BLASTP 2.2.23 [Feb-03-2010] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= E9AE57 (568 letters) Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta 36,641 sequences; 10,336,785 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value 6MSN-A nrPDB 1188 0.0 6MSO-A nrPDB 675 0.0 5DNI-A nrPDB 103 2e-22 2ISB-A nrPDB 93 3e-19 1QGI-A nrPDB 31 1.6 1Q83-A nrPDB 31 1.7 4NL8-A nrPDB 30 2.0 1WIK-A nrPDB 30 2.5 1C5K-A nrPDB 30 2.5 1F5N-A nrPDB 30 3.1 5M2S-A nrPDB 29 5.1 5Y77-A nrPDB 28 7.6 5M2O-A nrPDB 28 7.8 5AOZ-A nrPDB 28 8.8 >6MSN-A nrPDB Length = 604 Score = 1188 bits (3074), Expect = 0.0, Method: Compositional matrix adjust. Identities = 568/568 (100%), Positives = 568/568 (100%) Query: 1 MSLCDQCEIGCRRVGIKDIEDASAVNADFHFSAIFQPTDPHHHQTEFAKVEGSEKYVEEV 60 MSLCDQCEIGCRRVGIKDIEDASAVNADFHFSAIFQPTDPHHHQTEFAKVEGSEKYVEEV Sbjct: 37 MSLCDQCEIGCRRVGIKDIEDASAVNADFHFSAIFQPTDPHHHQTEFAKVEGSEKYVEEV 96 Query: 61 EVFGRQALKVNPEALTILAHRAFSDVHHFFRKDHLEGWRRAIEDPEASDNDRYVATTLLK 120 EVFGRQALKVNPEALTILAHRAFSDVHHFFRKDHLEGWRRAIEDPEASDNDRYVATTLLK Sbjct: 97 EVFGRQALKVNPEALTILAHRAFSDVHHFFRKDHLEGWRRAIEDPEASDNDRYVATTLLK 156 Query: 121 NACIAAGRVLPSCQDTGTAIVLGKRGELCWTGGEDEKYLSKGIWNAYRYHNLRYSQTAAL 180 NACIAAGRVLPSCQDTGTAIVLGKRGELCWTGGEDEKYLSKGIWNAYRYHNLRYSQTAAL Sbjct: 157 NACIAAGRVLPSCQDTGTAIVLGKRGELCWTGGEDEKYLSKGIWNAYRYHNLRYSQTAAL 216 Query: 181 DMFKECNTGDNLPAQLDLLAVPGSDYEFLFIAKGGGSANKAYLYQETKALLNPKSLRAFI 240 DMFKECNTGDNLPAQLDLLAVPGSDYEFLFIAKGGGSANKAYLYQETKALLNPKSLRAFI Sbjct: 217 DMFKECNTGDNLPAQLDLLAVPGSDYEFLFIAKGGGSANKAYLYQETKALLNPKSLRAFI 276 Query: 241 EEKLKTLGTAACPPYHIALVIGGTSAEMTMKTVKLASCRYYDSLPTTGDKYGRAFRDPEW 300 EEKLKTLGTAACPPYHIALVIGGTSAEMTMKTVKLASCRYYDSLPTTGDKYGRAFRDPEW Sbjct: 277 EEKLKTLGTAACPPYHIALVIGGTSAEMTMKTVKLASCRYYDSLPTTGDKYGRAFRDPEW 336 Query: 301 EKIVMEVAQKSGIGAQFGGKYFAHQARVIRLPRHGASCPVGLAVSCSADRQILAHINKSG 360 EKIVMEVAQKSGIGAQFGGKYFAHQARVIRLPRHGASCPVGLAVSCSADRQILAHINKSG Sbjct: 337 EKIVMEVAQKSGIGAQFGGKYFAHQARVIRLPRHGASCPVGLAVSCSADRQILAHINKSG 396 Query: 361 IYIEQLEQNPAQYLPDIPEVHLSTTSVKVDLKRPIDKVRQQLSQYPVGTRVMLNGTLIVA 420 IYIEQLEQNPAQYLPDIPEVHLSTTSVKVDLKRPIDKVRQQLSQYPVGTRVMLNGTLIVA Sbjct: 397 IYIEQLEQNPAQYLPDIPEVHLSTTSVKVDLKRPIDKVRQQLSQYPVGTRVMLNGTLIVA 456 Query: 421 RDIAHAKIKEMMDNGEPLPEYMKTSPIYYAGPAKTPEGYASGSFGPTTAGRMDSYVDLFQ 480 RDIAHAKIKEMMDNGEPLPEYMKTSPIYYAGPAKTPEGYASGSFGPTTAGRMDSYVDLFQ Sbjct: 457 RDIAHAKIKEMMDNGEPLPEYMKTSPIYYAGPAKTPEGYASGSFGPTTAGRMDSYVDLFQ 516 Query: 481 SHGGSYITLAKGNRSKQVTDACKKHGGFYLGSIGGPAAILAKDSIKQVTCLAFPELGMEA 540 SHGGSYITLAKGNRSKQVTDACKKHGGFYLGSIGGPAAILAKDSIKQVTCLAFPELGMEA Sbjct: 517 SHGGSYITLAKGNRSKQVTDACKKHGGFYLGSIGGPAAILAKDSIKQVTCLAFPELGMEA 576 Query: 541 VWKIEVEDFPAFIVVDDKGNDMYSKTLA 568 VWKIEVEDFPAFIVVDDKGNDMYSKTLA Sbjct: 577 VWKIEVEDFPAFIVVDDKGNDMYSKTLA 604 >6MSO-A nrPDB Length = 585 Score = 675 bits (1742), Expect = 0.0, Method: Compositional matrix adjust. Identities = 322/543 (59%), Positives = 414/543 (76%), Gaps = 8/543 (1%) Query: 27 ADFHFSAIFQPTDPHHHQTEFAKVEGSEKYVEEVEVFG--RQALKVNPEALTILAHRAFS 84 A+F+F + H +T++ + ++ YV V+ + L+V+P ALT+L+ AF Sbjct: 46 AEFNFVPLVSKVS--HKETKYRLL--TKDYVSVVQPGAGLPEMLRVDPAALTLLSSTAFD 101 Query: 85 DVHHFFRKDHLEGWRRAIEDPEASDNDRYVATTLLKNACIAAGRVLPSCQDTGTAIVLGK 144 DV H R HL R+ +DPEASDND++VA LLKNA I++ R+LP CQDTGTAI+ G Sbjct: 102 DVEHLLRSSHLMSLRKIFDDPEASDNDKFVALQLLKNANISSARLLPGCQDTGTAIIAGY 161 Query: 145 RGELCWTGGEDEKYLSKGIWNAYRYHNLRYSQTAALDMFKECNTGDNLPAQLDLLAVPGS 204 RG+ + G DE+ LS+G+++ ++ N RYSQ L M+ E NTG NLPAQ+DL A G Sbjct: 162 RGDQVFVPGNDEEALSRGVYDIFQKRNFRYSQNVPLSMYDEKNTGTNLPAQIDLYASKGM 221 Query: 205 DYEFLFIAKGGGSANKAYLYQETKALLNPKSLRAFIEEKLKTLGTAACPPYHIALVIGGT 264 +Y F+F+AKGGGSANK++L QETK++LNPKSLR F++EKL GT+ACPPYH+A+VIGGT Sbjct: 222 EYSFMFVAKGGGSANKSFLLQETKSVLNPKSLRNFLKEKLAMFGTSACPPYHVAVVIGGT 281 Query: 265 SAEMTMKTVKLASCRYYDSLPTTGD-KYGRAFRDPEWEKIVMEVAQKSGIGAQFGGKYFA 323 SAEMTMK +K ASC YYD L T D K G FRD E E+ V++V Q G+GAQFGGKY+A Sbjct: 282 SAEMTMKVLKYASCHYYDDLITKPDMKTGYTFRDLELEEEVLKVCQNIGMGAQFGGKYYA 341 Query: 324 HQARVIRLPRHGASCPVGLAVSCSADRQILAHINKSGIYIEQLEQNPAQYLPDIPEVH-L 382 H RVIR+PRHGASCP+G+ VSCSADRQ L INK G+++E+LE P+QYLPD+ E L Sbjct: 342 HDVRVIRMPRHGASCPIGIGVSCSADRQALGKINKDGVWLEELEMEPSQYLPDLKEDELL 401 Query: 383 STTSVKVDLKRPIDKVRQQLSQYPVGTRVMLNGTLIVARDIAHAKIKEMMDNGEPLPEYM 442 T +V V+L RP+ +V Q+LS++PV TR+ L GT+IVARD AHA+++EM++ G+PLP+YM Sbjct: 402 KTPAVMVNLNRPMPEVLQELSKHPVRTRLSLTGTIIVARDSAHARMREMLEAGKPLPQYM 461 Query: 443 KTSPIYYAGPAKTPEGYASGSFGPTTAGRMDSYVDLFQSHGGSYITLAKGNRSKQVTDAC 502 K P+YYAGPAK P+G SGSFGPTTAGRMD +VDLFQSHGGS + LAKGNRSKQVT AC Sbjct: 462 KEHPVYYAGPAKQPDGLPSGSFGPTTAGRMDPFVDLFQSHGGSMVMLAKGNRSKQVTKAC 521 Query: 503 KKHGGFYLGSIGGPAAILAKDSIKQVTCLAFPELGMEAVWKIEVEDFPAFIVVDDKGNDM 562 K+GGFYLGSIGGPAA+LA+++IK+V CL +LGMEAVW+IEVE+FPAFIVVDDKGND Sbjct: 522 HKYGGFYLGSIGGPAAVLAQNAIKKVECLDMKDLGMEAVWRIEVENFPAFIVVDDKGNDF 581 Query: 563 YSK 565 + + Sbjct: 582 FEQ 584 >5DNI-A nrPDB Length = 179 Score = 103 bits (257), Expect = 2e-22, Method: Composition-based stats. Identities = 65/170 (38%), Positives = 96/170 (56%), Gaps = 6/170 (3%) Query: 399 RQQLSQYPVGTRVMLNGTLIVARDIAHAKIKEMMDNGEPLPEYMKTSPIYYAGP--AKTP 456 ++ + + VG V LNG + ARD AH KI EM+ + E LP + S IY+AGP K Sbjct: 10 KKDVKKLKVGDIVYLNGKIYTARDEAHLKIIEMLKSNEKLPFDLNESIIYHAGPIMKKVN 69 Query: 457 EGYASGSFGPTTAGRMDSYVDLFQSHGGSYITLAKGNRSKQVTDACKKHGGFYLGSIGGP 516 + + S GPTT+ RM+ + F + KG K++ + +G YL + GG Sbjct: 70 DSWVCVSIGPTTSARMNDVEEEFIKLTNISAIVGKGGMKKELLKTFEDYGVVYLAAPGGC 129 Query: 517 AAILAKDSIKQVTCLAF-PELGM-EAVWKIEVEDF-PAFIVVDDKGNDMY 563 AA+LA +S+K+V + F ELGM EAVW++EV +F P + +D GN +Y Sbjct: 130 AALLA-NSVKRVDNVYFLDELGMPEAVWELEVNNFGPLIVAMDSHGNSIY 178 >2ISB-A nrPDB Length = 192 Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 59/179 (32%), Positives = 94/179 (52%), Gaps = 7/179 (3%) Query: 390 DLKRPIDKVRQQLSQYPVGTRVMLNGTLIVARDIAHAKIKEMMDNGEPLPEYMKTSPIYY 449 +L+ P+ V+ Q+ + VG V + G + ARD AHA+ E M+ G+ LP +Y+ Sbjct: 18 ELRTPL--VKDQILKLKVGDVVYITGEIFTARDEAHARALEWMEEGKELPFSFDKGVVYH 75 Query: 450 AGP-AKTPEGYASGSFGPTTAGRMDSYVDLFQSHGGSYITLAKGNRSKQVTDACKKHGGF 508 GP K + + S GPTT+ RM+ + + KG S++V +A + + Sbjct: 76 CGPLVKKNDEWRVVSAGPTTSARMNPFTPKILEKVECMGIIGKGGMSEEVVEAMRGKAAY 135 Query: 509 YLGSIGGPAAILAKDSIKQVTCLAFPELGM-EAVWKIEVEDF-PAFIVVDDKGNDMYSK 565 + + G A LA SIK+V + + +LGM EAVW +EVE F P + +D GN +Y + Sbjct: 136 F--AFTGGAGALAAMSIKKVKGVVWEDLGMPEAVWLLEVERFGPCIVAIDAHGNSLYRR 192 >1QGI-A nrPDB Length = 259 Score = 30.8 bits (68), Expect = 1.6, Method: Compositional matrix adjust. Identities = 37/113 (32%), Positives = 50/113 (44%), Gaps = 19/113 (16%) Query: 439 PEYMKTSPIYYAGPAKTPE---GYASGSFGPTTAGRMDSY---VDLFQSHGGSYITLAKG 492 PE + I Y G + E GY G FG TT G D++ DLF+++ AKG Sbjct: 36 PEQDDLNWIKYYGYCEDIEDERGYTIGLFGATTGGSRDTHPDGPDLFKAYDA-----AKG 90 Query: 493 NRSKQVTDACKKHG--GFYLGSIGGPAAILAKDSIKQVTCLAFPELGMEAVWK 543 + A K+ G G GSI + KDS K V C +L +A W+ Sbjct: 91 ASNPSADGALKRLGINGKMKGSI-----LEIKDSEK-VFCGKIKKLQNDAAWR 137 >1Q83-A nrPDB Length = 580 Score = 30.8 bits (68), Expect = 1.7, Method: Compositional matrix adjust. Identities = 20/71 (28%), Positives = 30/71 (42%), Gaps = 1/71 (1%) Query: 13 RVGIKDIEDASAVNADFHFSAIFQPTDPHHHQTEFAKVEGSEKYVEEV-EVFGRQALKVN 71 R+G+ D +A H++ P DP H + + V G V V ++ GR A + Sbjct: 395 RIGVPQASDLAAEAVVLHYTDWLHPEDPTHLRDAMSAVVGDHNVVCPVAQLAGRLAAQGA 454 Query: 72 PEALTILAHRA 82 I HRA Sbjct: 455 RVYAYIFEHRA 465 >4NL8-A nrPDB Length = 747 Score = 30.4 bits (67), Expect = 2.0, Method: Compositional matrix adjust. Identities = 20/63 (31%), Positives = 33/63 (52%), Gaps = 2/63 (3%) Query: 355 HINKSGIYIEQLEQNPAQYLPDIP--EVHLSTTSVKVDLKRPIDKVRQQLSQYPVGTRVM 412 H+ GI EQLEQ A P++P + TTS K L+ + V + ++ +GT+++ Sbjct: 498 HLVPVGIGTEQLEQALAPLFPEVPISRIDRDTTSRKGALEEHLAAVHRGGARILIGTQML 557 Query: 413 LNG 415 G Sbjct: 558 AKG 560 >1WIK-A nrPDB Length = 109 Score = 30.4 bits (67), Expect = 2.5, Method: Composition-based stats. Identities = 27/97 (27%), Positives = 41/97 (42%), Gaps = 31/97 (31%) Query: 346 CSADRQILAHINKSGIYIEQLEQNPAQYLPDIPEVHLSTTSVKVDLKRPIDKVRQQL--- 402 C +QIL +N +G+ E + L D ++VRQ L Sbjct: 30 CGFSKQILEILNSTGVEYETFD-----ILED-------------------EEVRQGLKTF 65 Query: 403 SQYPVGTRVMLNGTLIVARDIAHAKIKEMMDNGEPLP 439 S +P ++ + G L+ DI +KE+ DNGE LP Sbjct: 66 SNWPTYPQLYVRGDLVGGLDI----VKELKDNGELLP 98 >1C5K-A nrPDB Length = 439 Score = 30.4 bits (67), Expect = 2.5, Method: Compositional matrix adjust. Identities = 18/67 (26%), Positives = 29/67 (43%), Gaps = 9/67 (13%) Query: 415 GTLIVARDIAHAKIKEMMDNGEPLPEYMKTSPIYYAGPAKTPEGYA---------SGSFG 465 G LI+ + HA+++ ++D+G + P +AGP PE SG F Sbjct: 11 GFLILWASVLHAEVRIVIDSGVDSGRPIGVVPFQWAGPGAAPEDIGGIVAADLRNSGKFN 70 Query: 466 PTTAGRM 472 P R+ Sbjct: 71 PLDRARL 77 >1F5N-A nrPDB Length = 592 Score = 30.0 bits (66), Expect = 3.1, Method: Compositional matrix adjust. Identities = 20/75 (26%), Positives = 35/75 (46%), Gaps = 3/75 (4%) Query: 19 IEDASAVNADFHFSAIFQPTDPHHHQTEFAKVEGSEKYVEEVEVFGRQALKVNPEALTIL 78 +E+A A SA Q H+ Q KV+ + ++E+ R + + EA+ + Sbjct: 312 MENAVLALAQIENSAAVQKAIAHYEQQMGQKVQLPTESLQELLDLHRDSER---EAIEVF 368 Query: 79 AHRAFSDVHHFFRKD 93 +F DV H F+K+ Sbjct: 369 IRSSFKDVDHLFQKE 383 >5M2S-A nrPDB Length = 149 Score = 29.3 bits (64), Expect = 5.1, Method: Composition-based stats. Identities = 17/44 (38%), Positives = 21/44 (47%), Gaps = 1/44 (2%) Query: 423 IAHAKIKEMMDNGEPL-PEYMKTSPIYYAGPAKTPEGYASGSFG 465 I A K + D GEPL P +Y PA TP+G + FG Sbjct: 72 ILGANFKSLDDKGEPLVPTKDPVFTLYVTVPATTPDGVYNVGFG 115 >5Y77-A nrPDB Length = 473 Score = 28.5 bits (62), Expect = 7.6, Method: Compositional matrix adjust. Identities = 20/74 (27%), Positives = 36/74 (48%), Gaps = 1/74 (1%) Query: 395 IDKVRQQLSQYPV-GTRVMLNGTLIVARDIAHAKIKEMMDNGEPLPEYMKTSPIYYAGPA 453 +D RQ+L+ V G R+ L++ D ++ +++ M + L E+++T P Y Sbjct: 139 VDFARQRLTLSNVSGERLEKRFHLLIGADGCNSAVRQAMASVVDLGEHLETQPHGYKELQ 198 Query: 454 KTPEGYASGSFGPT 467 TPE A + P Sbjct: 199 ITPEASAQFNLEPN 212 >5M2O-A nrPDB Length = 149 Score = 28.5 bits (62), Expect = 7.8, Method: Composition-based stats. Identities = 25/84 (29%), Positives = 36/84 (42%), Gaps = 12/84 (14%) Query: 413 LNGTLIVARDIAHAKIKEMMDNGEPL--PEYMKTSPIYYAGPAKTPEG-YASGSFGPTTA 469 N T++ I A K + D GEPL + +Y PA TP+G Y G G Sbjct: 61 FNTTVMTNMAILGANFKSLDDKGEPLVPKDGAAVFTLYVNVPANTPDGTYYVGFNGKN-- 118 Query: 470 GRMDSYVDLFQSHGGSYITLAKGN 493 ++ +S+ GS T+A N Sbjct: 119 -------EVHKSNDGSQFTVASKN 135 >5AOZ-A nrPDB Length = 169 Score = 28.5 bits (62), Expect = 8.8, Method: Composition-based stats. Identities = 25/84 (29%), Positives = 36/84 (42%), Gaps = 12/84 (14%) Query: 413 LNGTLIVARDIAHAKIKEMMDNGEPL--PEYMKTSPIYYAGPAKTPEG-YASGSFGPTTA 469 N T++ I A K + D GEPL + +Y PA TP+G Y G G Sbjct: 83 FNTTVMTNMAILGANFKSLDDKGEPLVPKDGAAVFTLYVNVPANTPDGTYYVGFNGKN-- 140 Query: 470 GRMDSYVDLFQSHGGSYITLAKGN 493 ++ +S+ GS T+A N Sbjct: 141 -------EVHKSNDGSQFTVASKN 157 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: 6MSN-A nrPDB 1048 0.0 6MSO-A nrPDB 946 0.0 2ISB-A nrPDB 256 2e-68 5DNI-A nrPDB 241 7e-64 Sequences not found previously or not previously below threshold: 1F5N-A nrPDB 33 0.46 3ICS-A nrPDB 33 0.47 3IMN-A nrPDB 31 1.2 3NBJ-A nrPDB 31 1.6 2MYF-A nrPDB 29 4.5 6F4U-A nrPDB 29 4.5 6F02-A nrPDB 29 4.5 1L9U-H nrPDB 29 4.7 CONVERGED! >6MSN-A nrPDB Length = 604 Score = 1048 bits (2711), Expect = 0.0, Method: Composition-based stats. Identities = 568/568 (100%), Positives = 568/568 (100%) Query: 1 MSLCDQCEIGCRRVGIKDIEDASAVNADFHFSAIFQPTDPHHHQTEFAKVEGSEKYVEEV 60 MSLCDQCEIGCRRVGIKDIEDASAVNADFHFSAIFQPTDPHHHQTEFAKVEGSEKYVEEV Sbjct: 37 MSLCDQCEIGCRRVGIKDIEDASAVNADFHFSAIFQPTDPHHHQTEFAKVEGSEKYVEEV 96 Query: 61 EVFGRQALKVNPEALTILAHRAFSDVHHFFRKDHLEGWRRAIEDPEASDNDRYVATTLLK 120 EVFGRQALKVNPEALTILAHRAFSDVHHFFRKDHLEGWRRAIEDPEASDNDRYVATTLLK Sbjct: 97 EVFGRQALKVNPEALTILAHRAFSDVHHFFRKDHLEGWRRAIEDPEASDNDRYVATTLLK 156 Query: 121 NACIAAGRVLPSCQDTGTAIVLGKRGELCWTGGEDEKYLSKGIWNAYRYHNLRYSQTAAL 180 NACIAAGRVLPSCQDTGTAIVLGKRGELCWTGGEDEKYLSKGIWNAYRYHNLRYSQTAAL Sbjct: 157 NACIAAGRVLPSCQDTGTAIVLGKRGELCWTGGEDEKYLSKGIWNAYRYHNLRYSQTAAL 216 Query: 181 DMFKECNTGDNLPAQLDLLAVPGSDYEFLFIAKGGGSANKAYLYQETKALLNPKSLRAFI 240 DMFKECNTGDNLPAQLDLLAVPGSDYEFLFIAKGGGSANKAYLYQETKALLNPKSLRAFI Sbjct: 217 DMFKECNTGDNLPAQLDLLAVPGSDYEFLFIAKGGGSANKAYLYQETKALLNPKSLRAFI 276 Query: 241 EEKLKTLGTAACPPYHIALVIGGTSAEMTMKTVKLASCRYYDSLPTTGDKYGRAFRDPEW 300 EEKLKTLGTAACPPYHIALVIGGTSAEMTMKTVKLASCRYYDSLPTTGDKYGRAFRDPEW Sbjct: 277 EEKLKTLGTAACPPYHIALVIGGTSAEMTMKTVKLASCRYYDSLPTTGDKYGRAFRDPEW 336 Query: 301 EKIVMEVAQKSGIGAQFGGKYFAHQARVIRLPRHGASCPVGLAVSCSADRQILAHINKSG 360 EKIVMEVAQKSGIGAQFGGKYFAHQARVIRLPRHGASCPVGLAVSCSADRQILAHINKSG Sbjct: 337 EKIVMEVAQKSGIGAQFGGKYFAHQARVIRLPRHGASCPVGLAVSCSADRQILAHINKSG 396 Query: 361 IYIEQLEQNPAQYLPDIPEVHLSTTSVKVDLKRPIDKVRQQLSQYPVGTRVMLNGTLIVA 420 IYIEQLEQNPAQYLPDIPEVHLSTTSVKVDLKRPIDKVRQQLSQYPVGTRVMLNGTLIVA Sbjct: 397 IYIEQLEQNPAQYLPDIPEVHLSTTSVKVDLKRPIDKVRQQLSQYPVGTRVMLNGTLIVA 456 Query: 421 RDIAHAKIKEMMDNGEPLPEYMKTSPIYYAGPAKTPEGYASGSFGPTTAGRMDSYVDLFQ 480 RDIAHAKIKEMMDNGEPLPEYMKTSPIYYAGPAKTPEGYASGSFGPTTAGRMDSYVDLFQ Sbjct: 457 RDIAHAKIKEMMDNGEPLPEYMKTSPIYYAGPAKTPEGYASGSFGPTTAGRMDSYVDLFQ 516 Query: 481 SHGGSYITLAKGNRSKQVTDACKKHGGFYLGSIGGPAAILAKDSIKQVTCLAFPELGMEA 540 SHGGSYITLAKGNRSKQVTDACKKHGGFYLGSIGGPAAILAKDSIKQVTCLAFPELGMEA Sbjct: 517 SHGGSYITLAKGNRSKQVTDACKKHGGFYLGSIGGPAAILAKDSIKQVTCLAFPELGMEA 576 Query: 541 VWKIEVEDFPAFIVVDDKGNDMYSKTLA 568 VWKIEVEDFPAFIVVDDKGNDMYSKTLA Sbjct: 577 VWKIEVEDFPAFIVVDDKGNDMYSKTLA 604 >6MSO-A nrPDB Length = 585 Score = 946 bits (2446), Expect = 0.0, Method: Composition-based stats. Identities = 322/543 (59%), Positives = 414/543 (76%), Gaps = 8/543 (1%) Query: 27 ADFHFSAIFQPTDPHHHQTEFAKVEGSEKYVEEVEVFG--RQALKVNPEALTILAHRAFS 84 A+F+F + H +T++ + ++ YV V+ + L+V+P ALT+L+ AF Sbjct: 46 AEFNFVPLVSKVS--HKETKYRLL--TKDYVSVVQPGAGLPEMLRVDPAALTLLSSTAFD 101 Query: 85 DVHHFFRKDHLEGWRRAIEDPEASDNDRYVATTLLKNACIAAGRVLPSCQDTGTAIVLGK 144 DV H R HL R+ +DPEASDND++VA LLKNA I++ R+LP CQDTGTAI+ G Sbjct: 102 DVEHLLRSSHLMSLRKIFDDPEASDNDKFVALQLLKNANISSARLLPGCQDTGTAIIAGY 161 Query: 145 RGELCWTGGEDEKYLSKGIWNAYRYHNLRYSQTAALDMFKECNTGDNLPAQLDLLAVPGS 204 RG+ + G DE+ LS+G+++ ++ N RYSQ L M+ E NTG NLPAQ+DL A G Sbjct: 162 RGDQVFVPGNDEEALSRGVYDIFQKRNFRYSQNVPLSMYDEKNTGTNLPAQIDLYASKGM 221 Query: 205 DYEFLFIAKGGGSANKAYLYQETKALLNPKSLRAFIEEKLKTLGTAACPPYHIALVIGGT 264 +Y F+F+AKGGGSANK++L QETK++LNPKSLR F++EKL GT+ACPPYH+A+VIGGT Sbjct: 222 EYSFMFVAKGGGSANKSFLLQETKSVLNPKSLRNFLKEKLAMFGTSACPPYHVAVVIGGT 281 Query: 265 SAEMTMKTVKLASCRYYDSLPTTGD-KYGRAFRDPEWEKIVMEVAQKSGIGAQFGGKYFA 323 SAEMTMK +K ASC YYD L T D K G FRD E E+ V++V Q G+GAQFGGKY+A Sbjct: 282 SAEMTMKVLKYASCHYYDDLITKPDMKTGYTFRDLELEEEVLKVCQNIGMGAQFGGKYYA 341 Query: 324 HQARVIRLPRHGASCPVGLAVSCSADRQILAHINKSGIYIEQLEQNPAQYLPDIPEVH-L 382 H RVIR+PRHGASCP+G+ VSCSADRQ L INK G+++E+LE P+QYLPD+ E L Sbjct: 342 HDVRVIRMPRHGASCPIGIGVSCSADRQALGKINKDGVWLEELEMEPSQYLPDLKEDELL 401 Query: 383 STTSVKVDLKRPIDKVRQQLSQYPVGTRVMLNGTLIVARDIAHAKIKEMMDNGEPLPEYM 442 T +V V+L RP+ +V Q+LS++PV TR+ L GT+IVARD AHA+++EM++ G+PLP+YM Sbjct: 402 KTPAVMVNLNRPMPEVLQELSKHPVRTRLSLTGTIIVARDSAHARMREMLEAGKPLPQYM 461 Query: 443 KTSPIYYAGPAKTPEGYASGSFGPTTAGRMDSYVDLFQSHGGSYITLAKGNRSKQVTDAC 502 K P+YYAGPAK P+G SGSFGPTTAGRMD +VDLFQSHGGS + LAKGNRSKQVT AC Sbjct: 462 KEHPVYYAGPAKQPDGLPSGSFGPTTAGRMDPFVDLFQSHGGSMVMLAKGNRSKQVTKAC 521 Query: 503 KKHGGFYLGSIGGPAAILAKDSIKQVTCLAFPELGMEAVWKIEVEDFPAFIVVDDKGNDM 562 K+GGFYLGSIGGPAA+LA+++IK+V CL +LGMEAVW+IEVE+FPAFIVVDDKGND Sbjct: 522 HKYGGFYLGSIGGPAAVLAQNAIKKVECLDMKDLGMEAVWRIEVENFPAFIVVDDKGNDF 581 Query: 563 YSK 565 + + Sbjct: 582 FEQ 584 >2ISB-A nrPDB Length = 192 Score = 256 bits (653), Expect = 2e-68, Method: Composition-based stats. Identities = 59/179 (32%), Positives = 94/179 (52%), Gaps = 7/179 (3%) Query: 390 DLKRPIDKVRQQLSQYPVGTRVMLNGTLIVARDIAHAKIKEMMDNGEPLPEYMKTSPIYY 449 +L+ P+ V+ Q+ + VG V + G + ARD AHA+ E M+ G+ LP +Y+ Sbjct: 18 ELRTPL--VKDQILKLKVGDVVYITGEIFTARDEAHARALEWMEEGKELPFSFDKGVVYH 75 Query: 450 AGP-AKTPEGYASGSFGPTTAGRMDSYVDLFQSHGGSYITLAKGNRSKQVTDACKKHGGF 508 GP K + + S GPTT+ RM+ + + KG S++V +A + + Sbjct: 76 CGPLVKKNDEWRVVSAGPTTSARMNPFTPKILEKVECMGIIGKGGMSEEVVEAMRGKAAY 135 Query: 509 YLGSIGGPAAILAKDSIKQVTCLAFPELGM-EAVWKIEVEDF-PAFIVVDDKGNDMYSK 565 + + G A LA SIK+V + + +LGM EAVW +EVE F P + +D GN +Y + Sbjct: 136 F--AFTGGAGALAAMSIKKVKGVVWEDLGMPEAVWLLEVERFGPCIVAIDAHGNSLYRR 192 >5DNI-A nrPDB Length = 179 Score = 241 bits (615), Expect = 7e-64, Method: Composition-based stats. Identities = 65/171 (38%), Positives = 96/171 (56%), Gaps = 6/171 (3%) Query: 399 RQQLSQYPVGTRVMLNGTLIVARDIAHAKIKEMMDNGEPLPEYMKTSPIYYAGP--AKTP 456 ++ + + VG V LNG + ARD AH KI EM+ + E LP + S IY+AGP K Sbjct: 10 KKDVKKLKVGDIVYLNGKIYTARDEAHLKIIEMLKSNEKLPFDLNESIIYHAGPIMKKVN 69 Query: 457 EGYASGSFGPTTAGRMDSYVDLFQSHGGSYITLAKGNRSKQVTDACKKHGGFYLGSIGGP 516 + + S GPTT+ RM+ + F + KG K++ + +G YL + GG Sbjct: 70 DSWVCVSIGPTTSARMNDVEEEFIKLTNISAIVGKGGMKKELLKTFEDYGVVYLAAPGGC 129 Query: 517 AAILAKDSIKQVTCLAF-PELGM-EAVWKIEVEDF-PAFIVVDDKGNDMYS 564 AA+LA +S+K+V + F ELGM EAVW++EV +F P + +D GN +Y Sbjct: 130 AALLA-NSVKRVDNVYFLDELGMPEAVWELEVNNFGPLIVAMDSHGNSIYE 179 >1F5N-A nrPDB Length = 592 Score = 32.7 bits (73), Expect = 0.46, Method: Composition-based stats. Identities = 21/86 (24%), Positives = 38/86 (44%), Gaps = 3/86 (3%) Query: 19 IEDASAVNADFHFSAIFQPTDPHHHQTEFAKVEGSEKYVEEVEVFGRQALKVNPEALTIL 78 +E+A A SA Q H+ Q KV+ + ++E+ R + + EA+ + Sbjct: 312 MENAVLALAQIENSAAVQKAIAHYEQQMGQKVQLPTESLQELLDLHRDSER---EAIEVF 368 Query: 79 AHRAFSDVHHFFRKDHLEGWRRAIED 104 +F DV H F+K+ + +D Sbjct: 369 IRSSFKDVDHLFQKELAAQLEKKRDD 394 >3ICS-A nrPDB Length = 588 Score = 32.7 bits (73), Expect = 0.47, Method: Composition-based stats. Identities = 15/67 (22%), Positives = 31/67 (46%), Gaps = 4/67 (5%) Query: 373 YLPDIPE-VHLSTTSVKVDLKRPIDKVRQQLSQYPVGTRVMLNGTLIVARDIAHAKIKEM 431 YL D+ E L +K + P+D++R +L + PV + + L + + + + Sbjct: 505 YLIDVREPNELKQGMIKGSINIPLDELRDRLEEVPVDKDIYITCQLGM---RGYVAARML 561 Query: 432 MDNGEPL 438 M+ G + Sbjct: 562 MEKGYKV 568 >3IMN-A nrPDB Length = 378 Score = 31.2 bits (69), Expect = 1.2, Method: Composition-based stats. Identities = 16/78 (20%), Positives = 30/78 (38%), Gaps = 5/78 (6%) Query: 392 KRPIDKVRQQLSQYPVGTRVMLNGTLIVARDIAHAKIKEMMDNGEPLPEYMKTSPIYYAG 451 + + + ++ + V V L T ++ H K+ + G P+ + P+Y AG Sbjct: 156 RTLVQTPQGEVKKLTVDEFVELEKTTFFKKNAGHEKVVRLDKQGNPM-KDKNGKPVYKAG 214 Query: 452 PAK----TPEGYASGSFG 465 GY +FG Sbjct: 215 KLNGWLVEQGGYPPLAFG 232 >3NBJ-A nrPDB Length = 692 Score = 30.8 bits (68), Expect = 1.6, Method: Composition-based stats. Identities = 19/83 (22%), Positives = 28/83 (33%), Gaps = 10/83 (12%) Query: 378 PEVHLSTTSVKVDLKRPIDKVRQQLSQYPVGTRVMLNGTLIVARDIAHAKIKEMMDNGEP 437 P LST +K + Y G ++ N + R+ A + + G P Sbjct: 24 PLDPLSTAEIKAATNT--------VKSYFAGKKISFN--TVTLREPARKAYIQWKEQGGP 73 Query: 438 LPEYMKTSPIYYAGPAKTPEGYA 460 LP + I AG EG Sbjct: 74 LPPRLAYYVILEAGKPGVKEGLV 96 >2MYF-A nrPDB Length = 89 Score = 29.2 bits (64), Expect = 4.5, Method: Composition-based stats. Identities = 9/43 (20%), Positives = 19/43 (44%) Query: 147 ELCWTGGEDEKYLSKGIWNAYRYHNLRYSQTAALDMFKECNTG 189 ++ + GG DE K +++ + + L+M + N G Sbjct: 11 DILFVGGIDETIDEKSLYDIFSSFGDIRNIEVPLNMTTKKNRG 53 >6F4U-A nrPDB Length = 341 Score = 29.2 bits (64), Expect = 4.5, Method: Composition-based stats. Identities = 17/83 (20%), Positives = 33/83 (39%) Query: 322 FAHQARVIRLPRHGASCPVGLAVSCSADRQILAHINKSGIYIEQLEQNPAQYLPDIPEVH 381 F H + LP HG VG A+ S + + LA + + + + + + + Sbjct: 75 FQHLLHTLNLPGHGLETRVGSALFLSHNLKFLAKFLNDTMAVYEAKLFHTNFYDTVGTIQ 134 Query: 382 LSTTSVKVDLKRPIDKVRQQLSQ 404 L VK + + I + +L + Sbjct: 135 LINDHVKKETRGKIVDLVSELKK 157 >6F02-A nrPDB Length = 389 Score = 29.2 bits (64), Expect = 4.5, Method: Composition-based stats. Identities = 17/83 (20%), Positives = 33/83 (39%) Query: 322 FAHQARVIRLPRHGASCPVGLAVSCSADRQILAHINKSGIYIEQLEQNPAQYLPDIPEVH 381 F H + LP HG VG A+ S + + LA + + + + + + + Sbjct: 77 FQHLLHTLNLPGHGLETRVGSALFLSHNLKFLAKFLNDTMAVYEAKLFHTNFYDTVGTIQ 136 Query: 382 LSTTSVKVDLKRPIDKVRQQLSQ 404 L VK + + I + +L + Sbjct: 137 LINDHVKKETRGKIVDLVSELKK 159 >1L9U-H nrPDB Length = 332 Score = 29.2 bits (64), Expect = 4.7, Method: Composition-based stats. Identities = 26/118 (22%), Positives = 51/118 (43%), Gaps = 8/118 (6%) Query: 372 QYLPDIPEVHLSTTSVKVDLKRPIDKVRQQLSQYPVGTRV--MLNGTLIVARDIAHAKIK 429 QYL +I +V L T ++DL R +++ + + + T + L ++ A+ + A+++ Sbjct: 7 QYLHEIGQVPLLTLEEEIDLARKVEEGMEAIKKLSEATGLDQELIREVVRAKILGTARVE 66 Query: 430 EMMDNGEPLPEYMKT--SPIYYAGPAKTP----EGYASGSFGPTTAGRMDSYVDLFQS 481 E+ + LP+ +K A+ S GR S++DL Q Sbjct: 67 EVDGKLKSLPKELKRYLHIAREGEAARQHLIEANLRLVVSIAKKYTGRGLSFLDLIQE 124 Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta Posted date: Jan 3, 2023 9:05 PM Number of letters in database: 10,336,785 Number of sequences in database: 36,641 Lambda K H 0.313 0.137 0.385 Lambda K H 0.267 0.0416 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 23,720,765 Number of Sequences: 36641 Number of extensions: 1001233 Number of successful extensions: 2703 Number of sequences better than 10.0: 12 Number of HSP's better than 10.0 without gapping: 14 Number of HSP's successfully gapped in prelim test: 15 Number of HSP's that attempted gapping in prelim test: 2671 Number of HSP's gapped (non-prelim): 29 length of query: 568 length of database: 10,336,785 effective HSP length: 102 effective length of query: 466 effective length of database: 6,599,403 effective search space: 3075321798 effective search space used: 3075321798 T: 11 A: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.4 bits) S2: 62 (28.5 bits)