DeepChIA-PET

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DeepChIA-PET is a supervised deep learning method for prediciting ChIA-PET from Hi-C and ChIP-seq. It used a deep dilated residual network to learn the mapping relationships between ChIA-PET and two widely-used methods (Hi-C and ChIP-seq).

Download

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DeepChIA-PET package can be downloaded here (6.6K).

Reference

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1. Tong Liu and Zheng Wang. DeepChIA-PET: Accurately predicting ChIA-PET from Hi-C and ChIP-seq with deep dilated networks. PLoS Comput Biol 19(7): e1011307. https://doi.org/10.1371/journal.pcbi.1011307.

Contact

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For any questions or suggestions, please contact:
Dr. Zheng Wang
Department of Computer Science
University of Miami