EGG: Accuracy Estimation of Individual Multimeric Protein Models using Deep Energy-Based Models and Graph Neural Networks

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Models were implemented in Python using PyTorch Geometric. Source code containing our train and test scripts can be downloaded here. Data generated for blind_test can be downloaded here. Data generated for training can be downloaded here. Data generated for validation can be downloaded here. Detailed instructions for running our scripts can be found at the EGG github repository.

Reference

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Andrew Jordan Siciliano, Chenguang Zhao, Tong Liu, and Zheng Wang. EGG: Accuracy Estimation of Individual Multimeric Protein Models using Deep Energy-Based Models and Graph Neural Networks

Contact

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For any questions or suggestions, please contact:
Dr. Zheng Wang
Department of Computer Science
University of Miami