BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.


Reference for composition-based statistics starting in round 2:
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,  
Eugene V. Koonin, and Stephen F. Altschul (2001), 
"Improving the accuracy of PSI-BLAST protein database searches with 
composition-based statistics and other refinements",  Nucleic Acids Res. 29:2994-3005.

Query= F4JL28
         (234 letters)

Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta 
           36,641 sequences; 10,336,785 total letters

Searching..................................................done


Results from round 1


                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

5Z8L-A nrPDB                                                          487   e-138
5ZNP-A nrPDB                                                          309   8e-85
1W4S-A nrPDB                                                           64   8e-11
2F6J-A nrPDB                                                           58   3e-09
2FUI-A nrPDB                                                           55   3e-08
4BB7-A nrPDB                                                           46   2e-05
2M3H-A nrPDB                                                           43   1e-04
1WEM-A nrPDB                                                           42   2e-04
3PT9-A nrPDB                                                           40   0.001
5WLF-A nrPDB                                                           39   0.002
6MZD-C nrPDB                                                           38   0.004
5XFN-A nrPDB                                                           33   0.15 
3T8S-A nrPDB                                                           30   0.86 
6MLC-A nrPDB                                                           30   0.87 
4BXZ-X nrPDB                                                           29   1.6  
5K4L-A nrPDB                                                           28   2.5  
6EQN-B nrPDB                                                           28   3.8  

>5Z8L-A nrPDB
          Length = 234

 Score =  487 bits (1254), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 232/234 (99%), Positives = 232/234 (99%)

Query: 1   MAKTRPGVASKIKTGRKELDSYTIKGTNKVVRAGDCVLMRPSDAGKPPYVARVEKIEADA 60
           MAKTRPGVASKIKTGRKELDSYTIKGTNKVVRAGDCVLMRPSDAGKPPYVARVEKIEADA
Sbjct: 1   MAKTRPGVASKIKTGRKELDSYTIKGTNKVVRAGDCVLMRPSDAGKPPYVARVEKIEADA 60

Query: 61  RNNVKVHCRWYYRPEESLGGRRQFHGAKELFLSDHFDVQSAHTIEGKCIVHTFKNYTRLE 120
           RNNVKVHCRWYYRPEESLGGRRQFHGAKELFLSDHFDVQSAHTIEGKCIVHTFKNYTRLE
Sbjct: 61  RNNVKVHCRWYYRPEESLGGRRQFHGAKELFLSDHFDVQSAHTIEGKCIVHTFKNYTRLE 120

Query: 121 NVGAEDYYCRFEYKAATGAFTPDRVAVYCKCEMPYNPDDLMVQCEGCKDWYHPACVGMTI 180
           NVGAEDYYCRFEYKAATGAFTPDRVAVYCKCEMPYNPDDLMVQCEGCKDWYHPACVGMTI
Sbjct: 121 NVGAEDYYCRFEYKAATGAFTPDRVAVYCKCEMPYNPDDLMVQCEGCKDWYHPACVGMTI 180

Query: 181 EEAKKLDHFVCAECSSDDDVKKSQNGFTSSPADDVKVRLSLFSHLLYRCSITYL 234
           EEAKKLDHFVCAECSSDDDV  SQNGFTSSPADDVKVRLSLFSHLLYRCSITYL
Sbjct: 181 EEAKKLDHFVCAECSSDDDVAASQNGFTSSPADDVKVRLSLFSHLLYRCSITYL 234


>5ZNP-A nrPDB
          Length = 216

 Score =  309 bits (791), Expect = 8e-85,   Method: Compositional matrix adjust.
 Identities = 139/205 (67%), Positives = 168/205 (81%), Gaps = 2/205 (0%)

Query: 10  SKIKTGRKELDSYTIKGTNKVVRAGDCVLMRPSDAGKPPYVARVEKIEADARN-NVKVHC 68
           +K K  R+ LDSYT+K  NK V+ GDCVLMRPSD  KP YVA++E+IE+D R  NV+V  
Sbjct: 3   AKAKAPRRTLDSYTVKPINKTVKPGDCVLMRPSDPSKPSYVAKIERIESDGRGPNVRVRV 62

Query: 69  RWYYRPEESLGGRRQFHGAKELFLSDHFDVQSAHTIEGKCIVHTFKNYTRLENVGAEDYY 128
           RWYYRPEES+GGRRQFHG+KE+FLSDH+D QSA TIEGKC+VH+FKNYT+L+ VG +D++
Sbjct: 63  RWYYRPEESIGGRRQFHGSKEVFLSDHYDTQSADTIEGKCMVHSFKNYTKLDAVGNDDFF 122

Query: 129 CRFEYKAATGAFTPDRVAVYCKCEMPYNPDDLMVQCEGCKDWYHPACVGMTIEEAKKLDH 188
           CRFEY ++TGAF PDRVAVYCKCEMPYNPDDLMVQCEGC DW+HPAC+ M+ EEAK+LDH
Sbjct: 123 CRFEYNSSTGAFNPDRVAVYCKCEMPYNPDDLMVQCEGCSDWFHPACIEMSAEEAKRLDH 182

Query: 189 FVCAECSSDDDVKKSQNGFTSSPAD 213
           F C  CSS+   KK QN   +  +D
Sbjct: 183 FFCENCSSEGQ-KKLQNSHNTRQSD 206


>1W4S-A nrPDB
          Length = 174

 Score = 63.5 bits (153), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 39/136 (28%), Positives = 66/136 (48%), Gaps = 3/136 (2%)

Query: 28  NKVVRAGDCVLMRPSDAGKPPYVARVEKIEADARNNVKVHCRWYYRPEESLGGRRQFHGA 87
           N +   GD V + P++A   P++  +E++  D+     ++  W+YRP E+     +    
Sbjct: 24  NSMYHVGDYVYVEPAEANLQPHIVCIERLWEDSAGEKWLYGCWFYRPNETFHLATRKFLE 83

Query: 88  KELFLSDHFDVQSAHTIEGKCIVHTFKNYTRL--ENVGAED-YYCRFEYKAATGAFTPDR 144
           KE+F SD+++      I GKC+V   K Y +L  EN   ED Y C   Y A T +F   +
Sbjct: 84  KEVFKSDYYNKVPVSKILGKCVVMFVKEYFKLCPENFRDEDVYVCESRYSAKTKSFKKIK 143

Query: 145 VAVYCKCEMPYNPDDL 160
           +       + + P D+
Sbjct: 144 LWTMPVSSVRFVPRDV 159


>2F6J-A nrPDB
          Length = 174

 Score = 58.2 bits (139), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 27/79 (34%), Positives = 43/79 (54%), Gaps = 1/79 (1%)

Query: 147 VYCKCEMPYNPDDLMVQCEGCKDWYHPACVGMTIEEAKKLDHFVCAECSSDDDVKKSQNG 206
           +YC C+ PY+     + C+ C++WYH  CVG+   EA+ +D +VC +C S +D       
Sbjct: 9   LYCICKTPYDESKFYIGCDRCQNWYHGRCVGILQSEAELIDEYVCPQCQSTEDAMTVLTP 68

Query: 207 FTSSPADDVK-VRLSLFSH 224
            T    + +K V  SL +H
Sbjct: 69  LTEKDYEGLKRVLRSLQAH 87


>2FUI-A nrPDB
          Length = 62

 Score = 55.1 bits (131), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 21/54 (38%), Positives = 34/54 (62%)

Query: 147 VYCKCEMPYNPDDLMVQCEGCKDWYHPACVGMTIEEAKKLDHFVCAECSSDDDV 200
           +YC C+ PY+     + C+ C++WYH  CVG+   EA+ +D +VC +C S +D 
Sbjct: 9   LYCICKTPYDESKFYIGCDRCQNWYHGRCVGILQSEAELIDEYVCPQCQSTEDA 62


>4BB7-A nrPDB
          Length = 258

 Score = 45.8 bits (107), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 38/189 (20%), Positives = 69/189 (36%), Gaps = 13/189 (6%)

Query: 27  TNKVVRAGDCVLMRPSDAGKPPYVARVEKIEADARNNVKVHCRWYYRPEESLGGRRQFHG 86
            N     GD  L+R  +  + P V ++ ++         ++  WYYRPE+++    +   
Sbjct: 23  NNISYHVGDWALLRNQNDPQKPIVGQIFRLWKTPDGKQWLNACWYYRPEQTVHRVDRLFY 82

Query: 87  AKELFLSDHFDVQSAHTIEGKCIVHTFKNYTRLE---NVGAEDYYCRFEYKAATGAFTPD 143
             E+  +  +       + GKC V  F  Y R      +    + C F Y  +   F   
Sbjct: 83  KNEVMKTGQYRDHLVSNLVGKCYVIHFTRYQRGNPDMKLEGPLFVCEFRYNESDKIFNKI 142

Query: 144 RVAVYCKCEMPYNPDDLMVQCEGCKDWYHPACVGMTIEEAKKLDHFVCAECSSDDDVKKS 203
           R    C  E   + D+  +   G K + +P+ +           H + A  +  D V + 
Sbjct: 143 RTWKACLPEEIRDLDEATIPVNGRKFFKYPSPIR----------HLLPANATPHDRVPEP 192

Query: 204 QNGFTSSPA 212
             G   +P 
Sbjct: 193 TMGSPDAPP 201


>2M3H-A nrPDB
          Length = 61

 Score = 42.7 bits (99), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 19/62 (30%), Positives = 36/62 (58%), Gaps = 7/62 (11%)

Query: 138 GAFTPDRVAVYCKCEMPYNPDDLMVQCEGCKDWYHPACVGMTIEEAKKLDH----FVCAE 193
           G+  P+  A+YC C  P+N +  M+ C+ C++W+H  CVG++    + L+     ++C  
Sbjct: 1   GSMDPN--ALYCICRQPHN-NRFMICCDRCEEWFHGDCVGISEARGRLLERNGEDYICPN 57

Query: 194 CS 195
           C+
Sbjct: 58  CT 59


>1WEM-A nrPDB
          Length = 76

 Score = 42.4 bits (98), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 18/57 (31%), Positives = 33/57 (57%), Gaps = 5/57 (8%)

Query: 143 DRVAVYCKCEMPYNPDDLMVQCEGCKDWYHPACVGMTIEEAKKLDH----FVCAECS 195
           D  A+YC C  P+N +  M+ C+ C++W+H  CVG++    + L+     ++C  C+
Sbjct: 13  DPNALYCICRQPHN-NRFMICCDRCEEWFHGDCVGISEARGRLLERNGEDYICPNCT 68


>3PT9-A nrPDB
          Length = 873

 Score = 40.0 bits (92), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 20/65 (30%), Positives = 31/65 (47%), Gaps = 2/65 (3%)

Query: 7  GVASKIKTGRKELDSYTIKGTNKVVRAGDCVLMRPSDAGKPPYVARVEKIEADARNNVKV 66
          G   KI+  R      +I    +++  GDCV + P D+ KP Y+ARV  +  D    +  
Sbjct: 9  GQPMKIEENRTYYQKVSID--EEMLEVGDCVSVIPDDSSKPLYLARVTALWEDKNGQMMF 66

Query: 67 HCRWY 71
          H  W+
Sbjct: 67 HAHWF 71


>5WLF-A nrPDB
          Length = 62

 Score = 38.5 bits (88), Expect = 0.002,   Method: Composition-based stats.
 Identities = 14/33 (42%), Positives = 23/33 (69%), Gaps = 1/33 (3%)

Query: 147 VYCKCEMPYNPDDLMVQCEGCKDWYHPACVGMT 179
           ++C C  P+N +  M+ C+ C+DW+H  CVG+T
Sbjct: 7   LWCICRQPHN-NRFMICCDLCEDWFHGTCVGVT 38


>6MZD-C nrPDB
          Length = 929

 Score = 37.7 bits (86), Expect = 0.004,   Method: Composition-based stats.
 Identities = 16/42 (38%), Positives = 25/42 (59%), Gaps = 3/42 (7%)

Query: 157 PDD--LMVQCEGCKDWYHPACVGMTIEEAKKLDHFVCAECSS 196
           PDD   M+ C+ C DWYH  CVG+     +++  F C +C++
Sbjct: 874 PDDGSPMIGCDDCDDWYHWPCVGIMTAPPEEMQWF-CPKCAN 914


>5XFN-A nrPDB
          Length = 316

 Score = 32.7 bits (73), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 17/52 (32%), Positives = 22/52 (42%)

Query: 143 DRVAVYCKCEMPYNPDDLMVQCEGCKDWYHPACVGMTIEEAKKLDHFVCAEC 194
           +R   YC C  P   +  M+QC  C  W+H AC     +     D F   EC
Sbjct: 159 NRQQSYCYCGGPGEWNLKMLQCRSCLQWFHEACTQCLSKPLLYGDRFYEFEC 210


>3T8S-A nrPDB
          Length = 585

 Score = 30.0 bits (66), Expect = 0.86,   Method: Compositional matrix adjust.
 Identities = 22/86 (25%), Positives = 39/86 (45%), Gaps = 14/86 (16%)

Query: 22  YTIKGTNKVVRAGDCVLMRPSDAGKPPYVARVEKIEADARNNVK-VHC----------RW 70
           Y ++     V  GD V++ P +AG+P + +  + ++    N V  V+C          +W
Sbjct: 165 YKLRSIGDSVVIGDKVVLNPVNAGQPLHASSHQLVDNPGCNEVNSVNCNTSWKIVLFMKW 224

Query: 71  YYRPEESLGGR---RQFHGAKELFLS 93
               ++ L G    R FH  +E FL+
Sbjct: 225 SDNKDDILKGGDVVRLFHAEQEKFLT 250


>6MLC-A nrPDB
          Length = 92

 Score = 30.0 bits (66), Expect = 0.87,   Method: Compositional matrix adjust.
 Identities = 11/28 (39%), Positives = 15/28 (53%)

Query: 155 YNPDDLMVQCEGCKDWYHPACVGMTIEE 182
           Y  +DL++QC  C  W H  C  +  EE
Sbjct: 42  YREEDLILQCRQCDRWMHAVCQNLNTEE 69


>4BXZ-X nrPDB
          Length = 594

 Score = 29.3 bits (64), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 9/16 (56%), Positives = 11/16 (68%)

Query: 161 MVQCEGCKDWYHPACV 176
           MVQC+GC  W H  C+
Sbjct: 94  MVQCDGCDTWQHIKCM 109


>5K4L-A nrPDB
          Length = 790

 Score = 28.5 bits (62), Expect = 2.5,   Method: Compositional matrix adjust.
 Identities = 13/43 (30%), Positives = 25/43 (58%), Gaps = 1/43 (2%)

Query: 156 NPDDLMVQCEGCKDWYHPACVGMTIEEAKKLDHFVCAECSSDD 198
           N +D ++ C+GC D YH  C+   + +  K D + C +C +++
Sbjct: 293 NNEDKLLLCDGCDDSYHTFCLIPPLPDVPKGD-WRCPKCVAEE 334


>6EQN-B nrPDB
          Length = 425

 Score = 28.1 bits (61), Expect = 3.8,   Method: Compositional matrix adjust.
 Identities = 12/41 (29%), Positives = 23/41 (56%)

Query: 29 KVVRAGDCVLMRPSDAGKPPYVARVEKIEADARNNVKVHCR 69
          + V+  D VL R    G+P  + R +++E    NN+K++ +
Sbjct: 57 RYVKIPDEVLERYLQVGRPTPIIRAKRLEEYLGNNIKIYLK 97


Searching..................................................done


Results from round 2


                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value
Sequences used in model and found again:

5Z8L-A nrPDB                                                          380   e-106
5ZNP-A nrPDB                                                          288   1e-78
4BB7-A nrPDB                                                          245   1e-65
1W4S-A nrPDB                                                          189   6e-49
2F6J-A nrPDB                                                          109   1e-24
3PT9-A nrPDB                                                           97   6e-21
2FUI-A nrPDB                                                           84   5e-17
1WEM-A nrPDB                                                           76   1e-14
2M3H-A nrPDB                                                           76   2e-14

Sequences not found previously or not previously below threshold:

5WLF-A nrPDB                                                           56   1e-08
4FT4-B nrPDB                                                           48   3e-06
6MZD-C nrPDB                                                           44   6e-05
3UV2-A nrPDB                                                           40   0.001
5XFN-A nrPDB                                                           34   0.062
4BXZ-X nrPDB                                                           32   0.15 
1WEN-A nrPDB                                                           31   0.44 
1WEU-A nrPDB                                                           31   0.53 
5K4L-A nrPDB                                                           30   0.61 
2KU7-A nrPDB                                                           30   0.64 
3LQJ-A nrPDB                                                           30   1.1  
2VNF-A nrPDB                                                           29   1.3  
6MLC-A nrPDB                                                           29   2.2  
2RSD-A nrPDB                                                           29   2.2  
2KYU-A nrPDB                                                           28   3.7  

>5Z8L-A nrPDB
          Length = 234

 Score =  380 bits (975), Expect = e-106,   Method: Composition-based stats.
 Identities = 232/234 (99%), Positives = 232/234 (99%)

Query: 1   MAKTRPGVASKIKTGRKELDSYTIKGTNKVVRAGDCVLMRPSDAGKPPYVARVEKIEADA 60
           MAKTRPGVASKIKTGRKELDSYTIKGTNKVVRAGDCVLMRPSDAGKPPYVARVEKIEADA
Sbjct: 1   MAKTRPGVASKIKTGRKELDSYTIKGTNKVVRAGDCVLMRPSDAGKPPYVARVEKIEADA 60

Query: 61  RNNVKVHCRWYYRPEESLGGRRQFHGAKELFLSDHFDVQSAHTIEGKCIVHTFKNYTRLE 120
           RNNVKVHCRWYYRPEESLGGRRQFHGAKELFLSDHFDVQSAHTIEGKCIVHTFKNYTRLE
Sbjct: 61  RNNVKVHCRWYYRPEESLGGRRQFHGAKELFLSDHFDVQSAHTIEGKCIVHTFKNYTRLE 120

Query: 121 NVGAEDYYCRFEYKAATGAFTPDRVAVYCKCEMPYNPDDLMVQCEGCKDWYHPACVGMTI 180
           NVGAEDYYCRFEYKAATGAFTPDRVAVYCKCEMPYNPDDLMVQCEGCKDWYHPACVGMTI
Sbjct: 121 NVGAEDYYCRFEYKAATGAFTPDRVAVYCKCEMPYNPDDLMVQCEGCKDWYHPACVGMTI 180

Query: 181 EEAKKLDHFVCAECSSDDDVKKSQNGFTSSPADDVKVRLSLFSHLLYRCSITYL 234
           EEAKKLDHFVCAECSSDDDV  SQNGFTSSPADDVKVRLSLFSHLLYRCSITYL
Sbjct: 181 EEAKKLDHFVCAECSSDDDVAASQNGFTSSPADDVKVRLSLFSHLLYRCSITYL 234


>5ZNP-A nrPDB
          Length = 216

 Score =  288 bits (738), Expect = 1e-78,   Method: Composition-based stats.
 Identities = 139/205 (67%), Positives = 168/205 (81%), Gaps = 2/205 (0%)

Query: 10  SKIKTGRKELDSYTIKGTNKVVRAGDCVLMRPSDAGKPPYVARVEKIEADARN-NVKVHC 68
           +K K  R+ LDSYT+K  NK V+ GDCVLMRPSD  KP YVA++E+IE+D R  NV+V  
Sbjct: 3   AKAKAPRRTLDSYTVKPINKTVKPGDCVLMRPSDPSKPSYVAKIERIESDGRGPNVRVRV 62

Query: 69  RWYYRPEESLGGRRQFHGAKELFLSDHFDVQSAHTIEGKCIVHTFKNYTRLENVGAEDYY 128
           RWYYRPEES+GGRRQFHG+KE+FLSDH+D QSA TIEGKC+VH+FKNYT+L+ VG +D++
Sbjct: 63  RWYYRPEESIGGRRQFHGSKEVFLSDHYDTQSADTIEGKCMVHSFKNYTKLDAVGNDDFF 122

Query: 129 CRFEYKAATGAFTPDRVAVYCKCEMPYNPDDLMVQCEGCKDWYHPACVGMTIEEAKKLDH 188
           CRFEY ++TGAF PDRVAVYCKCEMPYNPDDLMVQCEGC DW+HPAC+ M+ EEAK+LDH
Sbjct: 123 CRFEYNSSTGAFNPDRVAVYCKCEMPYNPDDLMVQCEGCSDWFHPACIEMSAEEAKRLDH 182

Query: 189 FVCAECSSDDDVKKSQNGFTSSPAD 213
           F C  CSS+   KK QN   +  +D
Sbjct: 183 FFCENCSSEGQ-KKLQNSHNTRQSD 206


>4BB7-A nrPDB
          Length = 258

 Score =  245 bits (625), Expect = 1e-65,   Method: Composition-based stats.
 Identities = 38/189 (20%), Positives = 69/189 (36%), Gaps = 13/189 (6%)

Query: 27  TNKVVRAGDCVLMRPSDAGKPPYVARVEKIEADARNNVKVHCRWYYRPEESLGGRRQFHG 86
            N     GD  L+R  +  + P V ++ ++         ++  WYYRPE+++    +   
Sbjct: 23  NNISYHVGDWALLRNQNDPQKPIVGQIFRLWKTPDGKQWLNACWYYRPEQTVHRVDRLFY 82

Query: 87  AKELFLSDHFDVQSAHTIEGKCIVHTFKNYTRLE---NVGAEDYYCRFEYKAATGAFTPD 143
             E+  +  +       + GKC V  F  Y R      +    + C F Y  +   F   
Sbjct: 83  KNEVMKTGQYRDHLVSNLVGKCYVIHFTRYQRGNPDMKLEGPLFVCEFRYNESDKIFNKI 142

Query: 144 RVAVYCKCEMPYNPDDLMVQCEGCKDWYHPACVGMTIEEAKKLDHFVCAECSSDDDVKKS 203
           R    C  E   + D+  +   G K + +P+ +           H + A  +  D V + 
Sbjct: 143 RTWKACLPEEIRDLDEATIPVNGRKFFKYPSPIR----------HLLPANATPHDRVPEP 192

Query: 204 QNGFTSSPA 212
             G   +P 
Sbjct: 193 TMGSPDAPP 201


>1W4S-A nrPDB
          Length = 174

 Score =  189 bits (481), Expect = 6e-49,   Method: Composition-based stats.
 Identities = 41/154 (26%), Positives = 70/154 (45%), Gaps = 5/154 (3%)

Query: 16  RKELDSYTIKGTNKVVRAGDCVLMRPSDAGKPPYVARVEKIEADARNNVKVHCRWYYRPE 75
           R      + K  N +   GD V + P++A   P++  +E++  D+     ++  W+YRP 
Sbjct: 14  RTYSQDCSFK--NSMYHVGDYVYVEPAEANLQPHIVCIERLWEDSAGEKWLYGCWFYRPN 71

Query: 76  ESLGGRRQFHGAKELFLSDHFDVQSAHTIEGKCIVHTFKNYTRL--ENVGAED-YYCRFE 132
           E+     +    KE+F SD+++      I GKC+V   K Y +L  EN   ED Y C   
Sbjct: 72  ETFHLATRKFLEKEVFKSDYYNKVPVSKILGKCVVMFVKEYFKLCPENFRDEDVYVCESR 131

Query: 133 YKAATGAFTPDRVAVYCKCEMPYNPDDLMVQCEG 166
           Y A T +F   ++       + + P D+ +    
Sbjct: 132 YSAKTKSFKKIKLWTMPVSSVRFVPRDVPLPVVR 165


>2F6J-A nrPDB
          Length = 174

 Score =  109 bits (272), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 27/79 (34%), Positives = 43/79 (54%), Gaps = 1/79 (1%)

Query: 147 VYCKCEMPYNPDDLMVQCEGCKDWYHPACVGMTIEEAKKLDHFVCAECSSDDDVKKSQNG 206
           +YC C+ PY+     + C+ C++WYH  CVG+   EA+ +D +VC +C S +D       
Sbjct: 9   LYCICKTPYDESKFYIGCDRCQNWYHGRCVGILQSEAELIDEYVCPQCQSTEDAMTVLTP 68

Query: 207 FTSSPADDVK-VRLSLFSH 224
            T    + +K V  SL +H
Sbjct: 69  LTEKDYEGLKRVLRSLQAH 87


>3PT9-A nrPDB
          Length = 873

 Score = 97.1 bits (240), Expect = 6e-21,   Method: Composition-based stats.
 Identities = 28/106 (26%), Positives = 43/106 (40%), Gaps = 4/106 (3%)

Query: 7   GVASKIKTGRKELDSYTIKGTNKVVRAGDCVLMRPSDAGKPPYVARVEKIEADARNNVKV 66
           G   KI+  R      +I    +++  GDCV + P D+ KP Y+ARV  +  D    +  
Sbjct: 9   GQPMKIEENRTYYQKVSID--EEMLEVGDCVSVIPDDSSKPLYLARVTALWEDKNGQMMF 66

Query: 67  HCRWYYRPEESLGGRRQFHGAKELFLSDHFDVQSAHTIEGKCIVHT 112
           H  W+    +++ G        ELFL    +      I  K  V  
Sbjct: 67  HAHWFCAGTDTVLGATSDPL--ELFLVGECENMQLSYIHSKVKVIY 110


>2FUI-A nrPDB
          Length = 62

 Score = 84.0 bits (206), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 21/54 (38%), Positives = 34/54 (62%)

Query: 147 VYCKCEMPYNPDDLMVQCEGCKDWYHPACVGMTIEEAKKLDHFVCAECSSDDDV 200
           +YC C+ PY+     + C+ C++WYH  CVG+   EA+ +D +VC +C S +D 
Sbjct: 9   LYCICKTPYDESKFYIGCDRCQNWYHGRCVGILQSEAELIDEYVCPQCQSTEDA 62


>1WEM-A nrPDB
          Length = 76

 Score = 75.9 bits (185), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 18/57 (31%), Positives = 33/57 (57%), Gaps = 5/57 (8%)

Query: 143 DRVAVYCKCEMPYNPDDLMVQCEGCKDWYHPACVGMTIEEAKKLDH----FVCAECS 195
           D  A+YC C  P+N +  M+ C+ C++W+H  CVG++    + L+     ++C  C+
Sbjct: 13  DPNALYCICRQPHN-NRFMICCDRCEEWFHGDCVGISEARGRLLERNGEDYICPNCT 68


>2M3H-A nrPDB
          Length = 61

 Score = 75.6 bits (184), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 19/62 (30%), Positives = 36/62 (58%), Gaps = 7/62 (11%)

Query: 138 GAFTPDRVAVYCKCEMPYNPDDLMVQCEGCKDWYHPACVGMTIEEAKKLDH----FVCAE 193
           G+  P+  A+YC C  P+N +  M+ C+ C++W+H  CVG++    + L+     ++C  
Sbjct: 1   GSMDPN--ALYCICRQPHN-NRFMICCDRCEEWFHGDCVGISEARGRLLERNGEDYICPN 57

Query: 194 CS 195
           C+
Sbjct: 58  CT 59


>5WLF-A nrPDB
          Length = 62

 Score = 55.9 bits (133), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 17/57 (29%), Positives = 31/57 (54%), Gaps = 5/57 (8%)

Query: 142 PDRVAVYCKCEMPYNPDDLMVQCEGCKDWYHPACVGMTIEEAKKLDH----FVCAEC 194
           P    ++C C  P+N +  M+ C+ C+DW+H  CVG+T      +++    + C +C
Sbjct: 2   PLPNKLWCICRQPHN-NRFMICCDLCEDWFHGTCVGVTKAMGTDMENKGIDWKCPKC 57


>4FT4-B nrPDB
          Length = 784

 Score = 48.2 bits (113), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 28/153 (18%), Positives = 53/153 (34%), Gaps = 15/153 (9%)

Query: 2   AKTRPGVASKIKTGRKELDSYTIKGTNKVVRAGDCVLMRPSDAGKPPYVARVEKIEADAR 61
           A  +P    ++K  R    S  +   N V   GD V ++  +  +  Y+ R+ +      
Sbjct: 32  AAKKPDEEEELKA-RCHYRSAKVD--NVVYCLGDDVYVKAGE-NEADYIGRITEFFEGTD 87

Query: 62  NNVKVHCRWYYRPEES-------LGGRRQFHGAKELFLSDHFDVQSAHTIEGKCIVHTFK 114
                 CRW++R E++       +      H  + +FLS+  +      I  K  +    
Sbjct: 88  QCHYFTCRWFFRAEDTVINSLVSISVDGHKHDPRRVFLSEEKNDNVLDCIISKVKIVHVD 147

Query: 115 NYT----RLENVGAEDYYCRFEYKAATGAFTPD 143
                  + + + + D Y    Y  A   F   
Sbjct: 148 PNMDPKAKAQLIESCDLYYDMSYSVAYSTFANI 180


>6MZD-C nrPDB
          Length = 929

 Score = 44.0 bits (102), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 14/53 (26%), Positives = 28/53 (52%), Gaps = 2/53 (3%)

Query: 143 DRVAVYCKCEMPYNPDDLMVQCEGCKDWYHPACVGMTIEEAKKLDHFVCAECS 195
           +++ +   C  P +    M+ C+ C DWYH  CVG+     +++  + C +C+
Sbjct: 863 NQIWICPGCNKPDDGSP-MIGCDDCDDWYHWPCVGIMTAPPEEM-QWFCPKCA 913


>3UV2-A nrPDB
          Length = 126

 Score = 39.7 bits (91), Expect = 0.001,   Method: Composition-based stats.
 Identities = 9/33 (27%), Positives = 14/33 (42%), Gaps = 1/33 (3%)

Query: 193 ECSSDDDVKKSQNGFTSSPADDVK-VRLSLFSH 224
           +C S +D        T    + +K V  SL +H
Sbjct: 3   QCQSTEDAMTVLTPLTEKDYEGLKRVLRSLQAH 35


>5XFN-A nrPDB
          Length = 316

 Score = 34.0 bits (76), Expect = 0.062,   Method: Composition-based stats.
 Identities = 17/52 (32%), Positives = 22/52 (42%)

Query: 143 DRVAVYCKCEMPYNPDDLMVQCEGCKDWYHPACVGMTIEEAKKLDHFVCAEC 194
           +R   YC C  P   +  M+QC  C  W+H AC     +     D F   EC
Sbjct: 159 NRQQSYCYCGGPGEWNLKMLQCRSCLQWFHEACTQCLSKPLLYGDRFYEFEC 210


>4BXZ-X nrPDB
          Length = 594

 Score = 32.4 bits (72), Expect = 0.15,   Method: Composition-based stats.
 Identities = 24/102 (23%), Positives = 31/102 (30%), Gaps = 31/102 (30%)

Query: 143 DRVAVYCKC---EMPYNPDDL----MVQCEGCKDWYHPACVGMTIEEAKKL----DHFVC 191
           D   V C C      Y+  +     MVQC+GC  W H  C+    +    L      + C
Sbjct: 69  DEGYVRCLCGANNENYDAAEYSHGDMVQCDGCDTWQHIKCMTDGKDTIDGLMSEDSKYYC 128

Query: 192 AECSS--------------------DDDVKKSQNGFTSSPAD 213
             C                       DDV K  N    + AD
Sbjct: 129 ELCDPSLYAHLETSKEAEVSEDEDYHDDVYKPVNDHDDNDAD 170


>1WEN-A nrPDB
          Length = 71

 Score = 30.9 bits (68), Expect = 0.44,   Method: Composition-based stats.
 Identities = 17/54 (31%), Positives = 25/54 (46%), Gaps = 8/54 (14%)

Query: 147 VYCKCEMPYNPDDLMVQCEG--CK-DWYHPACVGMTIEEAKKLDHFVCAECSSD 197
            YC C      +  M+ C+   C  +W+H ACVG+T    K    + C  CS +
Sbjct: 17  TYCLCHQVSYGE--MIGCDNPDCSIEWFHFACVGLT---TKPRGKWFCPRCSQE 65


>1WEU-A nrPDB
          Length = 91

 Score = 30.9 bits (68), Expect = 0.53,   Method: Composition-based stats.
 Identities = 17/54 (31%), Positives = 25/54 (46%), Gaps = 8/54 (14%)

Query: 147 VYCKCEMPYNPDDLMVQCEG--CK-DWYHPACVGMTIEEAKKLDHFVCAECSSD 197
            YC C      +  M+ C+   C  +W+H ACVG+T    K    + C  CS +
Sbjct: 37  TYCLCHQVSYGE--MIGCDNPDCSIEWFHFACVGLT---TKPRGKWFCPRCSQE 85


>5K4L-A nrPDB
          Length = 790

 Score = 30.5 bits (67), Expect = 0.61,   Method: Composition-based stats.
 Identities = 17/76 (22%), Positives = 35/76 (46%), Gaps = 2/76 (2%)

Query: 123 GAEDYYCRFEYKAATGAFTPDRVAVYCKCEMPYNPDDLMVQCEGCKDWYHPACVGMTIEE 182
            ++ +  +   +  T +     + V   C    N D L++ C+GC D YH  C+   + +
Sbjct: 261 RSDAFNMQMRQRKGTLSVNFVDLYVCMFCGRGNNEDKLLL-CDGCDDSYHTFCLIPPLPD 319

Query: 183 AKKLDHFVCAECSSDD 198
             K D + C +C +++
Sbjct: 320 VPKGD-WRCPKCVAEE 334


>2KU7-A nrPDB
          Length = 140

 Score = 30.5 bits (67), Expect = 0.64,   Method: Composition-based stats.
 Identities = 11/41 (26%), Positives = 18/41 (43%), Gaps = 6/41 (14%)

Query: 161 MVQCEGCKDWYHPACVGMTIEEAKKLDH------FVCAECS 195
           M+QC  C  W H  C  ++ E  + L +      + C  C+
Sbjct: 2   MMQCGKCDRWVHSKCENLSDEMYEILSNLPESVAYTCVNCT 42


>3LQJ-A nrPDB
          Length = 183

 Score = 29.7 bits (65), Expect = 1.1,   Method: Composition-based stats.
 Identities = 11/41 (26%), Positives = 18/41 (43%), Gaps = 6/41 (14%)

Query: 161 MVQCEGCKDWYHPACVGMTIEEAKKLDH------FVCAECS 195
           M+QC  C  W H  C  ++ E  + L +      + C  C+
Sbjct: 21  MMQCGKCDRWVHSKCENLSDEMYEILSNLPESVAYTCVNCT 61


>2VNF-A nrPDB
          Length = 60

 Score = 29.3 bits (64), Expect = 1.3,   Method: Composition-based stats.
 Identities = 17/54 (31%), Positives = 25/54 (46%), Gaps = 8/54 (14%)

Query: 147 VYCKCEMPYNPDDLMVQCEG--CK-DWYHPACVGMTIEEAKKLDHFVCAECSSD 197
            YC C      +  M+ C+   C  +W+H ACVG+T    K    + C  CS +
Sbjct: 11  TYCLCHQVSYGE--MIGCDNPDCSIEWFHFACVGLT---TKPRGKWFCPRCSQE 59


>6MLC-A nrPDB
          Length = 92

 Score = 28.6 bits (62), Expect = 2.2,   Method: Composition-based stats.
 Identities = 12/34 (35%), Positives = 16/34 (47%)

Query: 149 CKCEMPYNPDDLMVQCEGCKDWYHPACVGMTIEE 182
             C   Y  +DL++QC  C  W H  C  +  EE
Sbjct: 36  PVCYRNYREEDLILQCRQCDRWMHAVCQNLNTEE 69


>2RSD-A nrPDB
          Length = 68

 Score = 28.6 bits (62), Expect = 2.2,   Method: Composition-based stats.
 Identities = 17/51 (33%), Positives = 22/51 (43%), Gaps = 6/51 (11%)

Query: 149 CKCEMPYNPDDLMVQCE--GCKDWYHPACVGMTI---EEAKKLDHFVCAEC 194
           C C      +D M+QCE   C+ W H  CV +     E A+    F C  C
Sbjct: 13  CICSSTMV-NDSMIQCEDQRCQVWQHLNCVLIPDKPGESAEVPPVFYCELC 62


>2KYU-A nrPDB
          Length = 67

 Score = 27.8 bits (60), Expect = 3.7,   Method: Composition-based stats.
 Identities = 11/41 (26%), Positives = 18/41 (43%), Gaps = 6/41 (14%)

Query: 161 MVQCEGCKDWYHPACVGMTIEEAKKLDH------FVCAECS 195
           M+QC  C  W H  C  ++ E  + L +      + C  C+
Sbjct: 24  MMQCGKCDRWVHSKCENLSDEMYEILSNLPESVAYTCVNCT 64


  Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta
    Posted date:  Jan 3, 2023  9:05 PM
  Number of letters in database: 10,336,785
  Number of sequences in database:  36,641
  
Lambda     K      H
   0.309    0.127    0.348 

Lambda     K      H
   0.267   0.0396    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,589,209
Number of Sequences: 36641
Number of extensions: 321916
Number of successful extensions: 774
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 34
Number of HSP's successfully gapped in prelim test: 23
Number of HSP's that attempted gapping in prelim test: 725
Number of HSP's gapped (non-prelim): 59
length of query: 234
length of database: 10,336,785
effective HSP length: 94
effective length of query: 140
effective length of database: 6,892,531
effective search space: 964954340
effective search space used: 964954340
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.2 bits)
S2: 57 (26.6 bits)