BLASTP 2.2.23 [Feb-03-2010] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= A2QSY5 (281 letters) Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta 36,641 sequences; 10,336,785 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value 1UWC-A nrPDB 544 e-155 1DT3-A nrPDB 123 8e-29 4TGL-A nrPDB 119 1e-27 6QPR-A nrPDB 119 2e-27 5CH8-A nrPDB 108 3e-24 1LGY-A nrPDB 100 6e-22 3NGM-A nrPDB 98 5e-21 3O0D-A nrPDB 95 4e-20 5XK2-A nrPDB 87 6e-18 3G7N-A nrPDB 82 3e-16 5GW8-A nrPDB 57 6e-09 4ZRE-A nrPDB 55 5e-08 2YIJ-A nrPDB 49 3e-06 2Z84-A nrPDB 36 0.019 3JWE-A nrPDB 33 0.16 2ORY-A nrPDB 30 1.4 5I7I-A nrPDB 28 4.3 5G56-A nrPDB 28 4.5 5DT6-A nrPDB 28 4.8 5LA1-A nrPDB 28 5.0 1FCP-A nrPDB 27 9.0 >1UWC-A nrPDB Length = 261 Score = 544 bits (1402), Expect = e-155, Method: Compositional matrix adjust. Identities = 260/260 (100%), Positives = 260/260 (100%) Query: 22 ASTQGISEDLYNRLVEMATISQAAYADLCNIPSTIIKGEKIYNAQTDINGWILRDDTSKE 81 ASTQGISEDLYNRLVEMATISQAAYADLCNIPSTIIKGEKIYNAQTDINGWILRDDTSKE Sbjct: 1 ASTQGISEDLYNRLVEMATISQAAYADLCNIPSTIIKGEKIYNAQTDINGWILRDDTSKE 60 Query: 82 IITVFRGTGSDTNLQLDTNYTLTPFDTLPQCNDCEVHGGYYIGWISVQDQVESLVKQQAS 141 IITVFRGTGSDTNLQLDTNYTLTPFDTLPQCNDCEVHGGYYIGWISVQDQVESLVKQQAS Sbjct: 61 IITVFRGTGSDTNLQLDTNYTLTPFDTLPQCNDCEVHGGYYIGWISVQDQVESLVKQQAS 120 Query: 142 QYPDYALTVTGHSLGASMAALTAAQLSATYDNVRLYTFGEPRSGNQAFASYMNDAFQVSS 201 QYPDYALTVTGHSLGASMAALTAAQLSATYDNVRLYTFGEPRSGNQAFASYMNDAFQVSS Sbjct: 121 QYPDYALTVTGHSLGASMAALTAAQLSATYDNVRLYTFGEPRSGNQAFASYMNDAFQVSS 180 Query: 202 PETTQYFRVTHSNDGIPNLPPAEQGYAHGGVEYWSVDPYSAQNTFVCTGDEVQCCEAQGG 261 PETTQYFRVTHSNDGIPNLPPAEQGYAHGGVEYWSVDPYSAQNTFVCTGDEVQCCEAQGG Sbjct: 181 PETTQYFRVTHSNDGIPNLPPAEQGYAHGGVEYWSVDPYSAQNTFVCTGDEVQCCEAQGG 240 Query: 262 QGVNDAHTTYFGMTSGACTW 281 QGVNDAHTTYFGMTSGACTW Sbjct: 241 QGVNDAHTTYFGMTSGACTW 260 >1DT3-A nrPDB Length = 269 Score = 123 bits (309), Expect = 8e-29, Method: Compositional matrix adjust. Identities = 86/281 (30%), Positives = 140/281 (49%), Gaps = 42/281 (14%) Query: 27 ISEDLYNRLVEMATISQAAYADL-------CNIPST------IIKGEKIY------NAQT 67 +S+DL+N+ A S AAY NI T + K + + + Sbjct: 2 VSQDLFNQFNLFAQYSAAAYCGKNNDAPAGTNITCTGNACPEVEKADATFLYSFEDSGVG 61 Query: 68 DINGWILRDDTSKEIITVFRGTGSDTNLQLDTNYTLTPFDTLPQCNDCEVHGGYYIGWIS 127 D+ G++ D+T+K I+ FRG+ S N + N+ L + + C+ C H G+ W S Sbjct: 62 DVTGFLALDNTNKLIVLSFRGSRSIENWIGNLNFDLKEINDI--CSGCRGHDGFTSSWRS 119 Query: 128 VQDQVESLVKQQASQYPDYALTVTGHSLGASMAALTAAQLSATYDNVRLYTFGEPRSGNQ 187 V D + V+ ++PDY + TGHSLG ++A + A L ++ ++++G PR GN+ Sbjct: 120 VADTLRQKVEDAVREHPDYRVVFTGHSLGGALATVAGADLRGNGYDIDVFSYGAPRVGNR 179 Query: 188 AFASYMNDAFQVSSPETTQYFRVTHSNDGIPNLPPAEQGYAHGGVEYW----SVDPYSAQ 243 AFA ++ V + T +R+TH+ND +P LPP E GY+H EYW ++ P + + Sbjct: 180 AFAEFL----TVQTGGT--LYRITHTNDIVPRLPPREFGYSHSSPEYWIKSGTLVPVT-R 232 Query: 244 NTFVCTGDEVQCCEAQGGQGVND-----AHTTYFGMTSGAC 279 N V +++ +A GG + AH YFG+ G C Sbjct: 233 NDIV----KIEGIDATGGNNQPNIPDIPAHLWYFGLI-GTC 268 >4TGL-A nrPDB Length = 269 Score = 119 bits (299), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 82/221 (37%), Positives = 111/221 (50%), Gaps = 20/221 (9%) Query: 68 DINGWILRDDTSKEIITVFRGTGSDTNLQLDTNYTLTPFDTLPQCNDCEVHGGYYIGWIS 127 D N + R D+ K I VFRG+ S N D + + P + +VH G+ + Sbjct: 61 DTNAMVARGDSEKTIYIVFRGSSSIRNWIADLTFVPVSY---PPVSGTKVHKGFLDSYGE 117 Query: 128 VQDQVESLVKQQASQYPDYALTVTGHSLGASMAALTAAQL-----SATYDNVRLYTFGEP 182 VQ+++ + V Q QYP Y + VTGHSLG + A L A L + N+ LYT G+P Sbjct: 118 VQNELVATVLDQFKQYPSYKVAVTGHSLGGATALLCALDLYQREEGLSSSNLFLYTQGQP 177 Query: 183 RSGNQAFASYMNDAFQVSSPETTQYFRVTHSNDGIPNLPPAEQGYAHGGVEYWSVDPYSA 242 R GN AFA+Y+ VS+ Y R + D +P+LPPA G+ H G EYW D S Sbjct: 178 RVGNPAFANYV-----VST--GIPYRRTVNERDIVPHLPPAAFGFLHAGSEYWITDN-SP 229 Query: 243 QNTFVCTGD-EVQCCEAQ--GGQGVNDAHTTYFGMTSGACT 280 + VCT D E C V D H +YFG+ +G CT Sbjct: 230 ETVQVCTSDLETSDCSNSIVPFTSVLD-HLSYFGINTGLCT 269 >6QPR-A nrPDB Length = 361 Score = 119 bits (297), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 81/221 (36%), Positives = 111/221 (50%), Gaps = 20/221 (9%) Query: 68 DINGWILRDDTSKEIITVFRGTGSDTNLQLDTNYTLTPFDTLPQCNDCEVHGGYYIGWIS 127 D N + R D+ K I VFRG+ S N D + + P + +VH G+ + Sbjct: 153 DTNAMVARGDSEKTIYIVFRGSSSIRNWIADLTFVPVSY---PPVSGTKVHKGFLDSYGE 209 Query: 128 VQDQVESLVKQQASQYPDYALTVTGHSLGASMAALTAAQL-----SATYDNVRLYTFGEP 182 VQ+++ + V Q QYP Y + VTGHSLG + A L A L + N+ LYT G+P Sbjct: 210 VQNELVATVLDQFKQYPSYKVAVTGHSLGGATALLCALDLYQREEGLSSSNLFLYTQGQP 269 Query: 183 RSGNQAFASYMNDAFQVSSPETTQYFRVTHSNDGIPNLPPAEQGYAHGGVEYWSVDPYSA 242 R G+ AFA+Y+ VS+ Y R + D +P+LPPA G+ H G EYW D S Sbjct: 270 RVGDPAFANYV-----VST--GIPYRRTVNERDIVPHLPPAAFGFLHAGEEYWITD-NSP 321 Query: 243 QNTFVCTGD-EVQCCEAQ--GGQGVNDAHTTYFGMTSGACT 280 + VCT D E C V D H +YFG+ +G CT Sbjct: 322 ETVQVCTSDLETSDCSNSIVPFTSVLD-HLSYFGINTGLCT 361 >5CH8-A nrPDB Length = 279 Score = 108 bits (269), Expect = 3e-24, Method: Compositional matrix adjust. Identities = 62/177 (35%), Positives = 85/177 (48%), Gaps = 12/177 (6%) Query: 67 TDINGWILRDDTSKEIITVFRGTGSDTNLQLDTNYTLTPFDTLPQCNDCEVHGGYYIGWI 126 TD G+I D T+ ++ FRG+ S N D + T C+ C G++ W Sbjct: 61 TDTAGYIAVDHTNSAVVLAFRGSYSVRNWVADATFVHT---NPGLCDGCLAELGFWSSWK 117 Query: 127 SVQDQVESLVKQQASQYPDYALTVTGHSLGASMAALTAAQLSAT-YDNVRLYTFGEPRSG 185 V+D + +K+ +Q P+Y L V GHSLGA++A L A L Y + +LY + PR G Sbjct: 118 LVRDDIIKELKEVVAQNPNYELVVVGHSLGAAVATLAATDLRGKGYPSAKLYAYASPRVG 177 Query: 186 NQAFASYMNDAFQVSSPETTQYFRVTHSNDGIPNLPPAEQGYAHGGVEYWSVDPYSA 242 N A A Y+ FR TH+ND +P LP GY H EYW P A Sbjct: 178 NAALAKYIT--------AQGNNFRFTHTNDPVPKLPLLSMGYVHVSPEYWITSPNQA 226 >1LGY-A nrPDB Length = 269 Score = 100 bits (250), Expect = 6e-22, Method: Compositional matrix adjust. Identities = 66/221 (29%), Positives = 102/221 (46%), Gaps = 21/221 (9%) Query: 67 TDINGWILRDDTSKEIITVFRGTGSDTNLQLDTNYTLTPFDTLPQCNDCEVHGGYYIGWI 126 +D NG++LR D K I VFRGT S + D + + + + +VH G+ + Sbjct: 61 SDTNGYVLRSDKQKTIYLVFRGTNSFRSAITDIVFNFSDYKPV---KGAKVHAGFLSSYE 117 Query: 127 SVQDQVESLVKQQASQYPDYALTVTGHSLGASMAALTAAQL-----SATYDNVRLYTFGE 181 V + +V++Q + +P Y + VTGHSLG + A L L + N+ ++T G Sbjct: 118 QVVNDYFPVVQEQLTAHPTYKVIVTGHSLGGAQALLAGMDLYQREPRLSPKNLSIFTVGG 177 Query: 182 PRSGNQAFASYMNDAFQVSSPETTQYFRVTHSNDGIPNLPPAEQGYAHGGVEYWSVDPYS 241 PR GN FA Y+ + R H D +P++PP G+ H GVE W Sbjct: 178 PRVGNPTFAYYVEST-------GIPFQRTVHKRDIVPHVPPQSFGFLHPGVESWIKS--G 228 Query: 242 AQNTFVCTGD-EVQCCEAQ--GGQGVNDAHTTYFGMTSGAC 279 N +CT + E + C + D H +YF + G+C Sbjct: 229 TSNVQICTSEIETKDCSNSIVPFTSILD-HLSYFDINEGSC 268 >3NGM-A nrPDB Length = 319 Score = 97.8 bits (242), Expect = 5e-21, Method: Compositional matrix adjust. Identities = 71/233 (30%), Positives = 106/233 (45%), Gaps = 32/233 (13%) Query: 65 AQTDINGWILRDDTSKEIITVFRGTGSD----TNLQLDTNYTLTPFDTLPQCNDCEVHGG 120 ++T I G++ D T KEI+ FRG+ + TNL D D + C VH G Sbjct: 58 SKTGIGGYVATDPTRKEIVVSFRGSINIRNWLTNLDFDQ-------DDCSLTSGCGVHSG 110 Query: 121 YYIGWISVQDQVESLVKQQASQYPDYALTVTGHSLGASMAALTAAQLSATYDNVRLYTFG 180 + W + + V + P + + GHSLG ++A L A L + +YT+G Sbjct: 111 FQNAWNEISAAATAAVAKARKANPSFKVVSVGHSLGGAVATLAGANLRIGGTPLDIYTYG 170 Query: 181 EPRSGNQAFASYMNDAFQVSSPETTQYFRVTHSNDGIPNLPPAEQGYAHGGVEYW----- 235 PR GN A+++++ + FRVT++ D +P LPP GY H EYW Sbjct: 171 SPRVGNTQLAAFVSN-------QAGGEFRVTNAKDPVPRLPPLIFGYRHTSPEYWLSGSG 223 Query: 236 --SVDPYSAQNTFVCTG-DEVQCCEAQGGQGVNDAHTTYFGMT----SGACTW 281 +D Y+ + VC G +QC G + DAH YF T +G +W Sbjct: 224 GDKID-YTINDVKVCEGAANLQCNGGTLGLDI-DAHLHYFQATDACSAGGISW 274 >3O0D-A nrPDB Length = 301 Score = 94.7 bits (234), Expect = 4e-20, Method: Compositional matrix adjust. Identities = 72/235 (30%), Positives = 109/235 (46%), Gaps = 25/235 (10%) Query: 68 DINGWILRDDTSKEIITVFRGTGSDTNLQLDTNYT---LTPFD------TLPQCNDCEVH 118 D++G++ D SK+I V RGT S ++ D LT FD + C+DC VH Sbjct: 67 DVSGYLAVDHASKQIYLVIRGTHSLEDVITDIRIMQAPLTNFDLAANISSTATCDDCLVH 126 Query: 119 GGYYIGWISVQDQVESLVKQQASQYPDYALTVTGHSLGASMAALTAAQLSATYDNVRLYT 178 G+ + + +Q+ + QYPDY + VTGHSLG + A L L + + T Sbjct: 127 NGFIQSYNNTYNQIGPKLDSVIEQYPDYQIAVTGHSLGGAAALLFGINLKVNGHDPLVVT 186 Query: 179 FGEPRSGNQAFASYMNDA-FQVSSPETT------QYFRVTHSNDGIPNLPPAEQGYAHGG 231 G+P GN FA++++ F +P+ + + +R+TH D +P +P + GY H Sbjct: 187 LGQPIVGNAGFANWVDKLFFGQENPDVSKVSKDRKLYRITHRGDIVPQVPFWD-GYQHCS 245 Query: 232 VEY---WSVDPYSAQNTFVCTGDEVQCCEAQGG--QGVN--DAHTTYFGMTSGAC 279 E W + N +C G + C A Q VN H YF +T G C Sbjct: 246 GEVFIDWPLIHPPLSNVVMCQGQSNKQCSAGNTLLQQVNVIGNHLQYF-VTEGVC 299 >5XK2-A nrPDB Length = 286 Score = 87.4 bits (215), Expect = 6e-18, Method: Compositional matrix adjust. Identities = 55/178 (30%), Positives = 87/178 (48%), Gaps = 21/178 (11%) Query: 67 TDINGWILRDDTSKEIITVFRGTGSDTNLQLDTNYTLTPFDTLPQ-----CNDCEVHGGY 121 TD G++ D+T+K I+ FRG+ S N D T PQ C+ C+ G+ Sbjct: 69 TDTAGFVAVDNTNKAIVVAFRGSYSIRNWVTDA--------TFPQTDPGLCDGCKAELGF 120 Query: 122 YIGWISVQDQVESLVKQQASQYPDYALTVTGHSLGASMAALTAAQLSATYDNVRLYTFGE 181 + W V+D++ + + ++ DY + V GHSLGA++A+L AA L + LY + Sbjct: 121 WTAWKVVRDRIIKTLDELKPEHSDYKIVVVGHSLGAAIASLAAADLRTKNYDAILYAYAA 180 Query: 182 PRSGNQAFASYMNDAFQVSSPETTQYFRVTHSNDGIPNLPPAEQGYAHGGVEYWSVDP 239 PR N+ A ++ + +R TH++D +P LP GY H EY+ P Sbjct: 181 PRVANKPLAEFITNQ--------GNNYRFTHNDDPVPKLPLLTMGYVHISPEYYITAP 230 >3G7N-A nrPDB Length = 258 Score = 81.6 bits (200), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 67/255 (26%), Positives = 113/255 (44%), Gaps = 17/255 (6%) Query: 35 LVEMATISQAAYADLCNIPSTIIKGEKIYNAQTDINGWILRDDTSKEIITVFRGTGSDTN 94 L A +S AAY + ++IY+ TD NG++ K I + RG+ + T+ Sbjct: 11 LHRAAKLSSAAYTGCIGKAFDVTIVKRIYDLVTDTNGFVGYSTEKKTIAVIMRGSTTITD 70 Query: 95 LQLDTNYTL-TP-FDTLPQCNDCEVHGGYYIGWISVQDQVESLVKQQASQYPDYALTVTG 152 D + L TP + +D ++ G + W +V D + + VK ++YPDY L G Sbjct: 71 FVNDIDIALITPELSGVTFPSDVKIMRGVHRPWSAVHDTIITEVKALIAKYPDYTLEAVG 130 Query: 153 HSLGASMAALTAAQLSATYDNVRLYT--FGEPRSGNQAFASYMNDAFQVSSPETTQYFRV 210 HSLG ++ ++ L+ + + L + GNQA+A + + + + R Sbjct: 131 HSLGGALTSIAHVALAQNFPDKSLVSNALNAFPIGNQAWADF-------GTAQAGTFNRG 183 Query: 211 THSNDGIPNLPPAEQ-GYAHGGVEYWSVDPYSAQNTFVCTGDEVQCCEAQGGQ-GVNDAH 268 + DG+PN+ + + H G EY+S + +T C G + C A G V H Sbjct: 184 NNVLDGVPNMYSSPLVNFKHYGTEYYSSG--TEASTVKCEGQRDKSCSAGNGMYAVTPGH 241 Query: 269 TTYFG--MTSGACTW 281 FG M + C + Sbjct: 242 IASFGVVMLTAGCGY 256 >5GW8-A nrPDB Length = 286 Score = 57.4 bits (137), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 40/146 (27%), Positives = 69/146 (47%), Gaps = 11/146 (7%) Query: 109 LPQCNDCEVHGGYYIGWISVQDQVESLVKQQASQYPDYALTVTGHSLGASMAALTAAQLS 168 LPQ +V G+ G+ + D + VK+ + + +TV GHSLGA++ L + ++ Sbjct: 110 LPQG--TKVMNGFQKGYTDLVDDIFDHVKKFKQEKNESRVTVIGHSLGAAIGLLASLDIN 167 Query: 169 ATYDN--VRLYTFGEPRSGNQAFASYMNDAFQVSSPETTQYFRVTHSNDGIPNLPPAEQG 226 ++ + Y FG PR GN FA++++ + V + D +P +PP G Sbjct: 168 LRLEDGLFKSYLFGLPRVGNPIFANFVDRKI------GDKLHWVVNGRDWVPTVPPRALG 221 Query: 227 YAHGGVEYWSVDPYSAQNTFVCTGDE 252 Y H W + P ++ N + G E Sbjct: 222 YQHPSNYVW-IYPANSTNWKLYPGQE 246 >4ZRE-A nrPDB Length = 285 Score = 54.7 bits (130), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 30/90 (33%), Positives = 43/90 (47%), Gaps = 8/90 (8%) Query: 148 LTVTGHSLGASMAALTAAQLSATYDN--VRLYTFGEPRSGNQAFASYMNDAFQVSSPETT 205 +TV GHSLGA+M L A + D + Y FG PR GN FAS+++ Sbjct: 146 VTVIGHSLGAAMGLLCAMDIELRMDGGLYKTYLFGLPRLGNPTFASFVDQKI------GD 199 Query: 206 QYFRVTHSNDGIPNLPPAEQGYAHGGVEYW 235 ++ + + D +P +PP GY H W Sbjct: 200 KFHSIINGRDWVPTVPPRALGYQHPSDYVW 229 >2YIJ-A nrPDB Length = 419 Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 47/181 (25%), Positives = 75/181 (41%), Gaps = 34/181 (18%) Query: 80 KEIITVFRGTGSDTNLQLDTNYTLT-PFDTLPQCND-CEVHGGYYIGWIS---------- 127 ++I+ +RG+ D + L + ND ++H G+Y ++S Sbjct: 147 RDIVVSWRGSVQPLEWVEDFEFGLVNAIKIFGERNDQVQIHQGWYSIYMSQDERSPFTKT 206 Query: 128 -VQDQVESLVKQQASQYPD--YALTVTGHSLGASMAALTAAQLSATYDN----------- 173 +DQV V + +Y D ++T+ GHSLGA++A L+A + A N Sbjct: 207 NARDQVLREVGRLLEKYKDEEVSITICGHSLGAALATLSATDIVANGYNRPKSRPDKSCP 266 Query: 174 VRLYTFGEPRSGNQAFASYMNDAFQVSSPETTQYFRVTHSNDGIPNLPPAEQGYAHGGVE 233 V + F PR G+ F S E + R + D IP PP GY+ G E Sbjct: 267 VTAFVFASPRVGDSDFRKLF------SGLEDIRVLRTRNLPDVIPIYPPI--GYSEVGDE 318 Query: 234 Y 234 + Sbjct: 319 F 319 >2Z84-A nrPDB Length = 218 Score = 35.8 bits (81), Expect = 0.019, Method: Compositional matrix adjust. Identities = 27/94 (28%), Positives = 47/94 (50%), Gaps = 14/94 (14%) Query: 49 LCNIPSTI-IKGE--KIYNAQTDINGWIL----RDDTSKEIITVFRGTGSDTN-LQLDTN 100 LC++P + ++GE ++Y+ T G ++ D SK ++ + G GS+ L LD + Sbjct: 113 LCHLPRGVGLRGEEERLYSHFTTGGGPVMVGGDADAQSKALLGICEGPGSEVYVLILDPH 172 Query: 101 YTLTPFDTLPQCNDCEVHGGYYIGWISVQDQVES 134 Y TP N CE+ ++GW V+ +S Sbjct: 173 YWGTPK------NRCELQAAGWVGWQKVKSVFDS 200 >3JWE-A nrPDB Length = 320 Score = 32.7 bits (73), Expect = 0.16, Method: Compositional matrix adjust. Identities = 38/156 (24%), Positives = 62/156 (39%), Gaps = 34/156 (21%) Query: 78 TSKEIITVFRGTGSDTNLQLDTNYTLTPFDTLPQCNDCEVHG----------GYYIGWIS 127 T K +I V G G + + L D L +D HG +++ Sbjct: 57 TPKALIFVSHGAGEHSGRYEELARMLMGLDLLVFAHDHVGHGQSEGERMVVSDFHVFVRD 116 Query: 128 VQDQVESLVKQQASQYPDYALTVTGHSLGASMAALTAAQLSATYDNVRLYTFGEPRSGNQ 187 V V+S+ K YP + + GHS+G ++A LTAA+ R G+ Sbjct: 117 VLQHVDSMQKD----YPGLPVFLLGHSMGGAIAILTAAE----------------RPGHF 156 Query: 188 AFASYMNDAFQVSSPETTQYFRVTHS---NDGIPNL 220 A + +++PE+ F+V + N +PNL Sbjct: 157 A-GMVLISPLVLANPESATTFKVLAAKVLNLVLPNL 191 >2ORY-A nrPDB Length = 346 Score = 29.6 bits (65), Expect = 1.4, Method: Compositional matrix adjust. Identities = 23/79 (29%), Positives = 35/79 (44%), Gaps = 15/79 (18%) Query: 148 LTVTGHSLGASMAALTA--------AQLSATYDNVRLYTFGEPRSGNQAFASYMNDAFQV 199 + VTGHS G ++++ A +LS D + F P +GN FA Y +D Sbjct: 168 ICVTGHSKGGALSSTLALWLKDIQGVKLSQNID-ISTIPFAGPTAGNADFADYFDDCL-- 224 Query: 200 SSPETTQYFRVTHSNDGIP 218 Q R+ +S D +P Sbjct: 225 ----GDQCTRIANSLDIVP 239 >5I7I-A nrPDB Length = 341 Score = 28.1 bits (61), Expect = 4.3, Method: Compositional matrix adjust. Identities = 14/45 (31%), Positives = 22/45 (48%), Gaps = 1/45 (2%) Query: 47 ADLCNIPSTIIKGEKIYNAQTDINGWILRDDTSKEIITVFRGTGS 91 A C+ P I EK+ + D+NG +R T + I + G G+ Sbjct: 140 AVFCHAPGKIHTKEKVIKSAADLNGMKMRGPT-RVITKMLEGLGA 183 >5G56-A nrPDB Length = 862 Score = 28.1 bits (61), Expect = 4.5, Method: Compositional matrix adjust. Identities = 13/40 (32%), Positives = 22/40 (55%) Query: 115 CEVHGGYYIGWISVQDQVESLVKQQASQYPDYALTVTGHS 154 + GGY +GWIS + +E ++ + Y + +L V G S Sbjct: 379 SDTGGGYNVGWISEGEWLEYTIRVRNPGYYNLSLRVAGIS 418 >5DT6-A nrPDB Length = 267 Score = 28.1 bits (61), Expect = 4.8, Method: Compositional matrix adjust. Identities = 19/70 (27%), Positives = 31/70 (44%), Gaps = 3/70 (4%) Query: 162 LTAAQLSATYDNVRLYTFGEPRSGNQAFASYMNDAFQVSSPETTQYFRVTHSNDGIPNLP 221 + ++ L Y +++ YT+GE GN F Y D + + + + + DG Sbjct: 10 IVSSLLEEPYLSLKQYTYGESLVGNDRFEGYCKDLADMLAAQLGIKYEIRLVQDGNYG-- 67 Query: 222 PAEQGYAHGG 231 AE YA GG Sbjct: 68 -AENQYAPGG 76 >5LA1-A nrPDB Length = 491 Score = 28.1 bits (61), Expect = 5.0, Method: Compositional matrix adjust. Identities = 13/36 (36%), Positives = 21/36 (58%) Query: 119 GGYYIGWISVQDQVESLVKQQASQYPDYALTVTGHS 154 GGY +GWIS + +E ++ + Y + +L V G S Sbjct: 385 GGYNVGWISEGEWLEYTIRVRNPGYYNLSLRVAGIS 420 >1FCP-A nrPDB Length = 705 Score = 26.9 bits (58), Expect = 9.0, Method: Compositional matrix adjust. Identities = 22/75 (29%), Positives = 31/75 (41%), Gaps = 3/75 (4%) Query: 4 FSAKYALILLATAGQALAASTQGISEDLYNRLVEMATISQAAYADLCNIPSTIIKGEKIY 63 +S + A + A G LA E L N V+ S+ A D I T++ G Sbjct: 307 YSKQCAALAPADKGHYLARKYVVDDEKLQNFSVDTQLQSKFATGD---IDHTLLTGVDFM 363 Query: 64 NAQTDINGWILRDDT 78 + DIN W DD+ Sbjct: 364 RMRNDINAWFGYDDS 378 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: 1UWC-A nrPDB 357 3e-99 1DT3-A nrPDB 279 8e-76 3G7N-A nrPDB 252 9e-68 3O0D-A nrPDB 246 6e-66 6QPR-A nrPDB 246 7e-66 4TGL-A nrPDB 241 2e-64 1LGY-A nrPDB 238 2e-63 5CH8-A nrPDB 217 5e-57 3NGM-A nrPDB 216 1e-56 5XK2-A nrPDB 202 2e-52 5GW8-A nrPDB 172 1e-43 2YIJ-A nrPDB 147 5e-36 4ZRE-A nrPDB 146 8e-36 Sequences not found previously or not previously below threshold: 2ORY-A nrPDB 52 3e-07 4NFU-A nrPDB 40 0.001 3JWE-A nrPDB 40 0.001 2PPL-A nrPDB 39 0.003 6EIC-C nrPDB 36 0.022 4XJV-A nrPDB 36 0.028 1RP1-A nrPDB 35 0.049 2Z8X-A nrPDB 34 0.057 4Q3K-A nrPDB 34 0.063 2Y8B-A nrPDB 34 0.064 5V41-A nrPDB 34 0.072 2QUB-A nrPDB 34 0.099 4NFU-B nrPDB 34 0.11 1ETH-A nrPDB 33 0.14 2XMZ-A nrPDB 33 0.17 3FCX-A nrPDB 32 0.23 4KXA-A nrPDB 32 0.35 4B6G-A nrPDB 31 0.50 1LPA-B nrPDB 31 0.64 1GPL-A nrPDB 30 1.2 1W52-X nrPDB 30 1.2 4GDM-A nrPDB 29 1.9 1FBL-A nrPDB 29 1.9 3BLE-A nrPDB 29 2.1 3U14-A nrPDB 29 3.2 3BF8-A nrPDB 28 3.9 3LS2-A nrPDB 28 4.3 1P0F-A nrPDB 28 4.6 6GUD-A nrPDB 28 4.7 3TEJ-A nrPDB 28 4.8 3D2A-A nrPDB 28 6.1 5UGZ-A nrPDB 27 8.4 2AXR-A nrPDB 27 8.8 3I6Y-A nrPDB 27 9.4 >1UWC-A nrPDB Length = 261 Score = 357 bits (916), Expect = 3e-99, Method: Composition-based stats. Identities = 260/260 (100%), Positives = 260/260 (100%) Query: 22 ASTQGISEDLYNRLVEMATISQAAYADLCNIPSTIIKGEKIYNAQTDINGWILRDDTSKE 81 ASTQGISEDLYNRLVEMATISQAAYADLCNIPSTIIKGEKIYNAQTDINGWILRDDTSKE Sbjct: 1 ASTQGISEDLYNRLVEMATISQAAYADLCNIPSTIIKGEKIYNAQTDINGWILRDDTSKE 60 Query: 82 IITVFRGTGSDTNLQLDTNYTLTPFDTLPQCNDCEVHGGYYIGWISVQDQVESLVKQQAS 141 IITVFRGTGSDTNLQLDTNYTLTPFDTLPQCNDCEVHGGYYIGWISVQDQVESLVKQQAS Sbjct: 61 IITVFRGTGSDTNLQLDTNYTLTPFDTLPQCNDCEVHGGYYIGWISVQDQVESLVKQQAS 120 Query: 142 QYPDYALTVTGHSLGASMAALTAAQLSATYDNVRLYTFGEPRSGNQAFASYMNDAFQVSS 201 QYPDYALTVTGHSLGASMAALTAAQLSATYDNVRLYTFGEPRSGNQAFASYMNDAFQVSS Sbjct: 121 QYPDYALTVTGHSLGASMAALTAAQLSATYDNVRLYTFGEPRSGNQAFASYMNDAFQVSS 180 Query: 202 PETTQYFRVTHSNDGIPNLPPAEQGYAHGGVEYWSVDPYSAQNTFVCTGDEVQCCEAQGG 261 PETTQYFRVTHSNDGIPNLPPAEQGYAHGGVEYWSVDPYSAQNTFVCTGDEVQCCEAQGG Sbjct: 181 PETTQYFRVTHSNDGIPNLPPAEQGYAHGGVEYWSVDPYSAQNTFVCTGDEVQCCEAQGG 240 Query: 262 QGVNDAHTTYFGMTSGACTW 281 QGVNDAHTTYFGMTSGACTW Sbjct: 241 QGVNDAHTTYFGMTSGACTW 260 >1DT3-A nrPDB Length = 269 Score = 279 bits (714), Expect = 8e-76, Method: Composition-based stats. Identities = 81/276 (29%), Positives = 129/276 (46%), Gaps = 32/276 (11%) Query: 27 ISEDLYNRLVEMATISQAAYADL-------CNIPST------IIKGEKIY------NAQT 67 +S+DL+N+ A S AAY NI T + K + + + Sbjct: 2 VSQDLFNQFNLFAQYSAAAYCGKNNDAPAGTNITCTGNACPEVEKADATFLYSFEDSGVG 61 Query: 68 DINGWILRDDTSKEIITVFRGTGSDTNLQLDTNYTLTPFDTLPQCNDCEVHGGYYIGWIS 127 D+ G++ D+T+K I+ FRG+ S N + N+ L + + C+ C H G+ W S Sbjct: 62 DVTGFLALDNTNKLIVLSFRGSRSIENWIGNLNFDLKEINDI--CSGCRGHDGFTSSWRS 119 Query: 128 VQDQVESLVKQQASQYPDYALTVTGHSLGASMAALTAAQLSATYDNVRLYTFGEPRSGNQ 187 V D + V+ ++PDY + TGHSLG ++A + A L ++ ++++G PR GN+ Sbjct: 120 VADTLRQKVEDAVREHPDYRVVFTGHSLGGALATVAGADLRGNGYDIDVFSYGAPRVGNR 179 Query: 188 AFASYMNDAFQVSSPETTQYFRVTHSNDGIPNLPPAEQGYAHGGVEYWS----VDPYSAQ 243 AFA ++ +R+TH+ND +P LPP E GY+H EYW + P + Sbjct: 180 AFAEFLTVQT------GGTLYRITHTNDIVPRLPPREFGYSHSSPEYWIKSGTLVPVTRN 233 Query: 244 NTFVCTGDEVQCCEAQGGQGVNDAHTTYFGMTSGAC 279 + G + Q AH YFG+ G C Sbjct: 234 DIVKIEGIDATGGNNQPNIPDIPAHLWYFGLI-GTC 268 >3G7N-A nrPDB Length = 258 Score = 252 bits (644), Expect = 9e-68, Method: Composition-based stats. Identities = 65/258 (25%), Positives = 112/258 (43%), Gaps = 17/258 (6%) Query: 32 YNRLVEMATISQAAYADLCNIPSTIIKGEKIYNAQTDINGWILRDDTSKEIITVFRGTGS 91 + L A +S AAY + ++IY+ TD NG++ K I + RG+ + Sbjct: 8 FPDLHRAAKLSSAAYTGCIGKAFDVTIVKRIYDLVTDTNGFVGYSTEKKTIAVIMRGSTT 67 Query: 92 DTNLQLDTNYTLT--PFDTLPQCNDCEVHGGYYIGWISVQDQVESLVKQQASQYPDYALT 149 T+ D + L + +D ++ G + W +V D + + VK ++YPDY L Sbjct: 68 ITDFVNDIDIALITPELSGVTFPSDVKIMRGVHRPWSAVHDTIITEVKALIAKYPDYTLE 127 Query: 150 VTGHSLGASMAALTAAQLSATYDNVRLYT--FGEPRSGNQAFASYMNDAFQVSSPETTQY 207 GHSLG ++ ++ L+ + + L + GNQA+A + + + + Sbjct: 128 AVGHSLGGALTSIAHVALAQNFPDKSLVSNALNAFPIGNQAWADF-------GTAQAGTF 180 Query: 208 FRVTHSNDGIPNLPPAEQ-GYAHGGVEYWSVDPYSAQNTFVCTGDEVQCCEAQGGQ-GVN 265 R + DG+PN+ + + H G EY+S + +T C G + C A G V Sbjct: 181 NRGNNVLDGVPNMYSSPLVNFKHYGTEYYSSG--TEASTVKCEGQRDKSCSAGNGMYAVT 238 Query: 266 DAHTTYFG--MTSGACTW 281 H FG M + C + Sbjct: 239 PGHIASFGVVMLTAGCGY 256 >3O0D-A nrPDB Length = 301 Score = 246 bits (629), Expect = 6e-66, Method: Composition-based stats. Identities = 75/299 (25%), Positives = 122/299 (40%), Gaps = 41/299 (13%) Query: 21 AASTQGISEDLYNRLVEMATISQAAYAD----------LCNIPS----TIIKGEKIYN-- 64 + T I ++ YN + A ++ Y C + + E+ ++ Sbjct: 4 STETSHIDQESYNFFEKYARLANIGYCVGPGTKIFKPFNCGLQCAHFPNVELIEEFHDPR 63 Query: 65 AQTDINGWILRDDTSKEIITVFRGTGSDTNLQLDTNYTLTPFDTL---------PQCNDC 115 D++G++ D SK+I V RGT S ++ D P C+DC Sbjct: 64 LIFDVSGYLAVDHASKQIYLVIRGTHSLEDVITDIRIMQAPLTNFDLAANISSTATCDDC 123 Query: 116 EVHGGYYIGWISVQDQVESLVKQQASQYPDYALTVTGHSLGASMAALTAAQLSATYDNVR 175 VH G+ + + +Q+ + QYPDY + VTGHSLG + A L L + Sbjct: 124 LVHNGFIQSYNNTYNQIGPKLDSVIEQYPDYQIAVTGHSLGGAAALLFGINLKVNGHDPL 183 Query: 176 LYTFGEPRSGNQAFASYMNDA-FQVSSPETT------QYFRVTHSNDGIPNLPPAEQGYA 228 + T G+P GN FA++++ F +P+ + + +R+TH D +P +P + GY Sbjct: 184 VVTLGQPIVGNAGFANWVDKLFFGQENPDVSKVSKDRKLYRITHRGDIVPQVPFWD-GYQ 242 Query: 229 HGGVEY---WSVDPYSAQNTFVCTGDEVQCCEAQGGQ----GVNDAHTTYFGMTSGACT 280 H E W + N +C G + C A V H YF +T G C Sbjct: 243 HCSGEVFIDWPLIHPPLSNVVMCQGQSNKQCSAGNTLLQQVNVIGNHLQYF-VTEGVCG 300 >6QPR-A nrPDB Length = 361 Score = 246 bits (628), Expect = 7e-66, Method: Composition-based stats. Identities = 93/298 (31%), Positives = 132/298 (44%), Gaps = 36/298 (12%) Query: 7 KYALILLATAG-----QALAASTQGISEDLYNRLVEMATISQAAYA---------DL--C 50 KY + L AT+ QA+ + + N L T+S +Y D C Sbjct: 76 KYGMALNATSYPDSVVQAMDGGIRAATSQEINELTYYTTLSANSYCRTVIPGATWDCIHC 135 Query: 51 NIPSTIIKGEKIYNAQTDINGWILRDDTSKEIITVFRGTGSDTNLQLDTNYTLTPFDTLP 110 + + + D N + R D+ K I VFRG+ S N D + + P Sbjct: 136 DATEDLKIIKTWSTLIYDTNAMVARGDSEKTIYIVFRGSSSIRNWIADLTFVPVSY---P 192 Query: 111 QCNDCEVHGGYYIGWISVQDQVESLVKQQASQYPDYALTVTGHSLGASMAALTAAQL--- 167 + +VH G+ + VQ+++ + V Q QYP Y + VTGHSLG + A L A L Sbjct: 193 PVSGTKVHKGFLDSYGEVQNELVATVLDQFKQYPSYKVAVTGHSLGGATALLCALDLYQR 252 Query: 168 --SATYDNVRLYTFGEPRSGNQAFASYMNDAFQVSSPETTQYFRVTHSNDGIPNLPPAEQ 225 + N+ LYT G+PR G+ AFA+Y+ Y R + D +P+LPPA Sbjct: 253 EEGLSSSNLFLYTQGQPRVGDPAFANYVVST-------GIPYRRTVNERDIVPHLPPAAF 305 Query: 226 GYAHGGVEYWSVDPYSAQNTFVCTGD-EVQCCEAQ--GGQGVNDAHTTYFGMTSGACT 280 G+ H G EYW D S + VCT D E C V D H +YFG+ +G CT Sbjct: 306 GFLHAGEEYWITD-NSPETVQVCTSDLETSDCSNSIVPFTSVLD-HLSYFGINTGLCT 361 >4TGL-A nrPDB Length = 269 Score = 241 bits (615), Expect = 2e-64, Method: Composition-based stats. Identities = 92/283 (32%), Positives = 127/283 (44%), Gaps = 36/283 (12%) Query: 17 GQALAASTQGISEDLYNRLVEMATISQAAYA---------DL--CNIPSTIIKGEKIYNA 65 G AA++Q I N L T+S +Y D C+ + + Sbjct: 4 GGIRAATSQEI-----NELTYYTTLSANSYCRTVIPGATWDCIHCDATEDLKIIKTWSTL 58 Query: 66 QTDINGWILRDDTSKEIITVFRGTGSDTNLQLDTNYTLTPFDTLPQCNDCEVHGGYYIGW 125 D N + R D+ K I VFRG+ S N D + + P + +VH G+ + Sbjct: 59 IYDTNAMVARGDSEKTIYIVFRGSSSIRNWIADLTFVPVSY---PPVSGTKVHKGFLDSY 115 Query: 126 ISVQDQVESLVKQQASQYPDYALTVTGHSLGASMAALTAAQL-----SATYDNVRLYTFG 180 VQ+++ + V Q QYP Y + VTGHSLG + A L A L + N+ LYT G Sbjct: 116 GEVQNELVATVLDQFKQYPSYKVAVTGHSLGGATALLCALDLYQREEGLSSSNLFLYTQG 175 Query: 181 EPRSGNQAFASYMNDAFQVSSPETTQYFRVTHSNDGIPNLPPAEQGYAHGGVEYWSVDPY 240 +PR GN AFA+Y+ Y R + D +P+LPPA G+ H G EYW D Sbjct: 176 QPRVGNPAFANYVVST-------GIPYRRTVNERDIVPHLPPAAFGFLHAGSEYWITD-N 227 Query: 241 SAQNTFVCTGD-EVQCCEAQ--GGQGVNDAHTTYFGMTSGACT 280 S + VCT D E C V D H +YFG+ +G CT Sbjct: 228 SPETVQVCTSDLETSDCSNSIVPFTSVLD-HLSYFGINTGLCT 269 >1LGY-A nrPDB Length = 269 Score = 238 bits (606), Expect = 2e-63, Method: Composition-based stats. Identities = 79/286 (27%), Positives = 124/286 (43%), Gaps = 38/286 (13%) Query: 14 ATAGQALAASTQGISEDLYNRLVEMATISQAAYA---------DLCNIPSTIIKGEKIY- 63 + G+ +AA+T I E + A I+ AY D + G+ I Sbjct: 1 SDGGKVVAATTAQIQE-----FTKYAGIAATAYCRSVVPGNKWDCVQCQKWVPDGKIITT 55 Query: 64 --NAQTDINGWILRDDTSKEIITVFRGTGSDTNLQLDTNYTLTPFDTLPQCNDCEVHGGY 121 + +D NG++LR D K I VFRGT S + D + + + + +VH G+ Sbjct: 56 FTSLLSDTNGYVLRSDKQKTIYLVFRGTNSFRSAITDIVFNFSDYKPV---KGAKVHAGF 112 Query: 122 YIGWISVQDQVESLVKQQASQYPDYALTVTGHSLGASMAALTAAQL-----SATYDNVRL 176 + V + +V++Q + +P Y + VTGHSLG + A L L + N+ + Sbjct: 113 LSSYEQVVNDYFPVVQEQLTAHPTYKVIVTGHSLGGAQALLAGMDLYQREPRLSPKNLSI 172 Query: 177 YTFGEPRSGNQAFASYMNDAFQVSSPETTQYFRVTHSNDGIPNLPPAEQGYAHGGVEYWS 236 +T G PR GN FA Y+ + R H D +P++PP G+ H GVE W Sbjct: 173 FTVGGPRVGNPTFAYYVEST-------GIPFQRTVHKRDIVPHVPPQSFGFLHPGVESWI 225 Query: 237 VDPYSAQNTFVCTGD-EVQCCEAQ--GGQGVNDAHTTYFGMTSGAC 279 N +CT + E + C + D H +YF + G+C Sbjct: 226 KS--GTSNVQICTSEIETKDCSNSIVPFTSILD-HLSYFDINEGSC 268 >5CH8-A nrPDB Length = 279 Score = 217 bits (552), Expect = 5e-57, Method: Composition-based stats. Identities = 69/223 (30%), Positives = 95/223 (42%), Gaps = 19/223 (8%) Query: 64 NAQTDINGWILRDDTSKEIITVFRGTGSDTNLQLDTNYTLTPFDTLPQCNDCEVHGGYYI 123 + TD G+I D T+ ++ FRG+ S N D + T C+ C G++ Sbjct: 58 STITDTAGYIAVDHTNSAVVLAFRGSYSVRNWVADATFVHTN---PGLCDGCLAELGFWS 114 Query: 124 GWISVQDQVESLVKQQASQYPDYALTVTGHSLGASMAALTAAQLSATYDN-VRLYTFGEP 182 W V+D + +K+ +Q P+Y L V GHSLGA++A L A L +LY + P Sbjct: 115 SWKLVRDDIIKELKEVVAQNPNYELVVVGHSLGAAVATLAATDLRGKGYPSAKLYAYASP 174 Query: 183 RSGNQAFASYMNDAFQVSSPETTQYFRVTHSNDGIPNLPPAEQGYAHGGVEYWSVDPY-- 240 R GN A A Y+ FR TH+ND +P LP GY H EYW P Sbjct: 175 RVGNAALAKYITAQ--------GNNFRFTHTNDPVPKLPLLSMGYVHVSPEYWITSPNQA 226 Query: 241 --SAQNTFVCTGDEVQCCEAQGGQGVN---DAHTTYFGMTSGA 278 S + V GD G + +AH YF Sbjct: 227 TVSTSDIKVIDGDVSFDGNTGTGLPLLTDFEAHIWYFVQVDAG 269 >3NGM-A nrPDB Length = 319 Score = 216 bits (549), Expect = 1e-56, Method: Composition-based stats. Identities = 71/282 (25%), Positives = 111/282 (39%), Gaps = 38/282 (13%) Query: 27 ISEDLYNRLVEMATISQAAYAD----------LCNIPSTI------IKGEKIYNAQTDIN 70 +S + AAY + ++T I Sbjct: 4 VSTTDFGNFKFYIQHGAAAYCNSEAPAGAKVTCSGNGCPTVQSNGATIVASFTGSKTGIG 63 Query: 71 GWILRDDTSKEIITVFRGTGSDTNLQLDTNYTLTPFDTLPQCNDCEVHGGYYIGWISVQD 130 G++ D T KEI+ FRG+ + N + ++ D + C VH G+ W + Sbjct: 64 GYVATDPTRKEIVVSFRGSINIRNWLTNLDF---DQDDCSLTSGCGVHSGFQNAWNEISA 120 Query: 131 QVESLVKQQASQYPDYALTVTGHSLGASMAALTAAQLSATYDNVRLYTFGEPRSGNQAFA 190 + V + P + + GHSLG ++A L A L + +YT+G PR GN A Sbjct: 121 AATAAVAKARKANPSFKVVSVGHSLGGAVATLAGANLRIGGTPLDIYTYGSPRVGNTQLA 180 Query: 191 SYMNDAFQVSSPETTQYFRVTHSNDGIPNLPPAEQGYAHGGVEYWSVDP------YSAQN 244 +++++ + FRVT++ D +P LPP GY H EYW Y+ + Sbjct: 181 AFVSN-------QAGGEFRVTNAKDPVPRLPPLIFGYRHTSPEYWLSGSGGDKIDYTIND 233 Query: 245 TFVCTG-DEVQCCEAQGGQGVNDAHTTYFGMT----SGACTW 281 VC G +QC G + DAH YF T +G +W Sbjct: 234 VKVCEGAANLQCNGGTLGLDI-DAHLHYFQATDACSAGGISW 274 >5XK2-A nrPDB Length = 286 Score = 202 bits (513), Expect = 2e-52, Method: Composition-based stats. Identities = 61/219 (27%), Positives = 99/219 (45%), Gaps = 22/219 (10%) Query: 64 NAQTDINGWILRDDTSKEIITVFRGTGSDTNLQLDTNYTLTPFDTLPQCNDCEVHGGYYI 123 + TD G++ D+T+K I+ FRG+ S N D + P C+ C+ G++ Sbjct: 66 DTITDTAGFVAVDNTNKAIVVAFRGSYSIRNWVTDATF---PQTDPGLCDGCKAELGFWT 122 Query: 124 GWISVQDQVESLVKQQASQYPDYALTVTGHSLGASMAALTAAQLSATYDNVRLYTFGEPR 183 W V+D++ + + ++ DY + V GHSLGA++A+L AA L + LY + PR Sbjct: 123 AWKVVRDRIIKTLDELKPEHSDYKIVVVGHSLGAAIASLAAADLRTKNYDAILYAYAAPR 182 Query: 184 SGNQAFASYMNDAFQVSSPETTQYFRVTHSNDGIPNLPPAEQGYAHGGVEYWSVDP---- 239 N+ A ++ + +R TH++D +P LP GY H EY+ P Sbjct: 183 VANKPLAEFITNQ--------GNNYRFTHNDDPVPKLPLLTMGYVHISPEYYITAPDNTT 234 Query: 240 YSAQNTFVCTGD-EVQCCEAQGGQGVND-----AHTTYF 272 + V G + G G+ D +H YF Sbjct: 235 VTDNQVTVLDGYVNFKGNTGTSG-GLPDLLAFHSHVWYF 272 >5GW8-A nrPDB Length = 286 Score = 172 bits (436), Expect = 1e-43, Method: Composition-based stats. Identities = 52/236 (22%), Positives = 93/236 (39%), Gaps = 23/236 (9%) Query: 30 DLYNRLVEMATISQAAYADLCNIPSTIIKGEKIYNAQTDINGWI-----LRDDTSKEIIT 84 D++++ A ++Q Y + G+ T +G + L S I Sbjct: 23 DMFSQ---AAVLAQETYCGEQAHDYGLKLGDATL-LWTAGDGNVRQRVNLYQSDSLGIAV 78 Query: 85 VFRGTG--SDTNLQLDTNYTLTPFDTLP---QCNDCEVHGGYYIGWISVQDQVESLVKQQ 139 +GT S + D D+ +V G+ G+ + D + VK+ Sbjct: 79 AIQGTNTSSLRSDLHDAQLRPVDPDSRYRRFLPQGTKVMNGFQKGYTDLVDDIFDHVKKF 138 Query: 140 ASQYPDYALTVTGHSLGASMAALTAAQLSATYDN--VRLYTFGEPRSGNQAFASYMNDAF 197 + + +TV GHSLGA++ L + ++ ++ + Y FG PR GN FA++++ Sbjct: 139 KQEKNESRVTVIGHSLGAAIGLLASLDINLRLEDGLFKSYLFGLPRVGNPIFANFVDRKI 198 Query: 198 QVSSPETTQYFRVTHSNDGIPNLPPAEQGYAHGGVEYWSVDPYSAQNTFVCTGDEV 253 + V + D +P +PP GY H W P ++ N + G E Sbjct: 199 ------GDKLHWVVNGRDWVPTVPPRALGYQHPSNYVWI-YPANSTNWKLYPGQEN 247 >2YIJ-A nrPDB Length = 419 Score = 147 bits (371), Expect = 5e-36, Method: Composition-based stats. Identities = 59/238 (24%), Positives = 90/238 (37%), Gaps = 45/238 (18%) Query: 63 YNAQTDINGWILRDDTSKEIITVFRGTGSDTNLQLDTNYTLTP-FDTLPQCND-CEVHGG 120 Y A TD G L ++I+ +RG+ D + L + ND ++H G Sbjct: 132 YVAVTDDQGTALLG--RRDIVVSWRGSVQPLEWVEDFEFGLVNAIKIFGERNDQVQIHQG 189 Query: 121 YYIGWIS-----------VQDQVESLVKQQASQYPD--YALTVTGHSLGASMAALTAAQL 167 +Y ++S +DQV V + +Y D ++T+ GHSLGA++A L+A + Sbjct: 190 WYSIYMSQDERSPFTKTNARDQVLREVGRLLEKYKDEEVSITICGHSLGAALATLSATDI 249 Query: 168 SATYDN-----------VRLYTFGEPRSGNQAFASYMNDAFQVSSPETTQYFRVTHSNDG 216 A N V + F PR G+ F S E + R + D Sbjct: 250 VANGYNRPKSRPDKSCPVTAFVFASPRVGDSDFRKLF------SGLEDIRVLRTRNLPDV 303 Query: 217 IPNLPPAEQGYAHGGVEY--------WSVDPYSAQNTFVCTGDEVQCCEAQGGQGVND 266 IP PP GY+ G E+ + P + TF C + G D Sbjct: 304 IPIYPPI--GYSEVGDEFPIDTRKSPYMKSPGNLA-TFHCLEGYLHGVAGTQGTNKAD 358 >4ZRE-A nrPDB Length = 285 Score = 146 bits (369), Expect = 8e-36, Method: Composition-based stats. Identities = 52/232 (22%), Positives = 86/232 (37%), Gaps = 22/232 (9%) Query: 34 RLVEMATISQAAYADLCNIPSTIIKGEKIYNAQTDINGWI-----LRDDTSKEIITVFRG 88 + A + Q Y D I E +Y T G+ + S I G Sbjct: 25 EISLAAGLVQQTYCDSTENGLKIGDSELLY---TMGEGYARQRVNIYHSPSLGIAVAIEG 81 Query: 89 TG--SDTNLQLDTNY---TLTPFDTLPQCNDCEVHGGYYIGWISVQDQVESLVKQQASQY 143 T S + D + ++ G+ + + D + + VK+ + Sbjct: 82 TNLFSLNSDLHDAKFWQEDPNERYIQYYPKGTKLMHGFQQAYNDLMDDIFTAVKKYKKEK 141 Query: 144 PDYALTVTGHSLGASMAALTAAQLSATYDN--VRLYTFGEPRSGNQAFASYMNDAFQVSS 201 + +TV GHSLGA+M L A + D + Y FG PR GN FAS+++ Sbjct: 142 NEKRVTVIGHSLGAAMGLLCAMDIELRMDGGLYKTYLFGLPRLGNPTFASFVDQKI---- 197 Query: 202 PETTQYFRVTHSNDGIPNLPPAEQGYAHGGVEYWSVDPYSAQNTFVCTGDEV 253 ++ + + D +P +PP GY H W P ++ + + G E Sbjct: 198 --GDKFHSIINGRDWVPTVPPRALGYQHPSDYVWI-YPGNSTSAKLYPGQEN 246 >2ORY-A nrPDB Length = 346 Score = 52.1 bits (123), Expect = 3e-07, Method: Composition-based stats. Identities = 30/170 (17%), Positives = 57/170 (33%), Gaps = 40/170 (23%) Query: 78 TSKEIITVFRGTG--SDTNLQLDTNYTLTPFDTLPQCNDCEVHGGYYIGWISVQ------ 129 E + RGT S ++ + ++ ++ P + V G S Sbjct: 81 AEGEYVIAIRGTNPVSISDWLFN-DFMVSAMKKWPYAS---VEGRILKISESTSYGLKTL 136 Query: 130 -------------DQVESLVKQQASQYPDYALTVTGHSLGASMAA--------LTAAQLS 168 + + ++ + VTGHS G ++++ + +LS Sbjct: 137 QKLKPKSHIPGENKTILQFLNEKIGPEGKAKICVTGHSKGGALSSTLALWLKDIQGVKLS 196 Query: 169 ATYDNVRLYTFGEPRSGNQAFASYMNDAFQVSSPETTQYFRVTHSNDGIP 218 ++ F P +GN FA Y +D Q R+ +S D +P Sbjct: 197 QNI-DISTIPFAGPTAGNADFADYFDDCL------GDQCTRIANSLDIVP 239 >4NFU-A nrPDB Length = 636 Score = 40.1 bits (92), Expect = 0.001, Method: Composition-based stats. Identities = 22/123 (17%), Positives = 40/123 (32%), Gaps = 18/123 (14%) Query: 109 LPQCNDCEVHGGYYIGWISVQD---QVESLVKQQASQYPDYALTVTGHSLGASMAALTAA 165 + + + V+ + +V D ++ V+ + TGHS G + A L Sbjct: 90 IGKGDVATVNEAFLKNLEAVIDPRTSFQASVEMAVRSRK--QIVFTGHSSGGATAILATV 147 Query: 166 ----QLSATYDNVRL----YTFGEPRSGNQAFASYMNDAFQVSSPETTQYFRVTHSNDGI 217 + NV L TFG P G+ F+ + + D + Sbjct: 148 WYLEKYFIRNPNVYLEPRCVTFGAPLVGDSIFSHALGREKWSRF-----FVNFVTRFDIV 202 Query: 218 PNL 220 P + Sbjct: 203 PRI 205 >3JWE-A nrPDB Length = 320 Score = 39.8 bits (91), Expect = 0.001, Method: Composition-based stats. Identities = 28/107 (26%), Positives = 42/107 (39%), Gaps = 6/107 (5%) Query: 78 TSKEIITVFRGTGSDTNLQLDTNYTLTPFDTLPQCNDCEVHGGYYIGWISVQD------Q 131 T K +I V G G + + L D L +D HG + V D Sbjct: 57 TPKALIFVSHGAGEHSGRYEELARMLMGLDLLVFAHDHVGHGQSEGERMVVSDFHVFVRD 116 Query: 132 VESLVKQQASQYPDYALTVTGHSLGASMAALTAAQLSATYDNVRLYT 178 V V YP + + GHS+G ++A LTAA+ + + L + Sbjct: 117 VLQHVDSMQKDYPGLPVFLLGHSMGGAIAILTAAERPGHFAGMVLIS 163 >2PPL-A nrPDB Length = 485 Score = 38.6 bits (88), Expect = 0.003, Method: Composition-based stats. Identities = 31/148 (20%), Positives = 51/148 (34%), Gaps = 27/148 (18%) Query: 92 DTNLQLDTNYTLTPFDTLPQCNDCEVHGGYYIGWISVQDQVESLVKQQASQ--------- 142 D + D L + + C + G + + V +V Q +Q Sbjct: 109 DESWVTDMCKKLFEVEEVN-CICVDWKKGSQATYTQAANNV-RVVGAQVAQMLDILLTEY 166 Query: 143 -YPDYALTVTGHSLGASMAALTAAQLSATYDNVRLYTFGEPRSG--NQAFASYMNDAFQV 199 YP + + GHSLGA +A ++ T G R + AS+ + +V Sbjct: 167 SYPPSKVHLIGHSLGAHVAGEAGSK-----------TPGLSRITGLDPVEASFESTPEEV 215 Query: 200 S-SPETTQYFRVTHSNDGIPNLPPAEQG 226 P + V H+ D P +P G Sbjct: 216 RLDPSDADFVDVIHT-DAAPLIPFLGFG 242 >6EIC-C nrPDB Length = 279 Score = 35.9 bits (81), Expect = 0.022, Method: Composition-based stats. Identities = 22/114 (19%), Positives = 33/114 (28%), Gaps = 20/114 (17%) Query: 131 QVESLVKQQASQYPDYALTVTGHSLGASMAALTAAQLSATYDNVRLYTFGEPRSGNQAFA 190 ++LV +YP V GHS+G + + DN L P Q Sbjct: 87 DFDTLVGIATREYPGCKRIVLGHSMGGGIVFAYGVE---RPDNYDLMVLSAPAVAAQDLV 143 Query: 191 SYMNDAFQVSSPETTQYFRVTHSNDGIPNLPPAEQGYAHGG--VEY---WSVDP 239 S + +P LP E + E ++ DP Sbjct: 144 SPVVAVAAKLLGV------------VVPGLPVQELDFTAISRDPEVVQAYNTDP 185 >4XJV-A nrPDB Length = 271 Score = 35.5 bits (80), Expect = 0.028, Method: Composition-based stats. Identities = 18/104 (17%), Positives = 34/104 (32%), Gaps = 5/104 (4%) Query: 88 GTGSDTNLQLDTNYTLTPFDTLPQCNDCEVHGGYYIGWISVQDQVESLVKQQASQYPDYA 147 G+ DT+ L + V + D+V ++ P Sbjct: 44 GSTHFAKWGQDTHDLLEVHSLRLPGRESRVEEPLENDISQLVDEVVCALQPVIQDKP--- 100 Query: 148 LTVTGHSLGASMAALTAAQLSAT--YDNVRLYTFGEPRSGNQAF 189 GHS+G+ +A TA L + + L+ ++A+ Sbjct: 101 FAFFGHSMGSYIAFRTALGLKENNQPEPLHLFLSSATPVHSKAW 144 >1RP1-A nrPDB Length = 450 Score = 34.7 bits (78), Expect = 0.049, Method: Composition-based stats. Identities = 29/152 (19%), Positives = 50/152 (32%), Gaps = 37/152 (24%) Query: 93 TNLQLDTNYTLTPFDTLPQCNDCEVHGGYYIGWISVQDQVESLVKQQASQ---------- 142 N LD + + + C + G + + V +V Q +Q Sbjct: 85 ENWLLDMCKNMFKVEEVN-CICVDWKKGSQTSYTQAANNV-RVVGAQVAQMLSMLSANYS 142 Query: 143 YPDYALTVTGHSLGASMAALTAAQL----SATYDNVRLYTF-GEP---RSGNQAFASYMN 194 Y + + GHSLGA +A ++ T + +F G P R + A +++ Sbjct: 143 YSPSQVQLIGHSLGAHVAGEAGSRTPGLGRITGLDPVEASFQGTPEEVRL-DPTDADFVD 201 Query: 195 DAFQVSSPETTQYFRVTHSNDGIPNLPPAEQG 226 V H+ D P +P G Sbjct: 202 ---------------VIHT-DAAPLIPFLGFG 217 >2Z8X-A nrPDB Length = 617 Score = 34.4 bits (77), Expect = 0.057, Method: Composition-based stats. Identities = 35/151 (23%), Positives = 55/151 (36%), Gaps = 12/151 (7%) Query: 40 TISQAAYADLCNIPSTIIKGEKIYN-AQTDINGWILRDDTSKEIITVFRGTGSDT-NLQL 97 T SQ Y + T + Y AQ +I G EI FRGT NL L Sbjct: 93 TASQLGYDGKTDARGTFFGEKAGYTTAQVEILGKYDAQGHLTEIGIAFRGTSGPRENLIL 152 Query: 98 DTNYTLTP--FDTLPQCNDCEVHGGYYIGWISVQDQVESLVKQQASQYPDYALTVTGHSL 155 D+ + + + + G + ++ + V + K D + V+GHSL Sbjct: 153 DSIGDVINDLLAAFGPKDYAKNYVG--EAFGNLLNDVVAFAKANGLSGKD--VLVSGHSL 208 Query: 156 GA----SMAALTAAQLSATYDNVRLYTFGEP 182 G SMA L+ + + + + P Sbjct: 209 GGLAVNSMADLSGGKWGGFFADSNYIAYASP 239 >4Q3K-A nrPDB Length = 260 Score = 34.4 bits (77), Expect = 0.063, Method: Composition-based stats. Identities = 20/128 (15%), Positives = 39/128 (30%), Gaps = 9/128 (7%) Query: 99 TNYTLTPFDTLPQCNDCEVHGGYYIGWISVQDQV--ESLVKQQASQYPDYALTVTGHSLG 156 +Y ++ + H + I +D + PD + V G S G Sbjct: 78 LSYLAKGYNAFVLRYSVKEHAVFPRPLIDAEDALSYLKDNAHALHINPD-KIAVIGFSAG 136 Query: 157 ASMAALTAAQLSATYDNVRLYTFGEPR-SGNQAFASYMNDAFQVSSPETTQYFRVTHSND 215 +A A + G P ++ + ++ +PE + T +D Sbjct: 137 GHLATTLATEGKVR---PNAVVLGYPALIRHEKYWNFPTPKVDQQTPEMFVFH--TFEDD 191 Query: 216 GIPNLPPA 223 +P P Sbjct: 192 LVPLSHPL 199 >2Y8B-A nrPDB Length = 265 Score = 34.4 bits (77), Expect = 0.064, Method: Composition-based stats. Identities = 14/69 (20%), Positives = 23/69 (33%), Gaps = 4/69 (5%) Query: 114 DCEVHGGYYIGWISVQDQVESL----VKQQASQYPDYALTVTGHSLGASMAALTAAQLSA 169 C VH +V D + +K+ +YP+ + + GH L + L Sbjct: 196 GCAVHEASRESAGNVADANLAEWPATIKRIQQRYPEAEVVIPGHGLPGGLELLQHTTNVV 255 Query: 170 TYDNVRLYT 178 VR Sbjct: 256 KTHKVRPVA 264 >5V41-A nrPDB Length = 286 Score = 34.0 bits (76), Expect = 0.072, Method: Composition-based stats. Identities = 13/60 (21%), Positives = 23/60 (38%) Query: 118 HGGYYIGWISVQDQVESLVKQQASQYPDYALTVTGHSLGASMAALTAAQLSATYDNVRLY 177 G+ S++++ + V + D + G SLG +A A L +VR Sbjct: 50 MYGFERVEGSIEERAQQYVPKLIEMQGDGPYVLVGWSLGGVLAYACAIGLRRLGKDVRFV 109 >2QUB-A nrPDB Length = 615 Score = 33.6 bits (75), Expect = 0.099, Method: Composition-based stats. Identities = 39/169 (23%), Positives = 55/169 (32%), Gaps = 14/169 (8%) Query: 23 STQGISEDLYNRLVEMATISQAAYADLCNIPSTIIKGEKIYN-AQTDINGWILRDDTSKE 81 S Q E + N + + +Q YA + T Y AQ ++ G + Sbjct: 78 SEQAAQEAVNNAGWSVISATQLGYAGKTDARGTYYGETAGYTTAQAEVLGKYDSEGNLTA 137 Query: 82 IITVFRGTGSDTN-LQLDTNYTLTPFDTLPQCNDCEVHGGYYIGWI-SVQDQVESLVKQQ 139 I FRGT L DT + GY G+ + V + Sbjct: 138 IGISFRGTSGPRESLIGDTIGDVINDLLAGFGP-----KGYADGYTLKAFGNLLGDVAKF 192 Query: 140 ASQY--PDYALTVTGHSLGA----SMAALTAAQLSATYDNVRLYTFGEP 182 A + + V+GHSLG SMAA + A Y F P Sbjct: 193 AQAHGLSGEDVVVSGHSLGGLAVNSMAAQSDANWGGFYAQSNYVAFASP 241 >4NFU-B nrPDB Length = 540 Score = 33.6 bits (75), Expect = 0.11, Method: Composition-based stats. Identities = 16/69 (23%), Positives = 31/69 (44%), Gaps = 7/69 (10%) Query: 136 VKQQASQYPDYALTVTGHSLGASMAALTAA----QLSATYDNVRLYTFGEPRSGNQAFAS 191 ++ S+ P + +TG +LG S+A+L + T TFG P G+ + Sbjct: 134 LQTLKSEKP---VIITGAALGGSVASLYTLWLLETIEPTLKRPLCITFGSPLIGDASLQQ 190 Query: 192 YMNDAFQVS 200 + ++ + S Sbjct: 191 ILENSVRNS 199 >1ETH-A nrPDB Length = 448 Score = 33.2 bits (74), Expect = 0.14, Method: Composition-based stats. Identities = 38/210 (18%), Positives = 69/210 (32%), Gaps = 37/210 (17%) Query: 29 EDLYNRLVEMATISQAAYADLCNIPSTIIKGEKIYNAQTD--INGWILRDDTSKEIITVF 86 +D+ R + +Q Y +L PSTI + +T I+G+I + + Sbjct: 33 KDVDTRFLLYTNQNQNNYQELVADPSTITNSNFRMDRKTRFIIHGFIDKGE--------- 83 Query: 87 RGTGSDTNLQLDTNYTLTPFDTLPQCNDCEVHGGYYIGWISVQDQV---------ESLVK 137 + + L +++ C + GG G+ + V Sbjct: 84 ------EDWLSNICKNLFKVESVN-CICVDWKGGSRTGYTQASQNIRIVGAEVAYFVEVL 136 Query: 138 QQASQYPDYALTVTGHSLGASMAALTAAQLSATYDNVRLYTFGEPRS-GNQAFASYMNDA 196 + + Y + V GHSLG+ A + + T + + EP G Sbjct: 137 KSSLGYSPSNVHVIGHSLGSHAAGEAGRRTNGTIERITGLDPAEPCFQGTPELVRL---- 192 Query: 197 FQVSSPETTQYFRVTHSNDGIPNLPPAEQG 226 P ++ V H+ D P +P G Sbjct: 193 ----DPSDAKFVDVIHT-DAAPIIPNLGFG 217 >2XMZ-A nrPDB Length = 269 Score = 32.8 bits (73), Expect = 0.17, Method: Composition-based stats. Identities = 10/37 (27%), Positives = 21/37 (56%) Query: 130 DQVESLVKQQASQYPDYALTVTGHSLGASMAALTAAQ 166 D + +L+ + +Y D ++T+ G+S+G +A A Sbjct: 67 DYITTLLDRILDKYKDKSITLFGYSMGGRVALYYAIN 103 >3FCX-A nrPDB Length = 282 Score = 32.4 bits (72), Expect = 0.23, Method: Composition-based stats. Identities = 16/100 (16%), Positives = 35/100 (35%), Gaps = 5/100 (5%) Query: 122 YIGWISVQDQVESLVKQQASQYPDYALTVTGHSLGASMAALTAAQLSATYDNVRLYTFGE 181 Y + V +++ L+ P +++ GHS+G A + A + Y +V + Sbjct: 118 YRMYSYVTEELPQLINANFPVDPQ-RMSIFGHSMGGHGALICALKNPGKYKSVSAFA--- 173 Query: 182 PRSGNQAFASYMNDAFQVSSPETTQYFRVTHSNDGIPNLP 221 N + AF ++ + + + P Sbjct: 174 -PICNPVLCPWGKKAFSGYLGTDQSKWKAYDATHLVKSYP 212 >4KXA-A nrPDB Length = 888 Score = 31.7 bits (70), Expect = 0.35, Method: Composition-based stats. Identities = 13/69 (18%), Positives = 24/69 (34%), Gaps = 5/69 (7%) Query: 218 PNLPPAEQGYAHGGVEYWSVDPYSAQNTFVCTGDE-----VQCCEAQGGQGVNDAHTTYF 272 P+ PP++ GY W+ D ++ F + E +N H ++ Sbjct: 493 PSQPPSDLGYTWNIPVKWTEDNITSSVLFNRSEKEGITLNSSNPSGNAFLKINPDHIGFY 552 Query: 273 GMTSGACTW 281 + TW Sbjct: 553 RVNYEVATW 561 >4B6G-A nrPDB Length = 283 Score = 31.3 bits (69), Expect = 0.50, Method: Composition-based stats. Identities = 14/80 (17%), Positives = 34/80 (42%), Gaps = 6/80 (7%) Query: 122 YIGWISVQDQVESLVKQQASQY--PDYALTVTGHSLGASMAALTAAQLSATYDNVRLYT- 178 + + D + + + + ++ + ++ GHS+G A + A + Y +V ++ Sbjct: 119 WAANYQMYDYILNELPRLIEKHFPTNGKRSIMGHSMGGHGALVLALRNQERYQSVSAFSP 178 Query: 179 FGEPRS---GNQAFASYMND 195 P G +AF +Y+ Sbjct: 179 ILSPSLVPWGEKAFTAYLGK 198 >1LPA-B nrPDB Length = 449 Score = 30.9 bits (68), Expect = 0.64, Method: Composition-based stats. Identities = 28/148 (18%), Positives = 45/148 (30%), Gaps = 20/148 (13%) Query: 93 TNLQLDTNYTLTPFDTLPQCNDCEVHGGYYIGWISVQDQV---ESLVKQQAS------QY 143 N + L +++ C + GG G+ + + V Y Sbjct: 84 ENWLANVCKNLFKVESVN-CICVDWKGGSRTGYTQASQNIRIVGAEVAYFVEFLQSAFGY 142 Query: 144 PDYALTVTGHSLGASMAALTAAQLSATYDNVRLYTFGEPRS-GNQAFASYMNDAFQVSSP 202 + V GHSLGA A + + T + EP G P Sbjct: 143 SPSNVHVIGHSLGAHAAGEAGRRTNGTIGRITGLDPAEPCFQGTPELVRL--------DP 194 Query: 203 ETTQYFRVTHSNDGIPNLPPAEQGYAHG 230 ++ V H+ DG P +P G + Sbjct: 195 SDAKFVDVIHT-DGAPIVPNLGFGMSQV 221 >1GPL-A nrPDB Length = 432 Score = 30.1 bits (66), Expect = 1.2, Method: Composition-based stats. Identities = 19/80 (23%), Positives = 30/80 (37%), Gaps = 10/80 (12%) Query: 148 LTVTGHSLGASMAALTAAQLSATYDNVRLYTFGEPRSGNQAFASYMNDAFQVS-SPETTQ 206 + + GHSLGA A +L+ G + A + + +V P + Sbjct: 148 VHIIGHSLGAHTAGEAGKRLNG--------LVGRITGLDPAEPYFQDTPEEVRLDPSDAK 199 Query: 207 YFRVTHSNDGIPNLPPAEQG 226 + V H+ D P LP G Sbjct: 200 FVDVIHT-DISPILPSLGFG 218 >1W52-X nrPDB Length = 452 Score = 29.7 bits (65), Expect = 1.2, Method: Composition-based stats. Identities = 22/95 (23%), Positives = 32/95 (33%), Gaps = 9/95 (9%) Query: 132 VESLVKQQASQYPDYALTVTGHSLGASMAALTAAQLSATYDNVRLYTFGEPRSGNQAFAS 191 + + + S P+ + + GHSLGA A +L V EP + Sbjct: 133 LIQQLLTELSYNPE-NVHIIGHSLGAHTAGEAGRRLEGRVGRVTGLDPAEPCFQDA---- 187 Query: 192 YMNDAFQVSSPETTQYFRVTHSNDGIPNLPPAEQG 226 P Q+ V H+ D P LP G Sbjct: 188 ---SEEVRLDPSDAQFVDVIHT-DASPMLPSLGFG 218 >4GDM-A nrPDB Length = 268 Score = 29.4 bits (64), Expect = 1.9, Method: Composition-based stats. Identities = 15/53 (28%), Positives = 23/53 (43%) Query: 114 DCEVHGGYYIGWISVQDQVESLVKQQASQYPDYALTVTGHSLGASMAALTAAQ 166 D HGG + D V L+++ Y + G+SLG +A + A Q Sbjct: 62 DLPGHGGSAAISVDGFDDVTDLLRKTLVSYNILDFWLVGYSLGGRVAMMAACQ 114 >1FBL-A nrPDB Length = 370 Score = 29.4 bits (64), Expect = 1.9, Method: Composition-based stats. Identities = 24/125 (19%), Positives = 43/125 (34%), Gaps = 17/125 (13%) Query: 56 IIKGEKIYNAQTDINGWILRDDTSKEIITVF-RGTGSDTNLQLDTNYTLTPFDTLPQCND 114 I K ++++ + + + + +I+ F RG D +PFD Sbjct: 35 IEKAFQLWSNVSPLT-FTKVSEGQADIMISFVRGDHRDN----------SPFDGPG---G 80 Query: 115 CEVHGGYYIGWISVQDQVESLVKQQASQYPDYAL-TVTGHSLGASMAALTAAQLSATYDN 173 H + G D ++ + DY L V H LG S+ + + A Sbjct: 81 NLAHA-FQPGPGIGGDAHFDEDERWTKNFRDYNLYRVAAHELGHSLGLSHSTDIGALMYP 139 Query: 174 VRLYT 178 +YT Sbjct: 140 NYIYT 144 >3BLE-A nrPDB Length = 337 Score = 29.4 bits (64), Expect = 2.1, Method: Composition-based stats. Identities = 16/78 (20%), Positives = 30/78 (38%), Gaps = 5/78 (6%) Query: 130 DQVESLVKQQASQYPDYALTVTGHS---LGASMAALTAAQLSATYDNVRLYTFGEPRSGN 186 ++ V +YPD GH+ L + +L A + + + GE R+GN Sbjct: 198 EETFQGVDSLIQKYPDIHFEFHGHNDYDLSVA-NSLQAIRAGVKGLHASINGLGE-RAGN 255 Query: 187 QAFASYMNDAFQVSSPET 204 + + S+ +T Sbjct: 256 TPLEALVTTIHDKSNSKT 273 >3U14-A nrPDB Length = 535 Score = 28.6 bits (62), Expect = 3.2, Method: Composition-based stats. Identities = 11/47 (23%), Positives = 21/47 (44%) Query: 68 DINGWILRDDTSKEIITVFRGTGSDTNLQLDTNYTLTPFDTLPQCND 114 D N WI+ S+E G+ + N L++N++ + +C Sbjct: 187 DSNQWIMVVSKSQEYKIQIFGSANLKNWVLNSNFSSGYYGNQYECPG 233 >3BF8-A nrPDB Length = 255 Score = 28.2 bits (61), Expect = 3.9, Method: Composition-based stats. Identities = 14/75 (18%), Positives = 23/75 (30%), Gaps = 10/75 (13%) Query: 93 TNLQLDTNYTLTPFDTLPQCNDCEVHGGYYIGWISVQDQVESLVKQQASQYPDYALTVTG 152 +L D N V + ++ + + Q T G Sbjct: 37 RDLVNDHNIIQVDVRNHGLSPREPVMN-----YPAMAQDLVDTLDAQQID----KATFIG 87 Query: 153 HSLGA-SMAALTAAQ 166 HS+G ++ ALTA Sbjct: 88 HSMGGKAVMALTALA 102 >3LS2-A nrPDB Length = 280 Score = 28.2 bits (61), Expect = 4.3, Method: Composition-based stats. Identities = 11/59 (18%), Positives = 24/59 (40%), Gaps = 2/59 (3%) Query: 122 YIGWISVQDQVESLVKQQASQY--PDYALTVTGHSLGASMAALTAAQLSATYDNVRLYT 178 Y ++ D V + + Q+ ++GHS+G A + A + Y + ++ Sbjct: 113 YNTHFNMYDYVVNELPALIEQHFPVTSTKAISGHSMGGHGALMIALKNPQDYVSASAFS 171 >1P0F-A nrPDB Length = 373 Score = 28.2 bits (61), Expect = 4.6, Method: Composition-based stats. Identities = 9/52 (17%), Positives = 19/52 (36%), Gaps = 1/52 (1%) Query: 80 KEIITVFRGTGSDTNLQLDTNYTLTPFDTLPQCNDCEVHGGYYIGWISVQDQ 131 K I + GT + T + + + D C + G+ G+ + + Sbjct: 136 KPIYNLM-GTSTFTEYTVVADIAVAKIDPKAPLESCLIGCGFATGYGAAVNT 186 >6GUD-A nrPDB Length = 292 Score = 27.8 bits (60), Expect = 4.7, Method: Composition-based stats. Identities = 11/57 (19%), Positives = 19/57 (33%), Gaps = 3/57 (5%) Query: 128 VQDQVESLVKQQASQYPDYALTVTGHSLGASMAALTAAQLSATYDNVRLYTFGEPRS 184 +++ V V+ + Q + GHS G +A L + Y P Sbjct: 122 IENSVRPAVQARFPQVSLAREALYGHSYGGLLALHA---LFTRPQSFDCYIASSPSI 175 >3TEJ-A nrPDB Length = 329 Score = 27.8 bits (60), Expect = 4.8, Method: Composition-based stats. Identities = 12/41 (29%), Positives = 20/41 (48%) Query: 134 SLVKQQASQYPDYALTVTGHSLGASMAALTAAQLSATYDNV 174 + + Q P + G+SLG ++A AA+L A + V Sbjct: 154 AHLATLLEQQPHGPYYLLGYSLGGTLAQGIAARLRARGEQV 194 >3D2A-A nrPDB Length = 181 Score = 27.8 bits (60), Expect = 6.1, Method: Composition-based stats. Identities = 7/46 (15%), Positives = 15/46 (32%) Query: 136 VKQQASQYPDYALTVTGHSLGASMAALTAAQLSATYDNVRLYTFGE 181 V++ + + + HS+G + L + T G Sbjct: 59 VQKVLDETGAKKVDIVAHSMGGANTLYYIKNLDGGNKVANVVTLGG 104 >5UGZ-A nrPDB Length = 260 Score = 27.0 bits (58), Expect = 8.4, Method: Composition-based stats. Identities = 12/33 (36%), Positives = 15/33 (45%) Query: 128 VQDQVESLVKQQASQYPDYALTVTGHSLGASMA 160 + D V L +Q Y + GHSLG MA Sbjct: 72 MVDAVADLYQQFVKHYTGGDYAIFGHSLGGIMA 104 >2AXR-A nrPDB Length = 503 Score = 27.0 bits (58), Expect = 8.8, Method: Composition-based stats. Identities = 13/54 (24%), Positives = 25/54 (46%), Gaps = 5/54 (9%) Query: 162 LTAAQLSATY-DNVRLYTFG----EPRSGNQAFASYMNDAFQVSSPETTQYFRV 210 L A L+ TY +V Y + PR ++A ++++ F SS + + + Sbjct: 305 LYGADLNITYNYDVHEYFYANSLTAPRLSDEAIQAFVDYKFDNSSVRPGRGWWI 358 >3I6Y-A nrPDB Length = 280 Score = 27.0 bits (58), Expect = 9.4, Method: Composition-based stats. Identities = 23/133 (17%), Positives = 40/133 (30%), Gaps = 22/133 (16%) Query: 95 LQLDTNYTLTPFDTLPQCNDCEVHGGY-------------YIGWI---SVQDQVESLVKQ 138 L + + DT P+ GY W + D V + + + Sbjct: 72 LAAELGIAIVAPDTSPRGEGVADDEGYDLGQGAGFYVNATQAPWNRHYQMYDYVVNELPE 131 Query: 139 QASQ-YP-DYALTVTGHSLGASMAALTAAQLSATYDNVRLYTFGEPRSGNQAFASYMNDA 196 +P + GHS+G A A + Y +V ++ N + A Sbjct: 132 LIESMFPVSDKRAIAGHSMGGHGALTIALRNPERYQSVSAFS----PINNPVNCPWGQKA 187 Query: 197 FQVSSPETTQYFR 209 F + T +R Sbjct: 188 FTAYLGKDTDTWR 200 Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta Posted date: Jan 3, 2023 9:05 PM Number of letters in database: 10,336,785 Number of sequences in database: 36,641 Lambda K H 0.312 0.125 0.335 Lambda K H 0.267 0.0386 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 10,120,169 Number of Sequences: 36641 Number of extensions: 378310 Number of successful extensions: 1368 Number of sequences better than 10.0: 54 Number of HSP's better than 10.0 without gapping: 45 Number of HSP's successfully gapped in prelim test: 36 Number of HSP's that attempted gapping in prelim test: 1246 Number of HSP's gapped (non-prelim): 82 length of query: 281 length of database: 10,336,785 effective HSP length: 96 effective length of query: 185 effective length of database: 6,819,249 effective search space: 1261561065 effective search space used: 1261561065 T: 11 A: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.5 bits) S2: 58 (27.0 bits)