BLASTP 2.2.23 [Feb-03-2010] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= A5F384 (276 letters) Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta 36,641 sequences; 10,336,785 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value 3GBG-A nrPDB 551 e-157 3MKL-A nrPDB 57 6e-09 4FE4-A nrPDB 37 0.008 2K9S-A nrPDB 34 0.082 3OIO-A nrPDB 31 0.72 3OOU-A nrPDB 30 0.85 3LSG-A nrPDB 30 0.86 2HJ0-A nrPDB 28 4.6 3IIK-A nrPDB 28 4.9 5JZV-A nrPDB 27 8.3 >3GBG-A nrPDB Length = 276 Score = 551 bits (1420), Expect = e-157, Method: Compositional matrix adjust. Identities = 276/276 (100%), Positives = 276/276 (100%) Query: 1 MIGKKSFQTNVYRMSKFDTYIFNNLYINDYKMFWIDSGIAKLIDKNCLVSYEINSSSIIL 60 MIGKKSFQTNVYRMSKFDTYIFNNLYINDYKMFWIDSGIAKLIDKNCLVSYEINSSSIIL Sbjct: 1 MIGKKSFQTNVYRMSKFDTYIFNNLYINDYKMFWIDSGIAKLIDKNCLVSYEINSSSIIL 60 Query: 61 LKKNSIQRFSLTSLSDENINVSVITISDSFIRSLKSYILGDLMIRNLYSENKDLLLWNCE 120 LKKNSIQRFSLTSLSDENINVSVITISDSFIRSLKSYILGDLMIRNLYSENKDLLLWNCE Sbjct: 61 LKKNSIQRFSLTSLSDENINVSVITISDSFIRSLKSYILGDLMIRNLYSENKDLLLWNCE 120 Query: 121 HNDIAVLSEVVNGFREINYSDEFLKVFFSGFFSKVEKKYNSIFITDDLDAMEKISCLVKS 180 HNDIAVLSEVVNGFREINYSDEFLKVFFSGFFSKVEKKYNSIFITDDLDAMEKISCLVKS Sbjct: 121 HNDIAVLSEVVNGFREINYSDEFLKVFFSGFFSKVEKKYNSIFITDDLDAMEKISCLVKS 180 Query: 181 DITRNWRWADICGELRTNRMILKKELESRGVKFRELINSIRISYSISLMKTGEFKIKQIA 240 DITRNWRWADICGELRTNRMILKKELESRGVKFRELINSIRISYSISLMKTGEFKIKQIA Sbjct: 181 DITRNWRWADICGELRTNRMILKKELESRGVKFRELINSIRISYSISLMKTGEFKIKQIA 240 Query: 241 YQSGFASVSYFSTVFKSTMNVAPSEYLFMLTGVAEK 276 YQSGFASVSYFSTVFKSTMNVAPSEYLFMLTGVAEK Sbjct: 241 YQSGFASVSYFSTVFKSTMNVAPSEYLFMLTGVAEK 276 >3MKL-A nrPDB Length = 120 Score = 57.4 bits (137), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 28/94 (29%), Positives = 51/94 (54%) Query: 173 KISCLVKSDITRNWRWADICGELRTNRMILKKELESRGVKFRELINSIRISYSISLMKTG 232 ++ ++ ++I W A I EL + +LKK+L + +L+ R+ ++ L+ Sbjct: 11 RVCTVINNNIAHEWTLARIASELLMSPSLLKKKLREEETSYSQLLTECRMQRALQLIVIH 70 Query: 233 EFKIKQIAYQSGFASVSYFSTVFKSTMNVAPSEY 266 F IK++A G+ SVSYF VF++ + P+EY Sbjct: 71 GFSIKRVAVSCGYHSVSYFIYVFRNYYGMTPTEY 104 >4FE4-A nrPDB Length = 392 Score = 37.0 bits (84), Expect = 0.008, Method: Compositional matrix adjust. Identities = 22/77 (28%), Positives = 39/77 (50%), Gaps = 2/77 (2%) Query: 190 DICGELRTNRMILKKELESRGVKFRELINSIRISYSISLMKTGEFKIKQIAYQSGFASVS 249 D G R+N + K+ E G +I++ ++ + SL+ + I +I+ G+ S+ Sbjct: 309 DAVGISRSN--LEKRFKEEVGETIHAMIHAEKLEKARSLLISTTLSINEISQMCGYPSLQ 366 Query: 250 YFSTVFKSTMNVAPSEY 266 YF +VFK + P EY Sbjct: 367 YFYSVFKKAYDTTPKEY 383 >2K9S-A nrPDB Length = 107 Score = 33.9 bits (76), Expect = 0.082, Method: Compositional matrix adjust. Identities = 17/46 (36%), Positives = 22/46 (47%) Query: 221 RISYSISLMKTGEFKIKQIAYQSGFASVSYFSTVFKSTMNVAPSEY 266 RIS + L+ T I + GF YFS VFK +PSE+ Sbjct: 57 RISQAKLLLSTTRMPIATVGRNVGFDDQLYFSRVFKKCTGASPSEF 102 >3OIO-A nrPDB Length = 113 Score = 30.8 bits (68), Expect = 0.72, Method: Compositional matrix adjust. Identities = 13/46 (28%), Positives = 26/46 (56%) Query: 220 IRISYSISLMKTGEFKIKQIAYQSGFASVSYFSTVFKSTMNVAPSE 265 +R++ + L++ I QI GF+S +FS+ +++ N+ P E Sbjct: 59 LRLNRARQLLQQTSKSIVQIGLACGFSSGPHFSSTYRNHFNITPRE 104 >3OOU-A nrPDB Length = 108 Score = 30.4 bits (67), Expect = 0.85, Method: Compositional matrix adjust. Identities = 17/67 (25%), Positives = 33/67 (49%), Gaps = 3/67 (4%) Query: 200 MILKKELESRGVKFRELINSIRISYSISLMKTGEFKIKQIAYQSGFASVSYFSTVFKSTM 259 + +KE+ G F + +N R++Y+ + + + IA +SG+ ++YF FK Sbjct: 40 QLFQKEM---GEHFTDYLNRYRVNYAKEELLQTKDNLTIIAGKSGYTDMAYFYRQFKKHT 96 Query: 260 NVAPSEY 266 P+ Y Sbjct: 97 GETPNRY 103 >3LSG-A nrPDB Length = 103 Score = 30.4 bits (67), Expect = 0.86, Method: Compositional matrix adjust. Identities = 13/29 (44%), Positives = 17/29 (58%) Query: 238 QIAYQSGFASVSYFSTVFKSTMNVAPSEY 266 +IA Q GF V+YF T FK + P +Y Sbjct: 73 EIAEQVGFEDVNYFITKFKKYYQITPKQY 101 >2HJ0-A nrPDB Length = 519 Score = 28.1 bits (61), Expect = 4.6, Method: Compositional matrix adjust. Identities = 20/57 (35%), Positives = 31/57 (54%), Gaps = 6/57 (10%) Query: 43 IDKNCLVSYEINSS--SIILLKKNSIQRFSLTSLS----DENINVSVITISDSFIRS 93 +D+N YEI+++ + L K + I + + LS D N NV+V+T SD IR Sbjct: 339 LDRNAEKHYEIDANMYASPLSKGSVINQLDICVLSALEVDTNFNVNVMTGSDGVIRG 395 >3IIK-A nrPDB Length = 180 Score = 28.1 bits (61), Expect = 4.9, Method: Compositional matrix adjust. Identities = 21/79 (26%), Positives = 36/79 (45%), Gaps = 14/79 (17%) Query: 187 RWADICGELRTNRMILKKELESRGVKFRELINSIRISYSISLMKTGEFKIKQIAYQSGFA 246 RW I LRT+ +L + LE+RG ++L ++I+ +I Q+ Y+ A Sbjct: 95 RWFHIVFVLRTDTNVLYERLETRGYNEKKLTDNIQC------------EIFQVLYEE--A 140 Query: 247 SVSYFSTVFKSTMNVAPSE 265 + SY + + P E Sbjct: 141 TASYKEEIVHQLPSNKPEE 159 >5JZV-A nrPDB Length = 206 Score = 27.3 bits (59), Expect = 8.3, Method: Compositional matrix adjust. Identities = 21/79 (26%), Positives = 36/79 (45%), Gaps = 14/79 (17%) Query: 187 RWADICGELRTNRMILKKELESRGVKFRELINSIRISYSISLMKTGEFKIKQIAYQSGFA 246 RW I LRT+ +L + LE+RG ++L ++I+ +I Q+ Y+ A Sbjct: 121 RWFHIVFVLRTDTNVLYERLETRGYNEKKLTDNIQC------------EIFQVLYEE--A 166 Query: 247 SVSYFSTVFKSTMNVAPSE 265 + SY + + P E Sbjct: 167 TASYKEEIVHQLPSNKPEE 185 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: 3GBG-A nrPDB 474 e-134 3MKL-A nrPDB 158 2e-39 Sequences not found previously or not previously below threshold: 4FE4-A nrPDB 50 1e-06 5CHH-A nrPDB 49 2e-06 3OIO-A nrPDB 46 2e-05 3LSG-A nrPDB 38 0.006 2K9S-A nrPDB 37 0.007 3OOU-A nrPDB 34 0.083 3MN2-A nrPDB 33 0.17 2V5P-A nrPDB 29 2.5 2V5O-A nrPDB 29 2.5 1BL0-A nrPDB 28 3.0 2HJ0-A nrPDB 28 4.5 1UHG-A nrPDB 28 5.4 5NLA-A nrPDB 27 6.8 2OOE-A nrPDB 27 7.3 2OND-A nrPDB 27 8.1 >3GBG-A nrPDB Length = 276 Score = 474 bits (1219), Expect = e-134, Method: Composition-based stats. Identities = 276/276 (100%), Positives = 276/276 (100%) Query: 1 MIGKKSFQTNVYRMSKFDTYIFNNLYINDYKMFWIDSGIAKLIDKNCLVSYEINSSSIIL 60 MIGKKSFQTNVYRMSKFDTYIFNNLYINDYKMFWIDSGIAKLIDKNCLVSYEINSSSIIL Sbjct: 1 MIGKKSFQTNVYRMSKFDTYIFNNLYINDYKMFWIDSGIAKLIDKNCLVSYEINSSSIIL 60 Query: 61 LKKNSIQRFSLTSLSDENINVSVITISDSFIRSLKSYILGDLMIRNLYSENKDLLLWNCE 120 LKKNSIQRFSLTSLSDENINVSVITISDSFIRSLKSYILGDLMIRNLYSENKDLLLWNCE Sbjct: 61 LKKNSIQRFSLTSLSDENINVSVITISDSFIRSLKSYILGDLMIRNLYSENKDLLLWNCE 120 Query: 121 HNDIAVLSEVVNGFREINYSDEFLKVFFSGFFSKVEKKYNSIFITDDLDAMEKISCLVKS 180 HNDIAVLSEVVNGFREINYSDEFLKVFFSGFFSKVEKKYNSIFITDDLDAMEKISCLVKS Sbjct: 121 HNDIAVLSEVVNGFREINYSDEFLKVFFSGFFSKVEKKYNSIFITDDLDAMEKISCLVKS 180 Query: 181 DITRNWRWADICGELRTNRMILKKELESRGVKFRELINSIRISYSISLMKTGEFKIKQIA 240 DITRNWRWADICGELRTNRMILKKELESRGVKFRELINSIRISYSISLMKTGEFKIKQIA Sbjct: 181 DITRNWRWADICGELRTNRMILKKELESRGVKFRELINSIRISYSISLMKTGEFKIKQIA 240 Query: 241 YQSGFASVSYFSTVFKSTMNVAPSEYLFMLTGVAEK 276 YQSGFASVSYFSTVFKSTMNVAPSEYLFMLTGVAEK Sbjct: 241 YQSGFASVSYFSTVFKSTMNVAPSEYLFMLTGVAEK 276 >3MKL-A nrPDB Length = 120 Score = 158 bits (400), Expect = 2e-39, Method: Composition-based stats. Identities = 28/94 (29%), Positives = 51/94 (54%) Query: 173 KISCLVKSDITRNWRWADICGELRTNRMILKKELESRGVKFRELINSIRISYSISLMKTG 232 ++ ++ ++I W A I EL + +LKK+L + +L+ R+ ++ L+ Sbjct: 11 RVCTVINNNIAHEWTLARIASELLMSPSLLKKKLREEETSYSQLLTECRMQRALQLIVIH 70 Query: 233 EFKIKQIAYQSGFASVSYFSTVFKSTMNVAPSEY 266 F IK++A G+ SVSYF VF++ + P+EY Sbjct: 71 GFSIKRVAVSCGYHSVSYFIYVFRNYYGMTPTEY 104 >4FE4-A nrPDB Length = 392 Score = 49.6 bits (117), Expect = 1e-06, Method: Composition-based stats. Identities = 19/90 (21%), Positives = 43/90 (47%), Gaps = 1/90 (1%) Query: 178 VKSDITRNWRWADICGELRTNRMILKKELESR-GVKFRELINSIRISYSISLMKTGEFKI 236 +++ + + + + +R L+K + G +I++ ++ + SL+ + I Sbjct: 294 IRNHACKGIKVDQVLDAVGISRSNLEKRFKEEVGETIHAMIHAEKLEKARSLLISTTLSI 353 Query: 237 KQIAYQSGFASVSYFSTVFKSTMNVAPSEY 266 +I+ G+ S+ YF +VFK + P EY Sbjct: 354 NEISQMCGYPSLQYFYSVFKKAYDTTPKEY 383 >5CHH-A nrPDB Length = 341 Score = 49.3 bits (116), Expect = 2e-06, Method: Composition-based stats. Identities = 19/95 (20%), Positives = 45/95 (47%) Query: 172 EKISCLVKSDITRNWRWADICGELRTNRMILKKELESRGVKFRELINSIRISYSISLMKT 231 ++I L++ R A + +L+ L++ L G +RE+++ +R + L++ Sbjct: 231 QRIVALLEVLQDRYPSIAWVARQLKVTERTLRRRLADEGTNYREVLDLVRHDRARQLLRD 290 Query: 232 GEFKIKQIAYQSGFASVSYFSTVFKSTMNVAPSEY 266 +I+++A + G+ S F F+ ++Y Sbjct: 291 ERLRIEEVAERLGYMDTSSFRHAFRRWTGQCANDY 325 >3OIO-A nrPDB Length = 113 Score = 45.8 bits (107), Expect = 2e-05, Method: Composition-based stats. Identities = 20/91 (21%), Positives = 43/91 (47%), Gaps = 1/91 (1%) Query: 176 CLVKSDITRNWRWADICGELRTNRMILKKELESR-GVKFRELINSIRISYSISLMKTGEF 234 L++++I DI + +R L++ + G + +R++ + L++ Sbjct: 14 SLMEANIEEPLSTDDIAYYVGVSRRQLERLFKQYLGTVPSKYYLELRLNRARQLLQQTSK 73 Query: 235 KIKQIAYQSGFASVSYFSTVFKSTMNVAPSE 265 I QI GF+S +FS+ +++ N+ P E Sbjct: 74 SIVQIGLACGFSSGPHFSSTYRNHFNITPRE 104 >3LSG-A nrPDB Length = 103 Score = 37.7 bits (86), Expect = 0.006, Method: Composition-based stats. Identities = 20/57 (35%), Positives = 31/57 (54%) Query: 210 GVKFRELINSIRISYSISLMKTGEFKIKQIAYQSGFASVSYFSTVFKSTMNVAPSEY 266 G+ F++ + R+ + L+ T E K +IA Q GF V+YF T FK + P +Y Sbjct: 45 GIPFQDYLLQKRMEKAKLLLLTTELKNYEIAEQVGFEDVNYFITKFKKYYQITPKQY 101 >2K9S-A nrPDB Length = 107 Score = 37.3 bits (85), Expect = 0.007, Method: Composition-based stats. Identities = 21/98 (21%), Positives = 36/98 (36%), Gaps = 2/98 (2%) Query: 171 MEKISCLVKSDIT-RNWRWADICGELRTNRMILKKELESR-GVKFRELINSIRISYSISL 228 + + + + N+ A + + + L + G+ RIS + L Sbjct: 5 VREACQYISDHLADSNFDIASVAQHVCLSPSRLSHLFRQQLGISVLSWREDQRISQAKLL 64 Query: 229 MKTGEFKIKQIAYQSGFASVSYFSTVFKSTMNVAPSEY 266 + T I + GF YFS VFK +PSE+ Sbjct: 65 LSTTRMPIATVGRNVGFDDQLYFSRVFKKCTGASPSEF 102 >3OOU-A nrPDB Length = 108 Score = 33.8 bits (76), Expect = 0.083, Method: Composition-based stats. Identities = 17/97 (17%), Positives = 40/97 (41%), Gaps = 1/97 (1%) Query: 171 MEKISCLVKSDITRNWRWADICGELRTNRMILKKELESR-GVKFRELINSIRISYSISLM 229 ++ + + + + + N + L + + G F + +N R++Y+ + Sbjct: 7 IQNVLSYITEHFSEGMSLKTLGNDFHINAVYLGQLFQKEMGEHFTDYLNRYRVNYAKEEL 66 Query: 230 KTGEFKIKQIAYQSGFASVSYFSTVFKSTMNVAPSEY 266 + + IA +SG+ ++YF FK P+ Y Sbjct: 67 LQTKDNLTIIAGKSGYTDMAYFYRQFKKHTGETPNRY 103 >3MN2-A nrPDB Length = 108 Score = 32.7 bits (73), Expect = 0.17, Method: Composition-based stats. Identities = 17/74 (22%), Positives = 32/74 (43%), Gaps = 2/74 (2%) Query: 196 RTNRMILKKELESRGVKFRELINSIRISYSISLMKTGEFKIKQIA--YQSGFASVSYFST 253 ++R I K SRG +R+ ++ +L+ G A GF+++ +F+ Sbjct: 30 ISSRGIFKAFQRSRGYSPMAFAKRVRLQHAHNLLSDGATPTTVTAAALSCGFSNLGHFAR 89 Query: 254 VFKSTMNVAPSEYL 267 ++ PSE L Sbjct: 90 DYRDMFGEKPSETL 103 >2V5P-A nrPDB Length = 492 Score = 28.8 bits (63), Expect = 2.5, Method: Composition-based stats. Identities = 24/101 (23%), Positives = 39/101 (38%), Gaps = 5/101 (4%) Query: 121 HNDIAVLSEVVNGFREINYSDEFLKVFFSGFFSKVEKKYNSIFITDDLDAMEKISCLVKS 180 H D AV+ VNG R +D+ + F F+ K Y I + A S Sbjct: 371 HQDEAVVLSYVNGDRCPPETDDGVPCVFPFIFNG--KSYEECII--ESRAKLWCSTTADY 426 Query: 181 DITRNWRWADICGELRTNRMILKKELESRGVKFRELINSIR 221 D W + RT+ +I K + E + ++ + +R Sbjct: 427 DRDHEWGFCRHSNSYRTSSIIFKCD-EDEDIGRPQVFSEVR 466 >2V5O-A nrPDB Length = 627 Score = 28.8 bits (63), Expect = 2.5, Method: Composition-based stats. Identities = 24/101 (23%), Positives = 39/101 (38%), Gaps = 5/101 (4%) Query: 121 HNDIAVLSEVVNGFREINYSDEFLKVFFSGFFSKVEKKYNSIFITDDLDAMEKISCLVKS 180 H D AV+ VNG R +D+ + F F+ K Y I + A S Sbjct: 371 HQDEAVVLSYVNGDRCPPETDDGVPCVFPFIFNG--KSYEECII--ESRAKLWCSTTADY 426 Query: 181 DITRNWRWADICGELRTNRMILKKELESRGVKFRELINSIR 221 D W + RT+ +I K + E + ++ + +R Sbjct: 427 DRDHEWGFCRHSNSYRTSSIIFKCD-EDEDIGRPQVFSEVR 466 >1BL0-A nrPDB Length = 129 Score = 28.5 bits (62), Expect = 3.0, Method: Composition-based stats. Identities = 14/60 (23%), Positives = 26/60 (43%) Query: 207 ESRGVKFRELINSIRISYSISLMKTGEFKIKQIAYQSGFASVSYFSTVFKSTMNVAPSEY 266 + G + I S +++ +K I +A + GF S + FK+ +V P +Y Sbjct: 50 KETGHSLGQYIRSRKMTEIAQKLKESNEPILYLAERYGFESQQTLTRTFKNYFDVPPHKY 109 >2HJ0-A nrPDB Length = 519 Score = 28.1 bits (61), Expect = 4.5, Method: Composition-based stats. Identities = 20/56 (35%), Positives = 31/56 (55%), Gaps = 6/56 (10%) Query: 43 IDKNCLVSYEINSS--SIILLKKNSIQRFSLTSLS----DENINVSVITISDSFIR 92 +D+N YEI+++ + L K + I + + LS D N NV+V+T SD IR Sbjct: 339 LDRNAEKHYEIDANMYASPLSKGSVINQLDICVLSALEVDTNFNVNVMTGSDGVIR 394 >1UHG-A nrPDB Length = 385 Score = 27.7 bits (60), Expect = 5.4, Method: Composition-based stats. Identities = 13/80 (16%), Positives = 37/80 (46%), Gaps = 10/80 (12%) Query: 134 FREINYSDEFLKV----FFSGFFSKVEKKYNSIFITDDLDAMEKISCLVKSDITRNWRWA 189 FR + + E +K+ F SG S + + + D++ +E++ ++ + W + Sbjct: 217 FRVASMASEKMKILELPFASGTMSML------VLLPDEVSGLEQLESIINFEKLTEWTSS 270 Query: 190 DICGELRTNRMILKKELESR 209 ++ E + + + ++E + Sbjct: 271 NVMEERKIKVYLPRMKMEEK 290 >5NLA-A nrPDB Length = 382 Score = 27.3 bits (59), Expect = 6.8, Method: Composition-based stats. Identities = 23/104 (22%), Positives = 40/104 (38%), Gaps = 10/104 (9%) Query: 168 LDAMEKISCLVKSDI-TRNWRWADICGELRTNRMILKKELESRGVKFRELINSIRISYSI 226 + ME+ + ++ + + IC EL +R L + E G ++N IR + Sbjct: 249 MGVMERAHRYIHLNLNSGDLTPETICRELGISRTRLYQLFEPSG----GVLNYIRRRRLL 304 Query: 227 SLMK-----TGEFKIKQIAYQSGFASVSYFSTVFKSTMNVAPSE 265 T I +IA +GF + F+ F +P E Sbjct: 305 QAYAELSDPTNNRPIGEIAEAAGFDLAANFTRAFSHEFGASPRE 348 >2OOE-A nrPDB Length = 530 Score = 27.3 bits (59), Expect = 7.3, Method: Composition-based stats. Identities = 21/109 (19%), Positives = 45/109 (41%), Gaps = 9/109 (8%) Query: 152 FSKVEKKYNSIFITDDLDAMEKISCLVKSDITRNWRWADICGELRTNRMILKKELESRGV 211 + KV YN + +D+D LV + ++A +++ RMI KK E Sbjct: 337 YEKVHSIYNRLLAIEDIDP-----TLV---YIQYMKFARRAEGIKSGRMIFKKAREDART 388 Query: 212 KFRELINSIRISYSISLMKTGEFKIKQIAYQSGFASVSYFSTVFKSTMN 260 + + + + Y S K+ FKI ++ + + + + + ++ Sbjct: 389 RHHVYVTAALMEYYCSKDKSVAFKIFELGLKK-YGDIPEYVLAYIDYLS 436 >2OND-A nrPDB Length = 308 Score = 27.3 bits (59), Expect = 8.1, Method: Composition-based stats. Identities = 21/109 (19%), Positives = 45/109 (41%), Gaps = 9/109 (8%) Query: 152 FSKVEKKYNSIFITDDLDAMEKISCLVKSDITRNWRWADICGELRTNRMILKKELESRGV 211 + KV YN + +D+D LV + ++A +++ RMI KK E Sbjct: 115 YEKVHSIYNRLLAIEDIDP-----TLV---YIQYMKFARRAEGIKSGRMIFKKAREDART 166 Query: 212 KFRELINSIRISYSISLMKTGEFKIKQIAYQSGFASVSYFSTVFKSTMN 260 + + + + Y S K+ FKI ++ + + + + + ++ Sbjct: 167 RHHVYVTAALMEYYCSKDKSVAFKIFELGLKK-YGDIPEYVLAYIDYLS 214 Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta Posted date: Jan 3, 2023 9:05 PM Number of letters in database: 10,336,785 Number of sequences in database: 36,641 Lambda K H 0.322 0.138 0.382 Lambda K H 0.267 0.0443 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 11,210,661 Number of Sequences: 36641 Number of extensions: 476003 Number of successful extensions: 1403 Number of sequences better than 10.0: 34 Number of HSP's better than 10.0 without gapping: 24 Number of HSP's successfully gapped in prelim test: 28 Number of HSP's that attempted gapping in prelim test: 1375 Number of HSP's gapped (non-prelim): 57 length of query: 276 length of database: 10,336,785 effective HSP length: 96 effective length of query: 180 effective length of database: 6,819,249 effective search space: 1227464820 effective search space used: 1227464820 T: 11 A: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.9 bits) S2: 59 (27.2 bits)