BLASTP 2.2.23 [Feb-03-2010] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= A0JNT9 (577 letters) Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta 36,641 sequences; 10,336,785 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value 6F1U-X nrPDB 1153 0.0 4M4Z-A nrPDB 34 0.18 4YTD-A nrPDB 30 2.0 6FG5-A nrPDB 30 2.1 3ZK8-A nrPDB 29 4.3 4UTP-A nrPDB 29 4.7 5JBJ-A nrPDB 29 5.0 2H2G-A nrPDB 28 7.8 >6F1U-X nrPDB Length = 577 Score = 1153 bits (2982), Expect = 0.0, Method: Compositional matrix adjust. Identities = 577/577 (100%), Positives = 577/577 (100%) Query: 1 MSAFCLGLAGRASAPAEPDSACCMELPAGAGDAVRSPATAAALVSFPGGPGELELALEEE 60 MSAFCLGLAGRASAPAEPDSACCMELPAGAGDAVRSPATAAALVSFPGGPGELELALEEE Sbjct: 1 MSAFCLGLAGRASAPAEPDSACCMELPAGAGDAVRSPATAAALVSFPGGPGELELALEEE 60 Query: 61 LALLAAGERSSEPGEHPQAEPESPVEGHGPPLPPPPTQDPELLSVIRQKEKDLVLAARLG 120 LALLAAGERSSEPGEHPQAEPESPVEGHGPPLPPPPTQDPELLSVIRQKEKDLVLAARLG Sbjct: 61 LALLAAGERSSEPGEHPQAEPESPVEGHGPPLPPPPTQDPELLSVIRQKEKDLVLAARLG 120 Query: 121 KALLERNQDMSRQYEQMHKELTDKLEHLEQEKHELRRRFENREGEWEGRVSELETDVKQL 180 KALLERNQDMSRQYEQMHKELTDKLEHLEQEKHELRRRFENREGEWEGRVSELETDVKQL Sbjct: 121 KALLERNQDMSRQYEQMHKELTDKLEHLEQEKHELRRRFENREGEWEGRVSELETDVKQL 180 Query: 181 QDELERQQLHLREADREKTRAVQELSEQNQRLLDQLSRASEVERQLSMQVHALKEDFREK 240 QDELERQQLHLREADREKTRAVQELSEQNQRLLDQLSRASEVERQLSMQVHALKEDFREK Sbjct: 181 QDELERQQLHLREADREKTRAVQELSEQNQRLLDQLSRASEVERQLSMQVHALKEDFREK 240 Query: 241 NSSTNQHIIRLESLQAEIKMLSDRKRELEHRLSATLEENDLLQGTVEELQDRVLILERQG 300 NSSTNQHIIRLESLQAEIKMLSDRKRELEHRLSATLEENDLLQGTVEELQDRVLILERQG Sbjct: 241 NSSTNQHIIRLESLQAEIKMLSDRKRELEHRLSATLEENDLLQGTVEELQDRVLILERQG 300 Query: 301 HDKDLQLHQSQLELQEVRLSYRQLQGKVEELTEERSLQSSAATSTSLLSEIEQSMEAEEL 360 HDKDLQLHQSQLELQEVRLSYRQLQGKVEELTEERSLQSSAATSTSLLSEIEQSMEAEEL Sbjct: 301 HDKDLQLHQSQLELQEVRLSYRQLQGKVEELTEERSLQSSAATSTSLLSEIEQSMEAEEL 360 Query: 361 EQEREQLRLQLWEAYCQVRYLCSHLRGNDSADSAVSTDSSMDESSETSSAKDVPAGSLRT 420 EQEREQLRLQLWEAYCQVRYLCSHLRGNDSADSAVSTDSSMDESSETSSAKDVPAGSLRT Sbjct: 361 EQEREQLRLQLWEAYCQVRYLCSHLRGNDSADSAVSTDSSMDESSETSSAKDVPAGSLRT 420 Query: 421 ALNDLKRLIQSIVDGVEPTVTLLSVEMTALKEERDRLRVTSEDKEPKEQLQKAIRDRDEA 480 ALNDLKRLIQSIVDGVEPTVTLLSVEMTALKEERDRLRVTSEDKEPKEQLQKAIRDRDEA Sbjct: 421 ALNDLKRLIQSIVDGVEPTVTLLSVEMTALKEERDRLRVTSEDKEPKEQLQKAIRDRDEA 480 Query: 481 IAKKNAVELELAKCKMDMMSLNSQLLDAIQQKLNLSQQLEAWQDDMHRVIDRQLMDTHLK 540 IAKKNAVELELAKCKMDMMSLNSQLLDAIQQKLNLSQQLEAWQDDMHRVIDRQLMDTHLK Sbjct: 481 IAKKNAVELELAKCKMDMMSLNSQLLDAIQQKLNLSQQLEAWQDDMHRVIDRQLMDTHLK 540 Query: 541 EQSRPAAAAFPRGHGVGRGQEPSTADGKRLFSFFRKI 577 EQSRPAAAAFPRGHGVGRGQEPSTADGKRLFSFFRKI Sbjct: 541 EQSRPAAAAFPRGHGVGRGQEPSTADGKRLFSFFRKI 577 >4M4Z-A nrPDB Length = 170 Score = 33.9 bits (76), Expect = 0.18, Method: Compositional matrix adjust. Identities = 20/35 (57%), Positives = 24/35 (68%), Gaps = 1/35 (2%) Query: 32 DAVRSPATAAALVSFP-GGPGELELALEEELALLA 65 +A RS ATA AL SFP GGP EL L L E L +++ Sbjct: 6 EAERSKATAVALGSFPAGGPAELSLRLGEPLTIVS 40 >4YTD-A nrPDB Length = 101 Score = 30.4 bits (67), Expect = 2.0, Method: Compositional matrix adjust. Identities = 27/85 (31%), Positives = 46/85 (54%), Gaps = 4/85 (4%) Query: 442 LLSVEMTALKEERDRLRVTSEDKEPKEQLQKAIRDR-DEAIAKKNAVELELAKCKMDMMS 500 +++ MT L R+ L+ ED L+ R DE + + + ++ +LA + + + Sbjct: 12 MVTETMTKL---RNELKALKEDAATFSSLRAMFATRCDEYVTQLDEMQRQLAAAEDEKKT 68 Query: 501 LNSQLLDAIQQKLNLSQQLEAWQDD 525 LN+ L AIQQKL L+Q+LE + D Sbjct: 69 LNTLLRMAIQQKLALTQRLEDLEFD 93 >6FG5-A nrPDB Length = 370 Score = 30.4 bits (67), Expect = 2.1, Method: Compositional matrix adjust. Identities = 30/107 (28%), Positives = 44/107 (41%), Gaps = 17/107 (15%) Query: 285 TVEELQDRVLILERQGHDKDLQLHQSQLELQEVRLSYRQLQGKVEELTEERSLQSSAATS 344 ++ DR+ IL+ H DL L L YR+ G+ L EE Q Sbjct: 256 NLDNYADRIQILQNMIHCADLSNPAKPLRL------YRKWTGR---LIEEFFRQGDKERE 306 Query: 345 TSLLSEIEQSMEAEELEQEREQLRL------QLWEAYCQVRYLCSHL 385 SL EI + E +E E+ Q+ LWE +C + + C+ L Sbjct: 307 LSL--EISPMCDRESVEVEKSQVSFIDFVCHPLWETWCDLVHPCAQL 351 >3ZK8-A nrPDB Length = 278 Score = 29.3 bits (64), Expect = 4.3, Method: Compositional matrix adjust. Identities = 14/42 (33%), Positives = 24/42 (57%) Query: 110 EKDLVLAARLGKALLERNQDMSRQYEQMHKELTDKLEHLEQE 151 E ++ A + K L ++ + YE+ KE TDKL+ L++E Sbjct: 114 ENGIIFAKNIAKQLSAKDPNNKEFYEKNLKEYTDKLDKLDKE 155 >4UTP-A nrPDB Length = 314 Score = 29.3 bits (64), Expect = 4.7, Method: Compositional matrix adjust. Identities = 14/42 (33%), Positives = 24/42 (57%) Query: 110 EKDLVLAARLGKALLERNQDMSRQYEQMHKELTDKLEHLEQE 151 E ++ A + K L ++ + YE+ KE TDKL+ L++E Sbjct: 145 ENGIIFAKNIAKQLSAKDPNNKEFYEKNLKEYTDKLDKLDKE 186 >5JBJ-A nrPDB Length = 680 Score = 29.3 bits (64), Expect = 5.0, Method: Compositional matrix adjust. Identities = 25/70 (35%), Positives = 35/70 (50%), Gaps = 6/70 (8%) Query: 153 HELRRRFENREGEWEGRVSELETDVKQLQDELERQQLHLREADREKTRAVQELSEQNQRL 212 H RR E R G GRV+ L V +Q LE++ LR+A K AV S ++ Sbjct: 42 HVCRRHLEGRRG---GRVAVLVNKVHLVQQHLEKEFHVLRDAF--KVTAVSGDSS-HKCF 95 Query: 213 LDQLSRASEV 222 QL++ S+V Sbjct: 96 FGQLAKGSDV 105 >2H2G-A nrPDB Length = 246 Score = 28.5 bits (62), Expect = 7.8, Method: Compositional matrix adjust. Identities = 19/54 (35%), Positives = 28/54 (51%), Gaps = 2/54 (3%) Query: 265 KRELEHRLSATLEENDLLQGTVEELQDRVLILERQGHDKDLQLHQSQLELQEVR 318 K L H L A LEE L++ + + DR + +R G K ++LH + E VR Sbjct: 75 KPNLAHVLLAKLEEKGLIEAVITQNIDR--LHQRAGSKKVIELHGNVEEYYCVR 126 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: 6F1U-X nrPDB 1009 0.0 Sequences not found previously or not previously below threshold: 4RM9-A nrPDB 41 0.001 2I1J-A nrPDB 40 0.003 4M4Z-A nrPDB 38 0.009 6FG5-A nrPDB 36 0.052 2QAG-C nrPDB 36 0.054 2V71-A nrPDB 36 0.058 3JAX-A nrPDB 35 0.088 5YZ0-C nrPDB 35 0.095 4P02-A nrPDB 35 0.096 3JB9-S nrPDB 35 0.10 5W3D-A nrPDB 35 0.12 1IYJ-B nrPDB 35 0.12 1CII-A nrPDB 34 0.14 6ID1-L nrPDB 34 0.16 5LN3-Z nrPDB 34 0.19 4X3N-A nrPDB 33 0.30 4YTD-A nrPDB 33 0.31 1SJJ-A nrPDB 33 0.34 5AMO-A nrPDB 33 0.36 6HIX-Ag nrPDB 33 0.38 5TKY-A nrPDB 33 0.40 6NWP-A nrPDB 33 0.43 5WLQ-A nrPDB 33 0.47 4YDH-A nrPDB 32 0.54 3MPX-A nrPDB 32 0.54 5M6U-B nrPDB 32 0.68 5XW2-A nrPDB 32 0.70 5ZSN-B nrPDB 32 0.87 4TKO-B nrPDB 32 1.0 5VY8-A nrPDB 31 1.1 4UTP-A nrPDB 31 1.2 3ZK8-A nrPDB 31 1.2 5MRE-R nrPDB 31 1.6 4N78-D nrPDB 31 1.8 5WLC-SM nrPDB 31 1.8 5CWS-E nrPDB 30 1.8 3FHN-A nrPDB 30 2.6 6CW5-A nrPDB 30 2.8 5EIX-A nrPDB 30 3.1 3N3Y-A nrPDB 30 3.1 3R6N-A nrPDB 30 3.3 3P8C-D nrPDB 30 3.6 4L3I-A nrPDB 30 3.9 4BL6-A nrPDB 29 4.5 5D4W-A nrPDB 29 5.3 4YC7-B nrPDB 29 5.4 4XA3-A nrPDB 29 7.7 4FZS-A nrPDB 29 8.4 5DFZ-D nrPDB 29 8.6 5NGM-Al nrPDB 28 9.6 >6F1U-X nrPDB Length = 577 Score = 1009 bits (2608), Expect = 0.0, Method: Composition-based stats. Identities = 577/577 (100%), Positives = 577/577 (100%) Query: 1 MSAFCLGLAGRASAPAEPDSACCMELPAGAGDAVRSPATAAALVSFPGGPGELELALEEE 60 MSAFCLGLAGRASAPAEPDSACCMELPAGAGDAVRSPATAAALVSFPGGPGELELALEEE Sbjct: 1 MSAFCLGLAGRASAPAEPDSACCMELPAGAGDAVRSPATAAALVSFPGGPGELELALEEE 60 Query: 61 LALLAAGERSSEPGEHPQAEPESPVEGHGPPLPPPPTQDPELLSVIRQKEKDLVLAARLG 120 LALLAAGERSSEPGEHPQAEPESPVEGHGPPLPPPPTQDPELLSVIRQKEKDLVLAARLG Sbjct: 61 LALLAAGERSSEPGEHPQAEPESPVEGHGPPLPPPPTQDPELLSVIRQKEKDLVLAARLG 120 Query: 121 KALLERNQDMSRQYEQMHKELTDKLEHLEQEKHELRRRFENREGEWEGRVSELETDVKQL 180 KALLERNQDMSRQYEQMHKELTDKLEHLEQEKHELRRRFENREGEWEGRVSELETDVKQL Sbjct: 121 KALLERNQDMSRQYEQMHKELTDKLEHLEQEKHELRRRFENREGEWEGRVSELETDVKQL 180 Query: 181 QDELERQQLHLREADREKTRAVQELSEQNQRLLDQLSRASEVERQLSMQVHALKEDFREK 240 QDELERQQLHLREADREKTRAVQELSEQNQRLLDQLSRASEVERQLSMQVHALKEDFREK Sbjct: 181 QDELERQQLHLREADREKTRAVQELSEQNQRLLDQLSRASEVERQLSMQVHALKEDFREK 240 Query: 241 NSSTNQHIIRLESLQAEIKMLSDRKRELEHRLSATLEENDLLQGTVEELQDRVLILERQG 300 NSSTNQHIIRLESLQAEIKMLSDRKRELEHRLSATLEENDLLQGTVEELQDRVLILERQG Sbjct: 241 NSSTNQHIIRLESLQAEIKMLSDRKRELEHRLSATLEENDLLQGTVEELQDRVLILERQG 300 Query: 301 HDKDLQLHQSQLELQEVRLSYRQLQGKVEELTEERSLQSSAATSTSLLSEIEQSMEAEEL 360 HDKDLQLHQSQLELQEVRLSYRQLQGKVEELTEERSLQSSAATSTSLLSEIEQSMEAEEL Sbjct: 301 HDKDLQLHQSQLELQEVRLSYRQLQGKVEELTEERSLQSSAATSTSLLSEIEQSMEAEEL 360 Query: 361 EQEREQLRLQLWEAYCQVRYLCSHLRGNDSADSAVSTDSSMDESSETSSAKDVPAGSLRT 420 EQEREQLRLQLWEAYCQVRYLCSHLRGNDSADSAVSTDSSMDESSETSSAKDVPAGSLRT Sbjct: 361 EQEREQLRLQLWEAYCQVRYLCSHLRGNDSADSAVSTDSSMDESSETSSAKDVPAGSLRT 420 Query: 421 ALNDLKRLIQSIVDGVEPTVTLLSVEMTALKEERDRLRVTSEDKEPKEQLQKAIRDRDEA 480 ALNDLKRLIQSIVDGVEPTVTLLSVEMTALKEERDRLRVTSEDKEPKEQLQKAIRDRDEA Sbjct: 421 ALNDLKRLIQSIVDGVEPTVTLLSVEMTALKEERDRLRVTSEDKEPKEQLQKAIRDRDEA 480 Query: 481 IAKKNAVELELAKCKMDMMSLNSQLLDAIQQKLNLSQQLEAWQDDMHRVIDRQLMDTHLK 540 IAKKNAVELELAKCKMDMMSLNSQLLDAIQQKLNLSQQLEAWQDDMHRVIDRQLMDTHLK Sbjct: 481 IAKKNAVELELAKCKMDMMSLNSQLLDAIQQKLNLSQQLEAWQDDMHRVIDRQLMDTHLK 540 Query: 541 EQSRPAAAAFPRGHGVGRGQEPSTADGKRLFSFFRKI 577 EQSRPAAAAFPRGHGVGRGQEPSTADGKRLFSFFRKI Sbjct: 541 EQSRPAAAAFPRGHGVGRGQEPSTADGKRLFSFFRKI 577 >4RM9-A nrPDB Length = 587 Score = 41.3 bits (95), Expect = 0.001, Method: Composition-based stats. Identities = 35/143 (24%), Positives = 65/143 (45%), Gaps = 9/143 (6%) Query: 181 QDELERQQLHLRE-----ADREKTRAVQELSEQNQRLLDQLSRASEVERQLSMQVHALKE 235 Q +LERQQL + +REK + ++E E RL D + + ER+LS Q+ + Sbjct: 316 QKQLERQQLETEKKRRETVEREKEQMMREKEELMLRLQDYEEKTKKAERELSEQIQRALQ 375 Query: 236 DFREKNSSTNQHIIRLESLQAEIKMLSDRKRELEHRLSATLEENDLLQGTVEELQDRVLI 295 E+ + + E L+A+ K ELE + ++ + L + E ++ + Sbjct: 376 LEEERKRAQEE----AERLEADRMAALRAKEELERQAVDQIKSQEQLAAELAEYTAKIAL 431 Query: 296 LERQGHDKDLQLHQSQLELQEVR 318 LE K+ ++ + Q +E + Sbjct: 432 LEEARRRKEDEVEEWQHRAKEAQ 454 Score = 35.1 bits (79), Expect = 0.079, Method: Composition-based stats. Identities = 44/175 (25%), Positives = 73/175 (41%), Gaps = 34/175 (19%) Query: 110 EKDLVLAARLGKALLERNQDMSRQYEQMHKEL---TDKLEHLEQEKHELRRRFENREGEW 166 E D + A R + L + D + EQ+ EL T K+ LE E RRR E+ EW Sbjct: 391 EADRMAALRAKEELERQAVDQIKSQEQLAAELAEYTAKIALLE----EARRRKEDEVEEW 446 Query: 167 EGRVSELETDVKQLQDELE-------------------RQQLHLREADREKTRAVQELSE 207 + R E + D+ + ++EL Q L++ E T ELS Sbjct: 447 QHRAKEAQDDLVKTKEELHLVMTAPPPPPPPVYEPVSYHVQESLQDEGAEPTGYSAELSS 506 Query: 208 Q-------NQRLLDQLSRASEVERQLSMQVHALKEDFREKNSSTNQHIIRLESLQ 255 + ++ + + + V+RQL L + R++N T+ II E+++ Sbjct: 507 EGIRDDRNEEKRITEAEKNERVQRQLLTLSSELSQA-RDENKRTHNDIIHNENMR 560 Score = 32.4 bits (72), Expect = 0.60, Method: Composition-based stats. Identities = 30/165 (18%), Positives = 73/165 (44%), Gaps = 12/165 (7%) Query: 106 IRQKEKDLVLAARLGKALLERNQDMSRQYEQMHKE------LTDKLEHLEQEKHELRRRF 159 +R+++ D + ++ E + +Q+ E + + E + +EK EL R Sbjct: 293 MRRRKPDTIEVQQMKAQAREEKHQKQLERQQLETEKKRRETVEREKEQMMREKEELMLRL 352 Query: 160 ENREGEWEGRVSELETDVK---QLQDELERQQLHLREADREKTRAVQELSEQNQRLLDQL 216 ++ E + + EL ++ QL++E +R Q + ++ A++ E ++ +DQ+ Sbjct: 353 QDYEEKTKKAERELSEQIQRALQLEEERKRAQEEAERLEADRMAALRAKEELERQAVDQI 412 Query: 217 SRASEVERQL---SMQVHALKEDFREKNSSTNQHIIRLESLQAEI 258 ++ +L + ++ L+E R K + R + Q ++ Sbjct: 413 KSQEQLAAELAEYTAKIALLEEARRRKEDEVEEWQHRAKEAQDDL 457 >2I1J-A nrPDB Length = 575 Score = 39.7 bits (91), Expect = 0.003, Method: Composition-based stats. Identities = 35/164 (21%), Positives = 71/164 (43%), Gaps = 26/164 (15%) Query: 129 DMSRQYEQMHKELTDKLEHLEQEKHEL--RRRFENREGEWEGRVSELETDVKQLQDELER 186 D+ + Q +E K E+ + E+ R R E ++ E++ R+ +Q+Q+E+ER Sbjct: 301 DVQQMKAQAREEKLAKQAQREKLQLEIAARERAEKKQQEYQDRL-------RQMQEEMER 353 Query: 187 QQLHLREAD----------REKTRAVQELSEQNQRLLDQLSRASEVERQLSMQVHALKED 236 Q +L EA R+ A +EL ++ L + R E + + + L+++ Sbjct: 354 SQANLLEAQDMILRLEEQLRQLQAAKEELEQRQNELQAMMQRLEETKNMEAAERQKLEDE 413 Query: 237 FREKNSSTNQHIIRLESLQAEIKMLSDRKRELEHRLSATLEEND 280 R K ++ +Q E+++ R L+ + + D Sbjct: 414 IRAKQEEVSR-------IQQEVELKDSETRRLQEEVEDARRKQD 450 Score = 30.9 bits (68), Expect = 1.6, Method: Composition-based stats. Identities = 35/144 (24%), Positives = 62/144 (43%), Gaps = 29/144 (20%) Query: 227 SMQVHALKEDFREKNSSTNQHIIRLESLQAEIKMLSDRKRELEHRLSATLEENDLLQGTV 286 ++ V +K RE+ + +L+ A + +++E + RL EE + Q + Sbjct: 299 TIDVQQMKAQAREEKLAKQAQREKLQLEIAARERAEKKQQEYQDRLRQMQEEMERSQANL 358 Query: 287 EELQDRVLILERQGHDKDLQLHQSQLELQEVRLSYRQLQGKVEELTEERSLQSSAATSTS 346 E QD +L LE Q RQLQ EEL E+R + A Sbjct: 359 LEAQDMILRLEEQ---------------------LRQLQAAKEEL-EQRQNELQA----- 391 Query: 347 LLSEIEQS--MEAEELEQEREQLR 368 ++ +E++ MEA E ++ +++R Sbjct: 392 MMQRLEETKNMEAAERQKLEDEIR 415 >4M4Z-A nrPDB Length = 170 Score = 38.2 bits (87), Expect = 0.009, Method: Composition-based stats. Identities = 21/39 (53%), Positives = 25/39 (64%), Gaps = 1/39 (2%) Query: 28 AGAGDAVRSPATAAALVSFP-GGPGELELALEEELALLA 65 A +A RS ATA AL SFP GGP EL L L E L +++ Sbjct: 2 AMGSEAERSKATAVALGSFPAGGPAELSLRLGEPLTIVS 40 >6FG5-A nrPDB Length = 370 Score = 35.9 bits (81), Expect = 0.052, Method: Composition-based stats. Identities = 30/106 (28%), Positives = 44/106 (41%), Gaps = 17/106 (16%) Query: 286 VEELQDRVLILERQGHDKDLQLHQSQLELQEVRLSYRQLQGKVEELTEERSLQSSAATST 345 ++ DR+ IL+ H DL L L YR+ G+ L EE Q Sbjct: 257 LDNYADRIQILQNMIHCADLSNPAKPLRL------YRKWTGR---LIEEFFRQGDKEREL 307 Query: 346 SLLSEIEQSMEAEELEQEREQLRL------QLWEAYCQVRYLCSHL 385 SL EI + E +E E+ Q+ LWE +C + + C+ L Sbjct: 308 SL--EISPMCDRESVEVEKSQVSFIDFVCHPLWETWCDLVHPCAQL 351 >2QAG-C nrPDB Length = 418 Score = 35.9 bits (81), Expect = 0.054, Method: Composition-based stats. Identities = 16/71 (22%), Positives = 38/71 (53%), Gaps = 2/71 (2%) Query: 121 KALLERNQDMSRQYEQMHKELTDKLEHLEQEKHELRRRFENREGEWEG--RVSELETDVK 178 K +++ +D + ++ H+++ LE +E E RR+FE+ + WE R+ E + + Sbjct: 347 KEKVQKLKDSEAELQRRHEQMKKNLEAQHKELEEKRRQFEDEKANWEAQQRILEQQNSSR 406 Query: 179 QLQDELERQQL 189 L+ ++ ++ Sbjct: 407 TLEKNKKKGKI 417 Score = 34.3 bits (77), Expect = 0.15, Method: Composition-based stats. Identities = 19/63 (30%), Positives = 34/63 (53%), Gaps = 3/63 (4%) Query: 140 ELTDKLEHLEQEKHELRRRFENREGEWEGRVSELETDVKQLQDE---LERQQLHLREADR 196 ++ +K++ L+ + EL+RR E + E + ELE +Q +DE E QQ L + + Sbjct: 345 KVKEKVQKLKDSEAELQRRHEQMKKNLEAQHKELEEKRRQFEDEKANWEAQQRILEQQNS 404 Query: 197 EKT 199 +T Sbjct: 405 SRT 407 >2V71-A nrPDB Length = 189 Score = 35.5 bits (80), Expect = 0.058, Method: Composition-based stats. Identities = 42/166 (25%), Positives = 79/166 (47%), Gaps = 23/166 (13%) Query: 128 QDMSRQYEQMHKELTDKLEHLEQEKHELRRRFENREGEWEGRVSELETDVKQLQDELER- 186 +++S +Y+Q +E D+L ++ EL E + + E R +L+ D ++L+ E+E Sbjct: 16 KELSMKYKQSFQEARDELVEFQEGSRELEAELEAQLVQAEQRNRDLQADNQRLKYEVEAL 75 Query: 187 ------------QQLHLREADREKTRAVQELSEQNQRLLDQLSRASEVERQLSMQVHALK 234 +Q+ + E D +TRA++E + R L+Q + ++ER + +L Sbjct: 76 KEKLEHQYAQSYKQVSVLEDDLSQTRAIKEQLHKYVRELEQAN--DDLERAKRATIMSL- 132 Query: 235 EDFR-------EKNSSTNQHIIRLESLQAEIKMLSDRKRELEHRLS 273 EDF E+N+ + ESL ++ L D R+L L+ Sbjct: 133 EDFEQRLNQAIERNAFLESELDEKESLLVSVQRLKDEARDLRQELA 178 >3JAX-A nrPDB Length = 974 Score = 35.1 bits (79), Expect = 0.088, Method: Composition-based stats. Identities = 33/122 (27%), Positives = 59/122 (48%), Gaps = 22/122 (18%) Query: 125 ERNQDMSRQYEQMHKELTDKLEHLEQEKHELRRRFENREGEWEGRVSELETDVKQLQDEL 184 ER ++M+ M +E T E LE K E RR+ E E ++ L + LQ ++ Sbjct: 855 EREKEMA----SMKEEFTRLKEALE--KSEARRK------ELEEKMVSLLQEKNDLQLQV 902 Query: 185 ERQQLHLREAD-------REKTRAVQELSEQNQRLLDQLSRASEV---ERQLSMQVHALK 234 + +Q +L +A+ + K + ++ E N+RL D+ +E+ +R+L + LK Sbjct: 903 QAEQDNLADAEERCDQLIKNKIQLEAKVKEMNERLEDEEEMNAELTAKKRKLEDECSELK 962 Query: 235 ED 236 D Sbjct: 963 RD 964 Score = 34.7 bits (78), Expect = 0.099, Method: Composition-based stats. Identities = 32/128 (25%), Positives = 57/128 (44%), Gaps = 10/128 (7%) Query: 162 REGEWEGRVSELETDVKQLQDELERQQLHLREADREKTRAVQE---LSEQNQRLLDQLSR 218 + E E ++ ++ + +L++ LE+ + +E + + +QE L Q Q D L+ Sbjct: 852 QSAEREKEMASMKEEFTRLKEALEKSEARRKELEEKMVSLLQEKNDLQLQVQAEQDNLAD 911 Query: 219 ASEVERQLSMQVHALKEDFREKNSSTNQHIIRLESLQAEIKMLSDRKRELEHRLSATLEE 278 A E QL L+ +E N RLE + L+ +KR+LE S + Sbjct: 912 AEERCDQLIKNKIQLEAKVKEMNE-------RLEDEEEMNAELTAKKRKLEDECSELKRD 964 Query: 279 NDLLQGTV 286 D L+ T+ Sbjct: 965 IDDLELTL 972 Score = 33.6 bits (75), Expect = 0.28, Method: Composition-based stats. Identities = 38/143 (26%), Positives = 71/143 (49%), Gaps = 25/143 (17%) Query: 233 LKEDFREKN-SSTNQHIIRL-ESLQAEIKMLSDRKRELEHRLSATLEENDLLQGTVEELQ 290 L+ REK +S + RL E+L+ R++ELE ++ + L+E + LQ V+ Q Sbjct: 851 LQSAEREKEMASMKEEFTRLKEALEKS----EARRKELEEKMVSLLQEKNDLQLQVQAEQ 906 Query: 291 DRVLILERQGHDKDLQLHQSQLELQEVRLSYRQLQGKVEELTEERSLQSSAATSTSLLSE 350 D + E + QL ++++ QL+ KV+E+ E L+ + L ++ Sbjct: 907 DNLADAEERCD----QLIKNKI----------QLEAKVKEMNER--LEDEEEMNAELTAK 950 Query: 351 IEQSMEAE--ELEQEREQLRLQL 371 ++ +E E EL+++ + L L L Sbjct: 951 -KRKLEDECSELKRDIDDLELTL 972 >5YZ0-C nrPDB Length = 791 Score = 35.1 bits (79), Expect = 0.095, Method: Composition-based stats. Identities = 41/171 (23%), Positives = 75/171 (43%), Gaps = 30/171 (17%) Query: 204 ELSEQNQRLLDQLSRASEVERQLSM--QVHALKEDFREKNSSTNQHII------RLESLQ 255 +L E + LS+ R +S +VH L + + S N+ + LE LQ Sbjct: 59 DLEELDTLASQALSQCPAAARDVSSDHKVHRLLDGMSKNPSGKNRETVPIKDNFELEVLQ 118 Query: 256 AEIKMLSDRKRELE-----------------HRLSATLEENDLLQGTVEELQDRVLILER 298 A+ K L ++ + +E H+ + LEE +E+ + + L + Sbjct: 119 AQYKELKEKMKVMEEEVLIKNGEIKILRDSLHQTESVLEEQRRSHFLLEQEKTQALSDKE 178 Query: 299 QGHDKDLQLHQSQLELQEVRLSYRQLQGKVEELTEERSLQSSAATSTSLLS 349 + K LQ QS+L+ ++ ++ +L+ K++ T ER+ AA S S +S Sbjct: 179 KEFSKKLQSLQSELQFKDAEMN--ELRTKLQ--TSERA-NKLAAPSVSHVS 224 >4P02-A nrPDB Length = 803 Score = 35.1 bits (79), Expect = 0.096, Method: Composition-based stats. Identities = 28/123 (22%), Positives = 52/123 (42%), Gaps = 5/123 (4%) Query: 67 GERSSEPGEHPQAEPESPVEGHGPPLPPPPTQDP-ELLSVIRQKEKDLVLAARLGKALLE 125 G S++P + P P P E + P +P ++LSV K+++ ARL +L Sbjct: 120 GFLSADPTDRPFPRPLQPEELPTVDILVPSYNEPADMLSVTLAAAKNMIYPARLRTVVLC 179 Query: 126 RNQDMSRQYEQMHKELTDKLEHLEQEKHELRRR----FENREGEWEGRVSELETDVKQLQ 181 + ++ EL K + +E +L R + RE + + +++L+ Sbjct: 180 DDGGTDQRCMSPDPELAQKAQERRRELQQLCRELGVVYSTRERNEHAKAGNMSAALERLK 239 Query: 182 DEL 184 EL Sbjct: 240 GEL 242 >3JB9-S nrPDB Length = 488 Score = 34.7 bits (78), Expect = 0.10, Method: Composition-based stats. Identities = 40/153 (26%), Positives = 67/153 (43%), Gaps = 20/153 (13%) Query: 72 EPGEHPQAEPESPVEGHGP--------PLPPPPTQDPELLSVIRQKEKDLVLAA-RLGKA 122 E + P + E +E P P PP T P LLS+ +++ + L L + Sbjct: 34 ETSKDPVTQQECTLEDLVPVKVPDFVRPRPPSATSLPALLSLFQEEWDSVALEQFELRRN 93 Query: 123 LLERNQDMSRQYEQMHKELTDKLEHLEQEKHELRR---RFENREGEWEGRVSEL-ETDVK 178 L E Q++S + L + L +E+ E R +F + G + E+ E ++ Sbjct: 94 LTETKQELSTALYSLDAALR-VISRLTKERDEAREALAKFSDNIGTVSSKTIEVQEVEMG 152 Query: 179 QLQDELERQQLHLREADREKTRAVQELSEQNQR 211 + D+L+ LR + EKT QELS + +R Sbjct: 153 ESDDQLKTS---LR-STVEKT--FQELSSKRKR 179 >5W3D-A nrPDB Length = 412 Score = 34.7 bits (78), Expect = 0.12, Method: Composition-based stats. Identities = 21/55 (38%), Positives = 30/55 (54%), Gaps = 8/55 (14%) Query: 137 MHKELTDKLEHLEQEKHELRRRFENREGEWEGRVSELETDVKQL-QDELERQQLH 190 MH L+ ++ HL Q EL R E + +ELET +QL Q +ER++LH Sbjct: 4 MHAALSTEVVHLRQRTEELLRCNEQ-------QAAELETCKEQLFQSNMERKELH 51 >1IYJ-B nrPDB Length = 817 Score = 34.7 bits (78), Expect = 0.12, Method: Composition-based stats. Identities = 47/202 (23%), Positives = 88/202 (43%), Gaps = 19/202 (9%) Query: 149 EQEKHELRRRFENREGEWEGRVSELETDVKQLQDE----------LERQQLHLREADREK 198 E+EK LR E ++ + E +++ T++K+ +++ L RQQ+H + E Sbjct: 442 EEEKEALRFA-EAQQKKLEALFTKVHTELKEHEEDIAQRRVLSRALTRQQVHALQDGAEL 500 Query: 199 TRAVQELSEQNQRLL----DQLSRASEVERQLSMQVHA-LKEDFRE--KNSSTNQHIIRL 251 AVQ+ S+ +QL + + LS + A ++ +FR+ + + + + R Sbjct: 501 YAAVQDASDPEHLETCFSEEQLRALNNYRQMLSDKKQARIQSEFRKALEAAEKEEGLSRD 560 Query: 252 ESLQAEIKMLSDRKRELEHRLSATLEENDLLQGTVEELQDRVLILERQGHDKDLQLHQSQ 311 S ++++ S +KRE LS +DL E + R+ L + Q Sbjct: 561 VSTVWKLRVTSYKKREKSALLSIWRPSSDLPSLLTEGQRYRIYHLSVSKSKNKFEWPSIQ 620 Query: 312 LELQEVRLSYRQLQGKVEELTE 333 L + R Y+QL E L + Sbjct: 621 LTATK-RTQYQQLPVSSETLLQ 641 >1CII-A nrPDB Length = 602 Score = 34.3 bits (77), Expect = 0.14, Method: Composition-based stats. Identities = 28/121 (23%), Positives = 52/121 (42%), Gaps = 15/121 (12%) Query: 113 LVLAARLGKALLERNQDMSRQYEQMHKELTDKLEHLEQEKHELRRRFENREGEWEGRVSE 172 L ++ R ++L+E+ + + + K+ D L +E R+G + R+SE Sbjct: 150 LRISPREARSLIEQAEKRQKDAQNADKKAADMLAE-----------YERRKGILDTRLSE 198 Query: 173 LETDVKQLQDELERQQLHLREADREKTRAVQELSEQNQRLLDQLSRA----SEVERQLSM 228 LE + L+ QQ L RA+ E + + + L+ A + E+QL+ Sbjct: 199 LEKNGGAALAVLDAQQARLLGQQTRNDRAISEARNKLSSVTESLNTARNALTRAEQQLTQ 258 Query: 229 Q 229 Q Sbjct: 259 Q 259 >6ID1-L nrPDB Length = 802 Score = 34.3 bits (77), Expect = 0.16, Method: Composition-based stats. Identities = 36/180 (20%), Positives = 81/180 (45%), Gaps = 11/180 (6%) Query: 106 IRQKEKDLVLAARLGKALLERNQDMSRQYEQMHKELTDKLEHLEQEKHELRRRFENREGE 165 +++ + LV + K + + S Y Q+ +E ++ +L + R +++ Sbjct: 629 LKKAQDVLVQEMEVVKQGMSHGELSSEAYNQVWEECYSQVLYLPGQSRYTRANLASKKDR 688 Query: 166 WEGRVSELETDVKQLQDELERQQLHLREADREKTRAVQELSEQNQR--LLDQLSRASEVE 223 E LE + + E +R A EK + Q++ L+ QL+ + Sbjct: 689 IESLEKRLEINRGHMTTEAKRA------AKMEKKMKILLGGYQSRAMGLMKQLNDLWDQI 742 Query: 224 RQLSMQVHALKEDFREKNSSTNQHIIRLESLQAEIKMLSDRKRELEHRLSATLEENDLLQ 283 Q +++ +E + ++S+ + RLE L+ +++ +R++EL+HR + L E + L+ Sbjct: 743 EQAHLELRTFEELKKHEDSAIPR---RLECLKEDVQRQQEREKELQHRYADLLLEKETLK 799 >5LN3-Z nrPDB Length = 908 Score = 34.0 bits (76), Expect = 0.19, Method: Composition-based stats. Identities = 33/121 (27%), Positives = 53/121 (43%), Gaps = 4/121 (3%) Query: 160 ENREGEWEGRVSELETDVKQLQDELERQQLHLREADREKTR-AVQELSEQNQRLLDQLSR 218 E R+ + + EL + KQLQDELE L E D R A++EL Q + ++ Sbjct: 32 ERRDAGDKDKEQELSEEDKQLQDELEMLVERLGEKDTSLYRPALEELRRQIRSSTTSMTS 91 Query: 219 ASEVERQLSMQVHALKEDFREKNSSTNQHIIRLESLQAEIKMLSDRKRE-LEHRLSATLE 277 + + L LKE + N+ + + + M +RE L++RL + E Sbjct: 92 VPKPLKFLRPHYGKLKEIYENMAPGENKRFA--ADIISVLAMTMSGERECLKYRLVGSQE 149 Query: 278 E 278 E Sbjct: 150 E 150 >4X3N-A nrPDB Length = 295 Score = 33.2 bits (74), Expect = 0.30, Method: Composition-based stats. Identities = 35/151 (23%), Positives = 64/151 (42%), Gaps = 18/151 (11%) Query: 235 EDFREKNSSTNQHIIRLESLQAEIKMLSDRKRELEHRLSATLEEN-DLLQGTVEELQDRV 293 ED + KN +T I + + L A RK+EL ++ + L+ + + +D Sbjct: 111 EDPKNKNYATTYPISQPQMLTA-----LKRKQELREKVDVNFDGRVSFLEYLLYQYKDFA 165 Query: 294 ----LILERQGHDKDLQLHQSQLELQEVRLSYRQLQGKVEELTEERSLQS-SAATSTSLL 348 HD+ ++ +++L L+EV R + + LTEE + +T++L Sbjct: 166 NPADFCTRSMNHDEHPEIKKARLALEEVNKRIRAYEEEKARLTEESKIPGVKGLGATNML 225 Query: 349 SEIEQSMEAEELEQEREQLRLQLWEAYCQVR 379 ++I+ +EQL L A VR Sbjct: 226 AQIDSG-------PLKEQLNFALISAEAAVR 249 >4YTD-A nrPDB Length = 101 Score = 33.2 bits (74), Expect = 0.31, Method: Composition-based stats. Identities = 24/73 (32%), Positives = 40/73 (54%), Gaps = 1/73 (1%) Query: 454 RDRLRVTSEDKEPKEQLQKAIRDR-DEAIAKKNAVELELAKCKMDMMSLNSQLLDAIQQK 512 R+ L+ ED L+ R DE + + + ++ +LA + + +LN+ L AIQQK Sbjct: 21 RNELKALKEDAATFSSLRAMFATRCDEYVTQLDEMQRQLAAAEDEKKTLNTLLRMAIQQK 80 Query: 513 LNLSQQLEAWQDD 525 L L+Q+LE + D Sbjct: 81 LALTQRLEDLEFD 93 >1SJJ-A nrPDB Length = 863 Score = 33.2 bits (74), Expect = 0.34, Method: Composition-based stats. Identities = 25/109 (22%), Positives = 52/109 (47%), Gaps = 16/109 (14%) Query: 119 LGKALLERNQDMSRQYEQMHKELTDKLEHLEQEKHELRRRFENREGEWEGRVSELETDVK 178 +G + + +++ R +MH L D+L HL R++E ++ ++ +LE D + Sbjct: 618 IGPWIQTKMEEIGRISIEMHGTLEDQLNHL--------RQYEKSIVNYKPKIDQLEGDHQ 669 Query: 179 QLQDELERQQLHLREADREKTRAVQELSEQNQRLLDQLSRA-SEVERQL 226 Q+Q+ L H ++ + ++LL ++R +EVE Q+ Sbjct: 670 QIQEALIFDNKH-------TNYTMEHIRVGWEQLLTTIARTINEVENQI 711 >5AMO-A nrPDB Length = 471 Score = 33.2 bits (74), Expect = 0.36, Method: Composition-based stats. Identities = 39/167 (23%), Positives = 74/167 (44%), Gaps = 32/167 (19%) Query: 161 NREGEWEGRVSELETDVKQLQDELERQQ-LHLREADREKTR----AVQELSEQNQRLLDQ 215 N E W+ S +++ + + + QQ + R+A ++ R VQ +S+ + L + Sbjct: 39 NPEESWQVYSSAQDSEGRCICTVVAPQQTMCSRDARTKQLRQLLEKVQNMSQSIEVLDRR 98 Query: 216 LSRASEVERQLSMQVHALKEDFREKNSSTNQHIIR------------------LESLQAE 257 R + ++ Q+ L+ F++ S QH+ R LE +A+ Sbjct: 99 TQRDLQYVEKMENQMKGLETKFKQVEESHKQHLARQFKAIKAKMDELRPLIPVLEEYKAD 158 Query: 258 IKMLSDRKRELEHRLSATLEENDLLQGTV-----EELQDRVLILERQ 299 K++ K E+++ L++ L E LQ + +ELQ RV LE + Sbjct: 159 AKLVLQFKEEVQN-LTSVLNE---LQEEIGAYDYDELQSRVSNLEER 201 Score = 32.4 bits (72), Expect = 0.50, Method: Composition-based stats. Identities = 23/104 (22%), Positives = 51/104 (49%), Gaps = 4/104 (3%) Query: 121 KALLERNQDMSRQYEQMHKELTDKLEHLEQEKHELR---RRFENREGEWEGRVSELETDV 177 + LLE+ Q+MS+ E + + L+++E+ +++++ +F+ E + ++ + Sbjct: 79 RQLLEKVQNMSQSIEVLDRRTQRDLQYVEKMENQMKGLETKFKQVEESHKQHLARQFKAI 138 Query: 178 KQLQDELERQQLHLREADREKTRAVQELSEQNQRLLDQLSRASE 221 K DEL R + + E + + V + E+ Q L L+ E Sbjct: 139 KAKMDEL-RPLIPVLEEYKADAKLVLQFKEEVQNLTSVLNELQE 181 >6HIX-Ag nrPDB Length = 260 Score = 32.8 bits (73), Expect = 0.38, Method: Composition-based stats. Identities = 22/64 (34%), Positives = 31/64 (48%), Gaps = 12/64 (18%) Query: 146 EHLEQEKHELRRRFENREGEWEGRVSELETDVKQLQDELERQQLHLREADR-----EKTR 200 E E + RR+ E EW+ V + +KQ +DE++R R ADR + TR Sbjct: 123 ERRRTEAPQWRRKLS--EKEWDYYVGQYSAQMKQEEDEIQR-----RVADRTCVQEQSTR 175 Query: 201 AVQE 204 VQE Sbjct: 176 EVQE 179 >5TKY-A nrPDB Length = 621 Score = 32.8 bits (73), Expect = 0.40, Method: Composition-based stats. Identities = 27/135 (20%), Positives = 67/135 (49%), Gaps = 3/135 (2%) Query: 91 PLPPPPTQDPELLSVIRQKEKDLVLAARLGKALLERNQDMSRQYEQMHKELTDKLEHLEQ 150 P+PP +P +L V+ + + + +L + R+ +++ + K TD++E + Sbjct: 475 PIPPMKAGEP-VLEVVFEVDVNGILKVTATEKTSGRSANITIA-NSVGKLSTDEIEKMIS 532 Query: 151 EKHELRRRFENREGEWEGRVSELETDVKQLQDELERQQLHLREADREKTRAVQELSEQNQ 210 + + + + E +E + +LE+ + ++++ + L L+ +K + Q LSE Sbjct: 533 DAEKFKSKCEAFSKRFEAK-QQLESYISRVEEIISDPTLSLKLKRGQKDKIEQALSEAMA 591 Query: 211 RLLDQLSRASEVERQ 225 +L + S A E++++ Sbjct: 592 QLEIEDSTADELKKK 606 >6NWP-A nrPDB Length = 441 Score = 32.8 bits (73), Expect = 0.43, Method: Composition-based stats. Identities = 18/49 (36%), Positives = 27/49 (55%), Gaps = 8/49 (16%) Query: 66 AGERS--SEPGEHPQAEPESP-VEGHGPPLPPPPTQDPELLSVIRQKEK 111 +G+RS S PG P +P P LP PPT++P+ ++V+R K Sbjct: 191 SGDRSGYSSPGS-----PGTPGSRSRTPSLPTPPTREPKKVAVVRTPPK 234 >5WLQ-A nrPDB Length = 180 Score = 32.8 bits (73), Expect = 0.47, Method: Composition-based stats. Identities = 34/138 (24%), Positives = 61/138 (44%), Gaps = 14/138 (10%) Query: 207 EQNQRLLDQL-------SRASEVERQLSMQVHALKEDFREKNSSTNQHIIRLESLQAEIK 259 E+++ +L++L S +E +QL + + ++ + N LE L+A ++ Sbjct: 9 EEHEDILNKLLDPELAQSERTEALQQLRVNYGSFVSEYNDLTKRNNLLQAELEELRAVVE 68 Query: 260 MLSDRKRELEHRLSATLEENDLLQGTVEELQDRVLILERQGHDKDLQLHQSQLELQEVRL 319 ++ E L T E LL Q+ LI +++ D DL Q Q E++E Sbjct: 69 QTERSRKLAEQELIETSERVQLLHS-----QNTSLINQKKKMDADLS--QLQTEVEEAVQ 121 Query: 320 SYRQLQGKVEELTEERSL 337 R + K E+L +ER Sbjct: 122 ECRNAEEKAEDLEKERDF 139 >4YDH-A nrPDB Length = 433 Score = 32.4 bits (72), Expect = 0.54, Method: Composition-based stats. Identities = 20/58 (34%), Positives = 30/58 (51%), Gaps = 7/58 (12%) Query: 145 LEHLEQEKHE---LRRRFENREGEWEGRVSELETDVKQLQDELERQQLHLREADREKT 199 LEH+E+ + + L R + E E +++ELE + Q + ELE LRE E T Sbjct: 373 LEHMEELQEQVALLTERLRDAENESMAKIAELEKQLSQARKELET----LRERFSEST 426 >3MPX-A nrPDB Length = 434 Score = 32.4 bits (72), Expect = 0.54, Method: Composition-based stats. Identities = 64/254 (25%), Positives = 106/254 (41%), Gaps = 16/254 (6%) Query: 217 SRASEVERQLSMQVHALKEDFREKNSSTNQHIIR-LESLQAEIKMLSDRKRELEHRLSAT 275 SRA + ++L A E + N + ++R L+ + E + R+ EL LS Sbjct: 21 SRALVIAQELLSSEKAYVEMLQHLNLDFHGAVMRALDDMDHEGRDTLARE-ELRQGLSEL 79 Query: 276 LEENDLLQGTVEELQDRVLILERQGHDKDLQLHQSQLELQEVR--LSYRQLQGKVEELTE 333 +DL QG +EEL++R+ E Q D+ L + Q L + + G L Sbjct: 80 PAIHDLHQGILEELEERLSNWESQQKVADVFLAREQGFDHHATHILQFDRYLG----LLS 135 Query: 334 ERSLQSSAATSTSLLSEIEQSMEAEELEQEREQLRLQLWEAYCQVRYLCSHLRGNDSADS 393 E L S + + E EQS++ Q + L++ + Q + L + N DS Sbjct: 136 ENCLHSPRLAAA--VREFEQSVQGG--SQTAKHRLLRVVQRLFQYQVLLTDYLNNLCPDS 191 Query: 394 AVSTDSSMDESSETSSAKDVPAGSLRTALNDLKRLIQSIVDGVEPTVTLLSVEMTALKEE 453 A D++ S S D S+ N L++L+ I V LL LKE Sbjct: 192 A-EYDNTQGALSLISKVTDRANDSMEQGEN-LQKLVH-IEHSVRGQGDLLQPGREFLKEG 248 Query: 454 RDRLRVTSEDKEPK 467 ++VT +++ P+ Sbjct: 249 -TLMKVTGKNRRPR 261 >5M6U-B nrPDB Length = 724 Score = 32.0 bits (71), Expect = 0.68, Method: Composition-based stats. Identities = 33/147 (22%), Positives = 62/147 (42%), Gaps = 24/147 (16%) Query: 133 QYEQMHKELTDKLEHLEQEKHELRRRFENREGEWEGRVSELETDVKQLQDELERQQLHLR 192 Q +Q+ KE D +E + ++ HE +F+ + E++ L D + E++ ++ + Sbjct: 432 QQDQVVKE--DNIEAVGKKLHEYNTQFQEKSREYD----RLYEDYTRTSQEIQMKRTAI- 484 Query: 193 EADREKTRAVQELSEQNQRLLDQLSRASEVERQLSMQVHALKEDFREKNSSTNQHIIR-L 251 EA E + +E + +R + + K RE N + Q I+ Sbjct: 485 EAFNETIKIFEEQCQTQERYSKEY-------------IEKFK---REGNETEIQRIMHNY 528 Query: 252 ESLQAEIKMLSDRKRELEHRLSATLEE 278 E L++ I + D +R LE L E Sbjct: 529 EKLKSRISEIVDSRRRLEEDLKKQAAE 555 >5XW2-A nrPDB Length = 419 Score = 32.0 bits (71), Expect = 0.70, Method: Composition-based stats. Identities = 29/97 (29%), Positives = 43/97 (44%), Gaps = 11/97 (11%) Query: 93 PPPPTQDPELLSVIRQKEKDLV------LAARLGKALLERN-QDMSRQYEQMHKELTDKL 145 P P T ELLS I ++ L + LG +E +D R +E + L Sbjct: 151 PLPVTVVAELLS-IPSADRHLFEGWMTEIVHSLGDVSMEDAPEDQERIFEAGMAPMRKML 209 Query: 146 EHLEQEKHELRRRFENREGEWEGRVSELETDVKQLQD 182 E+L + E RRR G+ G++ E E D ++L D Sbjct: 210 EYLREHAAECRRR---PRGDLMGKLIEAEVDGRRLTD 243 >5ZSN-B nrPDB Length = 823 Score = 31.6 bits (70), Expect = 0.87, Method: Composition-based stats. Identities = 48/230 (20%), Positives = 95/230 (41%), Gaps = 29/230 (12%) Query: 120 GKALLERNQDMSR-QYEQMHKELTDKLEHLEQEKHELRRRFENREGEWEGRVSELETDVK 178 G +L+ R +R E ++ ++L + +K+ RF+N+E + V E Sbjct: 415 GDSLVPRGSSNARTSVESYEPQVLEQLYYFRYDKYARSCRFKNKEASFTS-VQESCYKYG 473 Query: 179 QLQDELERQQLHLREADREKTRAVQELSEQNQRLLDQLSRASEVE-----RQLSMQVHAL 233 Q D + ++ +D + ++ L+ L+ Q SE + R L + L Sbjct: 474 QTLDLSKNSIFFIKSSDFQHLSFLKCLNLSGN-LISQTLNGSEFQPLAELRYLDFSNNRL 532 Query: 234 K-------EDFREK---NSSTNQHIIRLESLQAEIKMLSDRK---------RELEHRLSA 274 E+ R+ + S+N H + E + + + K ++ S Sbjct: 533 DLLHSTAFEELRKLEVLDISSNSHYFQSEGITHMLNFTKNLKVLQKLMMNDNDISSSTSR 592 Query: 275 TLEENDLLQGTVEELQDRVLILERQGHDKDLQLHQSQLELQEVRLSYRQL 324 T+E L T+E + + +L R G ++ LQL ++ L+L+E+ +S L Sbjct: 593 TMESESLR--TLEFRGNHLDVLWRDGDNRYLQLFKNLLKLEELDISKNSL 640 >4TKO-B nrPDB Length = 358 Score = 31.6 bits (70), Expect = 1.0, Method: Composition-based stats. Identities = 45/202 (22%), Positives = 92/202 (45%), Gaps = 22/202 (10%) Query: 111 KDLVLAARLGKALLERNQDMSRQYEQMHKELTDKLEHLEQEKHELRRRFENREGEWEGRV 170 KDL + G+AL + + YE + L K+ L ++K L + + E + Sbjct: 36 KDLGDYVKRGEALAKLDPTY---YELEKRTLEKKMSALLEKKKALEIKIQKLEKGLHISL 92 Query: 171 SELETDVKQLQDELERQQLHLREADREKTRAVQELSEQNQRLLDQ----LSRASEVERQL 226 S + V+ L+ + E + L + + EK + V+ E+ + L + + EV+ L Sbjct: 93 SAKKLKVESLKKKREALREKLLQVE-EKIKLVKLDWERYKSLFQKGLIPRRKFEEVDTNL 151 Query: 227 SMQVHA---LKEDFREKNSSTNQHIIRLESLQAEIKMLSDRKRELEHRLSATLEENDLLQ 283 + +H L++ +E N+ + +E+ + E K + + K+EL ++LEE Sbjct: 152 KVLLHEREYLEKSIQEINTEIKRAKKGIENARNEFKTIEELKKEL-----SSLEEE---- 202 Query: 284 GTVEELQDRVLILERQGHDKDL 305 ++ L++R+ E++ D L Sbjct: 203 --IKSLKERIKTAEQKIKDTVL 222 >5VY8-A nrPDB Length = 908 Score = 31.3 bits (69), Expect = 1.1, Method: Composition-based stats. Identities = 37/127 (29%), Positives = 60/127 (47%), Gaps = 23/127 (18%) Query: 109 KEKDLVLAARLGKALLERNQDMSRQYEQMHKELTDKLEHLEQEKHELRRRF-ENREGEWE 167 KE+ L L KAL ER++D + K K L++E LR+R+ E + G E Sbjct: 417 KERQLQLIQVEIKAL-ERDEDADSTTKDRLKLARQKEASLQEELEPLRQRYNEEKHGHEE 475 Query: 168 GRVSELETDVKQLQDELERQQLHLREADRE---------KTRAVQELSEQNQRLLDQLSR 218 T K+ DELE + L +A+R + A+ ++ +Q ++L DQ+ Sbjct: 476 ------LTQAKKKLDELENKAL---DAERRYDTATAADLRYFAIPDIKKQIEKLEDQV-- 524 Query: 219 ASEVERQ 225 +E ER+ Sbjct: 525 -AEEERR 530 Score = 30.5 bits (67), Expect = 2.1, Method: Composition-based stats. Identities = 35/151 (23%), Positives = 66/151 (43%), Gaps = 22/151 (14%) Query: 139 KELTDKLEHLEQEKHELR--RRFENREGEWEGRVSELETDVKQLQDELERQQLHLREADR 196 +EL K L+ + E++ R E+ + + R+ LQ+ELE LR+ Sbjct: 412 EELDSKERQLQLIQVEIKALERDEDADSTTKDRLKLARQKEASLQEELEP----LRQRYN 467 Query: 197 EKTRAVQELSEQNQRLLDQLSRASEVERQLSMQVHALKEDFREKNSSTNQHIIRLESLQA 256 E+ +EL++ ++L + ++A + ER+ A D R + ++ Sbjct: 468 EEKHGHEELTQAKKKLDELENKALDAERRYDTATAA---DLR---------YFAIPDIKK 515 Query: 257 EIKMLSDRKRELEHRLSATLEENDLLQGTVE 287 +I+ L D+ E E R A N ++Q V+ Sbjct: 516 QIEKLEDQVAEEERRAGA----NSMIQNVVD 542 >4UTP-A nrPDB Length = 314 Score = 31.3 bits (69), Expect = 1.2, Method: Composition-based stats. Identities = 14/45 (31%), Positives = 25/45 (55%) Query: 110 EKDLVLAARLGKALLERNQDMSRQYEQMHKELTDKLEHLEQEKHE 154 E ++ A + K L ++ + YE+ KE TDKL+ L++E + Sbjct: 145 ENGIIFAKNIAKQLSAKDPNNKEFYEKNLKEYTDKLDKLDKESKD 189 >3ZK8-A nrPDB Length = 278 Score = 31.3 bits (69), Expect = 1.2, Method: Composition-based stats. Identities = 14/45 (31%), Positives = 25/45 (55%) Query: 110 EKDLVLAARLGKALLERNQDMSRQYEQMHKELTDKLEHLEQEKHE 154 E ++ A + K L ++ + YE+ KE TDKL+ L++E + Sbjct: 114 ENGIIFAKNIAKQLSAKDPNNKEFYEKNLKEYTDKLDKLDKESKD 158 >5MRE-R nrPDB Length = 337 Score = 30.9 bits (68), Expect = 1.6, Method: Composition-based stats. Identities = 36/150 (24%), Positives = 70/150 (46%), Gaps = 19/150 (12%) Query: 237 FREKNSSTNQHIIRLESLQAEIKMLSDRKRELEHRLSATLEENDLLQGTVEELQDRVLIL 296 ++E+NS + + + ++ ++++ +++EL+ +LS L + L EL LI Sbjct: 107 YKEENSISRKDYLAKPNILKQLEVRESKRKELQDKLSKVLRDELKLDIKDIELATSYLIR 166 Query: 297 ER----QGHD-KDLQLHQSQLELQEVRLSYRQLQGKVEELTEERS--------LQSSAAT 343 R G+ +D + + +E RL R+ E+L+E S L SS + Sbjct: 167 VRASLKNGYPIEDARFNSRYYLKEEERLKARRESWTNEKLSESLSKIDECSDLLNSSTSF 226 Query: 344 STSLLSEIEQSMEAEELEQEREQLRLQLWE 373 + L E+ Q + EQE++ L+ +L E Sbjct: 227 NNKL--ELHQYIS----EQEKQALKAKLLE 250 >4N78-D nrPDB Length = 559 Score = 30.9 bits (68), Expect = 1.8, Method: Composition-based stats. Identities = 26/90 (28%), Positives = 38/90 (42%), Gaps = 14/90 (15%) Query: 129 DMSRQYEQMHKELTDKLEHLEQEKHELRRRFENREGEWEGRVSELETDVKQL---QDELE 185 ++ RQ + K D L E H F R + RV L V QL ++EL Sbjct: 36 NIIRQLSSLSKYAEDIFGELFNEAHS----FSFRVNSLQERVDRLSVSVTQLDPKEEELS 91 Query: 186 RQQLHLREADREKTRAVQELSEQNQRLLDQ 215 Q + +R+A R T Q+Q+L D+ Sbjct: 92 LQDITMRKAFRSSTI-------QDQQLFDR 114 >5WLC-SM nrPDB Length = 290 Score = 30.9 bits (68), Expect = 1.8, Method: Composition-based stats. Identities = 26/80 (32%), Positives = 42/80 (52%), Gaps = 13/80 (16%) Query: 295 ILERQGHDKDLQLHQSQLELQEVRLSY-RQL------QGKV--EELTEERSLQSSAATST 345 +L RQ ++ L++ ELQ+ +L RQ+ QGK +EL E+ SLQ Sbjct: 1 MLRRQARERREYLYRKAQELQDSQLQQKRQIIKQALAQGKPLPKELAEDESLQKDFRYDQ 60 Query: 346 SLLSEIEQSMEAEELEQERE 365 SL ++S EA++L+ + E Sbjct: 61 SL----KESEEADDLQVDDE 76 >5CWS-E nrPDB Length = 247 Score = 30.5 bits (67), Expect = 1.8, Method: Composition-based stats. Identities = 31/116 (26%), Positives = 54/116 (46%), Gaps = 19/116 (16%) Query: 113 LVLAARL------GKALLERNQDMSRQYEQMHKELTD-----KLEHLEQEKHELRRRFE- 160 L LAAR+ G AL ++ ++ +Q+ K L D +LE L LR E Sbjct: 131 LHLAARVQVLRNRGYALSGDEDELKQKLQQIDKTLNDPAQGSRLEELWSRLIVLRGYAED 190 Query: 161 -----NREG--EWEGRVSELETDVKQLQDELERQQLHLREADREKTRAVQELSEQN 209 N+ G E +G E+E K++ ++ ++Q HL++ E + +E +Q+ Sbjct: 191 LKDQINQAGITESDGLGEEIEAKAKKILEDYDKQLQHLKKQVEEAKKDFEEWEKQH 246 >3FHN-A nrPDB Length = 706 Score = 30.1 bits (66), Expect = 2.6, Method: Composition-based stats. Identities = 32/137 (23%), Positives = 60/137 (43%), Gaps = 19/137 (13%) Query: 303 KDLQLHQSQLELQEVRLSYRQLQGKVE-----ELTEERSLQSSAATSTSLLSEIEQSMEA 357 K+ +L+Q+ +LQ V YR+++ +LT+ + + + SL +E E Sbjct: 455 KEQELYQTMAKLQHVNFVYRKIKSLSSNFIFIQLTDIVN-STESKKYNSLFQNVENDYEK 513 Query: 358 EELEQEREQL--RLQLWEAYCQVRYLCSHLRGNDSADSAVSTDSSMDESSETSSAKDVPA 415 + + R+Q + L LR + + + S+DE+ SS VP+ Sbjct: 514 AMSTDMQNSIVHRIQ--------KLLKETLRNYFKISTWSTLEMSVDENIGPSS---VPS 562 Query: 416 GSLRTALNDLKRLIQSI 432 L ++N L+RLI + Sbjct: 563 AELVNSINVLRRLINKL 579 >6CW5-A nrPDB Length = 332 Score = 30.1 bits (66), Expect = 2.8, Method: Composition-based stats. Identities = 20/66 (30%), Positives = 30/66 (45%) Query: 8 LAGRASAPAEPDSACCMELPAGAGDAVRSPATAAALVSFPGGPGELELALEEELALLAAG 67 + GRA + D + L AGA + SP +L ++ + E+ L LA L A Sbjct: 100 VTGRAVIQSAADGENSIVLHAGANYYLPSPTPTTSLATYTHLLVQNEVPLSSTLAYLTAA 159 Query: 68 ERSSEP 73 +SS P Sbjct: 160 GQSSPP 165 >5EIX-A nrPDB Length = 741 Score = 30.1 bits (66), Expect = 3.1, Method: Composition-based stats. Identities = 43/203 (21%), Positives = 92/203 (45%), Gaps = 32/203 (15%) Query: 177 VKQLQDELERQQLHLREADREKTRAVQELSEQNQRLLDQLSRASEVERQLSMQVHALKED 236 ++Q+ ++ ++L + + R+ E +N L + R++ V+ + M H Sbjct: 512 LEQIAAQMRNKKLPMVDDLRD------ESDHENPTRLVIVPRSNRVDMEQVMN-HLFATT 564 Query: 237 FREKNSSTNQHIIRLE---SLQAEIKMLSD--------RKRELEHRLSATLEENDLLQGT 285 EK+ N ++I L+ +++ +++LS+ +R L HRL L+ +L+G Sbjct: 565 DLEKSYRINLNMIGLDGRPAVKNLLEILSEWLVFRRDTVRRRLNHRLEKVLKRLHILEG- 623 Query: 286 VEELQDRVLILERQGHDKDLQLHQSQLELQEVRLSYRQLQGKVEELTEERSLQSSAATST 345 L++ D+ +++ +++ E + +S + E E L+ A Sbjct: 624 --------LLVAFLNIDEVIEIIRTEDEPKPALMSRFGISETQAEAILELKLRHLAK--- 672 Query: 346 SLLSEIEQSMEAEELEQEREQLR 368 L E++ E ELE+ER+QL+ Sbjct: 673 --LEEMKIRGEQSELEKERDQLQ 693 >3N3Y-A nrPDB Length = 216 Score = 29.7 bits (65), Expect = 3.1, Method: Composition-based stats. Identities = 25/104 (24%), Positives = 49/104 (47%), Gaps = 10/104 (9%) Query: 170 VSELETDVKQLQDELERQQLHLREADREKTRAVQELSEQNQRLLDQLSRASEVERQLSMQ 229 + E+E+ + + LER + L D EK A+ L+ +N R+L SE + + Sbjct: 100 LKEVESFLPLNETNLERAREFLVFVDNEKVNAMSVLALENLRVL-----LSEHNIKNDLA 154 Query: 230 VHALKEDFREK-----NSSTNQHIIRLESLQAEIKMLSDRKREL 268 +A+ E ++ N+ + Q+++ L S +K + D + L Sbjct: 155 KYAMPESYKTHLAYSINARSLQNLLTLRSSNKALKEMQDLAKAL 198 >3R6N-A nrPDB Length = 450 Score = 29.7 bits (65), Expect = 3.3, Method: Composition-based stats. Identities = 42/204 (20%), Positives = 90/204 (44%), Gaps = 29/204 (14%) Query: 186 RQQLHLREADREKTRAVQELSEQNQRLL-------DQLSRASEVERQLSMQVHALKE--- 235 R QL +AD + A+ +L E+ + LL D L + + + S ++ + + Sbjct: 55 RWQLDKIKADLREKSAIYQLEEEYENLLKASFERMDHLRQLQNIIQATSREIMWINDCEE 114 Query: 236 -----DFREKNSSTNQH----IIRLESLQAEIKMLSDRKRELEHRLSATLEENDLLQGTV 286 D+ +KN++ Q IR+ L+ + K L+ K+E + + +D ++ + Sbjct: 115 EELLYDWSDKNTNIAQKQEAFSIRMSQLEVKEKELNKLKQESDQLVLNQHPASDKIEAYM 174 Query: 287 EELQDRVLILERQGHDKDLQLHQSQLELQ---EVRLSYRQLQGKVEELTEERSLQSSAAT 343 + LQ + + + D+ L ++ Q E + + L+G + + ++ + Sbjct: 175 DTLQTQWSWILQITKCIDVHLKENAAYFQFFEEAQSTEAYLKGLQDSIRKKYPCDKNMPL 234 Query: 344 STSLLSEIEQSMEAEELEQEREQL 367 LL +I +ELE+ERE++ Sbjct: 235 Q-HLLEQI------KELEKEREKI 251 >3P8C-D nrPDB Length = 279 Score = 29.7 bits (65), Expect = 3.6, Method: Composition-based stats. Identities = 24/83 (28%), Positives = 36/83 (43%), Gaps = 7/83 (8%) Query: 129 DMSRQYEQMHKELTDKLEHLEQEKHELRRRFENREGEWEGRVSELETDVKQL---QDELE 185 ++ RQ + K D L E H F R + RV L V QL ++EL Sbjct: 36 NIIRQLSSLSKYAEDIFGELFNEAHS----FSFRVNSLQERVDRLSVSVTQLDPKEEELS 91 Query: 186 RQQLHLREADREKTRAVQELSEQ 208 Q + +R+A R T Q+L ++ Sbjct: 92 LQDITMRKAFRSSTIQDQQLFDR 114 >4L3I-A nrPDB Length = 490 Score = 29.7 bits (65), Expect = 3.9, Method: Composition-based stats. Identities = 44/212 (20%), Positives = 91/212 (42%), Gaps = 15/212 (7%) Query: 172 ELETDVKQLQDELERQQLHLREADREKTRAVQELSEQNQRLLD-------QLSRASEVER 224 E ET + QL+ +L Q +R+ +E+ + ++ L EQ+Q L + + AS Sbjct: 95 EGETTILQLEKDLRTQVELMRKQKKERKQELKLLQEQDQELCEILCMPHYDIDSASVPSL 154 Query: 225 QLSMQVHALKEDFREKNSSTNQHIIRLESLQAEIKMLSDRKRELEHRLSATLEENDLLQG 284 + Q RE +S + + S++ +I + + EL+H + E + + + Sbjct: 155 EELNQFRQHVTTLRETKASRREEFV---SIKRQIILCME---ELDHTPDTSFERDVVCED 208 Query: 285 TVEELQDRVLILERQGHDKDLQLHQSQLE--LQEVRLSYRQLQGKVEELTEERSLQSSAA 342 I Q + L++ +SQ E + +R R+L +++ EER ++ Sbjct: 209 EDAFCLSLENIATLQKLLRQLEMQKSQNEAVCEGLRTQIRELWDRLQIPEEEREAVATIM 268 Query: 343 TSTSLLSEIEQSMEAEELEQEREQLRLQLWEA 374 + + +E + LE+ + Q ++ EA Sbjct: 269 SGSKAKVRKALQLEVDRLEELKMQNMKKVIEA 300 >4BL6-A nrPDB Length = 94 Score = 29.3 bits (64), Expect = 4.5, Method: Composition-based stats. Identities = 22/73 (30%), Positives = 38/73 (52%), Gaps = 1/73 (1%) Query: 454 RDRLRVTSEDKEPKEQLQKAIRDR-DEAIAKKNAVELELAKCKMDMMSLNSQLLDAIQQK 512 R+ LR+ ED L+ R +E + + + + +L + + +LN L A+QQK Sbjct: 20 RNELRLLKEDAATFSSLRAMFAARCEEYVTQVDDLNRQLEAAEEEKKTLNQLLRLAVQQK 79 Query: 513 LNLSQQLEAWQDD 525 L L+Q+LE + D Sbjct: 80 LALTQRLEEMEMD 92 >5D4W-A nrPDB Length = 926 Score = 29.0 bits (63), Expect = 5.3, Method: Composition-based stats. Identities = 18/78 (23%), Positives = 41/78 (52%), Gaps = 6/78 (7%) Query: 432 IVDGVEPTVTLLSVEMTALKEERD-----RLRVTSEDKEPKEQLQKAIRDRDEAIAKKNA 486 I+D +E + L +E+ AL E+D RL +D + E+ + +R++ E ++ Sbjct: 429 IIDSLERRLRQLKIEIHALSREKDEASKARLAQAKQDAQNVEEELRPLREKYER-ERQRG 487 Query: 487 VELELAKCKMDMMSLNSQ 504 ++ AK K++ + + ++ Sbjct: 488 KAIQEAKMKLEALRVKAE 505 >4YC7-B nrPDB Length = 381 Score = 29.0 bits (63), Expect = 5.4, Method: Composition-based stats. Identities = 39/165 (23%), Positives = 69/165 (41%), Gaps = 21/165 (12%) Query: 267 ELEHRLSATLEENDLLQGTVEELQDRVLILERQGHDKDLQL--HQSQLELQEVRLSYRQ- 323 ELE R + L +L D+ +L + ++K +L Q + +++ +Y Q Sbjct: 32 ELEERFAIVLNAMNLPP-------DKARLLRQYDNEKKWELICDQERFQVKNPPHTYIQK 84 Query: 324 LQGKVEELTEERSLQSSAATSTSLLSEIEQSMEAEELEQEREQLRLQLWEAYCQVRYLCS 383 L+G ++ + + ST +L E+E S+ + RE L + V YL Sbjct: 85 LKGYLDPAVTRKKFRRRVQESTQVLRELEISLRTNHIGWVREFLNEENKGLDVLVEYL-- 142 Query: 384 HLRGNDSADSAVSTD-SSMDESSETSSAKDVPAGSLRTALNDLKR 427 A AV+ D S++ + E+S K P ++ DL R Sbjct: 143 -----SFAQYAVTFDFESVESTVESSVDKSKP---WSRSIEDLHR 179 >4XA3-A nrPDB Length = 154 Score = 28.6 bits (62), Expect = 7.7, Method: Composition-based stats. Identities = 19/73 (26%), Positives = 35/73 (47%) Query: 302 DKDLQLHQSQLELQEVRLSYRQLQGKVEELTEERSLQSSAATSTSLLSEIEQSMEAEELE 361 D +L + LQ++R++Y + +LT+ S +S E + EELE Sbjct: 20 DPELAQSERTEALQQLRVNYGSFVSEYNDLTKSLSKANSEVAQWRTKYETDAIQRTEELE 79 Query: 362 QEREQLRLQLWEA 374 + +++L +L EA Sbjct: 80 EAKKKLAQRLQEA 92 >4FZS-A nrPDB Length = 224 Score = 28.6 bits (62), Expect = 8.4, Method: Composition-based stats. Identities = 44/209 (21%), Positives = 86/209 (41%), Gaps = 14/209 (6%) Query: 167 EGRVSELETDVKQLQDELERQQLHLREADREKTRAVQELSEQNQRLLDQLSRASEVERQL 226 E R+ +L V+ L + R++L L A K+ A+ SE N L LS+ +EVE ++ Sbjct: 22 EQRLRKLHAVVETLVNH--RKELALNTAQFAKSLAMLGSSEDNTALSRALSQLAEVEEKI 79 Query: 227 SMQVHALKEDFREKNSSTNQHIIRLESLQAEIKMLSDRKRELEHRLSATLEENDLLQGTV 286 Q+H + + N + E L I++L+ + + R+ D Sbjct: 80 E-QLH--------QEQANNDFFLLAELLSDYIRLLAIVRAAFDQRMKTWQRWQDAQATLQ 130 Query: 287 EELQDRVLILERQGHDKDLQLHQSQLELQEVRLSYRQLQGKVEELTEERSLQSSAATSTS 346 ++ + +L DK Q LE + Y + ++ + + ++ S Sbjct: 131 KKREAEARLLWANKPDKLQQAKDEILEWESRVTQYERDFERISTVVRKEVIRFEKEKSKD 190 Query: 347 LLSEIEQSMEAEELEQEREQLRLQLWEAY 375 + + + +E L ++QL + WEA+ Sbjct: 191 FKNHVIKYLET--LLYSQQQLA-KYWEAF 216 >5DFZ-D nrPDB Length = 559 Score = 28.6 bits (62), Expect = 8.6, Method: Composition-based stats. Identities = 26/106 (24%), Positives = 54/106 (50%), Gaps = 12/106 (11%) Query: 161 NR-EGEWEGRVSELETDVKQLQDELERQQLHLREADREKTRA-----VQELSEQNQRLLD 214 NR + E++ + E +T Q +LE Q + E+++EK + + L ++ +RLLD Sbjct: 191 NRLKSEYDDAIKERDT-YAQFLSKLESQNKEISESNKEKQYSHNLSEKENLKKEEERLLD 249 Query: 215 QLSRASEVERQLSMQVHALKE-----DFREKNSSTNQHIIRLESLQ 255 QL R + L ++ L+E + + ++Q+++ L ++Q Sbjct: 250 QLLRLEMTDDDLDGELVRLQEKKVQLENEKLQKLSDQNLMDLNNIQ 295 >5NGM-Al nrPDB Length = 137 Score = 28.2 bits (61), Expect = 9.6, Method: Composition-based stats. Identities = 23/92 (25%), Positives = 41/92 (44%), Gaps = 4/92 (4%) Query: 218 RASEVERQ----LSMQVHALKEDFREKNSSTNQHIIRLESLQAEIKMLSDRKRELEHRLS 273 R S++++ L+ ++ K+ F + NS + + K S ++ RLS Sbjct: 12 RQSKIKKSDSPALNKGFNSKKKKFTDLNSPQKRGVCTRVGTMTPKKPNSALRKYARVRLS 71 Query: 274 ATLEENDLLQGTVEELQDRVLILERQGHDKDL 305 +E N + G LQ+ ++L R G KDL Sbjct: 72 NNIEINAYIPGIGHNLQEHSVVLVRGGRVKDL 103 Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta Posted date: Jan 3, 2023 9:05 PM Number of letters in database: 10,336,785 Number of sequences in database: 36,641 Lambda K H 0.311 0.127 0.342 Lambda K H 0.267 0.0393 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 20,630,847 Number of Sequences: 36641 Number of extensions: 818340 Number of successful extensions: 3602 Number of sequences better than 10.0: 105 Number of HSP's better than 10.0 without gapping: 50 Number of HSP's successfully gapped in prelim test: 190 Number of HSP's that attempted gapping in prelim test: 3311 Number of HSP's gapped (non-prelim): 423 length of query: 577 length of database: 10,336,785 effective HSP length: 102 effective length of query: 475 effective length of database: 6,599,403 effective search space: 3134716425 effective search space used: 3134716425 T: 11 A: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 42 (21.8 bits) S2: 62 (28.6 bits)