BLASTP 2.2.23 [Feb-03-2010] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= G8JZS4 (738 letters) Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta 36,641 sequences; 10,336,785 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value 2D73-A nrPDB 1508 0.0 5HQA-A nrPDB 504 e-143 3A24-A nrPDB 209 4e-54 5XFM-A nrPDB 130 1e-30 3AI7-A nrPDB 32 0.79 3GC2-A nrPDB 32 0.90 1FHV-A nrPDB 32 1.2 1DOI-A nrPDB 31 2.2 1R18-A nrPDB 30 2.9 1E0Z-A nrPDB 30 3.2 2E9C-A nrPDB 30 3.6 5MRC-PP nrPDB 30 3.6 4YN5-A nrPDB 30 4.2 4Z9A-A nrPDB 30 4.3 4ECN-A nrPDB 30 4.9 5EUA-A nrPDB 29 5.8 6NS2-A nrPDB 29 6.8 1ON3-A nrPDB 29 7.5 >2D73-A nrPDB Length = 738 Score = 1508 bits (3905), Expect = 0.0, Method: Compositional matrix adjust. Identities = 717/720 (99%), Positives = 719/720 (99%) Query: 19 ANAQQKLTSPDNNLVMTFQVDSKGAPTYELTYKNKVVIKPSTLGLELKKEDNTRTDFDWV 78 ++ QQKLTSPDNNLVMTFQVDSKGAPTYELTYKNKVVIKPSTLGLELKKEDNTRTDFDWV Sbjct: 19 SHMQQKLTSPDNNLVMTFQVDSKGAPTYELTYKNKVVIKPSTLGLELKKEDNTRTDFDWV 78 Query: 79 DRRDLTKLDSKTNLYDGFEVKDTQTATFDETWQPVWGEEKEIRNHYNELAVTLYQPMNDR 138 DRRDLTKLDSKTNLYDGFEVKDTQTATFDETWQPVWGEEKEIRNHYNELAVTLYQPMNDR Sbjct: 79 DRRDLTKLDSKTNLYDGFEVKDTQTATFDETWQPVWGEEKEIRNHYNELAVTLYQPMNDR 138 Query: 139 SIVIRFRLFNDGLGFRYEFPQQKSLNYFVIKEEHSQFGMNGDHIAFWIPGDYDTQEYDYT 198 SIVIRFRLFNDGLGFRYEFPQQKSLNYFVIKEEHSQFGMNGDHIAFWIPGDYDTQEYDYT Sbjct: 139 SIVIRFRLFNDGLGFRYEFPQQKSLNYFVIKEEHSQFGMNGDHIAFWIPGDYDTQEYDYT 198 Query: 199 ISRLSEIRGLMKEAITPNSSQTPFSQTGVQTALMMKTDDGLYINLHEAALVDYSCMHLNL 258 ISRLSEIRGLMKEAITPNSSQTPFSQTGVQTALMMKTDDGLYINLHEAALVDYSCMHLNL Sbjct: 199 ISRLSEIRGLMKEAITPNSSQTPFSQTGVQTALMMKTDDGLYINLHEAALVDYSCMHLNL 258 Query: 259 DDKNMVFESWLTPDAKGDKGYMQTPCNTPWRTIIVSDDARNILASRITLNLNEPCKIADA 318 DDKNMVFESWLTPDAKGDKGYMQTPCNTPWRTIIVSDDARNILASRITLNLNEPCKIADA Sbjct: 259 DDKNMVFESWLTPDAKGDKGYMQTPCNTPWRTIIVSDDARNILASRITLNLNEPCKIADA 318 Query: 319 ASWVKPVKYIGVWWDMITGKGSWAYTDELTSVKLGETDYSKTKPNGKHSANTANVKRYID 378 ASWVKPVKYIGVWWDMITGKGSWAYTDELTSVKLGETDYSKTKPNGKHSANTANVKRYID Sbjct: 319 ASWVKPVKYIGVWWDMITGKGSWAYTDELTSVKLGETDYSKTKPNGKHSANTANVKRYID 378 Query: 379 FAAAHGFDAVLVEGWNEGWEDWFGNSKDYVFDFVTPYPDFDVKEIHRYAARKGIKMMMHH 438 FAAAHGFDAVLVEGWNEGWEDWFGNSKDYVFDFVTPYPDFDVKEIHRYAARKGIKMMMHH Sbjct: 379 FAAAHGFDAVLVEGWNEGWEDWFGNSKDYVFDFVTPYPDFDVKEIHRYAARKGIKMMMHH 438 Query: 439 ETSASVRNYERHMDKAYQFMADNGYNSVKSGYVGNIIPRGEHHYGQWMNNHYLYAVKKAA 498 ETSASVRNYERHMDKAYQFMADNGYNSVKSGYVGNIIPRGEHHYGQWMNNHYLYAVKKAA Sbjct: 439 ETSASVRNYERHMDKAYQFMADNGYNSVKSGYVGNIIPRGEHHYGQWMNNHYLYAVKKAA 498 Query: 499 DYKIMVNAHEATRPTGICRTYPNLIGNESARGTEYESFGGNKVYHTTILPFTRLVGGPMD 558 DYKIMVNAHEATRPTGICRTYPNLIGNESARGTEYESFGGNKVYHTTILPFTRLVGGPMD Sbjct: 499 DYKIMVNAHEATRPTGICRTYPNLIGNESARGTEYESFGGNKVYHTTILPFTRLVGGPMD 558 Query: 559 YTPGIFETHCNKMNPANNSQVRSTIARQLALYVTMYSPLQMAADIPENYERFMDAFQFIK 618 YTPGIFETHCNKMNPANNSQVRSTIARQLALYVTMYSPLQMAADIPENYERFMDAFQFIK Sbjct: 559 YTPGIFETHCNKMNPANNSQVRSTIARQLALYVTMYSPLQMAADIPENYERFMDAFQFIK 618 Query: 619 DVALDWDETNYLEAEPGEYITIARKAKDTDDWYVGCTAGENGHTSKLVFDFLTPGKQYIA 678 DVALDWDETNYLEAEPGEYITIARKAKDTDDWYVGCTAGENGHTSKLVFDFLTPGKQYIA Sbjct: 619 DVALDWDETNYLEAEPGEYITIARKAKDTDDWYVGCTAGENGHTSKLVFDFLTPGKQYIA 678 Query: 679 TVYADAKDADWKENPQAYTIKKGILTNKSKLNLHAANGGGYAISIKEVKDKSEAKGLKRL 738 TVYADAKDADWKENPQAYTIKKGILTNKSKLNLHAANGGGYAISIKEVKDKSEAKGLKRL Sbjct: 679 TVYADAKDADWKENPQAYTIKKGILTNKSKLNLHAANGGGYAISIKEVKDKSEAKGLKRL 738 >5HQA-A nrPDB Length = 669 Score = 504 bits (1299), Expect = e-143, Method: Compositional matrix adjust. Identities = 288/724 (39%), Positives = 405/724 (55%), Gaps = 87/724 (12%) Query: 25 LTSPDNNLVMTFQVDSKGAPTYELTYKNKVVIKPSTLGLELKKEDNTRTDFDWVDRRDLT 84 + SPD N+ + D + P+Y +++KNK VI S LG E K+ Sbjct: 3 VQSPDGNIKIIIS-DEQSTPSYSISFKNKTVINNSALGFEFKQH---------------- 45 Query: 85 KLDSKTNLYDGFEVKDTQTATFDETWQPVWGEEKEIRNHYNELAVTLYQPM-NDRSIVIR 143 + F++ Q + + WQ WGE + + + +NE+ VT +P + +R Sbjct: 46 -----APFSNSFKITKVQQQSTNTQWQQPWGERQTVVDQHNEVTVTFAKPQPQGGTYSVR 100 Query: 144 FRLFNDGLGFRYEFPQQKSLNYFVIKEEHSQFGMNGDHIA--FWIPG-DYDTQEYDYTIS 200 F+ F+ G+GFRYE P+Q LN I +E ++F +N H A +WIP ++ EY Y + Sbjct: 101 FKAFDSGVGFRYEVPKQAGLNNIEITKELTEFAVNNSHTATAWWIPARGWNRYEYVYNTT 160 Query: 201 RLSEIRGLMKEAITPNSSQTPFSQTGVQTALMMKTDDGLYINLHEAALVDYSCMHLNLDD 260 L++ + TPF+ K DG++I++HEAALVDY+ M LN Sbjct: 161 PLNDAALV----------HTPFT---------FKNQDGVHISIHEAALVDYAAMVLN-QR 200 Query: 261 KNMVFESWLTPDAKGDKGYMQTPCNTPWRTIIVSDDARNILASRITLNLNEPCKIADAAS 320 + VF++ LTP + G Q NTPWRTI + + A +++ S I LNLNEP K+ D S Sbjct: 201 RPGVFQADLTPWSSGVAVKKQGAFNTPWRTIQIGEKAVDLVNSDIILNLNEPNKLGDV-S 259 Query: 321 WVKPVKYIGVWWDMITGKGSWAYTDELTSVKLGETDYSKTKPNGKHSANTANVKRYIDFA 380 WVKP KYIG+WW M +W D KH A T N K Y+DFA Sbjct: 260 WVKPGKYIGIWWGMHINTHTWGSGD-------------------KHGATTKNTKYYMDFA 300 Query: 381 AAHGFDAVLVEGWNEGWE-DWFGNSKDYVFDFVTPYPDFDVKEIHRYAARKGIKMMMHHE 439 A +GFD VLVEGWN GW+ DWF N VF F PY DFD+ + +Y+ + G++++ HHE Sbjct: 301 AKYGFDGVLVEGWNTGWDGDWFFNGD--VFSFTQPYDDFDIAALTKYSKQTGVQLIGHHE 358 Query: 440 TSASVRNYERHMDKAYQFMADNGYNSVKSGYV---GNI-------IPRGEHHYGQWMNNH 489 TS +V NY + M A+ + + VK+GYV GNI I R E H GQ+M N Sbjct: 359 TSGNVSNYRKQMADAFALYEKSNVSQVKTGYVADGGNIKRIDKNGIARHEWHDGQFMVNE 418 Query: 490 YLYAVKKAADYKIMVNAHEATRPTGICRTYPNLIGNESARGTEYESFGG--NKVYHTTIL 547 YL+ VK AA +KI +N HE + TG+ RTYPN I E ARG E+ ++G N H ++L Sbjct: 419 YLHNVKLAAKHKISINTHEPIKDTGLRRTYPNWITREGARGQEFNAWGTPPNPPEHISML 478 Query: 548 PFTRLVGGPMDYTPGIFETHCNKMNPANNSQVRSTIARQLALYVTMYSPLQMAADIPENY 607 FTR++ GPMD+TPGIF+ N + AN ++ ++T+A+QLALYV +YSP+QMAAD+P+NY Sbjct: 479 AFTRMLAGPMDFTPGIFDLSFNGLG-ANTNRPQTTLAKQLALYVVLYSPIQMAADLPKNY 537 Query: 608 ERFMDAFQFIKDVALDWDETNYLEAEPGEYITIARKAKDTD-----DWYVGCTAGENGHT 662 DAFQFI+DV DW ++ L+ G++I ARK + D DWY+G E T Sbjct: 538 LAKPDAFQFIQDVPTDWQQSIALDGAVGDFIVFARKERKRDKYTGNDWYLGAVTDEQART 597 Query: 663 SKLVFDFLTPGKQYIATVYADAKDADWKENPQAYTIKKGILTNKSKLNLHAANGGGYAIS 722 ++ DFL GKQ+ A +Y D K+A+WK NP TI+K ++T KL L A GG AI Sbjct: 598 IEISLDFLDNGKQFEAHIYKDGKNAEWKNNPYDLTIEKRLVTASDKLTLKLATSGGTAIR 657 Query: 723 IKEV 726 K + Sbjct: 658 FKAL 661 >3A24-A nrPDB Length = 641 Score = 209 bits (532), Expect = 4e-54, Method: Compositional matrix adjust. Identities = 198/738 (26%), Positives = 320/738 (43%), Gaps = 142/738 (19%) Query: 27 SPDNNLVMTFQVDSKGAPTYELTYKNKVVIKPSTLGLELKKEDNTRTDFDWVDRRDLTKL 86 SPD NL T + + TY++T + ++ PS + + L Sbjct: 6 SPDGNLKTTITIGDR--LTYDITCNGRQILTPSPISM---------------------TL 42 Query: 87 DSKTNLYDGFEVKDTQTATFDETWQPVWGEEKEIRNHYNELAVTLYQPMNDRSIVIRFRL 146 D+ T + ++ T + DE + E+RNHYN L + + N + FR Sbjct: 43 DNGTVWGENAKLSGTSRKSVDEMIPSPFYRASELRNHYNGLTLRFKKDWN-----VEFRA 97 Query: 147 FNDGLGFRYEFPQQKSLNYFVIKEEHSQFGMNGDHIAFWIP-------GDYDTQ-----E 194 +NDG+ +R+ +K F + E S + D A +P GDY++Q E Sbjct: 98 YNDGIAYRFVNQGKKP---FRVVTEVSDYCFPSDMTAS-VPYVKSGKDGDYNSQFFNSFE 153 Query: 195 YDYTISRLSEIRGLMKEAITPNSSQTPFSQTGVQTALMMKTDDGLYINLHEAALVDYSCM 254 YT +LS++ N + F L++ DG+ + + E+ L +Y + Sbjct: 154 NTYTTDKLSKL----------NKQRLMF------LPLVVDAGDGVKVCITESDLENYPGL 197 Query: 255 HLNLDDKNMVFESWLTPDAK----GDKGYMQT--------------PCNTPWRTIIVSDD 296 +L+ + S P K G +Q P N PWR +V+ Sbjct: 198 YLSASEGANRLSSMHAPYPKRTVQGGHNQLQMLVKEHEDYIAKVDKPRNFPWRIAVVTTT 257 Query: 297 ARNILASRITLNLNEPCKIADAASWVKPVKYIGVWWDMITGKGSWAYTDELTSVKLGETD 356 +++ A+ ++ L P +++D SW+KP K WW+ G D +T V Sbjct: 258 DKDLAATNLSYLLGAPSRMSDL-SWIKPGKVAWDWWNDWNLDG----VDFVTGV------ 306 Query: 357 YSKTKPNGKHSANTANVKRYIDFAAAHGFDAVLVEGWNEGWEDWFGNSKDYVFDFVTPYP 416 N K YIDFA+A+G + V+++ EGW + + D + Sbjct: 307 ------------NNPTYKAYIDFASANGIEYVILD---EGW------AVNLQADLMQVVK 345 Query: 417 DFDVKEIHRYAARKGIKMMMHHETSASVRNYERHMDKAYQFMADNGYNSVKSGYVGNIIP 476 + D+KE+ YAA K + +++ A +ER M+ + A+ G G+ + + Sbjct: 346 EIDLKELVDYAASKNVGIILW----AGYHAFERDMENVCRHYAEMGVK----GFKVDFMD 397 Query: 477 RGEHHYGQWMNNHYLYAVKKAADYKIMVNAHEATRPTGICRTYPNLIGNESARGTE---Y 533 R + Q M A + A YK++++ H +P G+ RTYPN++ E G E + Sbjct: 398 RDD----QEMTAFNYRAAEMCAKYKLILDLHGTHKPAGLNRTYPNVLNFEGVNGLEQMKW 453 Query: 534 ESFGGNKVYHTTILPFTRLVGGPMDYTPGIFE--THCNKMNPANNSQVRSTIARQLALYV 591 S ++V + ++PF R V GPMDYT G + N + + T RQLALYV Sbjct: 454 SSPSVDQVKYDVMIPFIRQVSGPMDYTQGAMRNASKGNYYPCYSEPMSQGTRCRQLALYV 513 Query: 592 TMYSPLQMAADIPENYERFMDAFQFIKDVALDWDETNYLEAEPGEYITIARKAKDTDDWY 651 SP M D P NY R ++ FI ++ WDE+ L+ + GEYI AR+ D WY Sbjct: 514 VFESPFNMLCDTPSNYMREPESTAFIAEIPTVWDESIVLDGKMGEYIVTARRKGDV--WY 571 Query: 652 VGCTAGENGHTSKLVFDFLTPGKQYIATVYADAKDA-----DWKENPQAYTIKKGILTNK 706 VG + ++ FL K Y AT++ D +A D+K +++ IKK Sbjct: 572 VGGITDWSARDIEVDCSFLG-DKSYHATLFKDGVNAHRAGRDYK--CESFPIKK-----D 623 Query: 707 SKLNLHAANGGGYAISIK 724 KL +H A GGG+A+ IK Sbjct: 624 GKLKVHLAPGGGFALKIK 641 >5XFM-A nrPDB Length = 642 Score = 130 bits (328), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 162/718 (22%), Positives = 275/718 (38%), Gaps = 123/718 (17%) Query: 25 LTSPDNNLVMTFQVDSKGAPTYELTYKNKVVIKPSTLGLELKKEDNTRTDFDWVDRRDLT 84 + PD L + V ++ P Y ++Y K +++ S LG+ D T+ Sbjct: 19 VKGPDEKLQLAVFVQNETKPCYSVSYNGKTMLEKSPLGMNTNIGDFTKN----------- 67 Query: 85 KLDSKTNLYDGFEVKDTQTATFDETWQPVWGEEKEIRNHYNELAVTLYQPMNDRSIVIRF 144 ++ D +Q + + NEL L + VI F Sbjct: 68 -----------LKLTGHSVDKIDTVYQQTRIKVSNVHYRANELTCHLENEQGQKLGVI-F 115 Query: 145 RLFNDGLGFRYEFPQQKSLNYFVIKEEHSQFGMNGDHIAFWIPGDYDTQEYDYTISRLSE 204 R+ ++ + FRY P Q +KEE + F F P + T E Sbjct: 116 RVSDNDVAFRYTLPHQGGKASVTVKEEQTGFRFPEQTTTFLCPQSDAMIGWKRTKPSYEE 175 Query: 205 IRGLMKEAITPNSSQTPFSQTGVQTALMMKTDDGLYINLHEAALVDYSCMHLNLDDKNMV 264 +A P S ++ + L +DG ++ + E + C D Sbjct: 176 ----EYKADAPMSDRSQYGHGYTFPCLFRIGNDG-WVLVSETGVDSRYCGSRLSDVSEGN 230 Query: 265 FESWLTPDAKGDKG------YMQTPCNTPWRTIIVSDDARNILASRITLNLNEPCKIADA 318 + P A+ + G P TPWRTI V D + I+ + + ++ P Sbjct: 231 LYTVAFPMAEENNGNGTVAPAFALPGATPWRTITVGDHLKPIVETTVPWDVVSP------ 284 Query: 319 ASWVKPVKYIGVWWDMITGKGSWAYTDELTSVKLGETDYSKTKPNGKHSANTANVKRYID 378 + K+ D G+G+W++ +G S N + RYID Sbjct: 285 ---LYETKH-----DYRFGRGTWSWI---------------LWQDG--SINYDDQVRYID 319 Query: 379 FAAAHGFDAVLVEGWNEGWEDWFGNSKDYVFDFVTPYPDFDVKEIHRYAARKGIKMMMHH 438 FA+A G++ L++ W W+ G+ + +K + YA KG+++ + + Sbjct: 320 FASAMGYEYALIDNW---WDTRIGHQR--------------MKSLVEYARDKGVELFLWY 362 Query: 439 ETSASVRNYER----HMDKA------YQFMADNGYNSVKSGYVGNIIPRGEHHYGQWMNN 488 +S + E+ MD A +++ G +K + G G Sbjct: 363 SSSGYWNDIEQGPVNRMDNAIIRKREMKWLQSLGVKGIKVDFFG----------GDKQET 412 Query: 489 HYLYA--VKKAADYKIMVNAHEATRPTGICRTYPNLIGNESARGTEY----ESFGGNKVY 542 LY + A D+ +MV H T P G R YPN +G+E+ +E + F + + Sbjct: 413 MRLYEDILSDADDHGLMVIFHGCTLPRGWERMYPNYVGSEAVLASENMVFNQHFCDEEAF 472 Query: 543 HTTILPFTRLVGGPMDYTPGIFETHCNKMNPANNSQVRSTIARQLALYVTMYSPLQMAAD 602 +T + PF R G M++ + N+ N ++ R+T QLA V + +P+Q A Sbjct: 473 NTCLHPFIRNTVGSMEFGGCLLNKRLNRNNDGGTTR-RTTDVFQLATTVLLQNPVQNFAL 531 Query: 603 IPENYERF-MDAFQFIKDVALDWDETNYLEAEPGEYITIARKAKDTDDWYVGCT-AGENG 660 P N + F+K V WDET +++ PG+Y+ +AR+ DT WY+ AG+ Sbjct: 532 APNNLKDVPAVCMDFMKRVPTTWDETRFVDGYPGKYVVLARRQGDT--WYLAAVNAGKEP 589 Query: 661 HTSKLVFDFLTPGKQYIATVYADAKDADWKENPQAYTIKKGILTNKSKLNLHAANGGG 718 KL + GK +Y D K K P+ ++K + K+ L GG Sbjct: 590 LKLKLDLEMFA-GK--TVALYKDDK----KGEPELTSLK---VKENGKVQLEIRPQGG 637 >3AI7-A nrPDB Length = 831 Score = 32.3 bits (72), Expect = 0.79, Method: Compositional matrix adjust. Identities = 17/53 (32%), Positives = 28/53 (52%), Gaps = 1/53 (1%) Query: 413 TPYPDFDVKEIHRYA-ARKGIKMMMHHETSASVRNYERHMDKAYQFMADNGYN 464 TPY V I RY + ++M+ + + + E+ D+A+QF DNGY+ Sbjct: 742 TPYDMVRVNRIDRYELTAEALRMIDADKYADKIDELEKFRDEAFQFAVDNGYD 794 >3GC2-A nrPDB Length = 323 Score = 32.0 bits (71), Expect = 0.90, Method: Compositional matrix adjust. Identities = 19/67 (28%), Positives = 30/67 (44%), Gaps = 10/67 (14%) Query: 227 VQTALMMKTDDGLYINLHEAALVDYSCMHLNLDD-------KNMVFESWLTPDAKGDKGY 279 V+ L DG+ +NL A+ D +HL LD K F ++ PD + + Sbjct: 135 VKVGLYEAVRDGMVVNLLLEAIPD---LHLRLDANRAWTPLKAQQFAKYVNPDYRARIAF 191 Query: 280 MQTPCNT 286 ++ PC T Sbjct: 192 LEEPCKT 198 >1FHV-A nrPDB Length = 323 Score = 31.6 bits (70), Expect = 1.2, Method: Compositional matrix adjust. Identities = 19/67 (28%), Positives = 30/67 (44%), Gaps = 10/67 (14%) Query: 227 VQTALMMKTDDGLYINLHEAALVDYSCMHLNLDD-------KNMVFESWLTPDAKGDKGY 279 V+ L DG+ +NL A+ D +HL LD K F ++ PD + + Sbjct: 135 VKVGLYEAVRDGMVVNLLLEAIPD---LHLRLDANRAWTPLKGQQFAKYVNPDYRDRIAF 191 Query: 280 MQTPCNT 286 ++ PC T Sbjct: 192 LEEPCKT 198 >1DOI-A nrPDB Length = 128 Score = 30.8 bits (68), Expect = 2.2, Method: Composition-based stats. Identities = 19/57 (33%), Positives = 28/57 (49%), Gaps = 1/57 (1%) Query: 612 DAFQFIKDVALDWDETNYLEAEPGEYITIARKAKDTDDWYVGCTAGENGHTSKLVFD 668 D F D+ LD ++ LE GEYI A +A+ DW C AG + + +V + Sbjct: 22 DVFGEASDMDLDDEDYGSLEVNEGEYILEAAEAQGY-DWPFSCRAGACANCAAIVLE 77 >1R18-A nrPDB Length = 227 Score = 30.4 bits (67), Expect = 2.9, Method: Composition-based stats. Identities = 21/55 (38%), Positives = 28/55 (50%), Gaps = 4/55 (7%) Query: 244 HEAALVDYSCMHLNLDDKNMVFE-SWLTPDAKGDKGYMQTPCNTPWRTIIVSDDA 297 H+A LV S +LN DD++M+ L + G KGY P N P+ I V A Sbjct: 122 HQAELVRRSKANLNTDDRSMLDSGQLLIVEGDGRKGY---PPNAPYNAIHVGAAA 173 >1E0Z-A nrPDB Length = 128 Score = 30.4 bits (67), Expect = 3.2, Method: Composition-based stats. Identities = 17/53 (32%), Positives = 26/53 (49%), Gaps = 1/53 (1%) Query: 614 FQFIKDVALDWDETNYLEAEPGEYITIARKAKDTDDWYVGCTAGENGHTSKLV 666 F+ D LD ++ +E GEYI A +A+ DW C AG + + +V Sbjct: 24 FEKAADAGLDGEDYGTMEVAEGEYILEAAEAQGY-DWPFSCRAGACANCASIV 75 >2E9C-A nrPDB Length = 253 Score = 30.0 bits (66), Expect = 3.6, Method: Compositional matrix adjust. Identities = 20/72 (27%), Positives = 35/72 (48%), Gaps = 10/72 (13%) Query: 366 HSANTANVKRYIDFAAAHGFDAVLV-----EGWNEGWEDWFGNSKDYVFDFVTPYPDFDV 420 H A +V+R + FAA +G +A+ + E WN ++ + +V+ D +V Sbjct: 43 HKAGAKSVRRAVSFAANNGIEALTLYAFSSENWNRPAQEVSALMELFVWAL-----DSEV 97 Query: 421 KEIHRYAARKGI 432 K +HR+ R I Sbjct: 98 KSLHRHNVRLRI 109 >5MRC-PP nrPDB Length = 119 Score = 30.0 bits (66), Expect = 3.6, Method: Composition-based stats. Identities = 21/56 (37%), Positives = 32/56 (57%), Gaps = 6/56 (10%) Query: 617 IKDVALDWDETNY---LEAEPGEYIT-IARKAKDTDDWYVGCTAGENGHTSKLVFD 668 IKDV LD+D T Y + A+P E +T + RKA +D + T+ + K+VF+ Sbjct: 61 IKDVKLDFDRTKYWIGVGAQPSETVTKLLRKAGILNDAWA--TSKNSNVNRKVVFE 114 >4YN5-A nrPDB Length = 442 Score = 30.0 bits (66), Expect = 4.2, Method: Compositional matrix adjust. Identities = 14/39 (35%), Positives = 20/39 (51%), Gaps = 2/39 (5%) Query: 457 FMADNGYNSVKSGYVGNIIPRGEHH--YGQWMNNHYLYA 493 F+ N YN V NI+P G HH + W++N +A Sbjct: 164 FVTGNQYNDTSGDVVKNILPDGSHHEVFNAWLDNIAAFA 202 >4Z9A-A nrPDB Length = 164 Score = 29.6 bits (65), Expect = 4.3, Method: Compositional matrix adjust. Identities = 31/141 (21%), Positives = 57/141 (40%), Gaps = 15/141 (10%) Query: 3 KRKILSLIAFLCISFIANAQQKLTSPDNNLVMTFQVDSKGAPTYEL----TYKNKVVIKP 58 K + + +C S IA A + D N+ ++VDS YE+ Y+ + +K Sbjct: 13 KSVLFVCLGNICRSPIAEAVFRKLVTDQNISENWRVDSAATSGYEIGNPPDYRGQSCMKR 72 Query: 59 -----STLGLELKKEDNTRTDFD-WVDRRDLTKLDSKTNLYDGFEVKDTQTATFDETWQ- 111 S + ++ KED D+ +D +L L+ K+N + K ++D Q Sbjct: 73 HGIPMSHVARQITKEDFATFDYILCMDESNLRDLNRKSNQVKTCKAKIELLGSYDPQKQL 132 Query: 112 ----PVWGEEKEIRNHYNELA 128 P +G + + Y + Sbjct: 133 IIEDPYYGNDSDFETVYQQCV 153 >4ECN-A nrPDB Length = 876 Score = 29.6 bits (65), Expect = 4.9, Method: Compositional matrix adjust. Identities = 19/77 (24%), Positives = 36/77 (46%), Gaps = 14/77 (18%) Query: 293 VSDDARNILASRITLNLNEPCKIADAASWVKPVKYIGVWWDMITGKGSWAYTDELTSVKL 352 V ++ ++ +++T + N P ++ + A ++K K + W+ + GK +W Y Sbjct: 239 VRGESFTVIDNKLTKDANVPIQLKETAEYIKDYKALKAIWEALDGK-NWRY--------- 288 Query: 353 GETDYSKTKPNGKHSAN 369 YS T N HS N Sbjct: 289 ----YSGTINNTIHSLN 301 >5EUA-A nrPDB Length = 265 Score = 29.3 bits (64), Expect = 5.8, Method: Compositional matrix adjust. Identities = 15/46 (32%), Positives = 23/46 (50%), Gaps = 2/46 (4%) Query: 648 DDWYVGCTAGE--NGHTSKLVFDFLTPGKQYIATVYADAKDADWKE 691 D W G G NG + + F T GK+Y+ +VY +A + +E Sbjct: 202 DSWVTGDKTGSCANGGRNDVAFFITTAGKKYVLSVYTNAPELQGEE 247 >6NS2-A nrPDB Length = 769 Score = 29.3 bits (64), Expect = 6.8, Method: Compositional matrix adjust. Identities = 14/56 (25%), Positives = 25/56 (44%) Query: 333 DMITGKGSWAYTDELTSVKLGETDYSKTKPNGKHSANTANVKRYIDFAAAHGFDAV 388 D++ G+ Y D + + + +S P+ +A+ +K YI A G D V Sbjct: 250 DIMKGRNIGEYDDWYSDARFAQQHFSGVNPSTIETASQDKIKEYISEAQKQGLDKV 305 >1ON3-A nrPDB Length = 523 Score = 28.9 bits (63), Expect = 7.5, Method: Compositional matrix adjust. Identities = 18/62 (29%), Positives = 29/62 (46%), Gaps = 10/62 (16%) Query: 81 RDLTKLDSKTNLYDGFEVKDTQTATFDETWQPVWGEEKEIRNHYNELAVTLYQPMNDRSI 140 RD+ +D K G++V+D D WG+ E++ Y VT + +N RS+ Sbjct: 279 RDIVPIDGKK----GYDVRDVIAKIVD------WGDYLEVKAGYATNLVTAFARVNGRSV 328 Query: 141 VI 142 I Sbjct: 329 GI 330 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: 2D73-A nrPDB 1146 0.0 5HQA-A nrPDB 825 0.0 5XFM-A nrPDB 728 0.0 3A24-A nrPDB 722 0.0 Sequences not found previously or not previously below threshold: 4C7D-A nrPDB 39 0.009 1HP5-A nrPDB 39 0.009 2YLL-A nrPDB 36 0.081 1DLI-A nrPDB 34 0.21 2E9C-A nrPDB 34 0.25 1W78-A nrPDB 34 0.32 4B2O-A nrPDB 33 0.65 5OAR-B nrPDB 30 3.2 5H05-A nrPDB 29 6.0 CONVERGED! >2D73-A nrPDB Length = 738 Score = 1146 bits (2964), Expect = 0.0, Method: Composition-based stats. Identities = 717/720 (99%), Positives = 719/720 (99%) Query: 19 ANAQQKLTSPDNNLVMTFQVDSKGAPTYELTYKNKVVIKPSTLGLELKKEDNTRTDFDWV 78 ++ QQKLTSPDNNLVMTFQVDSKGAPTYELTYKNKVVIKPSTLGLELKKEDNTRTDFDWV Sbjct: 19 SHMQQKLTSPDNNLVMTFQVDSKGAPTYELTYKNKVVIKPSTLGLELKKEDNTRTDFDWV 78 Query: 79 DRRDLTKLDSKTNLYDGFEVKDTQTATFDETWQPVWGEEKEIRNHYNELAVTLYQPMNDR 138 DRRDLTKLDSKTNLYDGFEVKDTQTATFDETWQPVWGEEKEIRNHYNELAVTLYQPMNDR Sbjct: 79 DRRDLTKLDSKTNLYDGFEVKDTQTATFDETWQPVWGEEKEIRNHYNELAVTLYQPMNDR 138 Query: 139 SIVIRFRLFNDGLGFRYEFPQQKSLNYFVIKEEHSQFGMNGDHIAFWIPGDYDTQEYDYT 198 SIVIRFRLFNDGLGFRYEFPQQKSLNYFVIKEEHSQFGMNGDHIAFWIPGDYDTQEYDYT Sbjct: 139 SIVIRFRLFNDGLGFRYEFPQQKSLNYFVIKEEHSQFGMNGDHIAFWIPGDYDTQEYDYT 198 Query: 199 ISRLSEIRGLMKEAITPNSSQTPFSQTGVQTALMMKTDDGLYINLHEAALVDYSCMHLNL 258 ISRLSEIRGLMKEAITPNSSQTPFSQTGVQTALMMKTDDGLYINLHEAALVDYSCMHLNL Sbjct: 199 ISRLSEIRGLMKEAITPNSSQTPFSQTGVQTALMMKTDDGLYINLHEAALVDYSCMHLNL 258 Query: 259 DDKNMVFESWLTPDAKGDKGYMQTPCNTPWRTIIVSDDARNILASRITLNLNEPCKIADA 318 DDKNMVFESWLTPDAKGDKGYMQTPCNTPWRTIIVSDDARNILASRITLNLNEPCKIADA Sbjct: 259 DDKNMVFESWLTPDAKGDKGYMQTPCNTPWRTIIVSDDARNILASRITLNLNEPCKIADA 318 Query: 319 ASWVKPVKYIGVWWDMITGKGSWAYTDELTSVKLGETDYSKTKPNGKHSANTANVKRYID 378 ASWVKPVKYIGVWWDMITGKGSWAYTDELTSVKLGETDYSKTKPNGKHSANTANVKRYID Sbjct: 319 ASWVKPVKYIGVWWDMITGKGSWAYTDELTSVKLGETDYSKTKPNGKHSANTANVKRYID 378 Query: 379 FAAAHGFDAVLVEGWNEGWEDWFGNSKDYVFDFVTPYPDFDVKEIHRYAARKGIKMMMHH 438 FAAAHGFDAVLVEGWNEGWEDWFGNSKDYVFDFVTPYPDFDVKEIHRYAARKGIKMMMHH Sbjct: 379 FAAAHGFDAVLVEGWNEGWEDWFGNSKDYVFDFVTPYPDFDVKEIHRYAARKGIKMMMHH 438 Query: 439 ETSASVRNYERHMDKAYQFMADNGYNSVKSGYVGNIIPRGEHHYGQWMNNHYLYAVKKAA 498 ETSASVRNYERHMDKAYQFMADNGYNSVKSGYVGNIIPRGEHHYGQWMNNHYLYAVKKAA Sbjct: 439 ETSASVRNYERHMDKAYQFMADNGYNSVKSGYVGNIIPRGEHHYGQWMNNHYLYAVKKAA 498 Query: 499 DYKIMVNAHEATRPTGICRTYPNLIGNESARGTEYESFGGNKVYHTTILPFTRLVGGPMD 558 DYKIMVNAHEATRPTGICRTYPNLIGNESARGTEYESFGGNKVYHTTILPFTRLVGGPMD Sbjct: 499 DYKIMVNAHEATRPTGICRTYPNLIGNESARGTEYESFGGNKVYHTTILPFTRLVGGPMD 558 Query: 559 YTPGIFETHCNKMNPANNSQVRSTIARQLALYVTMYSPLQMAADIPENYERFMDAFQFIK 618 YTPGIFETHCNKMNPANNSQVRSTIARQLALYVTMYSPLQMAADIPENYERFMDAFQFIK Sbjct: 559 YTPGIFETHCNKMNPANNSQVRSTIARQLALYVTMYSPLQMAADIPENYERFMDAFQFIK 618 Query: 619 DVALDWDETNYLEAEPGEYITIARKAKDTDDWYVGCTAGENGHTSKLVFDFLTPGKQYIA 678 DVALDWDETNYLEAEPGEYITIARKAKDTDDWYVGCTAGENGHTSKLVFDFLTPGKQYIA Sbjct: 619 DVALDWDETNYLEAEPGEYITIARKAKDTDDWYVGCTAGENGHTSKLVFDFLTPGKQYIA 678 Query: 679 TVYADAKDADWKENPQAYTIKKGILTNKSKLNLHAANGGGYAISIKEVKDKSEAKGLKRL 738 TVYADAKDADWKENPQAYTIKKGILTNKSKLNLHAANGGGYAISIKEVKDKSEAKGLKRL Sbjct: 679 TVYADAKDADWKENPQAYTIKKGILTNKSKLNLHAANGGGYAISIKEVKDKSEAKGLKRL 738 >5HQA-A nrPDB Length = 669 Score = 825 bits (2130), Expect = 0.0, Method: Composition-based stats. Identities = 286/724 (39%), Positives = 403/724 (55%), Gaps = 87/724 (12%) Query: 25 LTSPDNNLVMTFQVDSKGAPTYELTYKNKVVIKPSTLGLELKKEDNTRTDFDWVDRRDLT 84 + SPD N+ + D + P+Y +++KNK VI S LG E K+ Sbjct: 3 VQSPDGNIKIIIS-DEQSTPSYSISFKNKTVINNSALGFEFKQH---------------- 45 Query: 85 KLDSKTNLYDGFEVKDTQTATFDETWQPVWGEEKEIRNHYNELAVTLYQPM-NDRSIVIR 143 + F++ Q + + WQ WGE + + + +NE+ VT +P + +R Sbjct: 46 -----APFSNSFKITKVQQQSTNTQWQQPWGERQTVVDQHNEVTVTFAKPQPQGGTYSVR 100 Query: 144 FRLFNDGLGFRYEFPQQKSLNYFVIKEEHSQFGMNGDHIA--FWIPG-DYDTQEYDYTIS 200 F+ F+ G+GFRYE P+Q LN I +E ++F +N H A +WIP ++ EY Y + Sbjct: 101 FKAFDSGVGFRYEVPKQAGLNNIEITKELTEFAVNNSHTATAWWIPARGWNRYEYVYNTT 160 Query: 201 RLSEIRGLMKEAITPNSSQTPFSQTGVQTALMMKTDDGLYINLHEAALVDYSCMHLNLDD 260 L++ + TPF+ K DG++I++HEAALVDY+ M LN Sbjct: 161 PLNDAALV----------HTPFT---------FKNQDGVHISIHEAALVDYAAMVLN-QR 200 Query: 261 KNMVFESWLTPDAKGDKGYMQTPCNTPWRTIIVSDDARNILASRITLNLNEPCKIADAAS 320 + VF++ LTP + G Q NTPWRTI + + A +++ S I LNLNEP K+ D S Sbjct: 201 RPGVFQADLTPWSSGVAVKKQGAFNTPWRTIQIGEKAVDLVNSDIILNLNEPNKLGDV-S 259 Query: 321 WVKPVKYIGVWWDMITGKGSWAYTDELTSVKLGETDYSKTKPNGKHSANTANVKRYIDFA 380 WVKP KYIG+WW M +W D KH A T N K Y+DFA Sbjct: 260 WVKPGKYIGIWWGMHINTHTWGSGD-------------------KHGATTKNTKYYMDFA 300 Query: 381 AAHGFDAVLVEGWNEGWE-DWFGNSKDYVFDFVTPYPDFDVKEIHRYAARKGIKMMMHHE 439 A +GFD VLVEGWN GW+ DWF N VF F PY DFD+ + +Y+ + G++++ HHE Sbjct: 301 AKYGFDGVLVEGWNTGWDGDWFFNGD--VFSFTQPYDDFDIAALTKYSKQTGVQLIGHHE 358 Query: 440 TSASVRNYERHMDKAYQFMADNGYNSVKSGYVG----------NIIPRGEHHYGQWMNNH 489 TS +V NY + M A+ + + VK+GYV N I R E H GQ+M N Sbjct: 359 TSGNVSNYRKQMADAFALYEKSNVSQVKTGYVADGGNIKRIDKNGIARHEWHDGQFMVNE 418 Query: 490 YLYAVKKAADYKIMVNAHEATRPTGICRTYPNLIGNESARGTEYESFGG--NKVYHTTIL 547 YL+ VK AA +KI +N HE + TG+ RTYPN I E ARG E+ ++G N H ++L Sbjct: 419 YLHNVKLAAKHKISINTHEPIKDTGLRRTYPNWITREGARGQEFNAWGTPPNPPEHISML 478 Query: 548 PFTRLVGGPMDYTPGIFETHCNKMNPANNSQVRSTIARQLALYVTMYSPLQMAADIPENY 607 FTR++ GPMD+TPGIF+ N + AN ++ ++T+A+QLALYV +YSP+QMAAD+P+NY Sbjct: 479 AFTRMLAGPMDFTPGIFDLSFNGLG-ANTNRPQTTLAKQLALYVVLYSPIQMAADLPKNY 537 Query: 608 ERFMDAFQFIKDVALDWDETNYLEAEPGEYITIARKAKDTD-----DWYVGCTAGENGHT 662 DAFQFI+DV DW ++ L+ G++I ARK + D DWY+G E T Sbjct: 538 LAKPDAFQFIQDVPTDWQQSIALDGAVGDFIVFARKERKRDKYTGNDWYLGAVTDEQART 597 Query: 663 SKLVFDFLTPGKQYIATVYADAKDADWKENPQAYTIKKGILTNKSKLNLHAANGGGYAIS 722 ++ DFL GKQ+ A +Y D K+A+WK NP TI+K ++T KL L A GG AI Sbjct: 598 IEISLDFLDNGKQFEAHIYKDGKNAEWKNNPYDLTIEKRLVTASDKLTLKLATSGGTAIR 657 Query: 723 IKEV 726 K + Sbjct: 658 FKAL 661 >5XFM-A nrPDB Length = 642 Score = 728 bits (1879), Expect = 0.0, Method: Composition-based stats. Identities = 162/718 (22%), Positives = 275/718 (38%), Gaps = 123/718 (17%) Query: 25 LTSPDNNLVMTFQVDSKGAPTYELTYKNKVVIKPSTLGLELKKEDNTRTDFDWVDRRDLT 84 + PD L + V ++ P Y ++Y K +++ S LG+ D T+ Sbjct: 19 VKGPDEKLQLAVFVQNETKPCYSVSYNGKTMLEKSPLGMNTNIGDFTKN----------- 67 Query: 85 KLDSKTNLYDGFEVKDTQTATFDETWQPVWGEEKEIRNHYNELAVTLYQPMNDRSIVIRF 144 ++ D +Q + + NEL L + VI F Sbjct: 68 -----------LKLTGHSVDKIDTVYQQTRIKVSNVHYRANELTCHLENEQGQKLGVI-F 115 Query: 145 RLFNDGLGFRYEFPQQKSLNYFVIKEEHSQFGMNGDHIAFWIPGDYDTQEYDYTISRLSE 204 R+ ++ + FRY P Q +KEE + F F P + T E Sbjct: 116 RVSDNDVAFRYTLPHQGGKASVTVKEEQTGFRFPEQTTTFLCPQSDAMIGWKRTKPSYEE 175 Query: 205 IRGLMKEAITPNSSQTPFSQTGVQTALMMKTDDGLYINLHEAALVDYSCMHLNLDDKNMV 264 +A P S ++ + L +DG ++ + E + C D Sbjct: 176 ----EYKADAPMSDRSQYGHGYTFPCLFRIGNDG-WVLVSETGVDSRYCGSRLSDVSEGN 230 Query: 265 FESWLTPDAKGDKG------YMQTPCNTPWRTIIVSDDARNILASRITLNLNEPCKIADA 318 + P A+ + G P TPWRTI V D + I+ + + ++ P Sbjct: 231 LYTVAFPMAEENNGNGTVAPAFALPGATPWRTITVGDHLKPIVETTVPWDVVSP------ 284 Query: 319 ASWVKPVKYIGVWWDMITGKGSWAYTDELTSVKLGETDYSKTKPNGKHSANTANVKRYID 378 + K+ D G+G+W++ +G S N + RYID Sbjct: 285 ---LYETKH-----DYRFGRGTWSWI---------------LWQDG--SINYDDQVRYID 319 Query: 379 FAAAHGFDAVLVEGWNEGWEDWFGNSKDYVFDFVTPYPDFDVKEIHRYAARKGIKMMMHH 438 FA+A G++ L++ W W+ G+ + +K + YA KG+++ + + Sbjct: 320 FASAMGYEYALIDNW---WDTRIGHQR--------------MKSLVEYARDKGVELFLWY 362 Query: 439 ETSASVRNYER----HMDKA------YQFMADNGYNSVKSGYVGNIIPRGEHHYGQWMNN 488 +S + E+ MD A +++ G +K + G G Sbjct: 363 SSSGYWNDIEQGPVNRMDNAIIRKREMKWLQSLGVKGIKVDFFG----------GDKQET 412 Query: 489 HYLYA--VKKAADYKIMVNAHEATRPTGICRTYPNLIGNESARGTE----YESFGGNKVY 542 LY + A D+ +MV H T P G R YPN +G+E+ +E + F + + Sbjct: 413 MRLYEDILSDADDHGLMVIFHGCTLPRGWERMYPNYVGSEAVLASENMVFNQHFCDEEAF 472 Query: 543 HTTILPFTRLVGGPMDYTPGIFETHCNKMNPANNSQVRSTIARQLALYVTMYSPLQMAAD 602 +T + PF R G M++ + N+ N ++ R+T QLA V + +P+Q A Sbjct: 473 NTCLHPFIRNTVGSMEFGGCLLNKRLNRNNDGGTTR-RTTDVFQLATTVLLQNPVQNFAL 531 Query: 603 IPENYERFM-DAFQFIKDVALDWDETNYLEAEPGEYITIARKAKDTDDWYVGCT-AGENG 660 P N + F+K V WDET +++ PG+Y+ +AR+ DT WY+ AG+ Sbjct: 532 APNNLKDVPAVCMDFMKRVPTTWDETRFVDGYPGKYVVLARRQGDT--WYLAAVNAGKEP 589 Query: 661 HTSKLVFDFLTPGKQYIATVYADAKDADWKENPQAYTIKKGILTNKSKLNLHAANGGG 718 KL + GK +Y D K K P+ ++K + K+ L GG Sbjct: 590 LKLKLDLEMFA-GK--TVALYKDDK----KGEPELTSLK---VKENGKVQLEIRPQGG 637 >3A24-A nrPDB Length = 641 Score = 722 bits (1864), Expect = 0.0, Method: Composition-based stats. Identities = 198/738 (26%), Positives = 320/738 (43%), Gaps = 142/738 (19%) Query: 27 SPDNNLVMTFQVDSKGAPTYELTYKNKVVIKPSTLGLELKKEDNTRTDFDWVDRRDLTKL 86 SPD NL T + + TY++T + ++ PS + + L Sbjct: 6 SPDGNLKTTITIGDR--LTYDITCNGRQILTPSPISM---------------------TL 42 Query: 87 DSKTNLYDGFEVKDTQTATFDETWQPVWGEEKEIRNHYNELAVTLYQPMNDRSIVIRFRL 146 D+ T + ++ T + DE + E+RNHYN L + + N + FR Sbjct: 43 DNGTVWGENAKLSGTSRKSVDEMIPSPFYRASELRNHYNGLTLRFKKDWN-----VEFRA 97 Query: 147 FNDGLGFRYEFPQQKSLNYFVIKEEHSQFGMNGDHIAFWIP-------GDYDTQ-----E 194 +NDG+ +R+ +K F + E S + D A +P GDY++Q E Sbjct: 98 YNDGIAYRFVNQGKKP---FRVVTEVSDYCFPSDMTAS-VPYVKSGKDGDYNSQFFNSFE 153 Query: 195 YDYTISRLSEIRGLMKEAITPNSSQTPFSQTGVQTALMMKTDDGLYINLHEAALVDYSCM 254 YT +LS++ N + F L++ DG+ + + E+ L +Y + Sbjct: 154 NTYTTDKLSKL----------NKQRLMF------LPLVVDAGDGVKVCITESDLENYPGL 197 Query: 255 HLNLDDKNMVFESWLTPDAK----GDKGYMQT--------------PCNTPWRTIIVSDD 296 +L+ + S P K G +Q P N PWR +V+ Sbjct: 198 YLSASEGANRLSSMHAPYPKRTVQGGHNQLQMLVKEHEDYIAKVDKPRNFPWRIAVVTTT 257 Query: 297 ARNILASRITLNLNEPCKIADAASWVKPVKYIGVWWDMITGKGSWAYTDELTSVKLGETD 356 +++ A+ ++ L P +++D SW+KP K WW+ G D +T V Sbjct: 258 DKDLAATNLSYLLGAPSRMSDL-SWIKPGKVAWDWWNDWNLDG----VDFVTGV------ 306 Query: 357 YSKTKPNGKHSANTANVKRYIDFAAAHGFDAVLVEGWNEGWEDWFGNSKDYVFDFVTPYP 416 N K YIDFA+A+G + V+++ EGW + + D + Sbjct: 307 ------------NNPTYKAYIDFASANGIEYVILD---EGW------AVNLQADLMQVVK 345 Query: 417 DFDVKEIHRYAARKGIKMMMHHETSASVRNYERHMDKAYQFMADNGYNSVKSGYVGNIIP 476 + D+KE+ YAA K + +++ A +ER M+ + A+ G G+ + + Sbjct: 346 EIDLKELVDYAASKNVGIILW----AGYHAFERDMENVCRHYAEMGVK----GFKVDFMD 397 Query: 477 RGEHHYGQWMNNHYLYAVKKAADYKIMVNAHEATRPTGICRTYPNLIGNESARGTE---Y 533 R + Q M A + A YK++++ H +P G+ RTYPN++ E G E + Sbjct: 398 RDD----QEMTAFNYRAAEMCAKYKLILDLHGTHKPAGLNRTYPNVLNFEGVNGLEQMKW 453 Query: 534 ESFGGNKVYHTTILPFTRLVGGPMDYTPGIFE--THCNKMNPANNSQVRSTIARQLALYV 591 S ++V + ++PF R V GPMDYT G + N + + T RQLALYV Sbjct: 454 SSPSVDQVKYDVMIPFIRQVSGPMDYTQGAMRNASKGNYYPCYSEPMSQGTRCRQLALYV 513 Query: 592 TMYSPLQMAADIPENYERFMDAFQFIKDVALDWDETNYLEAEPGEYITIARKAKDTDDWY 651 SP M D P NY R ++ FI ++ WDE+ L+ + GEYI AR+ D WY Sbjct: 514 VFESPFNMLCDTPSNYMREPESTAFIAEIPTVWDESIVLDGKMGEYIVTARRKGDV--WY 571 Query: 652 VGCTAGENGHTSKLVFDFLTPGKQYIATVYADAKDA-----DWKENPQAYTIKKGILTNK 706 VG + ++ FL K Y AT++ D +A D+K +++ IKK Sbjct: 572 VGGITDWSARDIEVDCSFLG-DKSYHATLFKDGVNAHRAGRDYK--CESFPIKK-----D 623 Query: 707 SKLNLHAANGGGYAISIK 724 KL +H A GGG+A+ IK Sbjct: 624 GKLKVHLAPGGGFALKIK 641 >4C7D-A nrPDB Length = 494 Score = 38.7 bits (88), Expect = 0.009, Method: Composition-based stats. Identities = 29/162 (17%), Positives = 52/162 (32%), Gaps = 25/162 (15%) Query: 339 GSWAYTDELTSVKLGETDYSKTKPNGKHSANTANVKRYIDFAAAHGFDAVLV-----EGW 393 G W S +H + VKRYID A + ++ + + +GW Sbjct: 124 GPWLVAGGTIEDTPRYAWRSAMLDVSRHFFSVDEVKRYIDRVALYKYNKLHLHISDDQGW 183 Query: 394 NEGWEDW-----FGNSKDYVFDFVTPYPDFDVKEIHRYAARKGIKMMMHHETSASVRNYE 448 + W +G S + Y D +EI RYAA + ++++ + Sbjct: 184 RLAIDSWPRLATYGGSTEVGGGPGGHYTKADYEEIVRYAASRHLEVVPEIDMPGHTNA-- 241 Query: 449 RHMDKAYQFMADNG--------YNSVKSGYVGNIIPRGEHHY 482 A A+ Y K G+ + + + Sbjct: 242 -----ALASYAELNCDGVAPPLYTGTKVGFSTLCVDKDVTYD 278 >1HP5-A nrPDB Length = 512 Score = 38.7 bits (88), Expect = 0.009, Method: Composition-based stats. Identities = 29/162 (17%), Positives = 51/162 (31%), Gaps = 25/162 (15%) Query: 339 GSWAYTDELTSVKLGETDYSKTKPNGKHSANTANVKRYIDFAAAHGFDAVLV-----EGW 393 G W S +H VKRYID A + ++ + + +GW Sbjct: 142 GPWLVAGGTIEDTPRYAWRSAMLDVSRHFFGVDEVKRYIDRVARYKYNKLHLHLSDDQGW 201 Query: 394 NEGWEDW-----FGNSKDYVFDFVTPYPDFDVKEIHRYAARKGIKMMMHHETSASVRNYE 448 + W +G S + Y + KEI RYAA + ++++ + Sbjct: 202 RIAIDSWPRLATYGGSTEVGGGPGGYYTKAEYKEIVRYAASRHLEVVPEIDMPGHTNA-- 259 Query: 449 RHMDKAYQFMADNG--------YNSVKSGYVGNIIPRGEHHY 482 A A+ Y K G+ + + + Sbjct: 260 -----ALASYAELNCDGVAPPLYTGTKVGFSSLCVDKDVTYD 296 >2YLL-A nrPDB Length = 454 Score = 35.6 bits (80), Expect = 0.081, Method: Composition-based stats. Identities = 24/120 (20%), Positives = 40/120 (33%), Gaps = 22/120 (18%) Query: 417 DFDVKEIHRYAARKGIKMMMHHETSASVRNYERHMDKAYQFMADNGYNSVKSGYVGNIIP 476 + + ++ YA KGI ++ + HMD M + G + Y G Sbjct: 111 ESQMTDLINYAKDKGIGLIPTVNSPG-------HMDAILNAMKELGIQNPNFSYFGKKSA 163 Query: 477 RGEHHYGQWMNNHY--------LYAVKKAADYKIMVN--AHEATRPTGI-----CRTYPN 521 R + Y KK + I ++ A++AT G + YPN Sbjct: 164 RTVDLDNEQAVAFTKALIDKYAAYFAKKTEIFNIGLDEYANDATDAKGWSVLQADKYYPN 223 >1DLI-A nrPDB Length = 402 Score = 34.1 bits (76), Expect = 0.21, Method: Composition-based stats. Identities = 42/271 (15%), Positives = 92/271 (33%), Gaps = 33/271 (12%) Query: 15 ISFIANAQQKLTSPDNNLVMTFQVDSKGAPTYELTYKNKVVIKPSTLGLELKKEDNTRTD 74 I FI +QK + + ++ + + + Y+ Y PS + + ++ D+ + Sbjct: 121 IGFITEMRQKFQT--DRIIFSPEFLRESKALYDNLY-------PSRIIVSCEENDSPKVK 171 Query: 75 FDWVDRRDLTKLDSKTNLYDGFEVKDTQTATFDETWQPVWGEEKEIRNHYNELAVTLYQP 134 D L K +K N + A + + + + ++NEL Sbjct: 172 ADAEKFALLLKSAAKKNNVPVL-IMGASEAEAVKLFANTYLALR--VAYFNELDTYAESR 228 Query: 135 MNDRSIVIRFRLFNDGLGFRYEFPQQKSLNYFVIKEEHSQFGMNGDHIAFW-----IPGD 189 + ++I+ ++D +G Y P + + + D IP Sbjct: 229 KLNSHMIIQGISYDDRIGMHYNNPSFG----------YGGYCLPKDTKQLLANYNNIPQT 278 Query: 190 YDTQEYDYTISRLSEIRGLMKEAITPNSSQTPFSQTGVQTALMMKTDDGLYINLHEAALV 249 E + + + + + ++P GV +M D N E+A+ Sbjct: 279 --LIEAIVSSNNVRKSYIAKQIINVLKEQESPVKVVGVYRLIMKSNSD----NFRESAIK 332 Query: 250 DYSCMHLNLDDKNMVFESWLTPDAKGDKGYM 280 D + + D K +++E L D+ + Sbjct: 333 DVIDILKSKDIKIIIYEPMLNKLESEDQSVL 363 >2E9C-A nrPDB Length = 253 Score = 34.1 bits (76), Expect = 0.25, Method: Composition-based stats. Identities = 29/151 (19%), Positives = 54/151 (35%), Gaps = 18/151 (11%) Query: 366 HSANTANVKRYIDFAAAHGFDAVLV-----EGWNEGWEDWFGNSKDYVFDFVTPYPDFDV 420 H A +V+R + FAA +G +A+ + E WN + + D +V Sbjct: 43 HKAGAKSVRRAVSFAANNGIEALTLYAFSSENWN-----RPAQEVSALMELFVWALDSEV 97 Query: 421 KEIHRYAARKGIKMMMHHETSASVRNYERHMDKAYQFMADNGYNSVKSGYVGNIIPRGEH 480 K +HR+ +++ + +TS + + K+ A G + N R + Sbjct: 98 KSLHRH----NVRLRIIGDTSRFNSRLQERIRKSEALTA--GNTGLTLNIAANYGGRWDI 151 Query: 481 HYGQWMNNHYLYAVKKAADY--KIMVNAHEA 509 G + D + M+N H Sbjct: 152 VQGVRQLAEKVQQGNLQPDQIDEEMLNQHVC 182 >1W78-A nrPDB Length = 422 Score = 33.7 bits (75), Expect = 0.32, Method: Composition-based stats. Identities = 18/55 (32%), Positives = 25/55 (45%), Gaps = 1/55 (1%) Query: 639 TIARKAKDTDDWYVGCTAGENGHTSKLVFDFLTPGKQYIATVYA-DAKDADWKEN 692 T+A DDWY G G T++ + + L GK + + A DA AD K Sbjct: 341 TLAWLKSVVDDWYCAPLEGPRGATAEQLLEHLGNGKSFDSVAQAWDAAMADAKAE 395 >4B2O-A nrPDB Length = 286 Score = 32.6 bits (72), Expect = 0.65, Method: Composition-based stats. Identities = 15/58 (25%), Positives = 22/58 (37%), Gaps = 3/58 (5%) Query: 592 TMYSPLQMAADI---PENYERFMDAFQFIKDVALDWDETNYLEAEPGEYITIARKAKD 646 +S +Q AD + + F FI DV N+ E PG+ IT + Sbjct: 51 IYHSLIQSGADAITMGNHTWDKKEIFDFIDDVPNLVRPANFPEGTPGKGITYVKANGK 108 >5OAR-B nrPDB Length = 499 Score = 30.2 bits (66), Expect = 3.2, Method: Composition-based stats. Identities = 13/59 (22%), Positives = 24/59 (40%), Gaps = 4/59 (6%) Query: 397 WEDWFGNSKDYVFDFVTPYPDFDVKEIHRYAARKGIKMM----MHHETSASVRNYERHM 451 W D + + Y DV+ I YA +GI+++ M +S+ + + M Sbjct: 128 WVDVYPEMVKDAYSPHEIYSRNDVRNIVNYARARGIRVIPEIDMPSHSSSGWKQVDPEM 186 >5H05-A nrPDB Length = 640 Score = 29.5 bits (64), Expect = 6.0, Method: Composition-based stats. Identities = 8/41 (19%), Positives = 16/41 (39%) Query: 592 TMYSPLQMAADIPENYERFMDAFQFIKDVALDWDETNYLEA 632 + SP N + ++ F ++VA W E ++ Sbjct: 135 VVPSPEGRLPVGENNPVSYPESLAFYQEVATFWIEELKIDG 175 Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta Posted date: Jan 3, 2023 9:05 PM Number of letters in database: 10,336,785 Number of sequences in database: 36,641 Lambda K H 0.305 0.115 0.294 Lambda K H 0.267 0.0356 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 25,454,528 Number of Sequences: 36641 Number of extensions: 988087 Number of successful extensions: 2915 Number of sequences better than 10.0: 14 Number of HSP's better than 10.0 without gapping: 13 Number of HSP's successfully gapped in prelim test: 29 Number of HSP's that attempted gapping in prelim test: 2820 Number of HSP's gapped (non-prelim): 50 length of query: 738 length of database: 10,336,785 effective HSP length: 104 effective length of query: 634 effective length of database: 6,526,121 effective search space: 4137560714 effective search space used: 4137560714 T: 11 A: 40 X1: 16 ( 7.0 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.2 bits) S2: 62 (28.7 bits)