MASS: Protein Single-Model Global Quality Assessment by Random Forest and Various Energies

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Email:

Paste a protein model (It should be in a PDB format and the length <= 1000 residues):

Or upload a protein model PDB file:

Methods

MASS global prediction (Random Forest)

Predict

MASS potentials download

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Source code (Perl) for 10 MASS potentials can be downloaded here (3.4Mb).

References

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1. Tong Liu and Zheng Wang. MASS: predict the global qualities of individual protein models using random forests and novel statistical potentials. BMC Bioinformatics (2020) 21:246.

2. Tong Liu and Zheng Wang. SOV_refine: A further refined definition of segment overlap score and its significance for protein structure similarity. Source Code for Biology and Medicine,(2018) 13:1.

Contact

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For any questions or suggestions, please contact:
Dr. Zheng Wang
Department of Computer Science
University of Miami