKILLLDEATSALDAENEYLVQEALDRLMD 531 >1IM2-A nrPDB Length = 444 Score = 28.7 bits (63), Expect = 2.1, Method: Composition-based stats. Identities = 8/20 (40%), Positives = 11/20 (55%) Query: 12 LLALGDSGVGKTTFLYRYTD 31 +L +G +GVGKT R Sbjct: 53 ILMIGPTGVGKTEIARRLAK 72 >5IK2-D nrPDB Length = 462 Score = 28.7 bits (63), Expect = 2.2, Method: Composition-based stats. Identities = 12/51 (23%), Positives = 18/51 (35%) Query: 5 DYDYLIKLLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYNA 55 Y K+ G +GVGKT + +N +V E+ N Sbjct: 140 PYAKGGKIGLFGGAGVGKTVLIQELINNVAQEHGGLSVFAGVGERTREGND 190 >4N1A-A nrPDB Length = 589 Score = 28.7 bits (63), Expect = 2.2, Method: Composition-based stats. Identities = 19/105 (18%), Positives = 36/105 (34%), Gaps = 20/105 (19%) Query: 13 LALGDSGVGKTTFLYRYTDNKFNPKFITT----VGIDFREKRVVY-NAQGPNGSSGKAFK 67 L GD+ GK+ L R ++ + ID+ + + G + + Sbjct: 387 LVFGDTECGKSNLL-RLITAGIIERYTPQQARLIFIDYSRSLLDVATTEHQIGYAASSTA 445 Query: 68 VHLQLWDTAGQ------------ERFRSLTTAFFRDAMGFLLMFD 100 + D G E+ RS +++ A FL++ D Sbjct: 446 ASSLVRDIKGAMEARLPPPDLTPEQLRS--RSWWTGAELFLVVDD 488 >6FOC-D nrPDB Length = 475 Score = 28.7 bits (63), Expect = 2.2, Method: Composition-based stats. Identities = 20/72 (27%), Positives = 26/72 (36%), Gaps = 11/72 (15%) Query: 11 KLLALGDSGVGKTTFLYRYTDNKFNPKFITT-VGIDFREKRVVYNAQGPNGSSGKAFKVH 69 K+ G +GVGKT L + N+ F T V E+ N + K Sbjct: 155 KIALFGGAGVGKT-VLIQEMINRIARNFGGTSVFAGVGERTREGNDLWVELADANVLK-- 211 Query: 70 LQLWDTA---GQ 78 DTA GQ Sbjct: 212 ----DTALVFGQ 219 >5JWO-A nrPDB Length = 247 Score = 28.7 bits (63), Expect = 2.2, Method: Composition-based stats. Identities = 16/74 (21%), Positives = 24/74 (32%), Gaps = 7/74 (9%) Query: 13 LALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYNAQGPNGSSGKAFKV---H 69 L G SG GKT F ++ N + + F E + + Sbjct: 36 LVSGTSGTGKTLFAVQFLYNGITIFNEPGIFVTFEESPQDIIKNALSFGWNLQSLIDQGK 95 Query: 70 LQLWDTA----GQE 79 L + D + GQE Sbjct: 96 LFILDASPDPDGQE 109 >4HSE-A nrPDB Length = 397 Score = 28.7 bits (63), Expect = 2.3, Method: Composition-based stats. Identities = 6/14 (42%), Positives = 10/14 (71%) Query: 13 LALGDSGVGKTTFL 26 + +G+ GVGKT + Sbjct: 58 VLIGEPGVGKTAIV 71 >6H7G-A nrPDB Length = 346 Score = 28.3 bits (62), Expect = 2.3, Method: Composition-based stats. Identities = 11/24 (45%), Positives = 15/24 (62%), Gaps = 3/24 (12%) Query: 11 KLLALG---DSGVGKTTFLYRYTD 31 K + +G DSG GK+TF+ R T Sbjct: 6 KTVVIGLAADSGCGKSTFMRRMTS 29 >3GD7-A nrPDB Length = 390 Score = 28.3 bits (62), Expect = 2.3, Method: Composition-based stats. Identities = 9/42 (21%), Positives = 17/42 (40%) Query: 11 KLLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVV 52 ++ LG +G GK+T L + I G+ + + Sbjct: 49 RVGLLGRTGSGKSTLLSAFLRLLNTEGEIQIDGVSWDSITLE 90 >2GA8-A nrPDB Length = 359 Score = 28.3 bits (62), Expect = 2.3, Method: Composition-based stats. Identities = 9/47 (19%), Positives = 19/47 (40%), Gaps = 6/47 (12%) Query: 12 LLALGDSGVGKTTFLYRYTD------NKFNPKFITTVGIDFREKRVV 52 ++ +G G GK+T + F + + ++ R K +V Sbjct: 27 VILVGSPGSGKSTIAEELCQIINEKYHTFLSEHPNVIEVNDRLKPMV 73 >4Q7L-A nrPDB Length = 256 Score = 28.3 bits (62), Expect = 2.4, Method: Composition-based stats. Identities = 9/22 (40%), Positives = 13/22 (59%), Gaps = 3/22 (13%) Query: 11 KLLALGDSGVGKTT---FLYRY 29 K+ +G +G GKTT L R+ Sbjct: 33 KVALVGPTGSGKTTIVNLLMRF 54 >2DBY-A nrPDB Length = 368 Score = 28.3 bits (62), Expect = 2.4, Method: Composition-based stats. Identities = 12/74 (16%), Positives = 20/74 (27%), Gaps = 9/74 (12%) Query: 14 ALGDSGVGKTTFLYRYTD-NKFNPKF-ITTVGIDFREKRVVYN-------AQGPNGSSGK 64 +G VGK+T T N + T+ + + Sbjct: 6 IVGLPNVGKSTLFNALTRANALAANYPFATIDKNVGVVPLEDERLYALQRTFAKGERVPP 65 Query: 65 AFKVHLQLWDTAGQ 78 H++ D AG Sbjct: 66 VVPTHVEFVDIAGL 79 >6HA8-V nrPDB Length = 548 Score = 28.3 bits (62), Expect = 2.5, Method: Composition-based stats. Identities = 8/17 (47%), Positives = 11/17 (64%) Query: 11 KLLALGDSGVGKTTFLY 27 K+ +G +G GKTT L Sbjct: 325 KVAIIGPNGSGKTTLLN 341 >5ZXD-A nrPDB Length = 546 Score = 28.3 bits (62), Expect = 2.6, Method: Composition-based stats. Identities = 23/119 (19%), Positives = 39/119 (32%), Gaps = 15/119 (12%) Query: 14 ALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYNAQGPNGSSGKAFKVHLQLW 73 +G +G GKTT L + + + + E+ VV + + +A L+L Sbjct: 35 LVGPNGKGKTTLLKHIANRALS--IPPNIDVLLCEQEVVADETPAVQAVLRADTKRLKL- 91 Query: 74 DTAGQERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVRNWMSQLQANAYCENPDIVLIG 132 E R L + D T+ + V + A A +L G Sbjct: 92 ----LEEERRLQGQLEQG--------DDTAAERLEKVYEELRATGAAAAEAKARRILAG 138 >5B57-C nrPDB Length = 273 Score = 28.3 bits (62), Expect = 2.6, Method: Composition-based stats. Identities = 7/19 (36%), Positives = 10/19 (52%) Query: 13 LALGDSGVGKTTFLYRYTD 31 LG +G GK+T L + Sbjct: 31 ALLGRNGAGKSTLLKTFAG 49 >1WTH-A nrPDB Length = 584 Score = 28.3 bits (62), Expect = 2.7, Method: Composition-based stats. Identities = 13/42 (30%), Positives = 21/42 (50%), Gaps = 1/42 (2%) Query: 46 FREKRVVYNAQGPNGSSGKAFKVHLQLWD-TAGQERFRSLTT 86 F+E Y + P + + H+Q +D T GQER+R + Sbjct: 376 FKEPVSSYKGEYPYVHTMETESGHIQEFDDTPGQERYRLVHP 417 >2NQL-A nrPDB Length = 388 Score = 28.3 bits (62), Expect = 2.7, Method: Composition-based stats. Identities = 9/43 (20%), Positives = 13/43 (30%) Query: 53 YNAQGPNGSSGKAFKVHLQLWDTAGQERFRSLTTAFFRDAMGF 95 + + LWD AGQE +S+ F Sbjct: 111 VRGYTGGFYVDALAALDIALWDIAGQEAGKSIRDLLGGGVDSF 153 >3VAA-A nrPDB Length = 199 Score = 28.3 bits (62), Expect = 2.8, Method: Composition-based stats. Identities = 14/61 (22%), Positives = 22/61 (36%), Gaps = 13/61 (21%) Query: 2 TDGDYDY---LIKLLALGDSGVGKTTFLYRYTDNK----------FNPKFITTVGIDFRE 48 T+ Y ++++ G G GKTT + +F TVG F E Sbjct: 15 TENLYFQSNAMVRIFLTGYMGAGKTTLGKAFARKLNVPFIDLDWYIEERFHKTVGELFTE 74 Query: 49 K 49 + Sbjct: 75 R 75 >4MYH-A nrPDB Length = 598 Score = 28.3 bits (62), Expect = 2.9, Method: Composition-based stats. Identities = 8/17 (47%), Positives = 10/17 (58%) Query: 11 KLLALGDSGVGKTTFLY 27 K +G SG GK+T L Sbjct: 367 KTAIVGSSGSGKSTILK 383 >5T5H-f nrPDB Length = 397 Score = 28.3 bits (62), Expect = 2.9, Method: Composition-based stats. Identities = 6/30 (20%), Positives = 17/30 (56%) Query: 140 QREVNERQARELADKYGIPYFETSAATGQN 169 +R + + +R+L ++ + + +TS+ G Sbjct: 340 RRPMAPQTSRKLTEQITLKFIDTSSKIGHG 369 >3VX4-A nrPDB Length = 273 Score = 28.3 bits (62), Expect = 2.9, Method: Composition-based stats. Identities = 8/17 (47%), Positives = 10/17 (58%) Query: 11 KLLALGDSGVGKTTFLY 27 K+ +G SG GKTT Sbjct: 63 KVSLVGASGSGKTTLAK 79 >6I3O-A nrPDB Length = 677 Score = 27.9 bits (61), Expect = 3.1, Method: Composition-based stats. Identities = 8/19 (42%), Positives = 14/19 (73%) Query: 12 LLALGDSGVGKTTFLYRYT 30 L+ +G++G GKTT + +Y Sbjct: 31 LIVVGETGSGKTTQVTQYL 49 >5LKM-A nrPDB Length = 452 Score = 27.9 bits (61), Expect = 3.1, Method: Composition-based stats. Identities = 8/20 (40%), Positives = 13/20 (65%) Query: 12 LLALGDSGVGKTTFLYRYTD 31 +L GD G+GK+T L + + Sbjct: 91 VLIGGDPGIGKSTLLLQVST 110 >1H65-A nrPDB Length = 270 Score = 27.9 bits (61), Expect = 3.3, Method: Composition-based stats. Identities = 13/68 (19%), Positives = 20/68 (29%), Gaps = 13/68 (19%) Query: 12 LLALGDSGVGKTTFLYRYTDNKFNPKFITTVGID-FREKRVVYNAQGPNGSSGKAFKVHL 70 +L +G GVGK++ + +G P S L Sbjct: 42 ILVMGKGGVGKSS------------TVNSIIGERVVSISPFQSEGPRPVMVSRSRAGFTL 89 Query: 71 QLWDTAGQ 78 + DT G Sbjct: 90 NIIDTPGL 97 >3KW7-A nrPDB Length = 502 Score = 27.9 bits (61), Expect = 3.3, Method: Composition-based stats. Identities = 24/112 (21%), Positives = 42/112 (37%), Gaps = 24/112 (21%) Query: 61 SSGKAFKVHLQLWDTAGQERFRS-LTTAFFRDAMGFLLMFD----------LTSQQSFLN 109 +SG +F + D AG + S L+T + G L+++D + + + Sbjct: 88 ASGNSFLYDFTVPDQAGTFWYHSHLSTQYCDGLRGPLVVYDPSDPYASMYDVDDDTTVIT 147 Query: 110 VRNWMSQL--QANAYCENPDIVLI--------GNKADLPDQREVNERQAREL 151 + +W A+ N D VLI GN +DL + Q + Sbjct: 148 LSDWYHTAAKLGPAFPPNADSVLINGLGRFAGGNASDLA---VITVEQNKRY 196 >3VQT-A nrPDB Length = 548 Score = 27.9 bits (61), Expect = 3.4, Method: Composition-based stats. Identities = 13/68 (19%), Positives = 19/68 (27%), Gaps = 5/68 (7%) Query: 71 QLWDTAGQERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVRNWMSQLQANAYCENPDIVL 130 L DT G + F T L++ D V +L ++ Sbjct: 103 NLLDTPGHQDFSEDTYRVLTAVDSALVVIDAAKG-----VEAQTRKLMDVCRMRATPVMT 157 Query: 131 IGNKADLP 138 NK D Sbjct: 158 FVNKMDRE 165 >5FDN-A nrPDB Length = 987 Score = 27.9 bits (61), Expect = 3.5, Method: Composition-based stats. Identities = 12/40 (30%), Positives = 21/40 (52%), Gaps = 2/40 (5%) Query: 161 ETSAATGQNVEKAVETLLDLIMKRMEQCVE--KTQIPDTV 198 E+SA T ++E+ + L+ + K E+ + K Q D V Sbjct: 149 ESSATTESDIEETFKRLVSDLGKSPEEIFDALKNQTVDLV 188 >5DO7-A nrPDB Length = 666 Score = 27.9 bits (61), Expect = 3.5, Method: Composition-based stats. Identities = 9/15 (60%), Positives = 10/15 (66%) Query: 12 LLALGDSGVGKTTFL 26 + LG SG GKTT L Sbjct: 82 MCILGSSGSGKTTLL 96 >4XD7-D nrPDB Length = 483 Score = 27.9 bits (61), Expect = 3.6, Method: Composition-based stats. Identities = 11/45 (24%), Positives = 16/45 (35%) Query: 11 KLLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYNA 55 K+ G +GVGKT + N +V E+ N Sbjct: 163 KIGLFGGAGVGKTVLIQELIHNIAQEHGGISVFAGVGERTREGND 207 >3GMT-A nrPDB Length = 230 Score = 27.9 bits (61), Expect = 3.6, Method: Composition-based stats. Identities = 11/32 (34%), Positives = 16/32 (50%), Gaps = 1/32 (3%) Query: 10 IKLLALGDSGVGKTTFLYRYTDNKFNPKFITT 41 ++L+ LG G GK T + KF I+T Sbjct: 9 MRLILLGAPGAGKGTQAN-FIKEKFGIPQIST 39 >5JSZ-B nrPDB Length = 287 Score = 27.9 bits (61), Expect = 3.7, Method: Composition-based stats. Identities = 9/32 (28%), Positives = 14/32 (43%), Gaps = 5/32 (15%) Query: 12 LLALGDSGVGKTTFLYRYTDNKFNPKFITTVG 43 + +G +G GK+T + FN T G Sbjct: 36 IALVGHTGSGKSTLMQ-----HFNALLKPTSG 62 >3L43-A nrPDB Length = 319 Score = 27.6 bits (60), Expect = 4.0, Method: Composition-based stats. Identities = 6/25 (24%), Positives = 11/25 (44%) Query: 12 LLALGDSGVGKTTFLYRYTDNKFNP 36 + +G GK++ L + F P Sbjct: 47 IAVVGGQSAGKSSVLENFVGRDFLP 71 >2AXV-A nrPDB Length = 317 Score = 27.6 bits (60), Expect = 4.0, Method: Composition-based stats. Identities = 9/39 (23%), Positives = 19/39 (48%) Query: 138 PDQREVNERQARELADKYGIPYFETSAATGQNVEKAVET 176 D R ++ + + +++ G+ +FE G N + ET Sbjct: 37 ADSRPISVEELSKFSERLGVNFFEILNRAGMNTKSVNET 75 >3J3U-A nrPDB Length = 810 Score = 27.6 bits (60), Expect = 4.2, Method: Composition-based stats. Identities = 7/28 (25%), Positives = 13/28 (46%), Gaps = 4/28 (14%) Query: 13 LALGDSGVGKTT----FLYRYTDNKFNP 36 + +G+ GVGKT + +N+ Sbjct: 205 VLIGEPGVGKTAIAEGLAQQIINNEVPE 232 >2W6I-D nrPDB Length = 528 Score = 27.6 bits (60), Expect = 4.2, Method: Composition-based stats. Identities = 12/65 (18%), Positives = 19/65 (29%) Query: 5 DYDYLIKLLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYNAQGPNGSSGK 64 Y K+ G +GVGKT + +N +V E+ N Sbjct: 195 PYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAGVGERTREGNDLYHEMIESG 254 Query: 65 AFKVH 69 + Sbjct: 255 VINLK 259 >4NP6-A nrPDB Length = 217 Score = 27.6 bits (60), Expect = 4.3, Method: Composition-based stats. Identities = 10/32 (31%), Positives = 17/32 (53%), Gaps = 1/32 (3%) Query: 10 IKLLALGDSGVGKTTFLYRYTDNKFNPKFITT 41 ++++ LG G GK T ++ KF I+T Sbjct: 4 MRIILLGAPGAGKGTQA-QFIMEKFGIPQIST 34 >2AKA-B nrPDB Length = 299 Score = 27.6 bits (60), Expect = 4.3, Method: Composition-based stats. Identities = 6/25 (24%), Positives = 11/25 (44%) Query: 12 LLALGDSGVGKTTFLYRYTDNKFNP 36 + +G GK++ L + F P Sbjct: 29 IAVVGGQSAGKSSVLENFVGRDFLP 53 >4UUD-B nrPDB Length = 864 Score = 27.6 bits (60), Expect = 4.4, Method: Composition-based stats. Identities = 6/25 (24%), Positives = 11/25 (44%) Query: 12 LLALGDSGVGKTTFLYRYTDNKFNP 36 + +G GK++ L + F P Sbjct: 34 IAVVGGQSAGKSSVLENFVGRDFLP 58 >2XND-D nrPDB Length = 467 Score = 27.6 bits (60), Expect = 4.6, Method: Composition-based stats. Identities = 12/65 (18%), Positives = 19/65 (29%) Query: 5 DYDYLIKLLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYNAQGPNGSSGK 64 Y K+ G +GVGKT + +N +V E+ N Sbjct: 137 PYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAGVGERTREGNDLYHEMIESG 196 Query: 65 AFKVH 69 + Sbjct: 197 VINLK 201 >2X2E-A nrPDB Length = 353 Score = 27.6 bits (60), Expect = 4.6, Method: Composition-based stats. Identities = 6/25 (24%), Positives = 11/25 (44%) Query: 12 LLALGDSGVGKTTFLYRYTDNKFNP 36 + +G GK++ L + F P Sbjct: 34 IAVVGGQSAGKSSVLENFVGRDFLP 58 >5VHN-D nrPDB Length = 262 Score = 27.6 bits (60), Expect = 4.6, Method: Composition-based stats. Identities = 22/130 (16%), Positives = 42/130 (32%), Gaps = 21/130 (16%) Query: 12 LLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRV-----VYNAQGPNGSSGKAF 66 +L G G GKT + FI VG +F +K + + Sbjct: 58 VLMYGPPGCGKTMLAKAVAHHT-TAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPA 116 Query: 67 KVHLQLWDTAGQERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVRNWMSQLQANAYCENP 126 + + D +RF + T A ++ + ++Q+ N Sbjct: 117 IIFIDEIDAIATKRFDAQTGA---------------DREVQRILLELLNQMDGFDQNVNV 161 Query: 127 DIVLIGNKAD 136 +++ N+AD Sbjct: 162 KVIMATNRAD 171 >4XJR-A nrPDB Length = 454 Score = 27.6 bits (60), Expect = 4.6, Method: Composition-based stats. Identities = 8/40 (20%), Positives = 19/40 (47%), Gaps = 1/40 (2%) Query: 96 LLMFDLTSQQSFLNVRNWMSQLQANAYCENPDIVLIGNKA 135 +++ D S ++ W ++ N + ++L+GNK Sbjct: 257 IIVVD-KGLNSIPKLKVWTISMRQNYWGSEGRLLLLGNKI 295 >2IVY-A nrPDB Length = 101 Score = 27.6 bits (60), Expect = 4.7, Method: Composition-based stats. Identities = 11/61 (18%), Positives = 24/61 (39%), Gaps = 6/61 (9%) Query: 91 DAMGFLLMFDLTSQQSFLNVRNWMSQLQANAYCENPDIVLIGNKADLPDQREVNERQARE 150 AM +L+ +D+T N+RN +++ + + DL R + + Sbjct: 1 GAMLYLIFYDITD----DNLRNRVAEFLKKKGLDRIQYSVFM--GDLNSSRLKDVEAGLK 54 Query: 151 L 151 + Sbjct: 55 I 55 >3MKR-B nrPDB Length = 320 Score = 27.6 bits (60), Expect = 4.8, Method: Composition-based stats. Identities = 6/46 (13%), Positives = 19/46 (41%), Gaps = 5/46 (10%) Query: 97 LMFDLTSQQSFLNVRNWMSQLQANAYCENPDIVLIGNKADLPDQRE 142 L + LT+ F + + ++++ NK ++ + ++ Sbjct: 108 LCYQLTTVGKFEEAVEKFRSILL-----SVPLLVVDNKQEIAEAQQ 148 >6B8D-A nrPDB Length = 408 Score = 27.6 bits (60), Expect = 5.0, Method: Composition-based stats. Identities = 29/181 (16%), Positives = 54/181 (29%), Gaps = 28/181 (15%) Query: 20 VGKTT-----FLYRYTDNKFNPKFITTVGIDFREK--------RVVYNAQGPNGSSGKAF 66 GKTT Y +K +D+ E+ +G S + Sbjct: 24 AGKTTTTERILFYTGVSHKIGEVHDGAATMDWMEQEQERGITITSAATTAFWSGMSQQFP 83 Query: 67 KVHLQLWDTAGQERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVRNWMSQLQANAYCENP 126 + + + DT G F R G ++++ + V+ + A Sbjct: 84 QHRINVIDTPGHVDFTVEVERSMRVLDGAVMVY-----CAVGGVQPQSETVWRQANKYEV 138 Query: 127 DIVLIGNKADLPDQ---REVNERQARELADKYGIPYFETSAATGQNVEKAVETLLDLIMK 183 + NK D R V + + R A+ + E+ ++DLI Sbjct: 139 PRIAFVNKMDRTGANFLRVVEQLKTRLGANAIPLQ-------LPVGAEENFTGVVDLIKM 191 Query: 184 R 184 + Sbjct: 192 K 192 >1LVG-A nrPDB Length = 198 Score = 27.6 bits (60), Expect = 5.0, Method: Composition-based stats. Identities = 7/18 (38%), Positives = 11/18 (61%) Query: 12 LLALGDSGVGKTTFLYRY 29 ++ G SG GK+T L + Sbjct: 7 VVLSGPSGAGKSTLLKKL 24 >5A3F-A nrPDB Length = 754 Score = 27.2 bits (59), Expect = 5.3, Method: Composition-based stats. Identities = 6/25 (24%), Positives = 11/25 (44%) Query: 12 LLALGDSGVGKTTFLYRYTDNKFNP 36 + +G GK++ L + F P Sbjct: 34 IAVVGGQSAGKSSVLENFVGRDFLP 58 >5NIK-J nrPDB Length = 654 Score = 27.2 bits (59), Expect = 5.3, Method: Composition-based stats. Identities = 6/16 (37%), Positives = 10/16 (62%) Query: 12 LLALGDSGVGKTTFLY 27 + +G SG GK+T + Sbjct: 37 VAIVGASGSGKSTLMN 52 >5LJA-A nrPDB Length = 231 Score = 27.2 bits (59), Expect = 5.3, Method: Composition-based stats. Identities = 6/16 (37%), Positives = 10/16 (62%) Query: 12 LLALGDSGVGKTTFLY 27 + +G SG GK+T + Sbjct: 37 VAIVGASGSGKSTLMN 52 >5T0C-AD nrPDB Length = 418 Score = 27.2 bits (59), Expect = 5.7, Method: Composition-based stats. Identities = 22/130 (16%), Positives = 42/130 (32%), Gaps = 21/130 (16%) Query: 12 LLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRV-----VYNAQGPNGSSGKAF 66 +L G G GKT + FI VG +F +K + + Sbjct: 202 VLMYGPPGCGKTMLAKAVAHHT-TAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPA 260 Query: 67 KVHLQLWDTAGQERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVRNWMSQLQANAYCENP 126 + + D +RF + T A ++ + ++Q+ N Sbjct: 261 IIFIDEIDAIATKRFDAQTGA---------------DREVQRILLELLNQMDGFDQNVNV 305 Query: 127 DIVLIGNKAD 136 +++ N+AD Sbjct: 306 KVIMATNRAD 315 >6DLV-b nrPDB Length = 748 Score = 27.2 bits (59), Expect = 5.7, Method: Composition-based stats. Identities = 6/25 (24%), Positives = 11/25 (44%) Query: 12 LLALGDSGVGKTTFLYRYTDNKFNP 36 + +G GK++ L + F P Sbjct: 34 IAVVGGQSAGKSSVLENFVGRDFLP 58 >1PUI-A nrPDB Length = 210 Score = 27.2 bits (59), Expect = 5.9, Method: Composition-based stats. Identities = 32/183 (17%), Positives = 59/183 (32%), Gaps = 25/183 (13%) Query: 7 DYLIKLLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYNAQGPNGSSGKAF 66 D I++ G S GK++ L T+ K + T G Sbjct: 24 DTGIEVAFAGRSNAGKSSALNTLTNQKSLARTSKTPGRTQLINLFEVADGKRLVDLPGYG 83 Query: 67 KVHLQLWDTAGQERFRSLTTA----FF---RDAMGFLLMFDLTSQQSFLNVRNWMSQLQA 119 + E + + + G +++ D+ +++ Q+ Sbjct: 84 YAEVP-------EEMKRKWQRALGEYLEKRQSLQGLVVLMDIRHP-----LKDLDQQMIE 131 Query: 120 NAYCENPDIVLIGNKAD--LPDQREVNERQARE--LADKYGIPYFET-SAATGQNVEKAV 174 A N ++++ KAD R+ RE LA + ET S+ Q V+K Sbjct: 132 WAVDSNIAVLVLLTKADKLASGARKAQLNMVREAVLAFNGDVQ-VETFSSLKKQGVDKLR 190 Query: 175 ETL 177 + L Sbjct: 191 QKL 193 >2PCL-A nrPDB Length = 224 Score = 27.2 bits (59), Expect = 6.2, Method: Composition-based stats. Identities = 8/16 (50%), Positives = 11/16 (68%) Query: 12 LLALGDSGVGKTTFLY 27 + +G SG GK+T LY Sbjct: 33 VSIIGASGSGKSTLLY 48 >2DHR-A nrPDB Length = 499 Score = 27.2 bits (59), Expect = 6.2, Method: Composition-based stats. Identities = 16/42 (38%), Positives = 19/42 (45%), Gaps = 1/42 (2%) Query: 12 LLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVY 53 +L +G GVGKT R + FIT G DF E V Sbjct: 67 VLLVGPPGVGKTHLA-RAVAGEARVPFITASGSDFVEMFVGV 107 >1IY1-A nrPDB Length = 254 Score = 27.2 bits (59), Expect = 6.2, Method: Composition-based stats. Identities = 16/42 (38%), Positives = 19/42 (45%), Gaps = 1/42 (2%) Query: 12 LLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVY 53 +L +G GVGKT R + FIT G DF E V Sbjct: 52 VLLVGPPGVGKTHLA-RAVAGEARVPFITASGSDFVEMFVGV 92 >2YVU-A nrPDB Length = 186 Score = 27.2 bits (59), Expect = 6.3, Method: Composition-based stats. Identities = 11/44 (25%), Positives = 13/44 (29%) Query: 14 ALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYNAQG 57 G G GKTT R D + V + V G Sbjct: 18 LTGLPGSGKTTIATRLADLLQKEGYRVEVLDGDWARTTVSEGAG 61 >6QUZ-A nrPDB Length = 587 Score = 27.2 bits (59), Expect = 6.4, Method: Composition-based stats. Identities = 6/16 (37%), Positives = 11/16 (68%) Query: 12 LLALGDSGVGKTTFLY 27 + LG++G GK+T + Sbjct: 372 VAVLGETGSGKSTLMN 387 >6CY1-A nrPDB Length = 329 Score = 27.2 bits (59), Expect = 6.4, Method: Composition-based stats. Identities = 14/90 (15%), Positives = 32/90 (35%), Gaps = 8/90 (8%) Query: 12 LLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYNAQGPNGSSGKAFKVHLQ 71 ++ +G +GVGKTT + + + +G + + V Sbjct: 126 IMVVGVNGVGKTTTIGKLAHQFKSEGLKVVLGAADTFRAAAVDQLVIWSERVGVPIVKQA 185 Query: 72 LWDTAGQE----RFRSLTTAFFRDAMGFLL 97 + G + F ++ +A +DA ++ Sbjct: 186 M----GSDPASVAFDTVQSAVSQDADVVII 211 >3WBG-A nrPDB Length = 153 Score = 27.2 bits (59), Expect = 6.5, Method: Composition-based stats. Identities = 12/38 (31%), Positives = 16/38 (42%), Gaps = 2/38 (5%) Query: 42 VGIDFREKRVVYNAQGPNGSSGKAFKVHLQLWDTAGQE 79 +G++F E + VHLQ WD GQE Sbjct: 87 LGVEFDETTADDRKVKSIVTLDGGKLVHLQKWD--GQE 122 >1IRQ-A nrPDB Length = 71 Score = 26.8 bits (58), Expect = 6.9, Method: Composition-based stats. Identities = 14/51 (27%), Positives = 25/51 (49%), Gaps = 6/51 (11%) Query: 134 KADLPDQREVNERQARELADKYGIPYFETSAATGQNVEKAVETLLDLIMKR 184 K D+ + V R AD + I ET A G NV++ ++ L+ +++ Sbjct: 21 KKDIMGDKTV-----RVRADLHHIIKIET-AKNGGNVKEVMDQALEEYIRK 65 >6AQ1-A nrPDB Length = 136 Score = 26.8 bits (58), Expect = 7.6, Method: Composition-based stats. Identities = 12/38 (31%), Positives = 16/38 (42%), Gaps = 2/38 (5%) Query: 42 VGIDFREKRVVYNAQGPNGSSGKAFKVHLQLWDTAGQE 79 +G++F E + VHLQ WD GQE Sbjct: 70 LGVEFDETTADDRKVKSIVTLDGGKLVHLQKWD--GQE 105 >5DGX-A nrPDB Length = 256 Score = 26.8 bits (58), Expect = 7.7, Method: Composition-based stats. Identities = 12/44 (27%), Positives = 20/44 (45%), Gaps = 5/44 (11%) Query: 12 LLALGDSGVGKTTFLYRYTDNKFNPKFITTV---GIDFREKRVV 52 + +G SG GKTT + +F + + G+D RE + Sbjct: 47 VAFVGKSGSGKTTLTSIIS--RFYTQHEGEILLDGVDTRELTLE 88 >6N8N-W nrPDB Length = 640 Score = 26.8 bits (58), Expect = 8.3, Method: Composition-based stats. Identities = 8/46 (17%), Positives = 17/46 (36%), Gaps = 1/46 (2%) Query: 10 IKLLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYNA 55 I + +G VGK++ + K +T G + + + Sbjct: 337 INIGLVGYPNVGKSSTINSLVGAKKVS-VSSTPGKTKHFQTIKLSD 381 >5T62-W nrPDB Length = 651 Score = 26.8 bits (58), Expect = 8.4, Method: Composition-based stats. Identities = 8/46 (17%), Positives = 17/46 (36%), Gaps = 1/46 (2%) Query: 10 IKLLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYNA 55 I + +G VGK++ + K +T G + + + Sbjct: 337 INIGLVGYPNVGKSSTINSLVGAKKVS-VSSTPGKTKHFQTIKLSD 381 >3KQ0-A nrPDB Length = 192 Score = 26.4 bits (57), Expect = 8.7, Method: Composition-based stats. Identities = 10/31 (32%), Positives = 15/31 (48%), Gaps = 2/31 (6%) Query: 75 TAGQERFRSLTTAFFRDAMGFLLMFDLTSQQ 105 GQE F L RD ++L FD+ ++ Sbjct: 92 VGGQEHFAHL--LILRDTKTYMLAFDVNDEK 120 >5OWV-A nrPDB Length = 732 Score = 26.4 bits (57), Expect = 8.7, Method: Composition-based stats. Identities = 12/65 (18%), Positives = 21/65 (32%), Gaps = 11/65 (16%) Query: 10 IKLLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYNAQGPNGSSGKAFKVH 69 + G GK++ L F +G+ + A S GK+ + Sbjct: 163 FNIAITGVMNAGKSSLLNALLKEDF-------LGVSNIPET----ANLTVLSYGKSEEAK 211 Query: 70 LQLWD 74 + WD Sbjct: 212 IYFWD 216 >2HF8-A nrPDB Length = 226 Score = 26.4 bits (57), Expect = 8.7, Method: Composition-based stats. Identities = 31/180 (17%), Positives = 66/180 (36%), Gaps = 12/180 (6%) Query: 16 GDSGVGKTTFLYRYTDNKFNPKFITTVGIDF-----REKRVVYNAQGPNGSSGKAFKVHL 70 G G GKT + + DN + I + D E+ + A+ ++GK + Sbjct: 45 GAIGSGKTLLIEKLIDNLKDKYKIACIAGDVIAKFDAERMEKHGAKVVPLNTGKECHLDA 104 Query: 71 QLWDTAGQERFRSLTTAFFRDAMGFLLM---FDLTSQQSFLNVRNWMSQ--LQANAYCEN 125 L A ++ F + +G L+ FDL + + + + ++ + Sbjct: 105 HLVGHALEDLNLDEIDLLFIENVGNLICPADFDLGTHKRIVVISTTEGDDTIEKHPGIMK 164 Query: 126 PDIVLIGNKADLPDQREVNERQARELADKYG--IPYFETSAATGQNVEKAVETLLDLIMK 183 +++ NK DL D + ++ A + S T + +K +E + + + Sbjct: 165 TADLIVINKIDLADAVGADIKKMENDAKRINPDAEVVLLSLKTMEGFDKVLEFIEKSVKE 224 >4Q7K-A nrPDB Length = 250 Score = 26.4 bits (57), Expect = 8.9, Method: Composition-based stats. Identities = 6/16 (37%), Positives = 11/16 (68%) Query: 12 LLALGDSGVGKTTFLY 27 + LG++G GK+T + Sbjct: 34 VAVLGETGSGKSTLMN 49 >4LV5-B nrPDB Length = 423 Score = 26.4 bits (57), Expect = 9.8, Method: Composition-based stats. Identities = 11/69 (15%), Positives = 22/69 (31%), Gaps = 8/69 (11%) Query: 9 LIKLLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYNAQGPNGSSGKAFKV 68 ++ + G++G GK++F+ + G+ V + V Sbjct: 79 VLNVAVTGETGSGKSSFINTLRGIGNEEEGAAKTGV------VEVTMERHPYKHPNIPNV 132 Query: 69 HLQLWDTAG 77 WD G Sbjct: 133 VF--WDLPG 139 >4ZPR-B nrPDB Length = 345 Score = 26.4 bits (57), Expect = 10.0, Method: Composition-based stats. Identities = 11/37 (29%), Positives = 17/37 (45%) Query: 136 DLPDQREVNERQARELADKYGIPYFETSAATGQNVEK 172 D+ + +V Q R LA + G + ET A N + Sbjct: 281 DMFTKGQVTTGQYRMLAKRGGYVWVETQATVIYNTKN 317 Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta Posted date: Jan 3, 2023 9:05 PM Number of letters in database: 10,336,785 Number of sequences in database: 36,641 Lambda K H 0.311 0.151 0.438 Lambda K H 0.267 0.0462 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 9,303,022 Number of Sequences: 36641 Number of extensions: 381806 Number of successful extensions: 3084 Number of sequences better than 10.0: 471 Number of HSP's better than 10.0 without gapping: 525 Number of HSP's successfully gapped in prelim test: 149 Number of HSP's that attempted gapping in prelim test: 1763 Number of HSP's gapped (non-prelim): 750 length of query: 218 length of database: 10,336,785 effective HSP length: 93 effective length of query: 125 effective length of database: 6,929,172 effective search space: 866146500 effective search space used: 866146500 T: 11 A: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.1 bits) S2: 57 (26.4 bits)