BLASTP 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Reference for composition-based statistics starting in round 2:
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,
Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005.
Query= G1UH28
(299 letters)
Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta
36,641 sequences; 10,336,785 total letters
Searching..................................................done
Results from round 1
Score E
Sequences producing significant alignments: (bits) Value
4TOQ-A nrPDB 561 e-160
1KQY-A nrPDB 362 e-100
2GSJ-A nrPDB 346 6e-96
6IDN-A nrPDB 296 1e-80
3D5H-A nrPDB 271 2e-73
3MU7-A nrPDB 259 7e-70
4B15-A nrPDB 186 1e-47
6GWA-A nrPDB 183 6e-47
4TXE-A nrPDB 153 7e-38
1OM0-A nrPDB 148 2e-36
2XVP-A nrPDB 123 7e-29
3EBV-A nrPDB 65 5e-11
4TX8-A nrPDB 55 4e-08
3UTO-A nrPDB 36 0.023
3IAN-A nrPDB 32 0.24
3N18-A nrPDB 30 1.5
3J81-k nrPDB 30 1.5
5A9Q-8 nrPDB 30 1.5
1EOM-A nrPDB 29 2.5
4AXN-A nrPDB 28 3.4
3SIM-A nrPDB 28 4.0
5TKY-A nrPDB 28 4.7
3QOK-A nrPDB 27 8.8
4W5U-B nrPDB 27 10.0
>4TOQ-A nrPDB
Length = 273
Score = 561 bits (1446), Expect = e-160, Method: Compositional matrix adjust.
Identities = 273/273 (100%), Positives = 273/273 (100%)
Query: 27 GDIAIYWGQNGGEGTLASTCDTGRYAYVIVSFVTTFGNFRAPVVNLAGHCDPAAGTCTGL 86
GDIAIYWGQNGGEGTLASTCDTGRYAYVIVSFVTTFGNFRAPVVNLAGHCDPAAGTCTGL
Sbjct: 1 GDIAIYWGQNGGEGTLASTCDTGRYAYVIVSFVTTFGNFRAPVVNLAGHCDPAAGTCTGL 60
Query: 87 SDEIRSCQGKDIKVLMSIGGGAGDYSLVSEADADNFADYLWNNFLGGQSSSRPLGDAVLD 146
SDEIRSCQGKDIKVLMSIGGGAGDYSLVSEADADNFADYLWNNFLGGQSSSRPLGDAVLD
Sbjct: 61 SDEIRSCQGKDIKVLMSIGGGAGDYSLVSEADADNFADYLWNNFLGGQSSSRPLGDAVLD 120
Query: 147 GIDFDIELGTTTFYDTLARALSSRSTQAAKVYLTAAPQCPHPDSHLDAALNTGLFDNVWI 206
GIDFDIELGTTTFYDTLARALSSRSTQAAKVYLTAAPQCPHPDSHLDAALNTGLFDNVWI
Sbjct: 121 GIDFDIELGTTTFYDTLARALSSRSTQAAKVYLTAAPQCPHPDSHLDAALNTGLFDNVWI 180
Query: 207 QFYNNPLAQCQYSSGNTNDILSSWNTWTSSTTAGKIFLGLPAAPEAAGSGYIPPDVLTGQ 266
QFYNNPLAQCQYSSGNTNDILSSWNTWTSSTTAGKIFLGLPAAPEAAGSGYIPPDVLTGQ
Sbjct: 181 QFYNNPLAQCQYSSGNTNDILSSWNTWTSSTTAGKIFLGLPAAPEAAGSGYIPPDVLTGQ 240
Query: 267 ILPQIKTSAKYGGVMLYSKFYDTTYSTTIKDQV 299
ILPQIKTSAKYGGVMLYSKFYDTTYSTTIKDQV
Sbjct: 241 ILPQIKTSAKYGGVMLYSKFYDTTYSTTIKDQV 273
>1KQY-A nrPDB
Length = 273
Score = 362 bits (928), Expect = e-100, Method: Compositional matrix adjust.
Identities = 187/275 (68%), Positives = 221/275 (80%), Gaps = 4/275 (1%)
Query: 27 GDIAIYWGQNGGEGTLASTCDTGRYAYVIVSFVTTFGNFRAPVVNLAGHCDPAAGTCTGL 86
G IAIYWGQNG EGTL TC T +Y+YV ++F+ FGN + P +NLAGHC+PAAG CT +
Sbjct: 1 GGIAIYWGQNGNEGTLTQTCSTRKYSYVNIAFLNKFGNGQTPQINLAGHCNPAAGGCTIV 60
Query: 87 SDEIRSCQGKDIKVLMSIGGGAGDYSLVSEADADNFADYLWNNFLGGQSSSRPLGDAVLD 146
S+ IRSCQ + IKV++S+GGG G Y+L S+ADA N ADYLWNNFLGG+SSSRPLGDAVLD
Sbjct: 61 SNGIRSCQIQGIKVMLSLGGGIGSYTLASQADAKNVADYLWNNFLGGKSSSRPLGDAVLD 120
Query: 147 GIDFDIELGTTTFYDTLARALSSRSTQAAKVYLTAAPQCPHPDSHLDAALNTGLFDNVWI 206
GIDF I G+T ++D LAR LS+ S Q KVYLTAAPQCP PD +L ALNTGLFD VW+
Sbjct: 121 GIDFAIAHGSTLYWDDLARYLSAYSKQGKKVYLTAAPQCPFPDRYLGTALNTGLFDYVWV 180
Query: 207 QFYNNPLAQCQYSSGNTNDILSSWNTWTSSTTAGKIFLGLPAAPEAAGSGYIPPDVLTGQ 266
QF+NNP CQYSSGN N+I++SWN WT+S AGKIFLGLPAAPEAAGSGY+PPDVL +
Sbjct: 181 QFFNNP--PCQYSSGNINNIINSWNRWTTSINAGKIFLGLPAAPEAAGSGYVPPDVLISR 238
Query: 267 ILPQIKTSAKYGGVMLYSKFYDTT--YSTTIKDQV 299
ILP+IK S KYGGVML+SKFYD YS++I D V
Sbjct: 239 ILPEIKKSPKYGGVMLWSKFYDDKNGYSSSILDSV 273
>2GSJ-A nrPDB
Length = 271
Score = 346 bits (888), Expect = 6e-96, Method: Compositional matrix adjust.
Identities = 168/275 (61%), Positives = 207/275 (75%), Gaps = 6/275 (2%)
Query: 27 GDIAIYWGQNGGEGTLASTCDTGRYAYVIVSFVTTFGNFRAPVVNLAGHCDPAAGTCTGL 86
G I +YWGQNGGEGTL STC++G Y V ++F++ FG R P +NLAGHCDPA C +
Sbjct: 1 GGIVVYWGQNGGEGTLTSTCESGLYQIVNIAFLSQFGGGRRPQINLAGHCDPANNGCRTV 60
Query: 87 SDEIRSCQGKDIKVLMSIGGGAGDYSLVSEADADNFADYLWNNFLGGQSSSRPLGDAVLD 146
SD IR+CQ + IKV++SIGGGAG YSL S DA + ADY+WNNFLGG+SSSRPLGDAVLD
Sbjct: 61 SDGIRACQRRGIKVMLSIGGGAGSYSLSSVQDARSVADYIWNNFLGGRSSSRPLGDAVLD 120
Query: 147 GIDFDIELGTTTFYDTLARALSSRSTQAAKVYLTAAPQCPHPDSHLDAALNTGLFDNVWI 206
G+DFDIE G +YD LAR LS + KV+L+AAPQCP PD L+ AL+TGLFD VW+
Sbjct: 121 GVDFDIEHG-GAYYDALARRLSEHNRGGKKVFLSAAPQCPFPDQSLNKALSTGLFDYVWV 179
Query: 207 QFYNNPLAQCQYSSGNTNDILSSWNTWTSSTTAGKIFLGLPAAPEAAGSGYIPPDVLTGQ 266
QFYNNP QC+++SGN ++ +SWN WTSS A K ++GLPA+PEAAGSGY+PP L Q
Sbjct: 180 QFYNNP--QCEFNSGNPSNFRNSWNKWTSSFNA-KFYVGLPASPEAAGSGYVPPQQLINQ 236
Query: 267 ILPQIKTSAKYGGVMLYSKFYD--TTYSTTIKDQV 299
+LP +K S KYGGVML+ +F D T YS+ IK V
Sbjct: 237 VLPFVKRSPKYGGVMLWDRFNDLKTKYSSKIKPSV 271
>6IDN-A nrPDB
Length = 272
Score = 296 bits (757), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 153/277 (55%), Positives = 188/277 (67%), Gaps = 9/277 (3%)
Query: 27 GDIAIYWGQNGGEGTLASTCDTGRYAYVIVSFVTTFGNFRAPVVNLAGHCDPAAGTCTGL 86
G+IAIYWGQ+GGEG+L TCDT Y + + F+TTFG+ P++NL HC+PA C L
Sbjct: 1 GEIAIYWGQDGGEGSLRETCDTDDYDIINIGFLTTFGHSTTPILNLTKHCNPATSACKFL 60
Query: 87 SDEIRSCQGKDIKVLMSIGGGAGDYSLVSEADADNFADYLWNNFLGGQSSSRPLGDAVLD 146
S EI C+ K IKV +S+GGG G+Y L S DA + A YLWNNFLGGQS SRPLGD LD
Sbjct: 61 SSEISYCKSKGIKVFLSLGGGTGNYYLSSRDDAASVAQYLWNNFLGGQSESRPLGDESLD 120
Query: 147 GIDFDIELGTTTFYDTLARA---LSSRSTQAAKVYLTAAPQCPHPDSHLDAALNTGLFDN 203
GIDFDIE G+ +YDTLA L RS + VYL AAP C PD +L A+NT LFD
Sbjct: 121 GIDFDIEDGSNDYYDTLAEQLWILGGRS--GSNVYLAAAPACEFPDYYLREAINTSLFDY 178
Query: 204 VWIQFYNNPLAQCQYSSGNTNDILSSWNTWTSSTTAGKIFLGLPAAPEAA-GSGYIPPDV 262
VW+QFYNNP +C Y GN ++L+SWN S+ +FLGLPAAP+AA G G+I D
Sbjct: 179 VWVQFYNNP--RCHY-LGNATNLLNSWNNDWSTILTDDLFLGLPAAPQAAPGGGFIEADD 235
Query: 263 LTGQILPQIKTSAKYGGVMLYSKFYDTTYSTTIKDQV 299
L ++LP IK + YGGVML+SK+YD YS+ IK V
Sbjct: 236 LISEVLPTIKATYDYGGVMLWSKYYDDDYSSKIKPDV 272
>3D5H-A nrPDB
Length = 272
Score = 271 bits (694), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 131/271 (48%), Positives = 180/271 (66%), Gaps = 10/271 (3%)
Query: 28 DIAIYWGQNGGEGTLASTCDTGRYAYVIVSFVTTFGNFRAPVVNLAGHCDPAAGTCTGLS 87
DIA+YWGQN E +L +TCDTG YAYVI+ F+ TFG + P ++++GH + +GL
Sbjct: 4 DIAVYWGQNFDERSLEATCDTGNYAYVIIGFLNTFGGGQTPALDISGH------SPSGLE 57
Query: 88 DEIRSCQGKDIKVLMSIGGGAGDYSLVSEADADNFADYLWNNFL--GGQSSSRPLGDAVL 145
+I+ CQ K++KVL+SIGG G YSL S +DA++ A YL+NNFL G S +RP G+AVL
Sbjct: 58 PQIKHCQSKNVKVLLSIGGPKGPYSLDSRSDANDLAVYLFNNFLLPPGHSENRPFGNAVL 117
Query: 146 DGIDFDIELGTTTFYDTLARALSSRSTQAAKVYLTAAPQCPHPDSHLDAALNTGLFDNVW 205
DGIDF IE G + Y LA LSS + LTAAPQC +PD +L +N+ FD +W
Sbjct: 118 DGIDFHIEHGGPSQYQLLANILSSFRLAGTEFALTAAPQCVYPDPNLGTVINSATFDAIW 177
Query: 206 IQFYNNPLAQCQYSSGNTNDILSSWNTWTSSTTAGKIFLGLPAAPEAAGSGYIPPDVLTG 265
+QFYNNP QC YSSGN ++++W W+ K+FLG PA P+AAGSGY+PP+ +
Sbjct: 178 VQFYNNP--QCSYSSGNAEALMNAWREWSMKARTKKVFLGFPAHPDAAGSGYMPPEKVKF 235
Query: 266 QILPQIKTSAKYGGVMLYSKFYDTTYSTTIK 296
+ P K S K+GG+ML+ ++DT + + K
Sbjct: 236 HVFPAAKKSYKFGGIMLWDSYWDTVSNFSSK 266
>3MU7-A nrPDB
Length = 273
Score = 259 bits (663), Expect = 7e-70, Method: Compositional matrix adjust.
Identities = 126/266 (47%), Positives = 174/266 (65%), Gaps = 11/266 (4%)
Query: 28 DIAIYWGQNGGEGTLASTCDTGRYAYVIVSFVTTFGNFRAPVVNLAGHCDPAAGTCTGLS 87
DIA+YWGQ+ E +L +TCD+G YAYVI+ F+ TFG + P ++++GH + GL
Sbjct: 4 DIAVYWGQSFDERSLEATCDSGNYAYVIIGFLNTFGGGQTPALDISGH------SPKGLE 57
Query: 88 DEIRSCQGKDIKVLMSIGGGAGDYSLVSEADADNFADYLWNNFL---GGQSSSRPLGDAV 144
+I+ CQ K++KVL+SIGG AG YSL S DA++ A YL NFL G S SRP G+AV
Sbjct: 58 PQIKHCQSKNVKVLLSIGGPAGPYSLDSRNDANDLAVYLHKNFLLPPAGTSESRPFGNAV 117
Query: 145 LDGIDFDIELGTTTFYDTLARALSSRSTQAAKVYLTAAPQCPHPDSHLDAALNTGLFDNV 204
LDGIDF IE G + Y LA LSS ++ LTAAPQC +PD +L +N+ FD +
Sbjct: 118 LDGIDFHIEHGGPSQYQLLANILSSFRLSGSEFALTAAPQCVYPDPNLGTVINSATFDAI 177
Query: 205 WIQFYNNPLAQCQYSSGNTNDILSSWNTWTSSTTAGKIFLGLPAAPEAAGSGYIPPDVLT 264
W+QFYNNP QC YS+ N + ++++W W+ K+FLG PA P+AAGSGY+PP +
Sbjct: 178 WVQFYNNP--QCSYSASNASALMNAWKEWSMKARTDKVFLGFPAHPDAAGSGYMPPTKVK 235
Query: 265 GQILPQIKTSAKYGGVMLYSKFYDTT 290
+ P + S K+GG+ML+ ++DT
Sbjct: 236 FSVFPNAQDSTKFGGIMLWDSYWDTV 261
>4B15-A nrPDB
Length = 266
Score = 186 bits (472), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 102/276 (36%), Positives = 155/276 (56%), Gaps = 18/276 (6%)
Query: 27 GDIAIYWGQNGG---EGTLASTCDTGRYAYVIVSFVTTFGNFRAPVVNLAGHCDPAAGTC 83
G+I +YWGQ G EG+L C +G Y +++ + T+ N R P +NL HC C
Sbjct: 2 GNIVVYWGQGGSDNSEGSLKEACKSGHYNMIVLEELITYDNGRDPDLNLGAHC----VNC 57
Query: 84 TGLSDEIRSCQGKDIKVLMSIGGGAGDYSLVSEADADNFADYLWNNFLGGQSSSRPLGDA 143
T L EI+ CQ K IK+L+ IG + D + YL +NF G+S PLG+
Sbjct: 58 TSLQQEIKYCQLKLIKILLQIGQVTPTKEDTKDTTKD-LSQYLDSNFFSGKSG--PLGEV 114
Query: 144 VLDGIDF-DIELGTTTFYDTLARALSSRSTQAAKVYLTAAPQCPHPDSHLDAALNTGLFD 202
LDGID + G +D L +AL+ +T + ++YL+A+P C +PD +LD A+ T D
Sbjct: 115 YLDGIDIASVPEGLNLKFDELVQALNDSAT-SRRIYLSASPNCVYPDYYLDKAIQTQKLD 173
Query: 203 NVWIQFYNNPLAQCQYSSGNTNDILSSWNTWTSSTTAGKIFLGLPAAPEAAGSGYIPPDV 262
+++QF+ C Y+ G D+ + TWTS+ KIF+ LPA P+ +GYIPP V
Sbjct: 174 FLFVQFFY--ALPCIYTQGLPEDLFQAMKTWTSNVPESKIFMALPATPDL--NGYIPPRV 229
Query: 263 LTGQILPQIKTSAKYGGVMLYSKFYD--TTYSTTIK 296
L +ILP + ++ + GVM++ +++D YS+ IK
Sbjct: 230 LNKEILPAVTQASNFAGVMIFDRYFDRFRKYSSKIK 265
>6GWA-A nrPDB
Length = 299
Score = 183 bits (465), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 111/282 (39%), Positives = 154/282 (54%), Gaps = 14/282 (4%)
Query: 24 ISAGDIAIYWGQNGGEGTLASTCDTGRYAYVIVSFVTTFG-NFRAPVVNLAGHCDPAAGT 82
IS+ +IA+YWGQ +G L TC T Y V +SF+ FG R P + L G C P+ G
Sbjct: 2 ISSTEIAVYWGQRE-DGLLRDTCKTNNYKIVFISFLDKFGCEIRKPELELEGVCGPSVGN 60
Query: 83 -CTGLSDEIRSCQGKDIKVLMSIGGGAGDYSLVSEADADNFADYLWNNFLGGQSSSRPLG 141
C+ L +I+ CQ +KV +++GG G YS S A + A+YL FL + PLG
Sbjct: 61 PCSFLESQIKECQRMGVKVFLALGGPKGTYSACSADYAKDLAEYLHTYFLSERREG-PLG 119
Query: 142 DAVLDGIDFDIELGTTTF-YDTLARALSS-RSTQAAKVYLTAAPQCPHPDSHLDAALNTG 199
LDGI FDI+ +D L L + + L+AAP C PD +LD A+ T
Sbjct: 120 KVALDGIHFDIQKPVDELNWDNLLEELYQIKDVYQSTFLLSAAPGCLSPDEYLDNAIQTR 179
Query: 200 LFDNVWIQFYNNPLAQCQYSSGNTNDILSSWNTWTSSTTA--GKIFLGLPAAPEAA-GSG 256
FD ++++FYN+ CQYS+GN I ++W +WT S +FL LPA+ A G G
Sbjct: 180 HFDYIFVRFYND--RSCQYSTGNIQRIRNAWLSWTKSVYPRDKNLFLELPASQATAPGGG 237
Query: 257 YIPPDVLTGQILPQI-KTSAKYGGVMLYSKFYD--TTYSTTI 295
YIPP L GQ+LP + +Y G+ L+++ D T YST I
Sbjct: 238 YIPPSALIGQVLPYLPDLQTRYAGIALWNRQADKETGYSTNI 279
>4TXE-A nrPDB
Length = 294
Score = 153 bits (387), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 99/270 (36%), Positives = 140/270 (51%), Gaps = 26/270 (9%)
Query: 28 DIAIYWGQN--GGEGTLASTCDTGRYAYVIVSFVTTFGNFRAPVVNLAGHCDPAAGT--- 82
+IA+YWGQN G + +LA+ C++ ++SF+ F +N A C
Sbjct: 7 NIAVYWGQNSAGTQESLATYCESSDADIFLLSFLNQFPTLG---LNFANACSDTFSDGLL 63
Query: 83 -CTGLSDEIRSCQGKDIKVLMSIGGGAGDYSLVSEADADNFADYLWNNF-LGGQSSSRPL 140
CT ++++I +CQ KVL+S+GG +G Y ++ A+ FA LW+ F G +S RP
Sbjct: 64 HCTQIAEDIETCQSLGKKVLLSLGGASGSYLFSDDSQAETFAQTLWDTFGEGTGASERPF 123
Query: 141 GDAVLDGIDFDIELGTTTFYDTLARALSSRSTQAAK-VYLTAAPQCPHPDSHLDAALNTG 199
AV+DG DFDIE Y LA L + + K YL+AAPQCP+PD+ + L
Sbjct: 124 DSAVVDGFDFDIENNNEVGYSALATKLRTLFAEGTKQYYLSAAPQCPYPDASVGDLLENA 183
Query: 200 LFDNVWIQFYNNPLAQCQYSSGNTNDILSSWNTW------TSSTTAGKIFLGLPAAPEAA 253
D +IQFYNN C SG N W+TW S K+FLGLP + AA
Sbjct: 184 DIDFAFIQFYNN---YCSV-SGQFN-----WDTWLTYAQTVSPNKNIKLFLGLPGSASAA 234
Query: 254 GSGYIPPDVLTGQILPQIKTSAKYGGVMLY 283
GSGYI L + I +S+ +GG+ L+
Sbjct: 235 GSGYISDTSLLESTIADIASSSSFGGIALW 264
>1OM0-A nrPDB
Length = 274
Score = 148 bits (374), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 95/279 (34%), Positives = 149/279 (53%), Gaps = 22/279 (7%)
Query: 27 GDIAIYWGQNGGEGTLASTCDTGRYAYVIVSFVTTFGNFRAPVVNLAGHCDPAAGTCTGL 86
G + ++WG+N EG+L CD+G Y V +SF+ FG ++L+GH + G
Sbjct: 6 GQVTVFWGRNKAEGSLREACDSGMYTMVTMSFLDVFGANGKYHLDLSGHDLSSVGA---- 61
Query: 87 SDEIRSCQGKDIKVLMSIGGGAGDYSLVSEADADNFADYLWNNFLGGQSSS--RPLGDAV 144
+I+ CQ K + V +SIGG YSL S A + D+LWN++ GG S RP GDA
Sbjct: 62 --DIKHCQSKGVPVSLSIGGYGTGYSLPSNRSALDLFDHLWNSYFGGSKPSVPRPFGDAW 119
Query: 145 LDGIDFDIELGTTT-FYDTLARALSS---RSTQAAKVYLTAAPQCPHPD-SHLDAALNTG 199
LDG+D +E GT YD LA L+ R ++LTA +C +P +H+ AL TG
Sbjct: 120 LDGVDLFLEHGTPADRYDVLALELAKHNIRGGPGKPLHLTATVRCGYPPAAHVGRALATG 179
Query: 200 LFDNVWIQFYNNPLAQCQYSSGNTNDILSSWNTWTSSTTAGKIFLGLPAAPEAAGSGYIP 259
+F+ V ++ Y + C + G SW+ WT++ A + ++GL A ++ ++
Sbjct: 180 IFERVHVRTYESD-KWCNQNLG----WEGSWDKWTAAYPATRFYVGLTADDKS--HQWVH 232
Query: 260 PDVLTGQILPQIKTSAKYGGVMLYSKFYD--TTYSTTIK 296
P + + P + YGG+ML+ +++D T YS+ IK
Sbjct: 233 PKNVYYGVAPVAQKKDNYGGIMLWDRYFDKQTNYSSLIK 271
>2XVP-A nrPDB
Length = 310
Score = 123 bits (309), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 91/286 (31%), Positives = 133/286 (46%), Gaps = 31/286 (10%)
Query: 28 DIAIYWGQNGGEGTLASTCDTGRYAYVIVSFVTTFGNF---RAPVVNLAGHCDPAA---- 80
++AIYWGQ + L+ C + + F+ F + P N CD +
Sbjct: 3 NLAIYWGQGPNQLRLSHFCQETSLDIINIGFINYFPDMSPGHWPGSNFGNQCDGSVYVTN 62
Query: 81 --------GTCTGLSDEIRSCQGKDIKVLMSIGGG-AGDYSLVSEADADNFADYLWNNF- 130
C + ++I CQ KVL+SIGG D S++SE A FA +LW F
Sbjct: 63 DGVVTKLLSGCHQIMEDIPICQAAGKKVLLSIGGAYPPDQSILSEDSAVAFATFLWGAFG 122
Query: 131 --LGGQSSSRPLGDAVLDGIDFDIELGTTTFYDTLARALSSRSTQAA--KVYLTAAPQCP 186
G RP GD V+DG DFDIE Y T+ Q K YL+AAPQC
Sbjct: 123 PVAEGWEGPRPFGDVVVDGFDFDIEHNGGFGYATMVNTFRQYFNQVPERKFYLSAAPQCI 182
Query: 187 HPDSHLDAALNTGLFDNVWIQFYNNPLAQCQYSSG-NTNDILSSWNTWT-----SSTTAG 240
PD+ L A+ FD +WIQ+YN A C S +T+ +++ W S++
Sbjct: 183 IPDAQLSDAIFNAAFDFIWIQYYNT--AACSAKSFIDTSLGTFNFDAWVTVLKASASKDA 240
Query: 241 KIFLGLPAAPEAAGSG-YIPPDVLTGQILPQI-KTSAKYGGVMLYS 284
K+++GLPA+ AA G Y+ PD + + + + +GG+ML+
Sbjct: 241 KLYVGLPASETAANQGYYLTPDEVESLVSTYMDRYPDTFGGIMLWE 286
>3EBV-A nrPDB
Length = 302
Score = 64.7 bits (156), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 62/187 (33%), Positives = 92/187 (49%), Gaps = 25/187 (13%)
Query: 89 EIRSCQGKDIKVLMSIGGGAGDYSLVSEADADNFADYLWNNFLGGQSSSRPLGDAVLDGI 148
++R+ Q KV++S+GG G S+ S A A NFA+ ++ S R G DG+
Sbjct: 67 DVRAKQAAGKKVIISVGGEKGTVSVNSSASATNFANSVY-------SVMREYG---FDGV 116
Query: 149 DFDIELGTTTFYDTLA-RALSSRSTQAAKVYLTAAPQCPHPDS----HLDAALNTG-LFD 202
D D+E G Y T A RALS+++ + LT APQ S + ALN +
Sbjct: 117 DIDLENGLNPTYMTQALRALSAKA--GPDMILTMAPQTIDMQSTQGGYFQTALNVKDILT 174
Query: 203 NVWIQFYNN-PLAQCQ---YSSGNTNDILSSWN--TWTSSTTAGKIFLGLPAAPEAAGSG 256
V +Q+YN+ + C Y+ G T D L++ ++ LGLPA+ AAG G
Sbjct: 175 VVNMQYYNSGTMLGCDGKVYAQG-TVDFLTALACIQLEGGLAPSQVGLGLPASTRAAGGG 233
Query: 257 YIPPDVL 263
Y+ P V+
Sbjct: 234 YVSPSVV 240
>4TX8-A nrPDB
Length = 439
Score = 54.7 bits (130), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 67/247 (27%), Positives = 107/247 (43%), Gaps = 41/247 (16%)
Query: 54 VIVSFVTTFGNFRAPVVNLAGHCDPAAGTCTGLSDEIRSCQGKDIKVLMSIGGGAGDYSL 113
++V+F GN N++ DPAAG+ +IR+ Q K KV++S+GG G +L
Sbjct: 136 IVVAFADDAGNG-----NVSFTLDPAAGSAAQFIQDIRAQQAKGKKVVLSLGGQNGSVTL 190
Query: 114 VSEADADNFADYLWNNFLGGQSSSRPLGDAVLDGIDFDIELGTTTFYD--TLARALSSRS 171
+ NF + L+ L DGID D+E G+ ++ +S+
Sbjct: 191 NNATQVQNFVNSLYG----------ILTQYGFDGIDLDLESGSGIVVGAPVVSNLVSAVK 240
Query: 172 TQAAKV----YLTAAPQCPHPDSHLDA---------ALNTGLFDN---VWIQFYNNPLAQ 215
AK+ YL+ AP+ P+ A + GL D+ + +Q+YNN
Sbjct: 241 QLKAKIGPNFYLSMAPEHPYVQGGFVAYGGNWGAYLPIIDGLRDDLSVIHVQYYNNGGLY 300
Query: 216 CQYSSGNTNDILSSWNTWTSSTTAGKIFLGLPAAPEAAGS--GYIPPDVLTGQILPQIKT 273
YS+G +L+ + + + G P A A+GS G P V G +P ++
Sbjct: 301 TPYSTG----VLAEGSADMLVGGSKMLIEGFPIANGASGSFKGLRPDQVAFG--VPSGRS 354
Query: 274 SAKYGGV 280
SA G V
Sbjct: 355 SANSGFV 361
>3UTO-A nrPDB
Length = 573
Score = 35.8 bits (81), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 55/144 (38%), Gaps = 15/144 (10%)
Query: 44 STCDTGRYAYVIVSFVTTFG--NFRAPVVNLAGHCDPAAGTCTGL--SDEIRSCQGKDIK 99
S C RY Y + + FR N G P T L DE + +G D+
Sbjct: 57 SPCAKSRYTYTTIEGLRAGKQYEFRIIAENKHGQSKPCEPTAPVLIPGDERKRRRGYDVD 116
Query: 100 VLMSIGGGAGDYSLVSEADADNFADYLWNNFLGGQSSSRPLGDAVLDGIDFDIELGTTTF 159
I G G S ++ DN+ +W + + D VLD D ELGT F
Sbjct: 117 EQGKIVRGKGTVS----SNYDNYVFDIWKQYYPQPVEIK--HDHVLDHYDIHEELGTGAF 170
Query: 160 YDTLARALSSRSTQ---AAKVYLT 180
+ ++ R+T AAK +T
Sbjct: 171 --GVVHRVTERATGNNFAAKFVMT 192
>3IAN-A nrPDB
Length = 321
Score = 32.3 bits (72), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 61/288 (21%), Positives = 106/288 (36%), Gaps = 52/288 (18%)
Query: 32 YWGQNGGEGTLASTCDTGRYAYVIVSFVTTFGNFRAPVVNLAGHCDPAAGTCTGLSDEIR 91
Y G + + L+ST + Y + VSF+ T P P T T EI
Sbjct: 22 YKGGSSADFNLSSTQEG--YNVINVSFMKT------PEGQTLPTFKPYNKTDTEFRAEIS 73
Query: 92 SCQGKDIKVLMSIGGGAGDYSLVSEADADNFADYLWNNFLGGQSSSRPLGDAVLDGIDFD 151
+ VL+++GG L ++D + + R + DG+D D
Sbjct: 74 KLNAEGKSVLIALGGADAHIELKKSQESDFVNEII-----------RLVDTYGFDGLDID 122
Query: 152 IELGTTTFYDT-------LARALSSRSTQAAKVYLTAAPQCPHPDS---------HLDAA 195
+E D L + +T AP+ P+ S +LD+
Sbjct: 123 LEQAAIEAADNQTVIPSALKKVKDHYRKDGKNFMITMAPEFPYLTSSGKYAPYINNLDSY 182
Query: 196 LN-----------TGLFD---NVWIQFYNNPLAQCQYSSGNTNDILSSWNTWTSSTTAGK 241
+ G +D N+WI N+ + + G T +++ + + A K
Sbjct: 183 YDFINPQYYNQGGDGFWDSDLNMWISQSNDEKKE-DFLYGLTQRLVTGTDGFIK-IPASK 240
Query: 242 IFLGLPAAPEAAGSGYIPPDVLTGQILPQIKTSA-KYGGVMLYSKFYD 288
+GLP+ +AA +GY+ L ++K S + G+M +S +D
Sbjct: 241 FVIGLPSNNDAAATGYVKDPNAVKNALNRLKASGNEIKGLMTWSVNWD 288
>3N18-A nrPDB
Length = 333
Score = 29.6 bits (65), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 36/125 (28%), Positives = 51/125 (40%), Gaps = 17/125 (13%)
Query: 32 YWGQ-NGGEGTLASTCDTGRYAYVIVSFVTTFGNFRAPVVNLAGHCDPAAGTCTGLSDEI 90
YW + G G + + ++ + VSF T G+ R+ V P GT +I
Sbjct: 12 YWHNFDNGTGIIKLKDVSPKWDVINVSFGETGGD-RSTV-----EFSPVYGTDADFKSDI 65
Query: 91 RSCQGKDIKVLMSIGGGAGDYSLVSEADADNFADYLWNNFLGGQSSSRPLGDAVLDGIDF 150
+ K KV++SIGG G L A D F + + QS G DGID
Sbjct: 66 SYLKSKGKKVVLSIGGQNGVVLLPDNAAKDRFINSI-------QSLIDKYG---FDGIDI 115
Query: 151 DIELG 155
D+ G
Sbjct: 116 DLGSG 120
>3J81-k nrPDB
Length = 527
Score = 29.6 bits (65), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 14/37 (37%), Positives = 19/37 (51%), Gaps = 1/37 (2%)
Query: 156 TTTFYDTLARALSSRSTQA-AKVYLTAAPQCPHPDSH 191
T F D L R ++ + A AK+Y P CP PD +
Sbjct: 125 TVRFKDELERNITIKLGYANAKIYKCQEPTCPEPDCY 161
>5A9Q-8 nrPDB
Length = 656
Score = 29.6 bits (65), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 15/39 (38%), Positives = 21/39 (53%)
Query: 114 VSEADADNFADYLWNNFLGGQSSSRPLGDAVLDGIDFDI 152
V D +A + FLGG+SS PL + +L +FDI
Sbjct: 319 VKPIDLHYYAQSSLDLFLGGESSPEPLDNILLAAFEFDI 357
>1EOM-A nrPDB
Length = 290
Score = 28.9 bits (63), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 57/246 (23%), Positives = 92/246 (37%), Gaps = 57/246 (23%)
Query: 86 LSDEIRSCQGKDIKVLMSIGGGAGDYSLVSEADADNFADYLWNNFLGGQSSSRPLGDAV- 144
L +IRS Q + IKVL +I D S S GG +S+ GDA+
Sbjct: 68 LDTQIRSLQSRGIKVLQNIDD---DVSWQSSKP-------------GGFASAAAYGDAIK 111
Query: 145 --------LDGIDFDIE-----------------LGTTTFYD---TLARALSSRSTQAAK 176
LDGI DIE G +Y A + ++ K
Sbjct: 112 SIVIDKWKLDGISLDIEHSGAKPNPIPTFPGYAATGYNGWYSGSMAATPAFLNVISELTK 171
Query: 177 VYLTAAPQCPHPDSHLDAALNTGLFDNVWIQFYNN-PLAQCQYSSGNTN--DILSSWNTW 233
+ T AP + + + ++ ++ + F NN Q Q N + ++ ++ T
Sbjct: 172 YFGTTAPN--NKQLQIASGIDVYAWNKIMENFRNNFNYIQLQSYGANVSRTQLMMNYATG 229
Query: 234 TSSTTAGKIFLGLPAAPEAAGSGYIPPDVLTGQILPQIKTSAKYGGVMLYSKFYDTTYST 293
T+ A K+ G A G DV + P T GG+M+Y+ + +Y+
Sbjct: 230 TNKIPASKMVFG----AYAEGGTNQANDVEVAKWTP---TQGAKGGMMIYTYNSNVSYAN 282
Query: 294 TIKDQV 299
++D V
Sbjct: 283 AVRDAV 288
>4AXN-A nrPDB
Length = 328
Score = 28.5 bits (62), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 47/204 (23%), Positives = 76/204 (37%), Gaps = 55/204 (26%)
Query: 90 IRSCQGKDIKVLMSIGGGAGDYSLVSEADADNFADYLWNNFLGGQSSSRPLGDAVLDGID 149
+ + QG+ VL+S+GG L + D D D + R + DG+D
Sbjct: 91 VLNSQGR--AVLISLGGADAHIELKT-GDEDKLKDEI----------IRLVEVYGFDGLD 137
Query: 150 FDIELG-------TTTFYDTLARALSSRSTQAAKVYLTAAPQCPH---PDSHLD--AALN 197
D+E T L + + Q ++ AP+ P+ ++LD AL
Sbjct: 138 IDLEQAAIGAANNKTVLPAALKKVKDHYAAQGKNFIISMAPEFPYLRTNGTYLDYINAL- 196
Query: 198 TGLFDNVWIQFYNNPLAQCQYSSGNTNDILSSWNTWTSSTT------------------- 238
G +D + Q+YN Q G D L++W T +
Sbjct: 197 EGYYDFIAPQYYN------QGGDGIWVDELNAWITQNNDAMKEDFLYYLTESLVTGTRGY 250
Query: 239 ----AGKIFLGLPAAPEAAGSGYI 258
A K +GLP+ +AA +GY+
Sbjct: 251 AKIPAAKFVIGLPSNNDAAATGYV 274
>3SIM-A nrPDB
Length = 275
Score = 28.5 bits (62), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 34/162 (20%), Positives = 58/162 (35%), Gaps = 26/162 (16%)
Query: 145 LDGIDFDIE----LGTTTFYDTLARALSSRSTQAAKVYLTAAPQCPHPDSHLDAALNTGL 200
LDGID D E TF + + R +++ + + +P P D + A N
Sbjct: 119 LDGIDIDYEHFQNTDKNTFAECIGRLITTLKKNGVISFASISP-FPSVDEYYLALFNE-- 175
Query: 201 FDNVWIQFYNNPLAQCQY------SSGNTNDILSSWNTWTSSTTAGKIFLGLPAAPEAAG 254
Y N + Y SS + + L +N S G + + P G
Sbjct: 176 --------YKNAINHINYQFKAYDSSTSVDKFLGYYNNAASKYKGGNVLISFSTGPHPGG 227
Query: 255 SGYIPPDVLTGQILPQIKTSAKYGGVMLYSKFYDTTYSTTIK 296
+P D +K K G+ +++ DT+ S+ +
Sbjct: 228 ---LPVDKGFFDAATSLKNKGKLHGIAVWTA--DTSKSSDFR 264
>5TKY-A nrPDB
Length = 621
Score = 28.1 bits (61), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 32/141 (22%), Positives = 52/141 (36%), Gaps = 10/141 (7%)
Query: 142 DAVLDGIDFDIELGTTTFYDTLARALSSRSTQAAKVYLTAAPQCPHPDSHL--------- 192
D++ DG DF+I++ F D A+A + A+V A + D +
Sbjct: 296 DSLFDGEDFNIQITRARFEDLNAKAFAGTLEPVAQVLKDAGIEKHQVDEIVLVGGSTRIP 355
Query: 193 -DAALNTGLFDNVWIQFYNNPLAQCQYSSGNTNDILSSWNTWTSSTTAGKIFLGLPAAPE 251
L + FD ++ NP Y + ILS T ++ + + +
Sbjct: 356 RIQKLLSEFFDGKKLEKSINPDEAVAYGAAVQAGILSGKATSADTSDLLLLDVVPLSLGV 415
Query: 252 AAGSGYIPPDVLTGQILPQIK 272
A P V GQ +P IK
Sbjct: 416 AMEGNIFAPVVPRGQTVPTIK 436
>3QOK-A nrPDB
Length = 420
Score = 27.3 bits (59), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 40/78 (51%), Gaps = 9/78 (11%)
Query: 94 QGKDIKVLMSIGG-GAGDYSLVSEADADNFADYLWNNFLGGQSSSRPLGDAVLDGIDFDI 152
Q D+KVL+S+GG GA +S + A A++ A ++ +S+ + + LDGID D
Sbjct: 104 QNPDLKVLLSVGGWGARGFSGAA-ATAESRAVFI-------RSAQKIIQQYGLDGIDLDW 155
Query: 153 ELGTTTFYDTLARALSSR 170
E + +A + R
Sbjct: 156 EFPVNGAWGLVASQPADR 173
>4W5U-B nrPDB
Length = 408
Score = 26.9 bits (58), Expect = 10.0, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 34/86 (39%), Gaps = 9/86 (10%)
Query: 71 NLAGHCDPAAGTCTGLSDEIRSCQGK--DIKVLMSIGGGAGDYSLVSEA-DADNFADYLW 127
+++G D G +++R + K IKVL S GG A D FA +
Sbjct: 104 SVSGQADTWDQPLRGNFNQLRQLKAKYPHIKVLWSFGGWTWSGGFADAAKDPQGFAQSCY 163
Query: 128 NNFLGGQSSSRPLGDAVLDGIDFDIE 153
N P D V DGID D E
Sbjct: 164 NLV------HDPRWDGVFDGIDIDWE 183
Searching..................................................done
Results from round 2
Score E
Sequences producing significant alignments: (bits) Value
Sequences used in model and found again:
4TOQ-A nrPDB 406 e-114
2GSJ-A nrPDB 394 e-110
1KQY-A nrPDB 377 e-105
3D5H-A nrPDB 369 e-102
6IDN-A nrPDB 364 e-101
3MU7-A nrPDB 355 1e-98
6GWA-A nrPDB 313 7e-86
4B15-A nrPDB 309 1e-84
1OM0-A nrPDB 303 4e-83
2XVP-A nrPDB 275 1e-74
4TXE-A nrPDB 262 1e-70
4TX8-A nrPDB 177 7e-45
3EBV-A nrPDB 156 1e-38
Sequences not found previously or not previously below threshold:
3IAN-A nrPDB 84 7e-17
3N18-A nrPDB 82 3e-16
4W5Z-A nrPDB 71 7e-13
4MB4-A nrPDB 69 2e-12
4AXN-A nrPDB 69 3e-12
2Y8V-A nrPDB 50 2e-06
3SIM-A nrPDB 44 1e-04
1EDT-A nrPDB 42 4e-04
3QOK-A nrPDB 42 5e-04
4WKA-A nrPDB 41 5e-04
1WB0-A nrPDB 41 5e-04
6EPB-A nrPDB 41 7e-04
5Y29-A nrPDB 40 0.001
6F8N-A nrPDB 40 0.002
3CHF-A nrPDB 38 0.005
5XWF-A nrPDB 37 0.011
3RM8-A nrPDB 37 0.013
4RL3-A nrPDB 37 0.013
3AQU-A nrPDB 36 0.019
5Y2C-A nrPDB 35 0.038
6MDV-A nrPDB 34 0.076
1NAR-A nrPDB 34 0.087
1KFW-A nrPDB 33 0.20
5GZU-A nrPDB 32 0.35
3W4R-A nrPDB 32 0.35
3G6L-A nrPDB 32 0.41
4W5U-B nrPDB 31 0.68
3WD0-A nrPDB 31 0.74
4URI-A nrPDB 31 0.80
1KRH-A nrPDB 30 0.84
4QAV-A nrPDB 30 1.2
1EOM-A nrPDB 30 1.4
4TXG-A nrPDB 30 1.4
5A9Q-8 nrPDB 29 2.3
6FOS-2 nrPDB 29 2.4
5ZGB-2 nrPDB 29 2.4
3GVX-A nrPDB 29 2.5
4OKD-A nrPDB 29 3.0
3RD8-A nrPDB 28 4.9
2EBN-A nrPDB 27 7.4
1EO7-A nrPDB 27 7.6
>4TOQ-A nrPDB
Length = 273
Score = 406 bits (1043), Expect = e-114, Method: Composition-based stats.
Identities = 273/273 (100%), Positives = 273/273 (100%)
Query: 27 GDIAIYWGQNGGEGTLASTCDTGRYAYVIVSFVTTFGNFRAPVVNLAGHCDPAAGTCTGL 86
GDIAIYWGQNGGEGTLASTCDTGRYAYVIVSFVTTFGNFRAPVVNLAGHCDPAAGTCTGL
Sbjct: 1 GDIAIYWGQNGGEGTLASTCDTGRYAYVIVSFVTTFGNFRAPVVNLAGHCDPAAGTCTGL 60
Query: 87 SDEIRSCQGKDIKVLMSIGGGAGDYSLVSEADADNFADYLWNNFLGGQSSSRPLGDAVLD 146
SDEIRSCQGKDIKVLMSIGGGAGDYSLVSEADADNFADYLWNNFLGGQSSSRPLGDAVLD
Sbjct: 61 SDEIRSCQGKDIKVLMSIGGGAGDYSLVSEADADNFADYLWNNFLGGQSSSRPLGDAVLD 120
Query: 147 GIDFDIELGTTTFYDTLARALSSRSTQAAKVYLTAAPQCPHPDSHLDAALNTGLFDNVWI 206
GIDFDIELGTTTFYDTLARALSSRSTQAAKVYLTAAPQCPHPDSHLDAALNTGLFDNVWI
Sbjct: 121 GIDFDIELGTTTFYDTLARALSSRSTQAAKVYLTAAPQCPHPDSHLDAALNTGLFDNVWI 180
Query: 207 QFYNNPLAQCQYSSGNTNDILSSWNTWTSSTTAGKIFLGLPAAPEAAGSGYIPPDVLTGQ 266
QFYNNPLAQCQYSSGNTNDILSSWNTWTSSTTAGKIFLGLPAAPEAAGSGYIPPDVLTGQ
Sbjct: 181 QFYNNPLAQCQYSSGNTNDILSSWNTWTSSTTAGKIFLGLPAAPEAAGSGYIPPDVLTGQ 240
Query: 267 ILPQIKTSAKYGGVMLYSKFYDTTYSTTIKDQV 299
ILPQIKTSAKYGGVMLYSKFYDTTYSTTIKDQV
Sbjct: 241 ILPQIKTSAKYGGVMLYSKFYDTTYSTTIKDQV 273
>2GSJ-A nrPDB
Length = 271
Score = 394 bits (1012), Expect = e-110, Method: Composition-based stats.
Identities = 168/275 (61%), Positives = 207/275 (75%), Gaps = 6/275 (2%)
Query: 27 GDIAIYWGQNGGEGTLASTCDTGRYAYVIVSFVTTFGNFRAPVVNLAGHCDPAAGTCTGL 86
G I +YWGQNGGEGTL STC++G Y V ++F++ FG R P +NLAGHCDPA C +
Sbjct: 1 GGIVVYWGQNGGEGTLTSTCESGLYQIVNIAFLSQFGGGRRPQINLAGHCDPANNGCRTV 60
Query: 87 SDEIRSCQGKDIKVLMSIGGGAGDYSLVSEADADNFADYLWNNFLGGQSSSRPLGDAVLD 146
SD IR+CQ + IKV++SIGGGAG YSL S DA + ADY+WNNFLGG+SSSRPLGDAVLD
Sbjct: 61 SDGIRACQRRGIKVMLSIGGGAGSYSLSSVQDARSVADYIWNNFLGGRSSSRPLGDAVLD 120
Query: 147 GIDFDIELGTTTFYDTLARALSSRSTQAAKVYLTAAPQCPHPDSHLDAALNTGLFDNVWI 206
G+DFDIE G +YD LAR LS + KV+L+AAPQCP PD L+ AL+TGLFD VW+
Sbjct: 121 GVDFDIEHG-GAYYDALARRLSEHNRGGKKVFLSAAPQCPFPDQSLNKALSTGLFDYVWV 179
Query: 207 QFYNNPLAQCQYSSGNTNDILSSWNTWTSSTTAGKIFLGLPAAPEAAGSGYIPPDVLTGQ 266
QFYNNP QC+++SGN ++ +SWN WTSS A K ++GLPA+PEAAGSGY+PP L Q
Sbjct: 180 QFYNNP--QCEFNSGNPSNFRNSWNKWTSSFNA-KFYVGLPASPEAAGSGYVPPQQLINQ 236
Query: 267 ILPQIKTSAKYGGVMLYSKFYD--TTYSTTIKDQV 299
+LP +K S KYGGVML+ +F D T YS+ IK V
Sbjct: 237 VLPFVKRSPKYGGVMLWDRFNDLKTKYSSKIKPSV 271
>1KQY-A nrPDB
Length = 273
Score = 377 bits (969), Expect = e-105, Method: Composition-based stats.
Identities = 187/275 (68%), Positives = 221/275 (80%), Gaps = 4/275 (1%)
Query: 27 GDIAIYWGQNGGEGTLASTCDTGRYAYVIVSFVTTFGNFRAPVVNLAGHCDPAAGTCTGL 86
G IAIYWGQNG EGTL TC T +Y+YV ++F+ FGN + P +NLAGHC+PAAG CT +
Sbjct: 1 GGIAIYWGQNGNEGTLTQTCSTRKYSYVNIAFLNKFGNGQTPQINLAGHCNPAAGGCTIV 60
Query: 87 SDEIRSCQGKDIKVLMSIGGGAGDYSLVSEADADNFADYLWNNFLGGQSSSRPLGDAVLD 146
S+ IRSCQ + IKV++S+GGG G Y+L S+ADA N ADYLWNNFLGG+SSSRPLGDAVLD
Sbjct: 61 SNGIRSCQIQGIKVMLSLGGGIGSYTLASQADAKNVADYLWNNFLGGKSSSRPLGDAVLD 120
Query: 147 GIDFDIELGTTTFYDTLARALSSRSTQAAKVYLTAAPQCPHPDSHLDAALNTGLFDNVWI 206
GIDF I G+T ++D LAR LS+ S Q KVYLTAAPQCP PD +L ALNTGLFD VW+
Sbjct: 121 GIDFAIAHGSTLYWDDLARYLSAYSKQGKKVYLTAAPQCPFPDRYLGTALNTGLFDYVWV 180
Query: 207 QFYNNPLAQCQYSSGNTNDILSSWNTWTSSTTAGKIFLGLPAAPEAAGSGYIPPDVLTGQ 266
QF+NNP CQYSSGN N+I++SWN WT+S AGKIFLGLPAAPEAAGSGY+PPDVL +
Sbjct: 181 QFFNNP--PCQYSSGNINNIINSWNRWTTSINAGKIFLGLPAAPEAAGSGYVPPDVLISR 238
Query: 267 ILPQIKTSAKYGGVMLYSKFYDTT--YSTTIKDQV 299
ILP+IK S KYGGVML+SKFYD YS++I D V
Sbjct: 239 ILPEIKKSPKYGGVMLWSKFYDDKNGYSSSILDSV 273
>3D5H-A nrPDB
Length = 272
Score = 369 bits (946), Expect = e-102, Method: Composition-based stats.
Identities = 131/271 (48%), Positives = 180/271 (66%), Gaps = 10/271 (3%)
Query: 28 DIAIYWGQNGGEGTLASTCDTGRYAYVIVSFVTTFGNFRAPVVNLAGHCDPAAGTCTGLS 87
DIA+YWGQN E +L +TCDTG YAYVI+ F+ TFG + P ++++GH + +GL
Sbjct: 4 DIAVYWGQNFDERSLEATCDTGNYAYVIIGFLNTFGGGQTPALDISGH------SPSGLE 57
Query: 88 DEIRSCQGKDIKVLMSIGGGAGDYSLVSEADADNFADYLWNNFL--GGQSSSRPLGDAVL 145
+I+ CQ K++KVL+SIGG G YSL S +DA++ A YL+NNFL G S +RP G+AVL
Sbjct: 58 PQIKHCQSKNVKVLLSIGGPKGPYSLDSRSDANDLAVYLFNNFLLPPGHSENRPFGNAVL 117
Query: 146 DGIDFDIELGTTTFYDTLARALSSRSTQAAKVYLTAAPQCPHPDSHLDAALNTGLFDNVW 205
DGIDF IE G + Y LA LSS + LTAAPQC +PD +L +N+ FD +W
Sbjct: 118 DGIDFHIEHGGPSQYQLLANILSSFRLAGTEFALTAAPQCVYPDPNLGTVINSATFDAIW 177
Query: 206 IQFYNNPLAQCQYSSGNTNDILSSWNTWTSSTTAGKIFLGLPAAPEAAGSGYIPPDVLTG 265
+QFYNNP QC YSSGN ++++W W+ K+FLG PA P+AAGSGY+PP+ +
Sbjct: 178 VQFYNNP--QCSYSSGNAEALMNAWREWSMKARTKKVFLGFPAHPDAAGSGYMPPEKVKF 235
Query: 266 QILPQIKTSAKYGGVMLYSKFYDTTYSTTIK 296
+ P K S K+GG+ML+ ++DT + + K
Sbjct: 236 HVFPAAKKSYKFGGIMLWDSYWDTVSNFSSK 266
>6IDN-A nrPDB
Length = 272
Score = 364 bits (934), Expect = e-101, Method: Composition-based stats.
Identities = 151/275 (54%), Positives = 186/275 (67%), Gaps = 5/275 (1%)
Query: 27 GDIAIYWGQNGGEGTLASTCDTGRYAYVIVSFVTTFGNFRAPVVNLAGHCDPAAGTCTGL 86
G+IAIYWGQ+GGEG+L TCDT Y + + F+TTFG+ P++NL HC+PA C L
Sbjct: 1 GEIAIYWGQDGGEGSLRETCDTDDYDIINIGFLTTFGHSTTPILNLTKHCNPATSACKFL 60
Query: 87 SDEIRSCQGKDIKVLMSIGGGAGDYSLVSEADADNFADYLWNNFLGGQSSSRPLGDAVLD 146
S EI C+ K IKV +S+GGG G+Y L S DA + A YLWNNFLGGQS SRPLGD LD
Sbjct: 61 SSEISYCKSKGIKVFLSLGGGTGNYYLSSRDDAASVAQYLWNNFLGGQSESRPLGDESLD 120
Query: 147 GIDFDIELGTTTFYDTLARALSSRST-QAAKVYLTAAPQCPHPDSHLDAALNTGLFDNVW 205
GIDFDIE G+ +YDTLA L + VYL AAP C PD +L A+NT LFD VW
Sbjct: 121 GIDFDIEDGSNDYYDTLAEQLWILGGRSGSNVYLAAAPACEFPDYYLREAINTSLFDYVW 180
Query: 206 IQFYNNPLAQCQYSSGNTNDILSSWNTWTSSTTAGKIFLGLPAAPEAA-GSGYIPPDVLT 264
+QFYNNP +C Y GN ++L+SWN S+ +FLGLPAAP+AA G G+I D L
Sbjct: 181 VQFYNNP--RCHY-LGNATNLLNSWNNDWSTILTDDLFLGLPAAPQAAPGGGFIEADDLI 237
Query: 265 GQILPQIKTSAKYGGVMLYSKFYDTTYSTTIKDQV 299
++LP IK + YGGVML+SK+YD YS+ IK V
Sbjct: 238 SEVLPTIKATYDYGGVMLWSKYYDDDYSSKIKPDV 272
>3MU7-A nrPDB
Length = 273
Score = 355 bits (911), Expect = 1e-98, Method: Composition-based stats.
Identities = 127/272 (46%), Positives = 176/272 (64%), Gaps = 11/272 (4%)
Query: 28 DIAIYWGQNGGEGTLASTCDTGRYAYVIVSFVTTFGNFRAPVVNLAGHCDPAAGTCTGLS 87
DIA+YWGQ+ E +L +TCD+G YAYVI+ F+ TFG + P ++++GH + GL
Sbjct: 4 DIAVYWGQSFDERSLEATCDSGNYAYVIIGFLNTFGGGQTPALDISGH------SPKGLE 57
Query: 88 DEIRSCQGKDIKVLMSIGGGAGDYSLVSEADADNFADYLWNNFL---GGQSSSRPLGDAV 144
+I+ CQ K++KVL+SIGG AG YSL S DA++ A YL NFL G S SRP G+AV
Sbjct: 58 PQIKHCQSKNVKVLLSIGGPAGPYSLDSRNDANDLAVYLHKNFLLPPAGTSESRPFGNAV 117
Query: 145 LDGIDFDIELGTTTFYDTLARALSSRSTQAAKVYLTAAPQCPHPDSHLDAALNTGLFDNV 204
LDGIDF IE G + Y LA LSS ++ LTAAPQC +PD +L +N+ FD +
Sbjct: 118 LDGIDFHIEHGGPSQYQLLANILSSFRLSGSEFALTAAPQCVYPDPNLGTVINSATFDAI 177
Query: 205 WIQFYNNPLAQCQYSSGNTNDILSSWNTWTSSTTAGKIFLGLPAAPEAAGSGYIPPDVLT 264
W+QFYNNP QC YS+ N + ++++W W+ K+FLG PA P+AAGSGY+PP +
Sbjct: 178 WVQFYNNP--QCSYSASNASALMNAWKEWSMKARTDKVFLGFPAHPDAAGSGYMPPTKVK 235
Query: 265 GQILPQIKTSAKYGGVMLYSKFYDTTYSTTIK 296
+ P + S K+GG+ML+ ++DT + K
Sbjct: 236 FSVFPNAQDSTKFGGIMLWDSYWDTVSQFSNK 267
>6GWA-A nrPDB
Length = 299
Score = 313 bits (801), Expect = 7e-86, Method: Composition-based stats.
Identities = 111/282 (39%), Positives = 154/282 (54%), Gaps = 14/282 (4%)
Query: 24 ISAGDIAIYWGQNGGEGTLASTCDTGRYAYVIVSFVTTFG-NFRAPVVNLAGHCDPAAGT 82
IS+ +IA+YWGQ +G L TC T Y V +SF+ FG R P + L G C P+ G
Sbjct: 2 ISSTEIAVYWGQRE-DGLLRDTCKTNNYKIVFISFLDKFGCEIRKPELELEGVCGPSVGN 60
Query: 83 -CTGLSDEIRSCQGKDIKVLMSIGGGAGDYSLVSEADADNFADYLWNNFLGGQSSSRPLG 141
C+ L +I+ CQ +KV +++GG G YS S A + A+YL FL + PLG
Sbjct: 61 PCSFLESQIKECQRMGVKVFLALGGPKGTYSACSADYAKDLAEYLHTYFLSERREG-PLG 119
Query: 142 DAVLDGIDFDIELGTTTF-YDTLARALSS-RSTQAAKVYLTAAPQCPHPDSHLDAALNTG 199
LDGI FDI+ +D L L + + L+AAP C PD +LD A+ T
Sbjct: 120 KVALDGIHFDIQKPVDELNWDNLLEELYQIKDVYQSTFLLSAAPGCLSPDEYLDNAIQTR 179
Query: 200 LFDNVWIQFYNNPLAQCQYSSGNTNDILSSWNTWTSSTTA--GKIFLGLPAAPEAA-GSG 256
FD ++++FYN+ CQYS+GN I ++W +WT S +FL LPA+ A G G
Sbjct: 180 HFDYIFVRFYND--RSCQYSTGNIQRIRNAWLSWTKSVYPRDKNLFLELPASQATAPGGG 237
Query: 257 YIPPDVLTGQILPQI-KTSAKYGGVMLYSKFYD--TTYSTTI 295
YIPP L GQ+LP + +Y G+ L+++ D T YST I
Sbjct: 238 YIPPSALIGQVLPYLPDLQTRYAGIALWNRQADKETGYSTNI 279
>4B15-A nrPDB
Length = 266
Score = 309 bits (791), Expect = 1e-84, Method: Composition-based stats.
Identities = 101/276 (36%), Positives = 155/276 (56%), Gaps = 18/276 (6%)
Query: 27 GDIAIYWGQNGG---EGTLASTCDTGRYAYVIVSFVTTFGNFRAPVVNLAGHCDPAAGTC 83
G+I +YWGQ G EG+L C +G Y +++ + T+ N R P +NL HC C
Sbjct: 2 GNIVVYWGQGGSDNSEGSLKEACKSGHYNMIVLEELITYDNGRDPDLNLGAHC----VNC 57
Query: 84 TGLSDEIRSCQGKDIKVLMSIGGGAGDYSLVSEADADNFADYLWNNFLGGQSSSRPLGDA 143
T L EI+ CQ K IK+L+ IG + + + YL +NF G+S PLG+
Sbjct: 58 TSLQQEIKYCQLKLIKILLQIGQVTPTKEDTKDTT-KDLSQYLDSNFFSGKSG--PLGEV 114
Query: 144 VLDGIDF-DIELGTTTFYDTLARALSSRSTQAAKVYLTAAPQCPHPDSHLDAALNTGLFD 202
LDGID + G +D L +AL+ +T + ++YL+A+P C +PD +LD A+ T D
Sbjct: 115 YLDGIDIASVPEGLNLKFDELVQALNDSAT-SRRIYLSASPNCVYPDYYLDKAIQTQKLD 173
Query: 203 NVWIQFYNNPLAQCQYSSGNTNDILSSWNTWTSSTTAGKIFLGLPAAPEAAGSGYIPPDV 262
+++QF+ C Y+ G D+ + TWTS+ KIF+ LPA P+ +GYIPP V
Sbjct: 174 FLFVQFFY--ALPCIYTQGLPEDLFQAMKTWTSNVPESKIFMALPATPDL--NGYIPPRV 229
Query: 263 LTGQILPQIKTSAKYGGVMLYSKFYD--TTYSTTIK 296
L +ILP + ++ + GVM++ +++D YS+ IK
Sbjct: 230 LNKEILPAVTQASNFAGVMIFDRYFDRFRKYSSKIK 265
>1OM0-A nrPDB
Length = 274
Score = 303 bits (777), Expect = 4e-83, Method: Composition-based stats.
Identities = 95/280 (33%), Positives = 149/280 (53%), Gaps = 22/280 (7%)
Query: 26 AGDIAIYWGQNGGEGTLASTCDTGRYAYVIVSFVTTFGNFRAPVVNLAGHCDPAAGTCTG 85
G + ++WG+N EG+L CD+G Y V +SF+ FG ++L+GH + G
Sbjct: 5 TGQVTVFWGRNKAEGSLREACDSGMYTMVTMSFLDVFGANGKYHLDLSGHDLSSVGA--- 61
Query: 86 LSDEIRSCQGKDIKVLMSIGGGAGDYSLVSEADADNFADYLWNNFLGGQSSS--RPLGDA 143
+I+ CQ K + V +SIGG YSL S A + D+LWN++ GG S RP GDA
Sbjct: 62 ---DIKHCQSKGVPVSLSIGGYGTGYSLPSNRSALDLFDHLWNSYFGGSKPSVPRPFGDA 118
Query: 144 VLDGIDFDIELGTTT-FYDTLARALSS---RSTQAAKVYLTAAPQCPHPD-SHLDAALNT 198
LDG+D +E GT YD LA L+ R ++LTA +C +P +H+ AL T
Sbjct: 119 WLDGVDLFLEHGTPADRYDVLALELAKHNIRGGPGKPLHLTATVRCGYPPAAHVGRALAT 178
Query: 199 GLFDNVWIQFYNNPLAQCQYSSGNTNDILSSWNTWTSSTTAGKIFLGLPAAPEAAGSGYI 258
G+F+ V ++ Y + C + G SW+ WT++ A + ++GL A ++ ++
Sbjct: 179 GIFERVHVRTYESD-KWCNQNLG----WEGSWDKWTAAYPATRFYVGLTADDKS--HQWV 231
Query: 259 PPDVLTGQILPQIKTSAKYGGVMLYSKFYD--TTYSTTIK 296
P + + P + YGG+ML+ +++D T YS+ IK
Sbjct: 232 HPKNVYYGVAPVAQKKDNYGGIMLWDRYFDKQTNYSSLIK 271
>2XVP-A nrPDB
Length = 310
Score = 275 bits (704), Expect = 1e-74, Method: Composition-based stats.
Identities = 91/286 (31%), Positives = 133/286 (46%), Gaps = 31/286 (10%)
Query: 28 DIAIYWGQNGGEGTLASTCDTGRYAYVIVSFVTTFGN---FRAPVVNLAGHCDPAA---- 80
++AIYWGQ + L+ C + + F+ F + P N CD +
Sbjct: 3 NLAIYWGQGPNQLRLSHFCQETSLDIINIGFINYFPDMSPGHWPGSNFGNQCDGSVYVTN 62
Query: 81 --------GTCTGLSDEIRSCQGKDIKVLMSIGG-GAGDYSLVSEADADNFADYLWNNF- 130
C + ++I CQ KVL+SIGG D S++SE A FA +LW F
Sbjct: 63 DGVVTKLLSGCHQIMEDIPICQAAGKKVLLSIGGAYPPDQSILSEDSAVAFATFLWGAFG 122
Query: 131 --LGGQSSSRPLGDAVLDGIDFDIELGTTTFYDTLARALSSRSTQAA--KVYLTAAPQCP 186
G RP GD V+DG DFDIE Y T+ Q K YL+AAPQC
Sbjct: 123 PVAEGWEGPRPFGDVVVDGFDFDIEHNGGFGYATMVNTFRQYFNQVPERKFYLSAAPQCI 182
Query: 187 HPDSHLDAALNTGLFDNVWIQFYNNPLAQCQYSSG-NTNDILSSWNTWT-----SSTTAG 240
PD+ L A+ FD +WIQ+YN A C S +T+ +++ W S++
Sbjct: 183 IPDAQLSDAIFNAAFDFIWIQYYNT--AACSAKSFIDTSLGTFNFDAWVTVLKASASKDA 240
Query: 241 KIFLGLPAAPEAAGSG-YIPPDVLTGQILPQI-KTSAKYGGVMLYS 284
K+++GLPA+ AA G Y+ PD + + + + +GG+ML+
Sbjct: 241 KLYVGLPASETAANQGYYLTPDEVESLVSTYMDRYPDTFGGIMLWE 286
>4TXE-A nrPDB
Length = 294
Score = 262 bits (670), Expect = 1e-70, Method: Composition-based stats.
Identities = 97/274 (35%), Positives = 140/274 (51%), Gaps = 26/274 (9%)
Query: 25 SAGDIAIYWGQN--GGEGTLASTCDTGRYAYVIVSFVTTFGNFRAPVVNLAGHCDPAAGT 82
+ +IA+YWGQN G + +LA+ C++ ++SF+ F +N A C
Sbjct: 4 ANTNIAVYWGQNSAGTQESLATYCESSDADIFLLSFLNQFPTLG---LNFANACSDTFSD 60
Query: 83 ----CTGLSDEIRSCQGKDIKVLMSIGGGAGDYSLVSEADADNFADYLWNNF-LGGQSSS 137
CT ++++I +CQ KVL+S+GG +G Y ++ A+ FA LW+ F G +S
Sbjct: 61 GLLHCTQIAEDIETCQSLGKKVLLSLGGASGSYLFSDDSQAETFAQTLWDTFGEGTGASE 120
Query: 138 RPLGDAVLDGIDFDIELGTTTFYDTLARALSSRSTQAAK-VYLTAAPQCPHPDSHLDAAL 196
RP AV+DG DFDIE Y LA L + + K YL+AAPQCP+PD+ + L
Sbjct: 121 RPFDSAVVDGFDFDIENNNEVGYSALATKLRTLFAEGTKQYYLSAAPQCPYPDASVGDLL 180
Query: 197 NTGLFDNVWIQFYNNPLAQCQYSSGNTNDILSSWNTW------TSSTTAGKIFLGLPAAP 250
D +IQFYNN C S +W+TW S K+FLGLP +
Sbjct: 181 ENADIDFAFIQFYNN---YCSVS------GQFNWDTWLTYAQTVSPNKNIKLFLGLPGSA 231
Query: 251 EAAGSGYIPPDVLTGQILPQIKTSAKYGGVMLYS 284
AAGSGYI L + I +S+ +GG+ L+
Sbjct: 232 SAAGSGYISDTSLLESTIADIASSSSFGGIALWD 265
>4TX8-A nrPDB
Length = 439
Score = 177 bits (448), Expect = 7e-45, Method: Composition-based stats.
Identities = 65/253 (25%), Positives = 108/253 (42%), Gaps = 41/253 (16%)
Query: 48 TGRYAYVIVSFVTTFGNFRAPVVNLAGHCDPAAGTCTGLSDEIRSCQGKDIKVLMSIGGG 107
+ + ++V+F GN N++ DPAAG+ +IR+ Q K KV++S+GG
Sbjct: 130 SADWDVIVVAFADDAGNG-----NVSFTLDPAAGSAAQFIQDIRAQQAKGKKVVLSLGGQ 184
Query: 108 AGDYSLVSEADADNFADYLWNNFLGGQSSSRPLGDAVLDGIDFDIELGTTTFYD--TLAR 165
G +L + NF + L+ L DGID D+E G+ ++
Sbjct: 185 NGSVTLNNATQVQNFVNSLYG----------ILTQYGFDGIDLDLESGSGIVVGAPVVSN 234
Query: 166 ALSS----RSTQAAKVYLTAAPQCPHPDSHLDA---------ALNTGLFDN---VWIQFY 209
+S+ ++ YL+ AP+ P+ A + GL D+ + +Q+Y
Sbjct: 235 LVSAVKQLKAKIGPNFYLSMAPEHPYVQGGFVAYGGNWGAYLPIIDGLRDDLSVIHVQYY 294
Query: 210 NNPLAQCQYSSGNTNDILSSWNTWTSSTTAGKIFLGLPAAPEAAGS--GYIPPDVLTGQI 267
NN YS+G +L+ + + + G P A A+GS G P V G
Sbjct: 295 NNGGLYTPYSTG----VLAEGSADMLVGGSKMLIEGFPIANGASGSFKGLRPDQVAFG-- 348
Query: 268 LPQIKTSAKYGGV 280
+P ++SA G V
Sbjct: 349 VPSGRSSANSGFV 361
>3EBV-A nrPDB
Length = 302
Score = 156 bits (393), Expect = 1e-38, Method: Composition-based stats.
Identities = 80/286 (27%), Positives = 117/286 (40%), Gaps = 42/286 (14%)
Query: 29 IAIYWGQNGGEGTLASTCDT--GRYAYVIVSFVTTFGNFRAPVVNLAGHCDPAAGTCTGL 86
+ YW QN G Y + V+F A NL T
Sbjct: 7 VTGYW-QNFNNGATVQKISDVPSAYDIIAVAFADATTTPGAVTFNLDSAGLGGY-TVDQF 64
Query: 87 SDEIRSCQGKDIKVLMSIGGGAGDYSLVSEADADNFADYLWNNFLGGQSSSRPLGDAVLD 146
++R+ Q KV++S+GG G S+ S A A NFA+ ++ S R G D
Sbjct: 65 KADVRAKQAAGKKVIISVGGEKGTVSVNSSASATNFANSVY-------SVMREYG---FD 114
Query: 147 GIDFDIELGTTTFYDTLA-RALSSRSTQAAKVYLTAAPQCPHPDS----HLDAALNTG-L 200
G+D D+E G Y T A RALS+++ + LT APQ S + ALN +
Sbjct: 115 GVDIDLENGLNPTYMTQALRALSAKA--GPDMILTMAPQTIDMQSTQGGYFQTALNVKDI 172
Query: 201 FDNVWIQFYNNP-LAQCQ---YSSGNTNDILSSWN--TWTSSTTAGKIFLGLPAAPEAAG 254
V +Q+YN+ + C Y+ G T D L++ ++ LGLPA+ AAG
Sbjct: 173 LTVVNMQYYNSGTMLGCDGKVYAQG-TVDFLTALACIQLEGGLAPSQVGLGLPASTRAAG 231
Query: 255 SGYIPPDVLTGQILPQIKTSAKYG------------GVMLYSKFYD 288
GY+ P V+ L + + G G M +S +D
Sbjct: 232 GGYVSPSVVNAA-LDCLTKATNCGSFKPSKTYPDLRGAMTWSTNWD 276
>3IAN-A nrPDB
Length = 321
Score = 84.0 bits (206), Expect = 7e-17, Method: Composition-based stats.
Identities = 60/293 (20%), Positives = 105/293 (35%), Gaps = 50/293 (17%)
Query: 32 YWGQNGGEGTLASTCDTGRYAYVIVSFVTTFGNFRAPVVNLAGHCDPAAGTCTGLSDEIR 91
Y G + + L+ST + Y + VSF+ T P P T T EI
Sbjct: 22 YKGGSSADFNLSSTQEG--YNVINVSFMKTPEGQTLPTFK------PYNKTDTEFRAEIS 73
Query: 92 SCQGKDIKVLMSIGGGAGDYSLVSEADADNFADYLWNNFLGGQSSSRPLGDAVLDGIDFD 151
+ VL+++GG L ++ +F + + R + DG+D D
Sbjct: 74 KLNAEGKSVLIALGGADAHIEL-KKSQESDFVNEI----------IRLVDTYGFDGLDID 122
Query: 152 IELGTTTFYDTLARALSS-------RSTQAAKVYLTAAPQCPHPDSHLDAA--LNT--GL 200
+E D S+ +T AP+ P+ S A +N
Sbjct: 123 LEQAAIEAADNQTVIPSALKKVKDHYRKDGKNFMITMAPEFPYLTSSGKYAPYINNLDSY 182
Query: 201 FDNVWIQFYN------------------NPLAQCQYSSGNTNDILSSWNTWTSSTTAGKI 242
+D + Q+YN N + + G T +++ + + A K
Sbjct: 183 YDFINPQYYNQGGDGFWDSDLNMWISQSNDEKKEDFLYGLTQRLVTGTDGFI-KIPASKF 241
Query: 243 FLGLPAAPEAAGSGYIPPDVLTGQILPQIKTSAK-YGGVMLYSKFYDTTYSTT 294
+GLP+ +AA +GY+ L ++K S G+M +S +D ++
Sbjct: 242 VIGLPSNNDAAATGYVKDPNAVKNALNRLKASGNEIKGLMTWSVNWDAGTNSN 294
>3N18-A nrPDB
Length = 333
Score = 82.1 bits (201), Expect = 3e-16, Method: Composition-based stats.
Identities = 60/335 (17%), Positives = 103/335 (30%), Gaps = 81/335 (24%)
Query: 21 ARAISAGDIAIYWGQNGGEGT----LASTCDTGRYAYVIVSFVTTFGNFRAPVVNLAGHC 76
A + + + YW N GT L + ++ + VSF T G+
Sbjct: 1 ANNLGSKLLVGYW-HNFDNGTGIIKLKDV--SPKWDVINVSFGETGGDRSTVEF------ 51
Query: 77 DPAAGTCTGLSDEIRSCQGKDIKVLMSIGGGAGDYSLVSEADADNFADYLWNNFLGGQSS 136
P GT +I + K KV++SIGG G L A D F + + +
Sbjct: 52 SPVYGTDADFKSDISYLKSKGKKVVLSIGGQNGVVLLPDNAAKDRFINSIQSL------- 104
Query: 137 SRPLGDAVLDGIDFDIELGT----------TTFYDTLARALSSRST----QAAKVYLTAA 182
+ DGID D+ G + +S+ T L+ A
Sbjct: 105 ---IDKYGFDGIDIDLGSGIYLNGNDTNFKNPTTPQIVNLISAIRTISDHYGPDFLLSMA 161
Query: 183 PQCPHPDSHLDA---------ALNTGLFD---NVWIQFYNN----PLAQCQYSSGNTNDI 226
P+ + A + G+ D + +Q +N + Y+ G +
Sbjct: 162 PETAYVQGGYSAYGSIWGAYLPIIYGVKDKLTYIHVQHFNAGSGIGMDGNNYNQGTADYE 221
Query: 227 LSSWNTWTSSTT----AGKIFLGLPAAPEAAG----------SGYIPPDVLTGQI----- 267
++ + A IF L + G GYI P + +
Sbjct: 222 VAMADMLLHGFPVGGNANNIFPALRSDQVMIGLPAAPAAAPSGGYISPTEMKKALNYIIK 281
Query: 268 -LPQIKT--------SAKYGGVMLYSKFYDTTYST 293
+P + G+M +S +D +
Sbjct: 282 GVPFGGKYKLSNQSGYPAFRGLMSWSINWDAKNNF 316
>4W5Z-A nrPDB
Length = 345
Score = 70.9 bits (172), Expect = 7e-13, Method: Composition-based stats.
Identities = 53/288 (18%), Positives = 93/288 (32%), Gaps = 52/288 (18%)
Query: 35 QNGGEGTLASTCDTGRYAYVIVSFVTTFG--NFRAPVVNLAGHCDPAAG-TCTGLSDEIR 91
Q G + +Y V +SF+ + R P DP + +I
Sbjct: 47 QGGNAPCVELKTVNPQYNVVNISFMKVYDIAEGRIP----TFKLDPTIALSEAEFIAQID 102
Query: 92 SCQGKDIKVLMSIGGGAGDYSLVSEADADNFADYLWNNFLGGQSSSRPLGDAVLDGIDFD 151
+ + VL+++GG L + A+ + R DG+D D
Sbjct: 103 TLNSQGRSVLIALGGADAHIELTRGDEDALAAEII-----------RLTDLYGFDGLDID 151
Query: 152 IELGTTTFYDTLARALSS-------RSTQAAKVYLTAAPQCPHPDS------HLDAALNT 198
+E T D ++ +T AP+ P+ + +L
Sbjct: 152 LEQAAITAKDNQFVIPAALKMVKEHYRKTGDNFMITMAPEFPYLTANGAYTPYLTEL--D 209
Query: 199 GLFDNVWIQFYN-----------------NPLAQCQYSSGNTNDILSSWNTWTSSTTAGK 241
G +D + QFYN N + ++ + +++ + K
Sbjct: 210 GYYDFINPQFYNQGGDGLWIEGVGWIAQNNDALKEEFIYYIADSLINGTRNY-HKIPHDK 268
Query: 242 IFLGLPAAPEAAGSGYIP-PDVLTGQILPQIKTSAKYGGVMLYSKFYD 288
+ GLP+ +AA +GYI P L GVM +S +D
Sbjct: 269 LVFGLPSNIDAAATGYIQDPQDLYKAFDRLKAQGQPLRGVMTWSVNWD 316
>4MB4-A nrPDB
Length = 528
Score = 69.3 bits (168), Expect = 2e-12, Method: Composition-based stats.
Identities = 52/288 (18%), Positives = 93/288 (32%), Gaps = 52/288 (18%)
Query: 35 QNGGEGTLASTCDTGRYAYVIVSFVTTFG--NFRAPVVNLAGHCDPAAG-TCTGLSDEIR 91
Q G + +Y V +SF+ + R P DP + +I
Sbjct: 25 QGGNAPCVELKTVNPQYNVVNISFMKVYDIAEGRIP----TFKLDPTIALSEAEFIAQID 80
Query: 92 SCQGKDIKVLMSIGGGAGDYSLVSEADADNFADYLWNNFLGGQSSSRPLGDAVLDGIDFD 151
+ + VL+++GG L + A+ + R DG+D D
Sbjct: 81 TLNSQGRSVLIALGGADAHIELTRGDEDALAAEII-----------RLTDLYGFDGLDID 129
Query: 152 IELGTTTFYDTLARALSS-------RSTQAAKVYLTAAPQCPHPDS------HLDAALNT 198
++ T D ++ +T AP+ P+ + +L
Sbjct: 130 LQQAAITAKDNQFVIPAALKMVKEHYRKTGDNFMITMAPEFPYLTANGAYTPYLTEL--D 187
Query: 199 GLFDNVWIQFYN-----------------NPLAQCQYSSGNTNDILSSWNTWTSSTTAGK 241
G +D + QFYN N + ++ + +++ + K
Sbjct: 188 GYYDFINPQFYNQGGDGLWIEGVGWIAQNNDALKEEFIYYIADSLINGTRNY-HKIPHDK 246
Query: 242 IFLGLPAAPEAAGSGYIP-PDVLTGQILPQIKTSAKYGGVMLYSKFYD 288
+ GLP+ +AA +GYI P L GVM +S +D
Sbjct: 247 LVFGLPSNIDAAATGYIQDPQDLYKAFDRLKAQGQPLRGVMTWSVNWD 294
>4AXN-A nrPDB
Length = 328
Score = 69.0 bits (167), Expect = 3e-12, Method: Composition-based stats.
Identities = 51/279 (18%), Positives = 88/279 (31%), Gaps = 61/279 (21%)
Query: 49 GRYAYVIVSFVTTFGNFRAPVVNLAGHCDPAAGTCTGLSDEIRSCQGKDIKVLMSIGGGA 108
Y V V+F+ G NL+ T ++ + VL+S+GG
Sbjct: 57 TEYNVVAVAFMKGQGIPTFKPYNLSD---------TEFRRQVGVLNSQGRAVLISLGGAD 107
Query: 109 GDYSLVSEADADNFADYLWNNFLGGQSSSRPLGDAVLDGIDFDIE-------LGTTTFYD 161
L D D D + R + DG+D D+E T
Sbjct: 108 AHIEL-KTGDEDKLKDEI----------IRLVEVYGFDGLDIDLEQAAIGAANNKTVLPA 156
Query: 162 TLARALSSRSTQAAKVYLTAAPQCPHPDSHLDAALNTGLFDNVW-IQFYNNPLAQCQYSS 220
L + + Q ++ AP+ P+ + N D + ++ Y + +A Y+
Sbjct: 157 ALKKVKDHYAAQGKNFIISMAPEFPYLRT------NGTYLDYINALEGYYDFIAPQYYNQ 210
Query: 221 GNTNDILSSWNTWT--------------------------SSTTAGKIFLGLPAAPEAAG 254
G + N W + A K +GLP+ +AA
Sbjct: 211 GGDGIWVDELNAWITQNNDAMKEDFLYYLTESLVTGTRGYAKIPAAKFVIGLPSNNDAAA 270
Query: 255 SGYIPPDVLTGQILPQIKTSA-KYGGVMLYSKFYDTTYS 292
+GY+ ++ G+M +S +D S
Sbjct: 271 TGYVVNKQAVYNAFSRLDAKNLSIKGLMTWSINWDNGKS 309
>2Y8V-A nrPDB
Length = 290
Score = 49.7 bits (117), Expect = 2e-06, Method: Composition-based stats.
Identities = 42/213 (19%), Positives = 68/213 (31%), Gaps = 35/213 (16%)
Query: 89 EIRSCQGKDIKVLMSIGGGAGDYSLVSEADADNFADYLWNNFLGGQSSSRPLGDAVLDGI 148
E+ + +KV+ +GG A + D + F Y + L + LDG+
Sbjct: 77 EVPVLKRSGVKVMGMLGGAAQGSYRCLDGDQEKFERY-YQPLLAMVRRHQ------LDGL 129
Query: 149 DFDIELGTT-TFYDTLARALSSRSTQAAKVYLTAAPQCPHPDSHLDAALNTGLFDN---- 203
D D+E + L L + +T AP + L N FD
Sbjct: 130 DLDVEEEMSLPGIIRLIDRL--KLDLGDDFIITLAP----VAAALLGIGNLSGFDYRQLE 183
Query: 204 ---------VWIQFYNNPLAQCQYSSGNTNDILSSWNTWTSSTTAGKIFLGLPAAPEAAG 254
QFYN G D + ++ GL P
Sbjct: 184 QQRGSKISWYNAQFYNGW--------GLAEDPRMYAAIVAQGWSPQRVVYGLLTNPGNGS 235
Query: 255 SGYIPPDVLTGQILPQIKTSAKYGGVMLYSKFY 287
GY+P + + + ++ +GGVM + F
Sbjct: 236 QGYVPRERIGPVLAVLVEQFPNFGGVMGWEYFN 268
>3SIM-A nrPDB
Length = 275
Score = 43.5 bits (101), Expect = 1e-04, Method: Composition-based stats.
Identities = 50/250 (20%), Positives = 95/250 (38%), Gaps = 23/250 (9%)
Query: 54 VIVSFVTTFGNFRAPVVNLAGHCDPAAGTCTGLSDEIRSCQGK--DIKVLMSIGGGAGDY 111
++SF + +P + G + + D+I + + +++V +S+GG +
Sbjct: 31 FVLSFAVDY-TASSPHTSTNGKFNVFWDSSILGPDQISAIKSSHPNVRVAVSLGGASVG- 88
Query: 112 SLVSEADADNFADYLWNNFLGGQSSSRPLGDAVLDGIDFDIELGTTTFYDTLARALSSR- 170
S + A + ++ N S +R + LDGID D E T +T A +
Sbjct: 89 SNTVQFQAASVDSWVSNAV---TSLTRIIQRYNLDGIDIDYEHFQNTDKNTFAECIGRLI 145
Query: 171 STQAAKVYLTAAPQCPHP--DSHLDAALNT--GLFDNVWIQFYNNPLAQCQYSSGNTNDI 226
+T ++ A P P D + A N +++ QF SS + +
Sbjct: 146 TTLKKNGVISFASISPFPSVDEYYLALFNEYKNAINHINYQFKAYD------SSTSVDKF 199
Query: 227 LSSWNTWTSSTTAGKIFLGLPAAPEAAGSGYIPPDVLTGQILPQIKTSAKYGGVMLYSKF 286
L +N S G + + P G +P D +K K G+ +++
Sbjct: 200 LGYYNNAASKYKGGNVLISFSTGPHPGG---LPVDKGFFDAATSLKNKGKLHGIAVWT-- 254
Query: 287 YDTTYSTTIK 296
DT+ S+ +
Sbjct: 255 ADTSKSSDFR 264
>1EDT-A nrPDB
Length = 271
Score = 41.6 bits (96), Expect = 4e-04, Method: Composition-based stats.
Identities = 36/144 (25%), Positives = 56/144 (38%), Gaps = 33/144 (22%)
Query: 89 EIRSCQGKDIKVLMSIGG---GAGDYSLVSEADADNFADYLWNNFLGGQSSSRPLGDAVL 145
+IR Q + IKVL+S+ G GAG + S+ A FA L S + L
Sbjct: 75 QIRPLQQQGIKVLLSVLGNHQGAGFANFPSQQAASAFAKQL----------SDAVAKYGL 124
Query: 146 DGIDFDIELGTTTFYDTLARALSSRSTQAAKVYLTAAPQCPHPD-----SHLDAALN--- 197
DG+DFD E Y +++ ++ V+L A + PD ++ A +
Sbjct: 125 DGVDFDDE------YAEYGNNGTAQPNDSSFVHLVTALRANMPDKIISLYNIGPAASRLS 178
Query: 198 ------TGLFDNVWIQFYNNPLAQ 215
+ FD W +Y
Sbjct: 179 YGGVDVSDKFDYAWNPYYGTWQVP 202
>3QOK-A nrPDB
Length = 420
Score = 41.6 bits (96), Expect = 5e-04, Method: Composition-based stats.
Identities = 35/197 (17%), Positives = 64/197 (32%), Gaps = 27/197 (13%)
Query: 93 CQGKDIKVLMSIGGGAGDYSLVSEADADNFADYLWNNFLGGQSSSRPLGDAVLDGIDFDI 152
Q D+KVL+S+GG + A A++ A ++ +S+ + + LDGID D
Sbjct: 103 KQNPDLKVLLSVGGWGARGFSGAAATAESRAVFI-------RSAQKIIQQYGLDGIDLDW 155
Query: 153 ELGTTTFYDTLARA-------------LSSRSTQAAKVYLTAAPQCPHPDSHLDAALNTG 199
E + +A L + V + P S +D
Sbjct: 156 EFPVNGAWGLVASQPADRDNFTALLKSLREAVGEQKLVTIAVGANAESPKSWVDVKAVAP 215
Query: 200 LFDNVWIQFYNNPLAQCQYSSGNTNDILSSWNTWTSSTTAGKIFLGLPAAPEAAGSGYIP 259
+ + + + Y+ Y + N L + W + A K A +
Sbjct: 216 VLNYINLMTYDMA-----YGTQYFNSNLYDSSHWPTVAAADKYSADFVVNNYLAAG--LK 268
Query: 260 PDVLTGQILPQIKTSAK 276
P + I + +
Sbjct: 269 PSQMNLGIGFYGRVPKR 285
>4WKA-A nrPDB
Length = 377
Score = 41.2 bits (95), Expect = 5e-04, Method: Composition-based stats.
Identities = 41/182 (22%), Positives = 68/182 (37%), Gaps = 40/182 (21%)
Query: 99 KVLMSIGGGA-GDYSLVS-EADADNFADYLWNNFLGGQSSSRPLGDAVLDGIDFDIELGT 156
K L++IGG G A A+N ++ S+ R L DG+D D E
Sbjct: 70 KTLLAIGGWNFGTQKFTDMVATANNRQTFV-------NSAIRFLRKYSFDGLDLDWEYPG 122
Query: 157 T--------TFYDTLARALSSRSTQ------AAKVYLTAAPQCP--HPDSHLDAALNTGL 200
+ + TL + L++ Q ++ L+AA + D+ +
Sbjct: 123 SQGSPAVDKERFTTLVQDLANAFQQEAQTSGKERLLLSAAVPAGQTYVDAGYEVDKIAQN 182
Query: 201 FDNVWIQFY------------NNPLAQCQYSSGNTN--DILSSWNTWT-SSTTAGKIFLG 245
D V + Y N+PL + Q SG ++ ++ W T A K+ LG
Sbjct: 183 LDFVNLMAYDFHGSWEKVTGHNSPLYKRQEESGAAASLNVDAAVQQWLQKGTPASKLILG 242
Query: 246 LP 247
+P
Sbjct: 243 MP 244
>1WB0-A nrPDB
Length = 445
Score = 41.2 bits (95), Expect = 5e-04, Method: Composition-based stats.
Identities = 41/182 (22%), Positives = 68/182 (37%), Gaps = 40/182 (21%)
Query: 99 KVLMSIGGGA-GDYSLVS-EADADNFADYLWNNFLGGQSSSRPLGDAVLDGIDFDIELGT 156
K L++IGG G A A+N ++ S+ R L DG+D D E
Sbjct: 70 KTLLAIGGWNFGTQKFTDMVATANNRQTFV-------NSAIRFLRKYSFDGLDLDWEYPG 122
Query: 157 T--------TFYDTLARALSSRSTQ------AAKVYLTAAPQCP--HPDSHLDAALNTGL 200
+ + TL + L++ Q ++ L+AA + D+ +
Sbjct: 123 SQGSPAVDKERFTTLVQDLANAFQQEAQTSGKERLLLSAAVPAGQTYVDAGYEVDKIAQN 182
Query: 201 FDNVWIQFY------------NNPLAQCQYSSGNTN--DILSSWNTWT-SSTTAGKIFLG 245
D V + Y N+PL + Q SG ++ ++ W T A K+ LG
Sbjct: 183 LDFVNLMAYDFHGSWEKVTGHNSPLYKRQEESGAAASLNVDAAVQQWLQKGTPASKLILG 242
Query: 246 LP 247
+P
Sbjct: 243 MP 244
>6EPB-A nrPDB
Length = 423
Score = 40.8 bits (94), Expect = 7e-04, Method: Composition-based stats.
Identities = 38/179 (21%), Positives = 62/179 (34%), Gaps = 32/179 (17%)
Query: 96 KDIKVLMSIGGGAGDYSLVSEADADNFADYLWNNFLGGQSSSRPLGDAVLDGIDFDIELG 155
+ +KVL+SIGG + S A D N +++ + D DGID D E
Sbjct: 120 RGLKVLLSIGGWTWSTNFPSAASTDA------NRKNFAKTAITFMKDWGFDGIDIDWEYP 173
Query: 156 TTTF-----------YDTLARALSSRSTQAAKVYLT-AAPQCPHPDSHLDAALNTGLFDN 203
+ A +++ LT AAP S L A + D
Sbjct: 174 ADATQASNMILLLKEVRSQLDAYAAQYAPGYHFLLTIAAPAGKDNYSKLRLADLGQVLDY 233
Query: 204 VWIQFYNNPLAQCQYSSGNTNDILS-------SWNTWTS-------STTAGKIFLGLPA 248
+ + Y+ + + + N + +NT ++ A KI LG+P
Sbjct: 234 INLMAYDYAGSFSPLTGHDANLFNNPSNPNATPFNTDSAVKDYINGGVPANKIVLGMPI 292
>5Y29-A nrPDB
Length = 377
Score = 40.5 bits (93), Expect = 0.001, Method: Composition-based stats.
Identities = 37/208 (17%), Positives = 64/208 (30%), Gaps = 42/208 (20%)
Query: 72 LAGHCDPAAGTCTGLSDEIRSCQGKDIKVLMSIGG---GAGDYSLVSEADADNFADYLWN 128
+ H + + + IKV +++GG AGD D A ++ +
Sbjct: 52 MTAHDTWSDYDNRFYERVVEY-KRYGIKVSLALGGWNDSAGDKYSKLVNDPAARAKFVQH 110
Query: 129 NFLGGQSSSRPLGDAVLDGIDFDIELG-------------TTTFYDTLARALSSRSTQAA 175
L DG+D D E + L LS+
Sbjct: 111 AVAF-------LEKYGFDGLDLDWEYPKCWQVDCSKGPDSDKQGFADLVHELSAVLKP-K 162
Query: 176 KVYLTAA--PQCPHPDSHLDAALNTGLFDNVWIQFYNNPLAQCQYSSGNTNDILSSWNTW 233
+ L+AA P D+ D + L D + + Y+ +G+ + +
Sbjct: 163 GLLLSAAVSPNKMVIDAGYDVPVLARLLDWIAVMTYDYHGQW-DKKTGHVAPLYYHPDDD 221
Query: 234 TS--------------STTAGKIFLGLP 247
T+ T A KI +G+P
Sbjct: 222 TTYFNANYTIHYWMEKGTPASKIVMGMP 249
>6F8N-A nrPDB
Length = 414
Score = 39.7 bits (91), Expect = 0.002, Method: Composition-based stats.
Identities = 35/215 (16%), Positives = 64/215 (29%), Gaps = 28/215 (13%)
Query: 75 HCDPAAGTCTGLSDEIRSCQGKDIKVLMSIGGGAGDYSLVSEADADNFADYLWNNFLGGQ 134
+ P L +R Q ++KVL+S+GG + A A++ A ++ +
Sbjct: 71 YLSPKVMADLQLLPVLR-KQNPELKVLLSVGGWGARGFSGAAATAESRAVFI-------R 122
Query: 135 SSSRPLGDAVLDGIDFDIELGTTTFYD-------------TLARALSSRSTQAAKVYLTA 181
S + + LDGID D + + L L + + +
Sbjct: 123 SVQQVIKQYHLDGIDLDWQYPVNGAWGLVESQPADRANFTLLLAELHKALDKGKLLTIAV 182
Query: 182 APQCPHPDSHLDAALNTGLFDNVWIQFYNNPLAQCQYSSGNTNDILSSWNTWTSSTTAGK 241
P +D D + + Y+ Y + N L W + A +
Sbjct: 183 GANVKSPQEWVDVKGIAPYLDYINLMTYDMA-----YGTQYFNSNLYDSKQWPTVAAADR 237
Query: 242 IFLGLPAAPEAAGSGYIPPDVLTGQILPQIKTSAK 276
A + P L I + +
Sbjct: 238 YSANFVVDNYLAAG--LKPAQLNLGIGFYGRVPKR 270
>3CHF-A nrPDB
Length = 433
Score = 38.1 bits (87), Expect = 0.005, Method: Composition-based stats.
Identities = 58/288 (20%), Positives = 90/288 (31%), Gaps = 91/288 (31%)
Query: 93 CQGKDIKVLMSIGG--GAGDYSLVSEADA--DNFADYLWNNFLGGQSSSRPLGDAVLDGI 148
Q +++KVL+SIGG + +++ + DA NFA +++ + L D DG+
Sbjct: 123 KQNRNLKVLLSIGGWTYSPNFAPAASTDAGRKNFA----------KTAVKLLQDLGFDGL 172
Query: 149 DFDIELGTTTF-----------YDTLARALSSRSTQAAKVYLT-AAPQCPHPDSHLDAAL 196
D D E T + S+ + LT A+P P L
Sbjct: 173 DIDWEYPENDQQANDFVLLLKEVRTALDSYSAANAGGQHFLLTVASPAGPDKIKVLHLKD 232
Query: 197 NTGLFDNVWIQFYNNPLAQCQYSSGNT-------NDILSSWNTWTS-------STTAGKI 242
D + Y+ + S N + + +NT T+ A KI
Sbjct: 233 MDQQLDFWNLMAYDYAGSFSSLSGHQANVYNDTSNPLSTPFNTQTALDLYRAGGVPANKI 292
Query: 243 FLGLP------AAPEAAGSGY-----------------IPPDVLTGQILPQIKTSAKY-- 277
LG+P A + G Y +P T +LP I S Y
Sbjct: 293 VLGMPLYGRSFANTDGPGKPYNGVGQGSWENGVWDYKALPQAGATEHVLPDIMASYSYDA 352
Query: 278 --------------------------GGVMLYSKFYDTTYSTTIKDQV 299
GG M + D T S ++ V
Sbjct: 353 TNKFLISYDNPQVANLKSGYIKSLGLGGAMWWDSSSDKTGSDSLITTV 400
>5XWF-A nrPDB
Length = 378
Score = 37.0 bits (84), Expect = 0.011, Method: Composition-based stats.
Identities = 37/201 (18%), Positives = 64/201 (31%), Gaps = 48/201 (23%)
Query: 84 TGLSDEIRSCQGKDIKVLMSIGGGAGDYSLV----SEADADNFADYLWNNFLGGQSSSRP 139
+ L ++ + + +S+GG G S + DNF L +
Sbjct: 44 SQLKSVVQEAHSRGKSISLSVGGWTGSLYFSDLLKSSSSFDNFVSNLVDV---------- 93
Query: 140 LGDAVLDGIDFDIE--------------LGTTTFYDTLARALSSRSTQAAKVYLTAAPQC 185
+ + LDG++ D E T Y L +AL + + + TA P
Sbjct: 94 VKEYDLDGLNLDWEYPNSPNGVACNSKDENDTANYLKLFKALREK-LGSKTILTTAVPTA 152
Query: 186 PHPDSHLDAALN-----TGLFDNVWIQFY------------NNPLAQCQYSSG-NTNDIL 227
P D + + D +I Y N PL +G
Sbjct: 153 PFNDENQQPSTKLDDNWASTVDAFYIMAYDVNGIRDKNAGANAPLYYSPKVTGVEPTSGN 212
Query: 228 SSWNTWTSS-TTAGKIFLGLP 247
+ W ++ A ++ LG+P
Sbjct: 213 DAVKAWIAAGIPAEQLVLGVP 233
>3RM8-A nrPDB
Length = 395
Score = 36.6 bits (83), Expect = 0.013, Method: Composition-based stats.
Identities = 32/174 (18%), Positives = 56/174 (32%), Gaps = 41/174 (23%)
Query: 140 LGDAVLDGIDFDIEL----GTTTF----YDTLARALSSRSTQ------AAKVYLTAAPQC 185
L DG+DFD E G+ + L + + Q ++ +TAA
Sbjct: 106 LRQYEFDGLDFDWEYPGSRGSPPQDKHLFTVLVQEMREAFEQEAKQINKPRLMVTAAVAA 165
Query: 186 PH--PDSHLDAALNTGLFDNVWIQFY------------NNPLAQCQYSSG-----NTNDI 226
S + + D + + Y N+PL + +G N + +
Sbjct: 166 GISNIQSGYEIPQLSQYLDYIHVMTYDLHGSWEGYTGENSPLYKYPTDTGSNAYLNVDYV 225
Query: 227 LSSWNTWTSSTTAGKIFLGLP------AAPEAAGSGYIPPDVLTGQILPQIKTS 274
++ W + A K+ +G P + +G P G P K S
Sbjct: 226 MNYWKD--NGAPAEKLIVGFPTYGHNFILSNPSNTGIGAPTSGAGPAGPYAKES 277
>4RL3-A nrPDB
Length = 272
Score = 36.6 bits (83), Expect = 0.013, Method: Composition-based stats.
Identities = 47/216 (21%), Positives = 82/216 (37%), Gaps = 27/216 (12%)
Query: 88 DEIRSCQGKDIKVLMSIGGGAGDYSLVSEADADNFADYLWNNFLGGQSSSRPLGDAVLDG 147
I++ Q ++KV++S+GG S + A + + ++ N S + LDG
Sbjct: 64 QAIKA-QHSNVKVMVSLGGDTISGS-PVQFTATSVSSWVANAVSSLTSL---INQYHLDG 118
Query: 148 IDFDIEL----GTTTFYDTLARALSSRSTQAAKVYLTAAPQCPHPDSHLDAALN---TGL 200
ID D E T+TF + + ++ + AP + AL + +
Sbjct: 119 IDIDYEHFDQVSTSTFVSCIGQLITQLKANNVISVASIAPFDGVESQY--TALFGQYSSV 176
Query: 201 FDNVWIQFYNNPLAQCQYSSGNTNDILSSWNTWTSSTTAGKIFLGLPAAPEAAGSGYIPP 260
D V QFY Y +G + S +T A K G + G P
Sbjct: 177 IDLVNFQFY-------SYGAGTSASQYVSL----YNTAASKYGGGAKVLASFSTGGVGPA 225
Query: 261 DVLTGQILPQIKTSAKYGGVMLYSKFYDTTYSTTIK 296
Q+K+S G+ ++S D +Y+++ K
Sbjct: 226 PSTVLSACQQLKSSGTLPGIFIFS--ADGSYASSAK 259
>3AQU-A nrPDB
Length = 356
Score = 36.2 bits (82), Expect = 0.019, Method: Composition-based stats.
Identities = 45/231 (19%), Positives = 79/231 (34%), Gaps = 37/231 (16%)
Query: 47 DTGRYAYVIVSFVTTFGNFRAPVVNLAGHCDPAAGTCTGLSDEIRSCQGKDIKVLMSIGG 106
D+ + ++ +F N + V ++ P T T + +K L+SIGG
Sbjct: 22 DSSLFTHLFCAFADL--NSQTNQVTVSSANQPKFSTFTQTVQR----RNPSVKTLLSIGG 75
Query: 107 GAGDYS-----LVSEADADNFADYLWNNFLGGQSSSRPLGDAVLDGIDFDIELGTTTF-- 159
G D + + +F D SS R G+D D E ++
Sbjct: 76 GIADKTAYASMASNPTSRKSFID----------SSIRVARSYGFHGLDLDWEYPSSATEM 125
Query: 160 --YDTLARALS------SRSTQAAKVYLTAAP---QCPHPDSHLDAALNTGLFDNVWIQF 208
+ TL R + S+ ++ L AA + + +A+ + L D V +
Sbjct: 126 TNFGTLLREWRSAVVAEASSSGKPRLLLAAAVFYSNNYYSVLYPVSAVASSL-DWVNLMA 184
Query: 209 YNNPLAQCQYSSGNTNDILSSWNTWTSSTTAGKIFL--GLPAAPEAAGSGY 257
Y+ +G + N S + ++ GLPA G Y
Sbjct: 185 YDFYGPGWSRVTGPPAALFDPSNAGPSGDAGTRSWIQAGLPAKKAVLGFPY 235
>5Y2C-A nrPDB
Length = 383
Score = 35.1 bits (79), Expect = 0.038, Method: Composition-based stats.
Identities = 38/220 (17%), Positives = 73/220 (33%), Gaps = 49/220 (22%)
Query: 86 LSDEIRSCQGKDIKVLMSIGGGAGDYSLVSEADADNFADYLWNNFLGGQS----SSRPLG 141
+++ + + +KVL+ +GG + A + L NN + + L
Sbjct: 62 FYEKVTALKSHGVKVLLGLGGW--------DDSAGDKYSRLVNNVSARRKFVVHAVDFLE 113
Query: 142 DAVLDGIDFD----------IELGTTT---FYDTLARALSSRSTQAAKVYLTAAPQCP-- 186
DG+D D E G + + L + L + + L+AA
Sbjct: 114 QYGFDGLDLDWLYPKCWQVECEKGPDSDKQGFADLVKELRKAFNR-RGMLLSAAVSASKR 172
Query: 187 HPDSHLDAALNTGLFDNVWIQFYNNPLAQCQYSSG-------------NTNDILSSWNTW 233
D + + D + + Y+ +G NT ++ + N W
Sbjct: 173 VIDYAYNVPALSMNLDWISLMTYDYHGQW-DKKTGHVAPMYVHDKDTDNTFNVNFTVNYW 231
Query: 234 TSSTTA-GKIFLGLP------AAPEAAGSGYIPPDVLTGQ 266
+ K+ +G+P + E AG+G P G+
Sbjct: 232 INKGADRKKLVVGVPFYGQSFSVVEGAGTGLGAPTYAGGE 271
>6MDV-A nrPDB
Length = 802
Score = 33.9 bits (76), Expect = 0.076, Method: Composition-based stats.
Identities = 24/134 (17%), Positives = 51/134 (38%), Gaps = 31/134 (23%)
Query: 141 GDAVLDGIDFDIELGTTTF------------YDTLARALSSRSTQAAKVYLTAAPQCPHP 188
D +DG+D DIE T + +A+ + + +K+ +
Sbjct: 132 TDRGVDGLDIDIEHEFTNKRTPEEDARALNVFKEIAQLIGKNGSDKSKLLI--------M 183
Query: 189 DSHL---DAALNTGL---FDNVWIQFYNNPLAQCQYSSGNTNDILSSWNTWTSSTTAGKI 242
D+ L + + G+ D + Q+Y + + + + N++ WN + + A +
Sbjct: 184 DTTLSVENNPIFKGIAEDLDYLLRQYYGSQGGEAEVDTINSD-----WNQYQNYIDASQF 238
Query: 243 FLGLPAAPEAAGSG 256
+G E+A G
Sbjct: 239 MIGFSFFEESASKG 252
>1NAR-A nrPDB
Length = 290
Score = 33.9 bits (76), Expect = 0.087, Method: Composition-based stats.
Identities = 32/193 (16%), Positives = 68/193 (35%), Gaps = 14/193 (7%)
Query: 98 IKVLMSIGGGAGDYSLVSEADADNFADYLWNNFLGGQSSSRPLGDAVLDGIDFDIEL-GT 156
+KV++SIGG + + ++ + L Q S G+ ++DGID E +
Sbjct: 78 VKVVISIGGRGVNTPFDPAEENVWVSNAKESLKLIIQKYSDDSGN-LIDGIDIHYEHIRS 136
Query: 157 TTFYDTLARALSSRSTQAAKV---YLTAAPQCPHPDSHLDAALNTGLFDNV-WIQF-YNN 211
+ TL L + + + ++ AP + + L D + W+ + ++N
Sbjct: 137 DEPFATLMGQLITELKKDDDLNINVVSIAPSENNSSHY--QKLYNAKKDYINWVDYQFSN 194
Query: 212 PLAQCQYSSGNTNDILSSWNTWTSSTTAGKIFLGLPAAPEAAGSGYIPPDVLTGQILPQI 271
+ + + + K+ G P I D+ G ++
Sbjct: 195 QQKPVS----TDDAFVEIFKSLEKDYHPHKVLPGFSTDPLDTKHNKITRDIFIGGC-TRL 249
Query: 272 KTSAKYGGVMLYS 284
+ GV ++
Sbjct: 250 VQTFSLPGVFFWN 262
>1KFW-A nrPDB
Length = 435
Score = 32.8 bits (73), Expect = 0.20, Method: Composition-based stats.
Identities = 46/262 (17%), Positives = 76/262 (29%), Gaps = 52/262 (19%)
Query: 61 TFGNFRAPVVNLAGHCDPAAGTCTGLSDEIRSCQGKD--IKVLMSIGGGAGDYSLVS--- 115
FG A +++G D G ++++ + K+ +KV++S+GG +
Sbjct: 79 DFGMGYAADKSVSGKADTWDQPLAGSFNQLKQLKAKNPKLKVMISLGGWTWSKNFSKAAA 138
Query: 116 -EADADNFADYLWNNFLGG------QSSSRPLGDAVLDGIDFDIE----------LGTTT 158
EA + ++ G + DGID D E G T
Sbjct: 139 TEASRQKLVSSCIDLYIKGNLPNFEGRGGAGAAAGIFDGIDIDWEWPGTNSGLAGNGVDT 198
Query: 159 FYD------TLARALSSRSTQA----AKVYLTA-APQCP--HPDSHLDAALNTGLFDNVW 205
D LA K L+A P P D N D
Sbjct: 199 VNDRANFKALLAEFRKQLDAYGSTNNKKYVLSAFLPANPADIDAGGWDDPANFKSLDFGS 258
Query: 206 IQFYNNPLAQCQYSSGNTNDILSSWNTWTSSTTAGKIFLGLPAAPEAAGSGYIPPDVLTG 265
IQ Y+ A +G+ ++ PA P A + +
Sbjct: 259 IQGYDLHGAWNPTLTGHQANLYDD-----------------PADPRAPSKKFSADKAVKK 301
Query: 266 QILPQIKTSAKYGGVMLYSKFY 287
+ I G+ Y + +
Sbjct: 302 YLAAGIDPKQLGLGLAAYGRGW 323
>5GZU-A nrPDB
Length = 885
Score = 32.0 bits (71), Expect = 0.35, Method: Composition-based stats.
Identities = 39/186 (20%), Positives = 67/186 (36%), Gaps = 37/186 (19%)
Query: 97 DIKVLMSIGG---GAGDYSLVSEADADNFADYLWNNFLGGQSSSRPLGDAVLDGIDFDIE 153
++KVL+SIGG + ++ + FA+ + + LDGID D E
Sbjct: 109 NLKVLVSIGGWEAEGFSDAALTPESREVFANSALDF----------MNKYNLDGIDLDWE 158
Query: 154 LGTTTFYDT-----------------LARALSSRSTQAAKVY---LTAAPQCPHPDSHLD 193
+ L L ++ST K Y + A + DS
Sbjct: 159 YPVYGAWGVIKSRPEDKANFTALLKLLREKLDAQSTTTNKYYELAIAAGASKTYTDSVEL 218
Query: 194 AALNTGLFDNVWIQFYNNPLAQCQYSSGNTNDILSSWNTWTSSTTAGKIFL--GLPAAPE 251
+ T D + + Y+ +S +T + S+ N S + K++L G+PA
Sbjct: 219 TKI-TPYLDYINLMTYDLHGGWDPATSHHT-AVYSATNNQLSVDSTVKLYLNNGVPAEKL 276
Query: 252 AAGSGY 257
G +
Sbjct: 277 MVGGAF 282
>3W4R-A nrPDB
Length = 554
Score = 32.0 bits (71), Expect = 0.35, Method: Composition-based stats.
Identities = 49/244 (20%), Positives = 77/244 (31%), Gaps = 45/244 (18%)
Query: 34 GQNGGEGTLASTCDTGRYAYVIVSFVTTFGNFRAPVVNLAGHCDPAAGTCTGLSDEIRSC 93
G+ G E C Y+++ V+ T P +++ + +
Sbjct: 42 GRYGIEDIPVDMCTHIIYSFIGVTEDTQQVLIIDPELDVDKNGFKNFTSLRSKHP----- 96
Query: 94 QGKDIKVLMSIGGGAGDYSLVSEADADNFADYLWNNFLGGQSSSRPLGDAVLDGIDFDIE 153
+K +++GG A S S+ A A F+ +S L DG+D D E
Sbjct: 97 ---GVKFTVAVGGWAEGGSKYSKMVA---AKSTRMAFV--RSVVDFLNKYNFDGLDLDWE 148
Query: 154 LGTTT----------FYDTLARAL-SSRSTQAAKVYLTAA--------------PQ-CPH 187
+ L + L + + LTAA P+ C
Sbjct: 149 YPGAADRGGSFSDKDKFLYLVQELRRAFIREGKGWELTAAVPLANFRLMEGYHVPELCQE 208
Query: 188 PDS----HLDAALNTGLFDNVWIQFYNNPLAQCQYSSGNTNDILSSWNTWTSSTTAGKIF 243
D+ D N F +V Y P Q Y N ND L W K+
Sbjct: 209 LDAIHVMSYDLRGNWAGFADVHSPLYKRPHDQWAYEKLNVNDGLQLWED--KGCPTNKLV 266
Query: 244 LGLP 247
+G+P
Sbjct: 267 VGIP 270
>3G6L-A nrPDB
Length = 406
Score = 31.6 bits (70), Expect = 0.41, Method: Composition-based stats.
Identities = 36/183 (19%), Positives = 61/183 (33%), Gaps = 32/183 (17%)
Query: 96 KDIKVLMSIGGGAGDYSLVSEADADNFADYLWNNFLGGQSSSRPLGDAVLDGIDFDIE-- 153
+ +K+++SIGG + + A + +++ + D DGID D E
Sbjct: 103 RSLKIMLSIGGWTWSTNFPAAASTEATRATF------AKTAVEFMKDWGFDGIDVDWEYP 156
Query: 154 ------LGTTTFYDTLARALSSRSTQ---AAKVYLT-AAPQCPHPDSHLDAALNTGLFDN 203
+ + L S S L+ AAP P + L A + DN
Sbjct: 157 ASETDANNMVLLLQRVRQELDSYSATYANGYHFQLSIAAPAGPSHYNVLKLAQLGSVLDN 216
Query: 204 VWIQFYNNPLAQCQY---------SSGNTNDILSSWNTWT-----SSTTAGKIFLGLPAA 249
+ + Y+ + S+ N + S + A KI LG+P
Sbjct: 217 INLMAYDYAGSWDSVSGHQTNLYPSTSNPSSTPFSTKAAVDAYIAAGVPASKIILGMPIY 276
Query: 250 PEA 252
A
Sbjct: 277 GRA 279
>4W5U-B nrPDB
Length = 408
Score = 30.8 bits (68), Expect = 0.68, Method: Composition-based stats.
Identities = 31/143 (21%), Positives = 47/143 (32%), Gaps = 25/143 (17%)
Query: 33 WG---QNGGEGTLASTCDTGRYAYVIVSFVT-------------TFGNFRAPVVNLAGHC 76
WG +N L ++ + ++ +F + +++G
Sbjct: 50 WGTYDRNFNVKNLDTSGTAAKITHINYAFGNVTGGKCAIGDSYADYDKAFTADQSVSGQA 109
Query: 77 DPAAGTCTGLSDEIRSCQGK--DIKVLMSIGGGAGDYSLVSEA-DADNFADYLWNNFLGG 133
D G +++R + K IKVL S GG A D FA +N
Sbjct: 110 DTWDQPLRGNFNQLRQLKAKYPHIKVLWSFGGWTWSGGFADAAKDPQGFAQSCYNL---- 165
Query: 134 QSSSRPLGDAVLDGIDFDIELGT 156
P D V DGID D E
Sbjct: 166 --VHDPRWDGVFDGIDIDWEYPN 186
>3WD0-A nrPDB
Length = 503
Score = 30.8 bits (68), Expect = 0.74, Method: Composition-based stats.
Identities = 25/132 (18%), Positives = 44/132 (33%), Gaps = 14/132 (10%)
Query: 47 DTGRYAYVIVSFVTTFGNFRAPVVNLAGHCDPAAGTCTG--LSDEIRSCQGKD--IKVLM 102
+ ++ SF+ NL DPA + + + + + + ++++
Sbjct: 44 KAKQLTHINFSFLDI-------NSNLECAWDPATNDAKARDVVNRLTALKAHNPSLRIMF 96
Query: 103 SIGG--GAGDYSLVSEADADNFADYLWNNFLGGQSSSRPLGDAVLDGIDFDIELGTTTFY 160
SIGG + D + + QS R + D DG+D D E
Sbjct: 97 SIGGWYYSNDLGVSHANYVNAVKTPAARTKFA-QSCVRIMKDYGFDGVDIDWEYPQAAEV 155
Query: 161 DTLARALSSRST 172
D AL T
Sbjct: 156 DGFIAALQEIRT 167
>4URI-A nrPDB
Length = 337
Score = 30.8 bits (68), Expect = 0.80, Method: Composition-based stats.
Identities = 52/300 (17%), Positives = 95/300 (31%), Gaps = 56/300 (18%)
Query: 32 YWGQNGGEGTLASTCDTGRYAYVIVSFVTTFGNFRAPVVNLAGHCDPAAGTCTGLSDEIR 91
YW G G S + + ++ +F N ++ + A + + +R
Sbjct: 6 YW--YSGSGLAVSDINPSHFTHLFCAFADLDPNTNKLTISSSN-----AAAFSTFTQTVR 58
Query: 92 SCQGKDIKVLMSIGGGA----GDYSLVSEADADNFADYLWNNFLGGQSSSRPLGDAVLDG 147
+ + +K L+SIGGG + A ++ ++ + ++ G
Sbjct: 59 A-KNPSVKTLLSIGGGGGRALAAVFANMASQASRRKSFIDSSIQLARRNN-------FHG 110
Query: 148 IDFDIELGTTTF----YDTLARALSS------RSTQAAKVYLTAAP----QCPHPDSHLD 193
+D D E ++ + +L R + ++ + L+AA Q +
Sbjct: 111 LDLDWEYPSSDIDKTNFASLIREWRAAVATESSTSGTPALLLSAAVGGSDQITPLKYYPG 170
Query: 194 AALNTGLFDNVWIQFYN-----------NPLAQCQYSSGNTNDILSSWNTWTSSTTAGKI 242
A+ L D V + Y+ P A Y G + S K+
Sbjct: 171 EAIANNL-DWVNVMTYDLYTSDSYPTLTQPPAPLFYPRGIFSADEGITKWIQSGVPESKL 229
Query: 243 FLGLPAA------PEAAGSGYIPPDVLTGQILPQIKTSA--KYGGVMLYSKFYDTTYSTT 294
LGLP + G P Q L +K GG + + Y T Y
Sbjct: 230 ALGLPFYGFKWRLSDPNNHGLFAPAT---QGLGAVKYKDIVNTGGQVEFDSTYVTNYRFK 286
>1KRH-A nrPDB
Length = 338
Score = 30.4 bits (67), Expect = 0.84, Method: Composition-based stats.
Identities = 12/64 (18%), Positives = 22/64 (34%), Gaps = 2/64 (3%)
Query: 35 QNGGEGTLASTCDTGRYAYVIVSFVTTF--GNFRAPVVNLAGHCDPAAGTCTGLSDEIRS 92
+ G GT + C++G Y +++ LA C P + +
Sbjct: 42 REGECGTCRAFCESGNYDMPEDNYIEDALTPEEAQQGYVLACQCRPTSDAVFQIQASSEV 101
Query: 93 CQGK 96
C+ K
Sbjct: 102 CKTK 105
>4QAV-A nrPDB
Length = 415
Score = 30.1 bits (66), Expect = 1.2, Method: Composition-based stats.
Identities = 36/202 (17%), Positives = 62/202 (30%), Gaps = 28/202 (13%)
Query: 26 AGDIAIYWGQNGGEGTLASTCDTGRYAYVIVSFVTTFGNFRAPVVNLAGHCDPAAGTCTG 85
+G + I G G + S C TG +A + + +G+ + +AG + A T
Sbjct: 145 SGHVTILKGYRGPSYGMVSACTTGAHAIGNSARLIKYGDA---DIMVAGGAEGAIST--- 198
Query: 86 LSDEIRSCQGKDIKVLMSIGGGAGDYSLVSEADADNFADYLWNNFLGGQSSSRPLGDAVL 145
+ +GG A +L + D A W+ G G VL
Sbjct: 199 ----------------LGVGGFAAMKALSTRNDDPATASRPWDKGRDGFVIGEGAGILVL 242
Query: 146 DGIDFDIELGTTTFYDTLARALSSRSTQAAKVYLTAAPQCPHPDSHLDAALNTGLFDNVW 205
+ ++E A + ++ Y AP P + AL +
Sbjct: 243 E----ELEHAKKRGAKIYAEIVG--FGMSSDAYHITAPNEEGPALAVTRALKDAGINPED 296
Query: 206 IQFYNNPLAQCQYSSGNTNDIL 227
+ + N N L
Sbjct: 297 VDYVNAHGTSTPLGDANETKAL 318
>1EOM-A nrPDB
Length = 290
Score = 30.1 bits (66), Expect = 1.4, Method: Composition-based stats.
Identities = 24/88 (27%), Positives = 35/88 (39%), Gaps = 25/88 (28%)
Query: 78 PAAGTCTGLSDEIRSCQGKDIKVLMSIGGGAGDYSLVSEADADNFADYLWNNFLGGQSSS 137
+ + L +IRS Q + IKVL +I + D ++ GG +S+
Sbjct: 60 GSFKSYKDLDTQIRSLQSRGIKVLQNI-----------DDDV-----SWQSSKPGGFASA 103
Query: 138 RPLGDAV---------LDGIDFDIELGT 156
GDA+ LDGI DIE
Sbjct: 104 AAYGDAIKSIVIDKWKLDGISLDIEHSG 131
>4TXG-A nrPDB
Length = 793
Score = 30.1 bits (66), Expect = 1.4, Method: Composition-based stats.
Identities = 29/159 (18%), Positives = 44/159 (27%), Gaps = 40/159 (25%)
Query: 97 DIKVLMSIGG--GAGDYSLVSEADADNFADYLWNNFLGGQ-----------SSSRPLGDA 143
+K L+S+GG G Y + + Y G S+ L
Sbjct: 245 GVKTLISVGGWAETGGYFDANGKRVASGGFYSMTVNADGTVNQAGINAFSDSAVAFLRKY 304
Query: 144 VLDGIDFDIELGT---------------------TTFYDTLARALSSR-----STQAAKV 177
DG+D D E T Y L + L R +
Sbjct: 305 GFDGVDIDFEYPTSMNNAGNPLDWTFSNARLGSLNKGYVALLQTLRDRLDRAAAQDGRYY 364
Query: 178 YLTAA-PQCPHPDSHLDAALNTGLFDNVWIQFYNNPLAQ 215
+TAA P + ++ D V + Y+ A
Sbjct: 365 QITAAVPASGYLLRGMETFQGLKYLDFVNVMSYDLHGAW 403
>5A9Q-8 nrPDB
Length = 656
Score = 29.3 bits (64), Expect = 2.3, Method: Composition-based stats.
Identities = 13/31 (41%), Positives = 19/31 (61%)
Query: 122 FADYLWNNFLGGQSSSRPLGDAVLDGIDFDI 152
+A + FLGG+SS PL + +L +FDI
Sbjct: 327 YAQSSLDLFLGGESSPEPLDNILLAAFEFDI 357
>6FOS-2 nrPDB
Length = 222
Score = 29.3 bits (64), Expect = 2.4, Method: Composition-based stats.
Identities = 11/54 (20%), Positives = 20/54 (37%)
Query: 87 SDEIRSCQGKDIKVLMSIGGGAGDYSLVSEADADNFADYLWNNFLGGQSSSRPL 140
EI+ C+ + VL I G + + + L N F+ + + L
Sbjct: 80 EAEIKHCRVAMLAVLGVIAQEFGTFDFYNAKSKLQLSPDLHNQFVQNGALQQIL 133
>5ZGB-2 nrPDB
Length = 199
Score = 29.3 bits (64), Expect = 2.4, Method: Composition-based stats.
Identities = 11/54 (20%), Positives = 20/54 (37%)
Query: 87 SDEIRSCQGKDIKVLMSIGGGAGDYSLVSEADADNFADYLWNNFLGGQSSSRPL 140
EI+ C+ + VL I G + + + L N F+ + + L
Sbjct: 57 EAEIKHCRVAMLAVLGVIAQEFGTFDFYNAKSKLQLSPDLHNQFVQNGALQQIL 110
>3GVX-A nrPDB
Length = 290
Score = 28.9 bits (63), Expect = 2.5, Method: Composition-based stats.
Identities = 10/39 (25%), Positives = 15/39 (38%), Gaps = 3/39 (7%)
Query: 138 RPLGDAVLDGIDFDIELGTTTFYDTLARALSSRSTQAAK 176
R + VLDG D +YD A+ + R +
Sbjct: 14 REIAKTVLDGFDL---HWYPDYYDAEAQVIKDRYVLGKR 49
>4OKD-A nrPDB
Length = 840
Score = 28.9 bits (63), Expect = 3.0, Method: Composition-based stats.
Identities = 9/46 (19%), Positives = 18/46 (39%), Gaps = 1/46 (2%)
Query: 59 VTTFGNFRAPVVNLAGHCDPAAGTCTGLSDEIRSCQGKDIKVLMSI 104
V F + G PA +C ++ C + I+V++ +
Sbjct: 299 VNYFSPMGRFSAAV-GQGAPARASCDEFKQLVKECHRRGIEVILDV 343
>3RD8-A nrPDB
Length = 489
Score = 28.1 bits (61), Expect = 4.9, Method: Composition-based stats.
Identities = 13/57 (22%), Positives = 23/57 (40%), Gaps = 2/57 (3%)
Query: 92 SCQGKDIKVLMSIGGGAGDYSLVSEADADNFADYLWNNFLGGQSSSRPLGDAVLDGI 148
+CQ ++ GG +G + L A L +F + SR + +DG+
Sbjct: 356 ACQVVGNDAAIAFGGASGAFELN--VYIPMMARNLLESFTLLSNVSRLFAERCIDGL 410
>2EBN-A nrPDB
Length = 289
Score = 27.4 bits (59), Expect = 7.4, Method: Composition-based stats.
Identities = 21/66 (31%), Positives = 28/66 (42%), Gaps = 12/66 (18%)
Query: 90 IRSCQGKDIKVLMSIGG--GAGDYSLVSEADADNFADYLWNNFLGGQSSSRPLGDAVLDG 147
++ Q K IKV++SI G + +S A A FA L N LDG
Sbjct: 77 LKPLQDKGIKVILSILGNHDRSGIANLSTARAKAFAQELKNTC----------DLYNLDG 126
Query: 148 IDFDIE 153
+ FD E
Sbjct: 127 VFFDDE 132
>1EO7-A nrPDB
Length = 686
Score = 27.4 bits (59), Expect = 7.6, Method: Composition-based stats.
Identities = 18/84 (21%), Positives = 36/84 (42%), Gaps = 6/84 (7%)
Query: 48 TGRYAYVIVSFVTTFGNFRAPVVNLAGHCDPAAGTCTGLSDEIRSCQGKDIKVLMSIGGG 107
Y+ + S V + +PA GT + I + K+IKV++
Sbjct: 81 ENIYSIINYSGVNNTAYHGYWARDFKKT-NPAYGTIADFQNLIAAAHAKNIKVIIDF--- 136
Query: 108 AGDYSLVSEADADNFADY--LWNN 129
A +++ + +D +FA+ L++N
Sbjct: 137 APNHTSPASSDQPSFAENGRLYDN 160
Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta
Posted date: Jan 3, 2023 9:05 PM
Number of letters in database: 10,336,785
Number of sequences in database: 36,641
Lambda K H
0.310 0.131 0.367
Lambda K H
0.267 0.0404 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 11,493,086
Number of Sequences: 36641
Number of extensions: 448391
Number of successful extensions: 1415
Number of sequences better than 10.0: 56
Number of HSP's better than 10.0 without gapping: 41
Number of HSP's successfully gapped in prelim test: 43
Number of HSP's that attempted gapping in prelim test: 1244
Number of HSP's gapped (non-prelim): 90
length of query: 299
length of database: 10,336,785
effective HSP length: 96
effective length of query: 203
effective length of database: 6,819,249
effective search space: 1384307547
effective search space used: 1384307547
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.3 bits)
S2: 59 (27.4 bits)